Jirí Friml
Friml Group
359 Publications
2024 | Published | Journal Article | IST-REx-ID: 14251 |

H. Tang, K. Lu, Y. Zhang, Y. Cheng, S. Tu, and J. Friml, “Divergence of trafficking and polarization mechanisms for PIN auxin transporters during land plant evolution,” Plant Communications, vol. 5, no. 1. Elsevier, 2024.
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2024 | Published | Journal Article | IST-REx-ID: 14826 |

A. Kuhn et al., “RAF-like protein kinases mediate a deeply conserved, rapid auxin response,” Cell, vol. 187, no. 1. Elsevier, p. 130–148.e17, 2024.
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2024 | Epub ahead of print | Journal Article | IST-REx-ID: 15033 |

M. Adamowski, I. Matijevic, and J. Friml, “Developmental patterning function of GNOM ARF-GEF mediated from the cell periphery,” eLife, vol. 13. eLife Sciences Publications, 2024.
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2023 | Published | Journal Article | IST-REx-ID: 12878
Jiang L, Yao B, Zhang X, Wu L, Fu Q, Zhao Y, Cao Y, Zhu R, Lu X, Huang W, Zhao J, Li K, Zhao S, Han L, Zhou X, Luo C, Zhu H, Yang J, Huang H, Zhu Z, He X, Friml J, Zhang Z, Liu C, Du Y. 2023. Salicylic acid inhibits rice endocytic protein trafficking mediated by OsPIN3t and clathrin to affect root growth. Plant Journal. 115(1), 155–174.
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2023 | Published | Journal Article | IST-REx-ID: 13201 |

Y. Wang et al., “The nitrate transporter NRT2.1 directly antagonizes PIN7-mediated auxin transport for root growth adaptation,” Proceedings of the National Academy of Sciences of the United States of America, vol. 120, no. 25. National Academy of Sciences, 2023.
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2023 | Published | Journal Article | IST-REx-ID: 13209 |

J. Xia et al., “Chemical inhibition of Arabidopsis PIN-FORMED auxin transporters by the anti-inflammatory drug naproxen,” Plant Communications, vol. 4, no. 6. Elsevier , 2023.
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2023 | Published | Journal Article | IST-REx-ID: 13212 |

H. Chen, L. Li, M. Zou, L. Qi, and J. Friml, “Distinct functions of TIR1 and AFB1 receptors in auxin signalling.,” Molecular Plant, vol. 16, no. 7. Elsevier , pp. 1117–1119, 2023.
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2023 | Published | Journal Article | IST-REx-ID: 13213 |

C. Chen et al., “Multi-copper oxidases SKU5 and SKS1 coordinate cell wall formation using apoplastic redox-based reactions in roots,” Plant Physiology, vol. 192, no. 3. American Society of Plant Biologists, pp. 2243–2260, 2023.
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2023 | Published | Journal Article | IST-REx-ID: 13266 |

L. Qi and J. Friml, “Tale of cAMP as a second messenger in auxin signaling and beyond,” New Phytologist, vol. 240, no. 2. Wiley, pp. 489–495, 2023.
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2023 | Published | Journal Article | IST-REx-ID: 14313 |

L. Fiedler and J. Friml, “Rapid auxin signaling: Unknowns old and new,” Current Opinion in Plant Biology, vol. 75, no. 10. Elsevier, 2023.
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2023 | Published | Journal Article | IST-REx-ID: 14339 |

S. Roychoudhry et al., “Antigravitropic PIN polarization maintains non-vertical growth in lateral roots,” Nature Plants, vol. 9. Springer Nature, pp. 1500–1513, 2023.
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2023 | Epub ahead of print | Journal Article | IST-REx-ID: 14447 |

K. Bieleszová et al., “New fluorescent auxin derivatives: anti-auxin activity and accumulation patterns in Arabidopsis thaliana,” Plant Growth Regulation. Springer Nature, 2023.
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2023 | Submitted | Preprint | IST-REx-ID: 14591 |

N. Gnyliukh et al., “Role of dynamin-related proteins 2 and SH3P2 in clathrin-mediated endocytosis in plants,” bioRxiv. .
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2023 | Published | Journal Article | IST-REx-ID: 14709 |

M. Del Bianco, J. Friml, L. Strader, and S. Kepinski, “Auxin research: Creating tools for a greener future,” Journal of Experimental Botany, vol. 74, no. 22. Oxford University Press, pp. 6889–6892, 2023.
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2022 | Published | Journal Article | IST-REx-ID: 12291 |

Friml J, Gallei MC, Gelová Z, Johnson AJ, Mazur E, Monzer A, Rodriguez Solovey L, Roosjen M, Verstraeten I, Živanović BD, Zou M, Fiedler L, Giannini C, Grones P, Hrtyan M, Kaufmann W, Kuhn A, Narasimhan M, Randuch M, Rýdza N, Takahashi K, Tan S, Teplova A, Kinoshita T, Weijers D, Rakusová H. 2022. ABP1–TMK auxin perception for global phosphorylation and auxin canalization. Nature. 609(7927), 575–581.
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2022 | Published | Journal Article | IST-REx-ID: 11489 |

V. Bilanovičová et al., “The hydrophilic loop of Arabidopsis PIN1 auxin efflux carrier harbors hallmarks of an intrinsically disordered protein,” International Journal of Molecular Sciences, vol. 23, no. 11. MDPI, p. 6352, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 11589 |

R. Wang et al., “Constitutive active CPK30 interferes with root growth and endomembrane trafficking in Arabidopsis thaliana,” Frontiers in Plant Science, vol. 13. Frontiers, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12052 |

N. Konstantinova et al., “WAVY GROWTH Arabidopsis E3 ubiquitin ligases affect apical PIN sorting decisions,” Nature Communications, vol. 13. Springer Nature, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12053 |

Z. Tian et al., “Strigolactones act downstream of gibberellins to regulate fiber cell elongation and cell wall thickness in cotton (Gossypium hirsutum),” The Plant Cell, vol. 34, no. 12. Oxford University Press, pp. 4816–4839, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12054 |

Z. Yang et al., “Structural insights into auxin recognition and efflux by Arabidopsis PIN1,” Nature, vol. 609, no. 7927. Springer Nature, pp. 611–615, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12120
H. Xiao et al., “Nitrate availability controls translocation of the transcription factor NAC075 for cell-type-specific reprogramming of root growth,” Developmental Cell, vol. 57, no. 23. Elsevier, p. 2638–2651.e6, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12121 |

J. Zhao et al., “Plant autophagosomes mature into amphisomes prior to their delivery to the central vacuole,” Journal of Cell Biology, vol. 221, no. 12. Rockefeller University Press, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12130 |

J. Huang et al., “Specification of female germline by microRNA orchestrated auxin signaling in Arabidopsis,” Nature Communications, vol. 13. Springer Nature, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12144 |

L. Qi et al., “Adenylate cyclase activity of TIR1/AFB auxin receptors in plants,” Nature, vol. 611, no. 7934. Springer Nature, pp. 133–138, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12239 |

A. J. Johnson et al., “Three-dimensional visualization of planta clathrin-coated vesicles at ultrastructural resolution,” Molecular Plant, vol. 15, no. 10. Elsevier, pp. 1533–1542, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 10016 |

J. Friml, “Fourteen stations of auxin,” Cold Spring Harbor Perspectives in Biology, vol. 14, no. 5. Cold Spring Harbor Laboratory, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 10583 |

S. Struk et al., “Transcriptional analysis in the Arabidopsis roots reveals new regulators that link rac-GR24 treatment with changes in flavonol accumulation, root hair elongation and lateral root density,” Plant & Cell Physiology, vol. 63, no. 1. Oxford University Press, pp. 104–119, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 10717 |

R. Wang et al., “Auxin analog-induced Ca2+ signaling is independent of inhibition of endosomal aggregation in Arabidopsis roots,” Journal of Experimental Botany, vol. 73, no. 8. Oxford Academic, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 10719 |

Z. Yu, F. Zhang, J. Friml, and Z. Ding, “Auxin signaling: Research advances over the past 30 years,” Journal of Integrative Plant Biology, vol. 64, no. 2. Wiley, pp. 371–392, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 10768 |

J. Hajny, S. Tan, and J. Friml, “Auxin canalization: From speculative models toward molecular players,” Current Opinion in Plant Biology, vol. 65, no. 2. Elsevier, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 10841 |

D. Dahhan et al., “Proteomic characterization of isolated Arabidopsis clathrin-coated vesicles reveals evolutionarily conserved and plant-specific components,” Plant Cell, vol. 34, no. 6. Oxford Academic, pp. 2150–2173, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 10888 |

Q. Lu et al., “Proteome-wide cellular thermal shift assay reveals unexpected cross-talk between brassinosteroid and auxin signaling,” Proceedings of the National Academy of Sciences of the United States of America, vol. 119, no. 11. Proceedings of the National Academy of Sciences, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 11723 |

L. Li et al., “RALF1 peptide triggers biphasic root growth inhibition upstream of auxin biosynthesis,” Proceedings of the National Academy of Sciences, vol. 119, no. 31. Proceedings of the National Academy of Sciences, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 10411 |

L. Li, M. C. Gallei, and J. Friml, “Bending to auxin: Fast acid growth for tropisms,” Trends in Plant Science, vol. 27, no. 5. Cell Press, pp. 440–449, 2022.
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2021 | Published | Journal Article | IST-REx-ID: 8582 |

H. Li et al., “Cellular requirements for PIN polar cargo clustering in Arabidopsis thaliana,” New Phytologist, vol. 229, no. 1. Wiley, pp. 351–369, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 8606 |

P. He et al., “GhARF16-1 modulates leaf development by transcriptionally regulating the GhKNOX2-1 gene in cotton,” Plant Biotechnology Journal, vol. 19, no. 3. Wiley, pp. 548–562, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 8608 |

M. Ke et al., “Salicylic acid regulates PIN2 auxin transporter hyper-clustering and root gravitropic growth via Remorin-dependent lipid nanodomain organization in Arabidopsis thaliana,” New Phytologist, vol. 229, no. 2. Wiley, pp. 963–978, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 8824 |

M. Marquès-Bueno et al., “Auxin-regulated reversible inhibition of TMK1 signaling by MAKR2 modulates the dynamics of root gravitropism,” Current Biology, vol. 31, no. 1. Elsevier, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 8992 |

S. Tan, C. Luschnig, and J. Friml, “Pho-view of auxin: Reversible protein phosphorylation in auxin biosynthesis, transport and signaling,” Molecular Plant, vol. 14, no. 1. Elsevier, pp. 151–165, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 8993 |

L. Abas et al., “Naphthylphthalamic acid associates with and inhibits PIN auxin transporters,” PNAS, vol. 118, no. 1. National Academy of Sciences, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 9010 |

K. Ötvös et al., “Modulation of plant root growth by nitrogen source-defined regulation of polar auxin transport,” EMBO Journal, vol. 40, no. 3. Embo Press, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 9189 |

Zhao Y, Wu L, Fu Q, Wang D, Li J, Yao B, Yu S, Jiang L, Qian J, Zhou X, Han L, Zhao S, Ma C, Zhang Y, Luo C, Dong Q, Li S, Zhang L, Jiang X, Li Y, Luo H, Li K, Yang J, Luo Q, Li L, Peng S, Huang H, Zuo Z, Liu C, Wang L, Li C, He X, Friml J, Du Y. 2021. INDITTO2 transposon conveys auxin-mediated DRO1 transcription for rice drought avoidance. Plant, Cell & Environment. 44(6), 1846–1857.
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2021 | Published | Journal Article | IST-REx-ID: 9254 |

Y. Hu et al., “Cell kinetics of auxin transport and activity in Arabidopsis root growth and skewing,” Nature Communications, vol. 12. Springer Nature, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 9288 |

I. El Houari et al., “Seedling developmental defects upon blocking CINNAMATE-4-HYDROXYLASE are caused by perturbations in auxin transport,” New Phytologist, vol. 230, no. 6. Wiley, pp. 2275–2291, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 9290 |

M. Glanc et al., “AGC kinases and MAB4/MEL proteins maintain PIN polarity by limiting lateral diffusion in plant cells,” Current Biology, vol. 31, no. 9. Elsevier, pp. 1918–1930, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 9368 |

W. Kong et al., “mRNA surveillance complex PELOTA-HBS1 eegulates phosphoinositide-sependent protein kinase1 and plant growth,” Plant Physiology, vol. 186, no. 4. American Society of Plant Biologists, pp. 2003–2020, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 9443 |

N. Ruiz-Lopez et al., “Synaptotagmins at the endoplasmic reticulum-plasma membrane contact sites maintain diacylglycerol homeostasis during abiotic stress,” Plant Cell, vol. 33, no. 7. American Society of Plant Biologists, pp. 2431–2453, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 9656 |

H. Han, M. Adamowski, L. Qi, S. Alotaibi, and J. Friml, “PIN-mediated polar auxin transport regulations in plant tropic responses,” New Phytologist, vol. 232, no. 2. Wiley, pp. 510–522, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 9657 |

Gao Z, Chen Z, Cui Y, Ke M, Xu H, Xu Q, Chen J, Li Y, Huang L, Zhao H, Huang D, Mai S, Xu T, Liu X, Li S, Guan Y, Yang W, Friml J, Petrášek J, Zhang J, Chen X. 2021. GmPIN-dependent polar auxin transport is involved in soybean nodule development. Plant Cell. 33(9), 2981–3003.
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2021 | Published | Journal Article | IST-REx-ID: 9887 |

A. J. Johnson et al., “The TPLATE complex mediates membrane bending during plant clathrin-mediated endocytosis,” Proceedings of the National Academy of Sciences, vol. 118, no. 51. National Academy of Sciences, 2021.
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2021 | Published | Book Chapter | IST-REx-ID: 10267
Y. Zhang, L. Li, and J. Friml, “Evaluation of gravitropism in non-seed plants,” in Plant Gravitropism, vol. 2368, E. B. Blancaflor, Ed. Springer Nature, 2021, pp. 43–51.
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2021 | Published | Book Chapter | IST-REx-ID: 10268
L. Hörmayer, J. Friml, and M. Glanc, “Automated time-lapse imaging and manipulation of cell divisions in Arabidopsis roots by vertical-stage confocal microscopy,” in Plant Cell Division, vol. 2382, Humana Press, 2021, pp. 105–114.
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2021 | Published | Journal Article | IST-REx-ID: 10282 |

I. Kashkan et al., “Mutually opposing activity of PIN7 splicing isoforms is required for auxin-mediated tropic responses in Arabidopsis thaliana,” New Phytologist, vol. 233. Wiley, pp. 329–343, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 8931 |

Z. Gelová et al., “Developmental roles of auxin binding protein 1 in Arabidopsis thaliana,” Plant Science, vol. 303. Elsevier, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 9287 |

M. Narasimhan et al., “Systematic analysis of specific and nonspecific auxin effects on endocytosis and trafficking,” Plant Physiology, vol. 186, no. 2. Oxford University Press, pp. 1122–1142, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 10015 |

N. Nikonorova et al., “The Arabidopsis root tip (phospho)proteomes at growth-promoting versus growth-repressing conditions reveal novel root growth regulators,” Cells, vol. 10. MDPI, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 10223 |

L. Li et al., “Cell surface and intracellular auxin signalling for H+ fluxes in root growth,” Nature, vol. 599, no. 7884. Springer Nature, pp. 273–277, 2021.
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2021 | Accepted | Preprint | IST-REx-ID: 10095 |

L. Li et al., “Cell surface and intracellular auxin signalling for H+-fluxes in root growth,” Research Square. .
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2020 | Published | Journal Article | IST-REx-ID: 7582 |

T. R. Moturu et al., “Molecular evolution and diversification of proteins involved in miRNA maturation pathway,” Plants, vol. 9, no. 3. MDPI, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7600 |

S. Tan et al., “The lipid code-dependent phosphoswitch PDK1–D6PK activates PIN-mediated auxin efflux in Arabidopsis,” Nature Plants, vol. 6. Springer Nature, pp. 556–569, 2020.
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2020 | Published | Preprint | IST-REx-ID: 7601 |

Z. Wei et al., “Plasmodesmata-like intercellular connections by plant remorin in animal cells,” bioRxiv. Cold Spring Harbor Laboratory, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7619 |

X. Zhang et al., “Arabidopsis flippases cooperate with ARF GTPase exchange factors to regulate the trafficking and polarity of PIN auxin transporters,” The Plant Cell, vol. 32, no. 5. American Society of Plant Biologists, pp. 1644–1664, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7643 |

H. Han, H. Rakusova, I. Verstraeten, Y. Zhang, and J. Friml, “SCF TIR1/AFB auxin signaling for bending termination during shoot gravitropism,” Plant Physiology, vol. 183, no. 5. American Society of Plant Biologists, pp. 37–40, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7646 |

E. Lee et al., “Rare earth elements induce cytoskeleton-dependent and PI4P-associated rearrangement of SYT1/SYT5 ER-PM contact site complexes in Arabidopsis,” Journal of Experimental Botany, vol. 71, no. 14. Oxford University Press, pp. 3986–3998, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7695 |

J. Wang et al., “High temporal resolution reveals simultaneous plasma membrane recruitment of TPLATE complex subunits,” Plant Physiology, vol. 183, no. 3. American Society of Plant Biologists, pp. 986–997, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7697 |

Y. Zhang, C. Hartinger, X. Wang, and J. Friml, “Directional auxin fluxes in plants by intramolecular domain‐domain co‐evolution of PIN auxin transporters,” New Phytologist, vol. 227, no. 5. Wiley, pp. 1406–1416, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7793 |

A. Kuhn et al., “Direct ETTIN-auxin interaction controls chromatin states in gynoecium development,” eLife, vol. 9. eLife Sciences Publications, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7949 |

Smith S, Zhu S, Joos L, Roberts I, Nikonorova N, Vu L, Stes E, Cho H, Larrieu A, Xuan W, Goodall B, van de Cotte B, Waite J, Rigal A, R Harborough S, Persiau G, Vanneste S, Kirschner G, Vandermarliere E, Martens L, Stahl Y, Audenaert D, Friml J, Felix G, Simon R, Bennett M, Bishopp A, De Jaeger G, Ljung K, Kepinski S, Robert S, Nemhauser J, Hwang I, Gevaert K, Beeckman T, De Smet I. 2020. The CEP5 peptide promotes abiotic stress tolerance, as revealed by quantitative proteomics, and attenuates the AUX/IAA equilibrium in Arabidopsis. Molecular & Cellular Proteomics. 19(8), 1248–1262.
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2020 | Published | Journal Article | IST-REx-ID: 8002 |

L. Hörmayer, J. C. Montesinos López, P. Marhavá, E. Benková, S. Yoshida, and J. Friml, “Wounding-induced changes in cellular pressure and localized auxin signalling spatially coordinate restorative divisions in roots,” Proceedings of the National Academy of Sciences, vol. 117, no. 26. Proceedings of the National Academy of Sciences, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 8138 |

J. Zhang et al., “Strigolactones inhibit auxin feedback on PIN-dependent auxin transport canalization,” Nature Communications, vol. 11, no. 1. Springer Nature, p. 3508, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 8139 |

A. J. Johnson et al., “Experimental toolbox for quantitative evaluation of clathrin-mediated endocytosis in the plant model Arabidopsis,” Journal of Cell Science, vol. 133, no. 15. The Company of Biologists, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 8337 |

I. Antoniadi et al., “Cell-surface receptors enable perception of extracellular cytokinins,” Nature Communications, vol. 11. Springer Nature, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 8607 |

D. Liu et al., “Endocytosis of BRASSINOSTEROID INSENSITIVE1 is partly driven by a canonical tyrosine-based Motif,” Plant Cell, vol. 32, no. 11. American Society of Plant Biologists, pp. 3598–3612, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 8721 |

J. Hajny et al., “Receptor kinase module targets PIN-dependent auxin transport during canalization,” Science, vol. 370, no. 6516. American Association for the Advancement of Science, pp. 550–557, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 8943 |

S. Tan et al., “Non-steroidal anti-inflammatory drugs target TWISTED DWARF1-regulated actin dynamics and auxin transport-mediated plant development,” Cell Reports, vol. 33, no. 9. Elsevier, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 6997 |

Y. Zhang and J. Friml, “Auxin guides roots to avoid obstacles during gravitropic growth,” New Phytologist, vol. 225, no. 3. Wiley, pp. 1049–1052, 2020.
[Published Version]
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2020 | Published | Journal Article | IST-REx-ID: 7142
M. C. Gallei, C. Luschnig, and J. Friml, “Auxin signalling in growth: Schrödinger’s cat out of the bag,” Current Opinion in Plant Biology, vol. 53, no. 2. Elsevier, pp. 43–49, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7204 |

Y. Li et al., “Root growth adaptation is mediated by PYLs ABA receptor-PP2A protein phosphatase complex,” Advanced Science, vol. 7, no. 3. Wiley, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7427 |

S. Tan et al., “Salicylic acid targets protein phosphatase 2A to attenuate growth in plants,” Current Biology, vol. 30, no. 3. Cell Press, p. 381–395.e8, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7465 |

E. Mazur, M. C. Gallei, M. Adamowski, H. Han, H. S. Robert, and J. Friml, “Clathrin-mediated trafficking and PIN trafficking are required for auxin canalization and vascular tissue formation in Arabidopsis,” Plant Science, vol. 293, no. 4. Elsevier, 2020.
[Published Version]
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2020 | Published | Journal Article | IST-REx-ID: 7490 |

M. Narasimhan et al., “Evolutionarily unique mechanistic framework of clathrin-mediated endocytosis in plants,” eLife, vol. 9. eLife Sciences Publications, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7497 |

Han L, Zhou X, Zhao Y, Zhu S, Wu L, He Y, Ping X, Lu X, Huang W, Qian J, Zhang L, Jiang X, Zhu D, Luo C, Li S, Dong Q, Fu Q, Deng K, Wang X, Wang L, Peng S, Wu J, Li W, Friml J, Zhu Y, He X, Du Y. 2020. Colonization of endophyte Acremonium sp. D212 in Panax notoginseng and rice mediated by auxin and jasmonic acid. Journal of Integrative Plant Biology. 62(9), 1433–1451.
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2020 | Published | Journal Article | IST-REx-ID: 7500 |

E. Mazur, I. Kulik, J. Hajny, and J. Friml, “Auxin canalization and vascular tissue formation by TIR1/AFB-mediated auxin signaling in arabidopsis,” New Phytologist, vol. 226, no. 5. Wiley, pp. 1375–1383, 2020.
[Published Version]
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2020 | Published | Journal Article | IST-REx-ID: 8986 |

Y. Zhang, L. Rodriguez Solovey, L. Li, X. Zhang, and J. Friml, “Functional innovations of PIN auxin transporters mark crucial evolutionary transitions during rise of flowering plants,” Science Advances, vol. 6, no. 50. AAAS, 2020.
[Published Version]
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2019 | Published | Journal Article | IST-REx-ID: 5908 |

E. Lee et al., “Ionic stress enhances ER–PM connectivity via phosphoinositide-associated SYT1 contact site expansion in Arabidopsis,” Proceedings of the National Academy of Sciences of the United States of America, vol. 116, no. 4. National Academy of Sciences, pp. 1420–1429, 2019.
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2019 | Published | Journal Article | IST-REx-ID: 6023 |

S. Yoshida et al., “A SOSEKI-based coordinate system interprets global polarity cues in arabidopsis,” Nature Plants, vol. 5, no. 2. Springer Nature, pp. 160–166, 2019.
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2019 | Published | Journal Article | IST-REx-ID: 6104
M. Zwiewka et al., “Root adaptation to H2O2-induced oxidative stress by ARF-GEF BEN1- and cytoskeleton-mediated PIN2 trafficking,” Plant and Cell Physiology, vol. 60, no. 2. Oxford University Press, pp. 255–273, 2019.
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2019 | Published | Journal Article | IST-REx-ID: 6259 |

M. Cao et al., “TMK1-mediated auxin signalling regulates differential growth of the apical hook,” Nature, vol. 568. Springer Nature, pp. 240–243, 2019.
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2019 | Published | Journal Article | IST-REx-ID: 6260 |

A. Oochi et al., “Pinstatic acid promotes auxin transport by inhibiting PIN internalization,” Plant Physiology, vol. 180, no. 2. ASPB, pp. 1152–1165, 2019.
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2019 | Published | Journal Article | IST-REx-ID: 6261 |

Y. Wang, Z. Gong, J. Friml, and J. Zhang, “Nitrate modulates the differentiation of root distal stem cells,” Plant Physiology, vol. 180, no. 1. ASPB, pp. 22–25, 2019.
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2019 | Published | Journal Article | IST-REx-ID: 6262 |

H. Rakusová, H. Han, P. Valošek, and J. Friml, “Genetic screen for factors mediating PIN polarization in gravistimulated Arabidopsis thaliana hypocotyls,” The Plant Journal, vol. 98, no. 6. Wiley, pp. 1048–1059, 2019.
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2019 | Published | Journal Article | IST-REx-ID: 6351 |

P. Marhavá, L. Hörmayer, S. Yoshida, P. Marhavý, E. Benková, and J. Friml, “Re-activation of stem cell pathways for pattern restoration in plant wound healing,” Cell, vol. 177, no. 4. Elsevier, p. 957–969.e13, 2019.
[Published Version]
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2019 | Published | Journal Article | IST-REx-ID: 6366 |

J. Bellstaedt et al., “A mobile auxin signal connects temperature sensing in cotyledons with growth responses in hypocotyls,” Plant Physiology, vol. 180, no. 2. ASPB, pp. 757–766, 2019.
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2019 | Published | Journal Article | IST-REx-ID: 6377
Dejonghe W, Sharma I, Denoo B, De Munck S, Lu Q, Mishev K, Bulut H, Mylle E, De Rycke R, Vasileva MK, Savatin DV, Nerinckx W, Staes A, Drozdzecki A, Audenaert D, Yperman K, Madder A, Friml J, Van Damme D, Gevaert K, Haucke V, Savvides SN, Winne J, Russinova E. 2019. Disruption of endocytosis through chemical inhibition of clathrin heavy chain function. Nature Chemical Biology. 15(6), 641–649.
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2019 | Published | Journal Article | IST-REx-ID: 6504 |

Y. Zhang et al., “Auxin-mediated statolith production for root gravitropism,” New Phytologist, vol. 224, no. 2. Wiley, pp. 761–774, 2019.
[Submitted Version]
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2019 | Published | Journal Article | IST-REx-ID: 6611 |

M. Glanc, M. Fendrych, and J. Friml, “PIN2 polarity establishment in arabidopsis in the absence of an intact cytoskeleton,” Biomolecules, vol. 9, no. 6. MDPI, 2019.
[Published Version]
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2019 | Published | Journal Article | IST-REx-ID: 6778 |

Y. Zhang, G. Xiao, X. Wang, X. Zhang, and J. Friml, “Evolution of fast root gravitropism in seed plants,” Nature Communications, vol. 10. Springer Nature, 2019.
[Published Version]
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2019 | Published | Journal Article | IST-REx-ID: 6943 |

L. Hörmayer and J. Friml, “Targeted cell ablation-based insights into wound healing and restorative patterning,” Current Opinion in Plant Biology, vol. 52. Elsevier, pp. 124–130, 2019.
[Published Version]
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2019 | Published | Journal Article | IST-REx-ID: 6999 |

D. Huang et al., “Salicylic acid-mediated plasmodesmal closure via Remorin-dependent lipid organization,” Proceedings of the National Academy of Sciences of the United States of America, vol. 116, no. 42. Proceedings of the National Academy of Sciences, pp. 21274–21284, 2019.
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2019 | Published | Journal Article | IST-REx-ID: 7106 |

R. Skokan et al., “PIN-driven auxin transport emerged early in streptophyte evolution,” Nature Plants, vol. 5, no. 11. Springer Nature, pp. 1114–1119, 2019.
[Submitted Version]
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2019 | Published | Journal Article | IST-REx-ID: 7143 |

S. A. Sinclair and J. Friml, “Defying gravity: a plant’s quest for moisture,” Cell Research, vol. 29. Springer Nature, pp. 965–966, 2019.
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2019 | Published | Journal Article | IST-REx-ID: 6627 |

M. Adamowski, L. Li, and J. Friml, “Reorientation of cortical microtubule arrays in the hypocotyl of arabidopsis thaliana is induced by the cell growth process and independent of auxin signaling,” International Journal of Molecular Sciences, vol. 20, no. 13. MDPI, 2019.
[Published Version]
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2018 | Published | Book Chapter | IST-REx-ID: 411
M. Karampelias, R. Tejos, J. Friml, and S. Vanneste, “Optimized whole mount in situ immunolocalization for Arabidopsis thaliana root meristems and lateral root primordia,” in Root Development. Methods and Protocols, vol. 1761, D. Ristova and E. Barbez, Eds. Springer, 2018, pp. 131–143.
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2018 | Published | Journal Article | IST-REx-ID: 412 |

M. Adamowski, M. Narasimhan, U. Kania, M. Glanc, G. De Jaeger, and J. Friml, “A functional study of AUXILIN LIKE1 and 2 two putative clathrin uncoating factors in Arabidopsis,” The Plant Cell, vol. 30, no. 3. American Society of Plant Biologists, pp. 700–716, 2018.
[Published Version]
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2018 | Published | Journal Article | IST-REx-ID: 428 |

Y. Salanenka et al., “Gibberellin DELLA signaling targets the retromer complex to redirect protein trafficking to the plasma membrane,” PNAS, vol. 115, no. 14. National Academy of Sciences, pp. 3716–3721, 2018.
[Published Version]
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2018 | Published | Journal Article | IST-REx-ID: 449 |

T. Prat et al., “WRKY23 is a component of the transcriptional network mediating auxin feedback on PIN polarity,” PLoS Genetics, vol. 14, no. 1. Public Library of Science, 2018.
[Published Version]
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2018 | Published | Journal Article | IST-REx-ID: 462 |

L. Fan et al., “NHX antiporters regulate the pH of endoplasmic reticulum and auxin-mediated development,” Plant, Cell and Environment, vol. 41. Wiley-Blackwell, pp. 850–864, 2018.
[Submitted Version]
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2018 | Published | Journal Article | IST-REx-ID: 5673 |

M. Glanc, M. Fendrych, and J. Friml, “Mechanistic framework for cell-intrinsic re-establishment of PIN2 polarity after cell division,” Nature Plants, vol. 4, no. 12. Nature Research, pp. 1082–1088, 2018.
[Submitted Version]
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2018 | Published | Journal Article | IST-REx-ID: 913 |

R. Tejos, C. Rodríguez Furlán, M. Adamowski, M. Sauer, L. Norambuena, and J. Friml, “PATELLINS are regulators of auxin mediated PIN1 relocation and plant development in Arabidopsis thaliana,” Journal of Cell Science, vol. 131, no. 2. Company of Biologists, 2018.
[Published Version]
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2018 | Published | Journal Article | IST-REx-ID: 14 |

S. Hille, M. Akhmanova, M. Glanc, A. J. Johnson, and J. Friml, “Relative contribution of PIN-containing secretory vesicles and plasma membrane PINs to the directed auxin transport: Theoretical estimation,” International Journal of Molecular Sciences, vol. 19, no. 11. MDPI, 2018.
[Published Version]
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2018 | Published | Journal Article | IST-REx-ID: 146 |

C. L. Shi et al., “The dynamics of root cap sloughing in Arabidopsis is regulated by peptide signalling,” Nature Plants, vol. 4, no. 8. Nature Publishing Group, pp. 596–604, 2018.
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2018 | Published | Journal Article | IST-REx-ID: 147 |

U. Kania et al., “The inhibitor Endosidin 4 targets SEC7 domain-type ARF GTPase exchange factors and interferes with sub cellular trafficking in eukaryotes,” The Plant Cell, vol. 30, no. 10. Oxford University Press, pp. 2553–2572, 2018.
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2018 | Published | Journal Article | IST-REx-ID: 148 |

Nishiyama T, Sakayama H, De Vries J, Buschmann H, Saint Marcoux D, Ullrich K, Haas F, Vanderstraeten L, Becker D, Lang D, Vosolsobě S, Rombauts S, Wilhelmsson P, Janitza P, Kern R, Heyl A, Rümpler F, Calderón Villalobos L, Clay J, Skokan R, Toyoda A, Suzuki Y, Kagoshima H, Schijlen E, Tajeshwar N, Catarino B, Hetherington A, Saltykova A, Bonnot C, Breuninger H, Symeonidi A, Radhakrishnan G, Van Nieuwerburgh F, Deforce D, Chang C, Karol K, Hedrich R, Ulvskov P, Glöckner G, Delwiche C, Petrášek J, Van De Peer Y, Friml J, Beilby M, Dolan L, Kohara Y, Sugano S, Fujiyama A, Delaux PM, Quint M, Theissen G, Hagemann M, Harholt J, Dunand C, Zachgo S, Langdale J, Maumus F, Van Der Straeten D, Gould SB, Rensing S. 2018. The Chara genome: Secondary complexity and implications for plant terrestrialization. Cell. 174(2), 448–464.e24.
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2018 | Published | Journal Article | IST-REx-ID: 158 |

H. Robert et al., “Maternal auxin supply contributes to early embryo patterning in Arabidopsis,” Nature Plants, vol. 4, no. 8. Nature Publishing Group, pp. 548–553, 2018.
[Submitted Version]
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2018 | Published | Journal Article | IST-REx-ID: 191 |

P. Grones et al., “PID/WAG-mediated phosphorylation of the Arabidopsis PIN3 auxin transporter mediates polarity switches during gravitropism,” Scientific Reports, vol. 8, no. 1. Springer, 2018.
[Published Version]
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2018 | Published | Journal Article | IST-REx-ID: 192 |

M. Fendrych et al., “Rapid and reversible root growth inhibition by TIR1 auxin signalling,” Nature Plants, vol. 4, no. 7. Springer Nature, pp. 453–459, 2018.
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2018 | Published | Journal Article | IST-REx-ID: 203 |

M. Abbas et al., “Auxin methylation is required for differential growth in Arabidopsis,” PNAS, vol. 115, no. 26. National Academy of Sciences, pp. 6864–6869, 2018.
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2018 | Published | Journal Article | IST-REx-ID: 10881
T. R. Moturu et al., “Molecular evolution and diversification of the SMXL gene family,” Journal of Experimental Botany, vol. 69, no. 9. Oxford University Press, pp. 2367–2378, 2018.
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2018 | Published | Journal Article | IST-REx-ID: 442 |

L. Li, G. Krens, M. Fendrych, and J. Friml, “Real-time analysis of auxin response, cell wall pH and elongation in Arabidopsis thaliana Hypocotyls,” Bio-protocol, vol. 8, no. 1. Bio-protocol, 2018.
[Published Version]
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2017 | Published | Book Chapter | IST-REx-ID: 545 |

E. Mazur and J. Friml, “Vascular tissue development and regeneration in the model plant arabidopsis,” in Plant Engineering, S. Jurić, Ed. InTech, 2017, pp. 113–140.
[Published Version]
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2017 | Research Data | IST-REx-ID: 5565 |

D. von Wangenheim, R. Hauschild, and J. Friml, “Light Sheet Fluorescence microscopy of plant roots growing on the surface of a gel.” Institute of Science and Technology Austria, 2017.
[Published Version]
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2017 | Published | Journal Article | IST-REx-ID: 799 |

S. Kitakura et al., “BEN3/BIG2 ARF GEF is involved in brefeldin a-sensitive trafficking at the trans-Golgi network/early endosome in Arabidopsis thaliana,” Plant and Cell Physiology, vol. 58, no. 10. Oxford University Press, 2017.
[Submitted Version]
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2017 | Published | Journal Article | IST-REx-ID: 1110 |

B. Kuhn et al., “Flavonol-induced changes in PIN2 polarity and auxin transport in the Arabidopsis thaliana rol1-2 mutant require phosphatase activity,” Scientific Reports, vol. 7. Nature Publishing Group, 2017.
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2017 | Published | Journal Article | IST-REx-ID: 1159 |

W. Steenackers et al., “Cis-cinnamic acid is a novel natural auxin efflux inhibitor that promotes lateral root formation,” Plant Physiology, vol. 173, no. 1. American Society of Plant Biologists, pp. 552–565, 2017.
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2017 | Published | Journal Article | IST-REx-ID: 946 |

D. von Wangenheim, R. Hauschild, M. Fendrych, V. Barone, E. Benková, and J. Friml, “Live tracking of moving samples in confocal microscopy for vertically grown roots,” eLife, vol. 6. eLife Sciences Publications, 2017.
[Published Version]
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2017 | Published | Journal Article | IST-REx-ID: 1078 |

D. von Wangenheim, R. Hauschild, and J. Friml, “Light sheet fluorescence microscopy of plant roots growing on the surface of a gel,” Journal of visualized experiments JoVE, vol. 2017, no. 119. Journal of Visualized Experiments, 2017.
[Published Version]
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2016 | Published | Journal Article | IST-REx-ID: 1247 |

M. Karampelias et al., “ROTUNDA3 function in plant development by phosphatase 2A-mediated regulation of auxin transporter recycling,” PNAS, vol. 113, no. 10. National Academy of Sciences, pp. 2768–2773, 2016.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1251 |

Zhu J, Bailly A, Zwiewka M, Sovero V, Di Donato M, Ge P, Oehri J, Aryal B, Hao P, Linnert M, Burgardt N, Lücke C, Weiwad M, Michel M, Weiergräber O, Pollmann S, Azzarello E, Mancuso S, Ferro N, Fukao Y, Hoffmann C, Wedlich Söldner R, Friml J, Thomas C, Geisler M. 2016. TWISTED DWARF1 mediates the action of auxin transport inhibitors on actin cytoskeleton dynamics. Plant Cell. 28(4), 930–948.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1264 |

G. Sancho Andrés et al., “Sorting motifs involved in the trafficking and localization of the PIN1 auxin efflux carrier,” Plant Physiology, vol. 171, no. 3. American Society of Plant Biologists, pp. 1965–1982, 2016.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1274 |

E. Mazur, E. Benková, and J. Friml, “Vascular cambium regeneration and vessel formation in wounded inflorescence stems of Arabidopsis,” Scientific Reports, vol. 6. Nature Publishing Group, 2016.
[Published Version]
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2016 | Published | Journal Article | IST-REx-ID: 1277 |

F. Ortiz Morea et al., “Danger-associated peptide signaling in Arabidopsis requires clathrin,” PNAS, vol. 113, no. 39. National Academy of Sciences, pp. 11028–11033, 2016.
[Preprint]
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2016 | Published | Journal Article | IST-REx-ID: 1344 |

M. Fendrych, J. Leung, and J. Friml, “TIR1 AFB Aux IAA auxin perception mediates rapid cell wall acidification and growth of Arabidopsis hypocotyls,” eLife, vol. 5. eLife Sciences Publications, 2016.
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2016 | Published | Journal Article | IST-REx-ID: 1345 |

G. Molnar, M. Fendrych, and J. Friml, “Plasma membrane: Negative attraction,” Nature Plants, vol. 2. Nature Publishing Group, 2016.
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2016 | Published | Journal Article | IST-REx-ID: 1346 |

Dejonghe W, Kuenen S, Mylle E, Vasileva MK, Keech O, Viotti C, Swerts J, Fendrych M, Ortiz Morea F, Mishev K, Delang S, Scholl S, Zarza X, Heilmann M, Kourelis J, Kasprowicz J, Nguyen L, Drozdzecki A, Van Houtte I, Szatmári A, Majda M, Baisa G, Bednarek S, Robert S, Audenaert D, Testerink C, Munnik T, Van Damme D, Heilmann I, Schumacher K, Winne J, Friml J, Verstreken P, Russinova E. 2016. Mitochondrial uncouplers inhibit clathrin-mediated endocytosis largely through cytoplasmic acidification. Nature Communications. 7, 11710.
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2016 | Published | Journal Article | IST-REx-ID: 1372 |

M. Pernisová et al., “Cytokinins influence root gravitropism via differential regulation of auxin transporter expression and localization in Arabidopsis,” New Phytologist, vol. 212, no. 2. Wiley-Blackwell, pp. 497–509, 2016.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1145 |

T. Nodzyński, S. Vanneste, M. Zwiewka, M. Pernisová, J. Hejátko, and J. Friml, “Enquiry into the topology of plasma membrane localized PIN auxin transport components,” Molecular Plant, vol. 9, no. 11. Cell Press, pp. 1504–1519, 2016.
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2016 | Published | Journal Article | IST-REx-ID: 1147 |

J. Balla et al., “Auxin flow mediated competition between axillary buds to restore apical dominance,” Scientific Reports, vol. 6. Nature Publishing Group, 2016.
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2016 | Published | Journal Article | IST-REx-ID: 1151 |

S. Simonini et al., “A noncanonical auxin sensing mechanism is required for organ morphogenesis in arabidopsis,” Genes and Development, vol. 30, no. 20. Cold Spring Harbor Laboratory Press, pp. 2286–2296, 2016.
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2016 | Published | Journal Article | IST-REx-ID: 1153 |

P. Žádníková et al., “A model of differential growth guided apical hook formation in plants,” Plant Cell, vol. 28, no. 10. American Society of Plant Biologists, pp. 2464–2477, 2016.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1212 |

H. Rakusová, M. Abbas, H. Han, S. Song, H. Robert, and J. Friml, “Termination of shoot gravitropic responses by auxin feedback on PIN3 polarity,” Current Biology, vol. 26, no. 22. Cell Press, pp. 3026–3032, 2016.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1221 |

J. Michalko, M. Glanc, C. Perrot Rechenmann, and J. Friml, “Strong morphological defects in conditional Arabidopsis abp1 knock-down mutants generated in absence of functional ABP1 protein,” F1000 Research , vol. 5. F1000 Research, 2016.
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2016 | Published | Journal Article | IST-REx-ID: 1410 |

J. Ugalde et al., “Phosphatidylinositol 4-phosphate 5-kinases 1 and 2 are involved in the regulation of vacuole morphology during Arabidopsis thaliana pollen development,” Plant Science, vol. 250. Elsevier, pp. 10–19, 2016.
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2016 | Published | Journal Article | IST-REx-ID: 1417 |

S. Simon et al., “PIN6 auxin transporter at endoplasmic reticulum and plasma membrane mediates auxin homeostasis and organogenesis in Arabidopsis,” New Phytologist, vol. 211, no. 1. Wiley-Blackwell, pp. 65–74, 2016.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1484 |

X. Chen, S. Wu, Z. Liu, and J. Friml, “Environmental and endogenous control of cortical microtubule orientation,” Trends in Cell Biology, vol. 26, no. 6. Cell Press, pp. 409–419, 2016.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1492 |

P. Marhavý et al., “Targeted cell elimination reveals an auxin-guided biphasic mode of lateral root initiation,” Genes and Development, vol. 30, no. 4. Cold Spring Harbor Laboratory Press, pp. 471–483, 2016.
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2016 | Published | Journal Article | IST-REx-ID: 1641 |

R. Zemová, M. Zwiewka, A. Bielach, H. Robert, and J. Friml, “A forward genetic screen for new regulators of auxin mediated degradation of auxin transport proteins in Arabidopsis thaliana,” Journal of Plant Growth Regulation, vol. 35, no. 2. Springer, pp. 465–476, 2016.
[Preprint]
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2016 | Published | Journal Article | IST-REx-ID: 1081 |

Ł. Łangowski et al., “Cellular mechanisms for cargo delivery and polarity maintenance at different polar domains in plant cells,” Cell Discovery, vol. 2. Nature Publishing Group, 2016.
[Published Version]
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2015 | Published | Journal Article | IST-REx-ID: 1383 |

L. Yu et al., “V-ATPase activity in the TGN/EE is required for exocytosis and recycling in Arabidopsis,” Nature Plants, vol. 1, no. 7. Nature Publishing Group, 2015.
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2015 | Published | Journal Article | IST-REx-ID: 1509 |

J. Michalko, M. Lukacisinova, M. T. Bollenbach, and J. Friml, “Embryo-lethal phenotypes in early abp1 mutants are due to disruption of the neighboring BSM gene,” F1000 Research , vol. 4. F1000 Research, 2015.
[Published Version]
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2015 | Published | Journal Article | IST-REx-ID: 1532
H. Yang, J. Von Der Fecht Bartenbach, J. Friml, J. Lohmann, B. Neuhäuser, and U. Ludewig, “Auxin-modulated root growth inhibition in Arabidopsis thaliana seedlings with ammonium as the sole nitrogen source,” Functional Plant Biology, vol. 42, no. 3. CSIRO, pp. 239–251, 2015.
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2015 | Published | Journal Article | IST-REx-ID: 1534 |

H. Wang et al., “Transcriptional regulation of PIN genes by FOUR LIPS and MYB88 during Arabidopsis root gravitropism,” Nature Communications, vol. 6. Nature Publishing Group, 2015.
[Published Version]
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2015 | Published | Journal Article | IST-REx-ID: 1556 |

Y. Jia et al., “The Arabidopsis thaliana elongator complex subunit 2 epigenetically affects root development,” Journal of Experimental Botany, vol. 66, no. 15. Oxford University Press, pp. 4631–4642, 2015.
[Published Version]
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2015 | Published | Journal Article | IST-REx-ID: 1569 |

S. Doyle et al., “An early secretory pathway mediated by gnom-like 1 and gnom is essential for basal polarity establishment in Arabidopsis thaliana,” PNAS, vol. 112, no. 7. National Academy of Sciences, pp. E806–E815, 2015.
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2015 | Published | Journal Article | IST-REx-ID: 1574 |

Chen Q, Liu Y, Maere S, Lee E, Van Isterdael G, Xie Z, Xuan W, Lucas J, Vassileva V, Kitakura S, Marhavý P, Wabnik KT, Geldner N, Benková E, Le J, Fukaki H, Grotewold E, Li C, Friml J, Sack F, Beeckman T, Vanneste S. 2015. A coherent transcriptional feed-forward motif model for mediating auxin-sensitive PIN3 expression during lateral root development. Nature Communications. 6, 8821.
[Published Version]
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2015 | Published | Journal Article | IST-REx-ID: 1591 |

M. Adamowski and J. Friml, “PIN-dependent auxin transport: Action, regulation, and evolution,” Plant Cell, vol. 27, no. 1. American Society of Plant Biologists, pp. 20–32, 2015.
[Submitted Version]
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2015 | Published | Journal Article | IST-REx-ID: 1640 |

M. Šimášková et al., “Cytokinin response factors regulate PIN-FORMED auxin transporters,” Nature Communications, vol. 6. Nature Publishing Group, 2015.
[Submitted Version]
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2015 | Published | Journal Article | IST-REx-ID: 1819
M. Zwiewka, T. Nodzyński, S. Robert, S. Vanneste, and J. Friml, “Osmotic stress modulates the balance between exocytosis and clathrin mediated endocytosis in Arabidopsis thaliana,” Molecular Plant, vol. 8, no. 8. Elsevier, pp. 1175–1187, 2015.
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2015 | Published | Journal Article | IST-REx-ID: 1871 |

P. Grones and J. Friml, “Auxin transporters and binding proteins at a glance,” Journal of Cell Science, vol. 128, no. 1. Company of Biologists, pp. 1–7, 2015.
[Submitted Version]
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2014 | Published | Journal Article | IST-REx-ID: 1852 |

M. Sassi et al., “An auxin-mediated shift toward growth isotropy promotes organ formation at the shoot meristem in Arabidopsis,” Current Biology, vol. 24, no. 19. Cell Press, pp. 2335–2342, 2014.
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2014 | Published | Journal Article | IST-REx-ID: 1862 |

X. Chen et al., “Inhibition of cell expansion by rapid ABP1-mediated auxin effect on microtubules,” Nature, vol. 516, no. 729. Nature Publishing Group, pp. 90–93, 2014.
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2014 | Published | Journal Article | IST-REx-ID: 1893 |

P. Marhavá et al., “SAC phosphoinositide phosphatases at the tonoplast mediate vacuolar function in Arabidopsis,” PNAS, vol. 111, no. 7. National Academy of Sciences, pp. 2818–2823, 2014.
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2014 | Published | Journal Article | IST-REx-ID: 1897 |

S. Naramoto et al., “Insights into the localization and function of the membrane trafficking regulator GNOM ARF-GEF at the Golgi apparatus in Arabidopsis,” Plant Cell, vol. 26, no. 7. American Society of Plant Biologists, pp. 3062–3076, 2014.
[Submitted Version]
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2014 | Published | Journal Article | IST-REx-ID: 1915
X. Chen and J. Friml, “Rho-GTPase-regulated vesicle trafficking in plant cell polarity,” Biochemical Society Transactions, vol. 42, no. 1. Portland Press, pp. 212–218, 2014.
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2014 | Published | Journal Article | IST-REx-ID: 1917 |

T. Xu et al., “Cell surface ABP1-TMK auxin sensing complex activates ROP GTPase signaling,” Science, vol. 343, no. 6174. American Association for the Advancement of Science, pp. 1025–1028, 2014.
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2014 | Published | Journal Article | IST-REx-ID: 1921 |

R. Tejos et al., “Bipolar plasma membrane distribution of phosphoinositides and their requirement for auxin-mediated cell polarity and patterning in Arabidopsis,” Plant Cell, vol. 26, no. 5. American Society of Plant Biologists, pp. 2114–2128, 2014.
[Submitted Version]
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2014 | Published | Journal Article | IST-REx-ID: 1996 |

O. Hazak, U. Obolski, T. Prat, J. Friml, L. Hadany, and S. Yalovsky, “Bimodal regulation of ICR1 levels generates self-organizing auxin distribution,” PNAS, vol. 111, no. 50. National Academy of Sciences, pp. E5471–E5479, 2014.
[Submitted Version]
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2014 | Published | Journal Article | IST-REx-ID: 2188 |

U. Kania, M. Fendrych, and J. Friml, “Polar delivery in plants; commonalities and differences to animal epithelial cells,” Open Biology, vol. 4, no. APRIL. Royal Society, 2014.
[Published Version]
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2014 | Published | Journal Article | IST-REx-ID: 2223 |

H. Tanaka et al., “BEX1/ARF1A1C is required for BFA-sensitive recycling of PIN auxin transporters and auxin-mediated development in arabidopsis,” Plant and Cell Physiology, vol. 55, no. 4. Oxford University Press, pp. 737–749, 2014.
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2014 | Published | Journal Article | IST-REx-ID: 2240
Gadeyne A, Sánchez Rodríguez C, Vanneste S, Di Rubbo S, Zauber H, Vanneste K, Van Leene J, De Winne N, Eeckhout D, Persiau G, Van De Slijke E, Cannoot B, Vercruysse L, Mayers J, Adamowski M, Kania U, Ehrlich M, Schweighofer A, Ketelaar T, Maere S, Bednarek S, Friml J, Gevaert K, Witters E, Russinova E, Persson S, De Jaeger G, Van Damme D. 2014. The TPLATE adaptor complex drives clathrin-mediated endocytosis in plants. Cell. 156(4), 691–704.
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2014 | Published | Book Chapter | IST-REx-ID: 2245
S. Simon, P. Skůpa, P. Dobrev, J. Petrášek, E. Zažímalová, and J. Friml, “Analyzing the in vivo status of exogenously applied auxins: A HPLC-based method to characterize the intracellularly localized auxin transporters,” in Plant Chemical Genomics, vol. 1056, G. Hicks and S. Robert, Eds. Springer, 2014, pp. 255–264.
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2014 | Published | Journal Article | IST-REx-ID: 2249 |

Y. Chen, K. Aung, J. Rolčík, K. Walicki, J. Friml, and F. Brandizzí, “Inter-regulation of the unfolded protein response and auxin signaling,” Plant Journal, vol. 77, no. 1. Wiley-Blackwell, pp. 97–107, 2014.
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2014 | Published | Journal Article | IST-REx-ID: 2253 |

A. Bailly et al., “Expression of TWISTED DWARF1 lacking its in-plane membrane anchor leads to increased cell elongation and hypermorphic growth,” Plant Journal, vol. 77, no. 1. Wiley-Blackwell, pp. 108–118, 2014.
[Published Version]
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2013 | Published | Journal Article | IST-REx-ID: 2470 |

M. Čovanová, M. Sauer, J. Rychtář, J. Friml, J. Petrášek, and E. Zažímalová, “Overexpression of the auxin binding PROTEIN1 modulates PIN-dependent auxin transport in tobacco cells,” PLoS One, vol. 8, no. 7. Public Library of Science, 2013.
[Published Version]
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2013 | Published | Journal Article | IST-REx-ID: 2472 |

C. Cazzonelli et al., “Role of the Arabidopsis PIN6 auxin transporter in auxin homeostasis and auxin-mediated development,” PLoS One, vol. 8, no. 7. Public Library of Science, 2013.
[Published Version]
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2013 | Published | Journal Article | IST-REx-ID: 2808 |

K. Landberg et al., “The moss physcomitrella patens reproductive organ development is highly organized, affected by the two SHI/STY genes and by the level of active auxin in the SHI/STY expression domain,” Plant Physiology, vol. 162, no. 3. American Society of Plant Biologists, pp. 1406–1419, 2013.
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2013 | Published | Journal Article | IST-REx-ID: 2821 |

E. Remy et al., “A major facilitator superfamily transporter plays a dual role in polar auxin transport and drought stress tolerance in Arabidopsis,” Plant Cell, vol. 25, no. 3. American Society of Plant Biologists, pp. 901–926, 2013.
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2013 | Published | Journal Article | IST-REx-ID: 2827 |

Y. Du et al., “Salicylic acid interferes with clathrin-mediated endocytic protein trafficking,” PNAS, vol. 110, no. 19. National Academy of Sciences, pp. 7946–7951, 2013.
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2013 | Published | Journal Article | IST-REx-ID: 2832 |

H. Tanaka et al., “Cell polarity and patterning by PIN trafficking through early endosomal compartments in arabidopsis thaliana,” PLoS Genetics, vol. 9, no. 5. Public Library of Science, 2013.
[Published Version]
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2013 | Published | Journal Article | IST-REx-ID: 2835 |

H. Yu et al., “Root ultraviolet b-sensitive1/weak auxin response3 is essential for polar auxin transport in arabidopsis,” Plant Physiology, vol. 162, no. 2. American Society of Plant Biologists, pp. 965–976, 2013.
[Submitted Version]
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2013 | Published | Journal Article | IST-REx-ID: 2881 |

H. Li et al., “Cytokinin signaling regulates pavement cell morphogenesis in Arabidopsis,” Cell Research, vol. 23, no. 2. Nature Publishing Group, pp. 290–299, 2013.
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2013 | Published | Journal Article | IST-REx-ID: 2882 |

C. Löfke, M. Zwiewka, I. Heilmann, M. Van Montagu, T. Teichmann, and J. Friml, “Asymmetric gibberellin signaling regulates vacuolar trafficking of PIN auxin transporters during root gravitropism,” PNAS, vol. 110, no. 9. National Academy of Sciences, pp. 3627–3632, 2013.
[Submitted Version]
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2013 | Published | Journal Article | IST-REx-ID: 2883 |

B. Wang et al., “Arabidopsis TWISTED DWARF1 functionally interacts with auxin exporter ABCB1 on the root plasma membrane,” Plant Cell, vol. 25, no. 1. American Society of Plant Biologists, pp. 202–214, 2013.
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2013 | Published | Journal Article | IST-REx-ID: 2919 |

P. Baster et al., “SCF^TIR1 AFB-auxin signalling regulates PIN vacuolar trafficking and auxin fluxes during root gravitropism,” EMBO Journal, vol. 32, no. 2. Wiley-Blackwell, pp. 260–274, 2013.
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2013 | Published | Journal Article | IST-REx-ID: 507 |

S. Kim et al., “Adaptor protein complex 2-mediated endocytosis is crucial for male reproductive organ development in arabidopsis,” Plant Cell, vol. 25, no. 8. American Society of Plant Biologists, pp. 2970–2985, 2013.
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2013 | Published | Journal Article | IST-REx-ID: 509 |

S. Di Rubbo et al., “The clathrin adaptor complex AP-2 mediates endocytosis of brassinosteroid INSENSITIVE1 in arabidopsis,” Plant Cell, vol. 25, no. 8. American Society of Plant Biologists, pp. 2986–2997, 2013.
[Submitted Version]
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2013 | Published | Journal Article | IST-REx-ID: 516 |

B. Bargmann et al., “A map of cell type‐specific auxin responses,” Molecular Systems Biology, vol. 9, no. 1. Nature Publishing Group, 2013.
[Published Version]
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2013 | Published | Journal Article | IST-REx-ID: 831
Péret B, Middleton A, French A, Larrieu A, Bishopp A, Njo M, Wells D, Porco S, Mellor N, Band L, Casimiro I, Kleine Vehn J, Vanneste S, Sairanen I, Mallet R, Sandberg G, Ljung K, Beeckman T, Benková E, Friml J, Kramer E, King J, De Smet I, Pridmore T, Owen M, Bennett M. 2013. Sequential induction of auxin efflux and influx carriers regulates lateral root emergence. Molecular Systems Biology. 9.
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2013 | Published | Journal Article | IST-REx-ID: 2290 |

Y. Boutté et al., “ECHIDNA mediated post Golgi trafficking of auxin carriers for differential cell elongation,” PNAS, vol. 110, no. 40. National Academy of Sciences, pp. 16259–16264, 2013.
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2013 | Published | Journal Article | IST-REx-ID: 2443 |

S. Simon et al., “Defining the selectivity of processes along the auxin response chain: A study using auxin analogues,” New Phytologist, vol. 200, no. 4. Wiley, pp. 1034–1048, 2013.
[Published Version]
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2013 | Published | Journal Article | IST-REx-ID: 2448 |

E. Remy, P. Baster, J. Friml, and P. Duque, “ZIFL1.1 transporter modulates polar auxin transport by stabilizing membrane abundance of multiple PINs in Arabidopsis root tip,” Plant Signaling & Behavior, vol. 8, no. 10. Taylor & Francis, 2013.
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2013 | Published | Journal Article | IST-REx-ID: 10895 |

S. Vanneste and J. Friml, “Calcium: The missing link in auxin action,” Plants, vol. 2, no. 4. MDPI, pp. 650–675, 2013.
[Published Version]
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2012 | Published | Journal Article | IST-REx-ID: 2459 |

M. Zwiewka and J. Friml, “Fluorescence imaging-based forward genetic screens to identify trafficking regulators in plants,” Frontiers in Plant Science, vol. 3, no. May. Frontiers Research Foundation, 2012.
[Published Version]
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2012 | Published | Journal Article | IST-REx-ID: 3104
W. Grunewald et al., “Transcription factor WRKY23 assists auxin distribution patterns during Arabidopsis root development through local control on flavonol biosynthesis,” PNAS, vol. 109, no. 5. National Academy of Sciences, pp. 1554–1559, 2012.
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2012 | Published | Journal Article | IST-REx-ID: 3105
Whitford R, Fernandez A, Tejos R, Pérez A, Kleine Vehn J, Vanneste S, Drozdzecki A, Leitner J, Abas L, Aerts M, Hoogewijs K, Baster P, De Groodt R, Lin Y, Storme V, Van De Peer Y, Beeckman T, Madder A, Devreese B, Luschnig C, Friml J, Hilson P. 2012. GOLVEN secretory peptides regulate auxin carrier turnover during plant gravitropic responses. Developmental Cell. 22(3), 678–685.
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2012 | Published | Journal Article | IST-REx-ID: 3114
Ding Z, Wang B, Moreno I, Dupláková N, Simon S, Carraro N, Reemmer J, Pěnčík A, Chen X, Tejos R, Skůpa P, Pollmann S, Mravec J, Petrášek J, Zažímalová E, Honys D, Rolčík J, Murphy A, Orellana A, Geisler M, Friml J. 2012. ER-localized auxin transporter PIN8 regulates auxin homeostasis and male gametophyte development in Arabidopsis. Nature Communications. 3(AN 941).
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2011 | Published | Journal Article | IST-REx-ID: 3091 |

M. Sauer and J. Friml, “Fleeting hormone cues get stabilized for plant organogenesis,” Molecular Systems Biology, vol. 7. Nature Publishing Group, 2011.
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2011 | Published | Journal Article | IST-REx-ID: 3092 |

K. T. Wabnik, W. Govaerts, J. Friml, and J. Kleine Vehn, “Feedback models for polarized auxin transport: An emerging trend,” Molecular BioSystems, vol. 7, no. 8. Royal Society of Chemistry, pp. 2352–2359, 2011.
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2011 | Published | Journal Article | IST-REx-ID: 3100 |

S. Vanneste et al., “Developmental regulation of CYCA2s contributes to tissue-specific proliferation in Arabidopsis ,” EMBO Journal, vol. 30, no. 16. Wiley-Blackwell, pp. 3430–3441, 2011.
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2011 | Published | Journal Article | IST-REx-ID: 3101 |

M. Zwiewka et al., “The AP 3 adaptor complex is required for vacuolar function in Arabidopsis,” Cell Research, vol. 21, no. 12. Nature Publishing Group, pp. 1711–1722, 2011.
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2011 | Published | Journal Article | IST-REx-ID: 3102
B. Berckmans et al., “Auxin Dependent cell cycle reactivation through transcriptional regulation of arabidopsis E2Fa by lateral organ boundary proteins,” Plant Cell, vol. 23, no. 10. American Society of Plant Biologists, pp. 3671–3683, 2011.
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2011 | Published | Journal Article | IST-REx-ID: 2454 |

H. Li et al., “Phosphorylation switch modulates the interdigitated pattern of PIN1 localization and cell expansion in Arabidopsis leaf epidermis,” Cell Research, vol. 21, no. 6. Nature Publishing Group, pp. 970–978, 2011.
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2010 | Published | Journal Article | IST-REx-ID: 3070
T. Nawy, M. Bayer, J. Mravec, J. Friml, K. Birnbaum, and W. Lukowitz, “The GATA factor HANABA TARANU is required to position the proembryo boundary in the early Arabidopsis embryo,” Developmental Cell, vol. 19, no. 1. Cell Press, pp. 103–113, 2010.
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2010 | Published | Journal Article | IST-REx-ID: 3072 |

W. Grunewald and J. Friml, “The march of the PINs: Developmental plasticity by dynamic polar targeting in plant cells,” EMBO Journal, vol. 29, no. 16. Wiley-Blackwell, pp. 2700–2714, 2010.
[Published Version]
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2010 | Published | Journal Article | IST-REx-ID: 3073
P. Dhonukshe et al., “Plasma membrane-bound AGC3 kinases phosphorylate PIN auxin carriers at TPRXS(N/S) motifs to direct apical PIN recycling,” Development, vol. 137, no. 19. Company of Biologists, pp. 3245–3255, 2010.
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2010 | Published | Journal Article | IST-REx-ID: 3077 |

J. Friml and A. Jones, “Endoplasmic reticulum: The rising compartment in auxin biology,” Plant Physiology, vol. 154, no. 2. American Society of Plant Biologists, pp. 458–462, 2010.
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2010 | Published | Journal Article | IST-REx-ID: 3080
J. Kleine Vehn, Z. Ding, A. Jones, M. Tasaka, M. Morita, and J. Friml, “Gravity induced PIN transcytosis for polarization of auxin fluxes in gravity sensing root cells,” PNAS, vol. 107, no. 51. National Academy of Sciences, pp. 22344–22349, 2010.
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2010 | Published | Journal Article | IST-REx-ID: 2442 |

T. Beeckman and J. Friml, “Nitrate Contra Auxin: Nutrient Sensing by roots,” Developmental Cell, vol. 18, no. 6. Cell Press, pp. 877–878, 2010.
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2009 | Published | Journal Article | IST-REx-ID: 3051 |

D. Weijers and J. Friml, “SnapShot: Auxin signaling and transport,” Cell, vol. 136, no. 6. Cell Press, pp. 1172–1172, 2009.
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2009 | Published | Journal Article | IST-REx-ID: 3052 |

S. Vanneste and J. Friml, “Auxin: A trigger for change in plant development,” Cell, vol. 136, no. 6. Cell Press, pp. 1005–1016, 2009.
[Published Version]
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2009 | Published | Journal Article | IST-REx-ID: 3054
H. Robert and J. Friml, “Auxin and other signals on the move in plants,” Nature Chemical Biology, vol. 5, no. 5. Nature Publishing Group, pp. 325–332, 2009.
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2009 | Published | Journal Article | IST-REx-ID: 3057 |

J. Petrášek and J. Friml, “Auxin transport routes in plant development,” Development, vol. 136, no. 16. Company of Biologists, pp. 2675–2688, 2009.
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2009 | Published | Journal Article | IST-REx-ID: 3059
J. Kleine Vehn et al., “PIN auxin efflux carrier polarity is regulated by PINOID kinase mediated recruitment into GNOM independent trafficking in arabidopsis,” Plant Cell, vol. 21, no. 12. American Society of Plant Biologists, pp. 3839–3849, 2009.
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2009 | Published | Journal Article | IST-REx-ID: 3061 |

P. Křeček et al., “The PIN-FORMED (PIN) protein family of auxin transporters,” Genome Biology, vol. 10, no. 12. BioMed Central, 2009.
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2008 | Published | Journal Article | IST-REx-ID: 3037 |

E. Feraru and J. Friml, “PIN polar targeting,” Plant Physiology, vol. 147, no. 4. American Society of Plant Biologists, pp. 1553–1559, 2008.
[Published Version]
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2008 | Published | Journal Article | IST-REx-ID: 3038
Swarup K, Benková E, Swarup R, Casimiro I, Péret B, Yang Y, Parry G, Nielsen E, De Smet I, Vanneste S, Levesque M, Carrier D, James N, Calvo V, Ljung K, Kramer E, Roberts R, Graham N, Marillonnet S, Patel K, Jones J, Taylor C, Schachtman D, May S, Sandberg G, Benfey P, Friml J, Kerr I, Beeckman T, Laplaze L, Bennett M. 2008. The auxin influx carrier LAX3 promotes lateral root emergence. Nature Cell Biology. 10(8), 946–954.
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2008 | Published | Journal Article | IST-REx-ID: 3040
J. Kleine Vehn, Ł. Łangowski, J. Wiśniewska, P. Dhonukshe, P. Brewer, and J. Friml, “Cellular and molecular requirements for polar PIN targeting and transcytosis in plants,” Molecular Plant, vol. 1, no. 6. Oxford University Press, pp. 1056–1066, 2008.
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2008 | Published | Journal Article | IST-REx-ID: 3041
D. Santelia et al., “Flavonoids redirect PIN mediated polar auxin fluxes during root gravitropic responses,” Journal of Biological Chemistry, vol. 283, no. 45. American Society for Biochemistry and Molecular Biology, pp. 31218–31226, 2008.
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2008 | Published | Journal Article | IST-REx-ID: 3043
J. Kleine Vehn and J. Friml, “Polar targeting and endocytic recycling in auxin-dependent plant development,” Annual Review of Cell and Developmental Biology, vol. 24. Annual Reviews, pp. 447–473, 2008.
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| PubMed | Europe PMC
2007 | Published | Journal Article | IST-REx-ID: 3023
P. Dhonukshe, J. Šamaj, F. Baluška, and J. Friml, “A unifying new model of cytokinesis for the dividing plant and animal cells,” Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology, vol. 29, no. 4. Wiley-Blackwell, pp. 371–381, 2007.
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2007 | Published | Journal Article | IST-REx-ID: 3024
A. Vieten, M. Sauer, P. Brewer, and J. Friml, “Molecular and cellular aspects of auxin-transport-mediated development,” Trends in Plant Science, vol. 12, no. 4. Cell Press, pp. 160–168, 2007.
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2007 | Published | Journal Article | IST-REx-ID: 2451
J. Friml, “Auxin - Universal development signal in plant life,” Živa, vol. 1. CSAV, 2007.
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2006 | Published | Journal Article | IST-REx-ID: 3009 |

T. Paciorek and J. Friml, “Auxin signaling,” Journal of Cell Science, vol. 119, no. 7. Company of Biologists, pp. 1199–1202, 2006.
[Published Version]
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2006 | Published | Journal Article | IST-REx-ID: 3012
Petrášek J, Mravec J, Bouchard R, Blakeslee J, Abas MF, Seifertová D, Wiśniewska J, Tadele Z, Kubeš M, Čovanová M, Dhonukshe P, Skůpa P, Benková E, Perry L, Křeček P, Lee O, Fink G, Geisler M, Murphy A, Luschnig C, Zažímalová E, Friml J. 2006. PIN proteins perform a rate-limiting function in cellular auxin efflux. Science. 312(5775), 914–918.
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2006 | Published | Journal Article | IST-REx-ID: 3016
M. Sauer et al., “Canalization of auxin flow by Aux/IAA-ARF-dependent feedback regulation of PIN polarity,” Genes and Development, vol. 20, no. 20. Cold Spring Harbor Laboratory Press, pp. 2902–2911, 2006.
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2006 | Published | Journal Article | IST-REx-ID: 3018
J. Kleine Vehn, P. Dhonukshe, R. Swarup, M. Bennett, and J. Friml, “Subcellular trafficking of the Arabidopsis auxin influx carrier AUX1 uses a novel pathway distinct from PIN1,” Plant Cell, vol. 18, no. 11. American Society of Plant Biologists, pp. 3171–3181, 2006.
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2006 | Published | Journal Article | IST-REx-ID: 3020
J. Hejátko, I. Blilou, P. Brewer, J. Friml, B. Scheres, and E. Benková, “In situ hybridization technique for mRNA detection in whole mount Arabidopsis samples,” Nature Protocols, vol. 1, no. 4. Nature Publishing Group, pp. 1939–1946, 2006.
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| DOI
2005 | Published | Book Chapter | IST-REx-ID: 2464
J. Friml and J. Wiśniewska, “Auxin as an intercellular signal,” in Intercellular Communication in Plants, vol. 16, A. Fleming, Ed. Wiley-Blackwell, 2005.
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2005 | Published | Journal Article | IST-REx-ID: 3004
D. Weijers et al., “Maintenance of embryonic auxin distribution for apical basal patterning by PIN FORMED dependent auxin transport in Arabidopsis,” Plant Cell, vol. 17, no. 9. American Society of Plant Biologists, pp. 2517–2526, 2005.
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2004 | Published | Journal Article | IST-REx-ID: 2998
M. Duroux, A. Houben, K. Růžička, J. Friml, and K. Grasser, “The chromatin remodelling complex FACT associates with actively transcribed regions of the Arabidopsis genome,” Plant Journal, vol. 40, no. 5. Wiley-Blackwell, pp. 660–671, 2004.
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2003 | Published | Journal Article | IST-REx-ID: 2992
V. Willemsen, J. Friml, M. Grebe, A. Van Den Toorn, K. Palme, and B. Scheres, “Cell polarity and PIN protein positioning in Arabidopsis require STEROL METHYLTRANSFERASE1 function,” Plant Cell, vol. 15, no. 3. American Society of Plant Biologists, pp. 612–625, 2003.
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2002 | Published | Journal Article | IST-REx-ID: 2986
J. Friml, J. Wiśniewska, E. Benková, K. Mendgen, and K. Palme, “Lateral relocation of auxin efflux regulator PIN3 mediates tropism in Arabidopsis,” Nature, vol. 415, no. 6873. Nature Publishing Group, pp. 806–809, 2002.
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2002 | Published | Journal Article | IST-REx-ID: 2987 |

M. Souter et al., “Hydra mutants of Arabidopsis are defective in sterol profiles and auxin and ethylene signaling,” Plant Cell, vol. 14, no. 5. American Society of Plant Biologists, pp. 1017–1031, 2002.
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2002 | Published | Journal Article | IST-REx-ID: 2988
M. Grebe et al., “Cell polarity signaling in Arabidopsis involves a BFA sensitive auxin influx pathway,” Current Biology, vol. 12, no. 4. Cell Press, pp. 329–334, 2002.
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2002 | Published | Journal Article | IST-REx-ID: 2989
J. Friml et al., “AtPIN4 mediates sink-driven auxin gradients and root patterning in Arabidopsis,” Cell, vol. 108, no. 5. Cell Press, pp. 661–673, 2002.
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2001 | Published | Journal Article | IST-REx-ID: 2981 |

A. Molendijk et al., “Arabidopsis thaliana Rop GTPases are localized to tips of root hairs and control polar growth,” EMBO Journal, vol. 20, no. 11. Wiley-Blackwell, pp. 2779–2788, 2001.
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2001 | Published | Journal Article | IST-REx-ID: 2982 |

P. Gil et al., “BIG: A calossin-like protein required for polar auxin transport in Arabidopsis,” Genes and Development, vol. 15, no. 15. Cold Spring Harbor Laboratory Press, pp. 1985–1997, 2001.
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2001 | Published | Journal Article | IST-REx-ID: 2983
N. Geldner, J. Friml, Y. Stierhof, G. Jürgens, and K. Palme, “Auxin transport inhibitors block PIN1 cycling and vesicle trafficking,” Nature, vol. 413, no. 6854. Nature Publishing Group, pp. 425–428, 2001.
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2001 | Published | Journal Article | IST-REx-ID: 2984 |

R. Swarup et al., “Localization of the auxin permease AUX1 suggests two functionally distinct hormone transport pathways operate in the Arabidopsis root apex,” Genes and Development, vol. 15, no. 20. Cold Spring Harbor Laboratory Press, pp. 2648–2653, 2001.
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2001 | Published | Journal Article | IST-REx-ID: 2985
L. Trnková, J. Friml, and O. Dračka, “Elimination voltammetry of adenine and cytosine mixtures,” Bioelectrochemistry, vol. 54, no. 2. Elsevier, pp. 131–136, 2001.
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1995 | Published | Book Chapter | IST-REx-ID: 2465
D. Morris, J. Friml, and E. Zažímalová, “Auxin transport,” in Plant Hormones: Biosynthesis, Signal Transduction, Action!, P. Davies, Ed. Kluwer, 1995, pp. 451–484.
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Grants
359 Publications
2024 | Published | Journal Article | IST-REx-ID: 14251 |

H. Tang, K. Lu, Y. Zhang, Y. Cheng, S. Tu, and J. Friml, “Divergence of trafficking and polarization mechanisms for PIN auxin transporters during land plant evolution,” Plant Communications, vol. 5, no. 1. Elsevier, 2024.
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2024 | Published | Journal Article | IST-REx-ID: 14826 |

A. Kuhn et al., “RAF-like protein kinases mediate a deeply conserved, rapid auxin response,” Cell, vol. 187, no. 1. Elsevier, p. 130–148.e17, 2024.
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2024 | Epub ahead of print | Journal Article | IST-REx-ID: 15033 |

M. Adamowski, I. Matijevic, and J. Friml, “Developmental patterning function of GNOM ARF-GEF mediated from the cell periphery,” eLife, vol. 13. eLife Sciences Publications, 2024.
[Published Version]
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2023 | Published | Journal Article | IST-REx-ID: 12878
Jiang L, Yao B, Zhang X, Wu L, Fu Q, Zhao Y, Cao Y, Zhu R, Lu X, Huang W, Zhao J, Li K, Zhao S, Han L, Zhou X, Luo C, Zhu H, Yang J, Huang H, Zhu Z, He X, Friml J, Zhang Z, Liu C, Du Y. 2023. Salicylic acid inhibits rice endocytic protein trafficking mediated by OsPIN3t and clathrin to affect root growth. Plant Journal. 115(1), 155–174.
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2023 | Published | Journal Article | IST-REx-ID: 13201 |

Y. Wang et al., “The nitrate transporter NRT2.1 directly antagonizes PIN7-mediated auxin transport for root growth adaptation,” Proceedings of the National Academy of Sciences of the United States of America, vol. 120, no. 25. National Academy of Sciences, 2023.
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2023 | Published | Journal Article | IST-REx-ID: 13209 |

J. Xia et al., “Chemical inhibition of Arabidopsis PIN-FORMED auxin transporters by the anti-inflammatory drug naproxen,” Plant Communications, vol. 4, no. 6. Elsevier , 2023.
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2023 | Published | Journal Article | IST-REx-ID: 13212 |

H. Chen, L. Li, M. Zou, L. Qi, and J. Friml, “Distinct functions of TIR1 and AFB1 receptors in auxin signalling.,” Molecular Plant, vol. 16, no. 7. Elsevier , pp. 1117–1119, 2023.
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2023 | Published | Journal Article | IST-REx-ID: 13213 |

C. Chen et al., “Multi-copper oxidases SKU5 and SKS1 coordinate cell wall formation using apoplastic redox-based reactions in roots,” Plant Physiology, vol. 192, no. 3. American Society of Plant Biologists, pp. 2243–2260, 2023.
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2023 | Published | Journal Article | IST-REx-ID: 13266 |

L. Qi and J. Friml, “Tale of cAMP as a second messenger in auxin signaling and beyond,” New Phytologist, vol. 240, no. 2. Wiley, pp. 489–495, 2023.
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2023 | Published | Journal Article | IST-REx-ID: 14313 |

L. Fiedler and J. Friml, “Rapid auxin signaling: Unknowns old and new,” Current Opinion in Plant Biology, vol. 75, no. 10. Elsevier, 2023.
[Submitted Version]
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2023 | Published | Journal Article | IST-REx-ID: 14339 |

S. Roychoudhry et al., “Antigravitropic PIN polarization maintains non-vertical growth in lateral roots,” Nature Plants, vol. 9. Springer Nature, pp. 1500–1513, 2023.
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2023 | Epub ahead of print | Journal Article | IST-REx-ID: 14447 |

K. Bieleszová et al., “New fluorescent auxin derivatives: anti-auxin activity and accumulation patterns in Arabidopsis thaliana,” Plant Growth Regulation. Springer Nature, 2023.
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2023 | Submitted | Preprint | IST-REx-ID: 14591 |

N. Gnyliukh et al., “Role of dynamin-related proteins 2 and SH3P2 in clathrin-mediated endocytosis in plants,” bioRxiv. .
[Preprint]
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2023 | Published | Journal Article | IST-REx-ID: 14709 |

M. Del Bianco, J. Friml, L. Strader, and S. Kepinski, “Auxin research: Creating tools for a greener future,” Journal of Experimental Botany, vol. 74, no. 22. Oxford University Press, pp. 6889–6892, 2023.
[Published Version]
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2022 | Published | Journal Article | IST-REx-ID: 12291 |

Friml J, Gallei MC, Gelová Z, Johnson AJ, Mazur E, Monzer A, Rodriguez Solovey L, Roosjen M, Verstraeten I, Živanović BD, Zou M, Fiedler L, Giannini C, Grones P, Hrtyan M, Kaufmann W, Kuhn A, Narasimhan M, Randuch M, Rýdza N, Takahashi K, Tan S, Teplova A, Kinoshita T, Weijers D, Rakusová H. 2022. ABP1–TMK auxin perception for global phosphorylation and auxin canalization. Nature. 609(7927), 575–581.
[Submitted Version]
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2022 | Published | Journal Article | IST-REx-ID: 11489 |

V. Bilanovičová et al., “The hydrophilic loop of Arabidopsis PIN1 auxin efflux carrier harbors hallmarks of an intrinsically disordered protein,” International Journal of Molecular Sciences, vol. 23, no. 11. MDPI, p. 6352, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 11589 |

R. Wang et al., “Constitutive active CPK30 interferes with root growth and endomembrane trafficking in Arabidopsis thaliana,” Frontiers in Plant Science, vol. 13. Frontiers, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12052 |

N. Konstantinova et al., “WAVY GROWTH Arabidopsis E3 ubiquitin ligases affect apical PIN sorting decisions,” Nature Communications, vol. 13. Springer Nature, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12053 |

Z. Tian et al., “Strigolactones act downstream of gibberellins to regulate fiber cell elongation and cell wall thickness in cotton (Gossypium hirsutum),” The Plant Cell, vol. 34, no. 12. Oxford University Press, pp. 4816–4839, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12054 |

Z. Yang et al., “Structural insights into auxin recognition and efflux by Arabidopsis PIN1,” Nature, vol. 609, no. 7927. Springer Nature, pp. 611–615, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12120
H. Xiao et al., “Nitrate availability controls translocation of the transcription factor NAC075 for cell-type-specific reprogramming of root growth,” Developmental Cell, vol. 57, no. 23. Elsevier, p. 2638–2651.e6, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12121 |

J. Zhao et al., “Plant autophagosomes mature into amphisomes prior to their delivery to the central vacuole,” Journal of Cell Biology, vol. 221, no. 12. Rockefeller University Press, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12130 |

J. Huang et al., “Specification of female germline by microRNA orchestrated auxin signaling in Arabidopsis,” Nature Communications, vol. 13. Springer Nature, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12144 |

L. Qi et al., “Adenylate cyclase activity of TIR1/AFB auxin receptors in plants,” Nature, vol. 611, no. 7934. Springer Nature, pp. 133–138, 2022.
[Submitted Version]
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2022 | Published | Journal Article | IST-REx-ID: 12239 |

A. J. Johnson et al., “Three-dimensional visualization of planta clathrin-coated vesicles at ultrastructural resolution,” Molecular Plant, vol. 15, no. 10. Elsevier, pp. 1533–1542, 2022.
[Published Version]
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2022 | Published | Journal Article | IST-REx-ID: 10016 |

J. Friml, “Fourteen stations of auxin,” Cold Spring Harbor Perspectives in Biology, vol. 14, no. 5. Cold Spring Harbor Laboratory, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 10583 |

S. Struk et al., “Transcriptional analysis in the Arabidopsis roots reveals new regulators that link rac-GR24 treatment with changes in flavonol accumulation, root hair elongation and lateral root density,” Plant & Cell Physiology, vol. 63, no. 1. Oxford University Press, pp. 104–119, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 10717 |

R. Wang et al., “Auxin analog-induced Ca2+ signaling is independent of inhibition of endosomal aggregation in Arabidopsis roots,” Journal of Experimental Botany, vol. 73, no. 8. Oxford Academic, 2022.
[Submitted Version]
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2022 | Published | Journal Article | IST-REx-ID: 10719 |

Z. Yu, F. Zhang, J. Friml, and Z. Ding, “Auxin signaling: Research advances over the past 30 years,” Journal of Integrative Plant Biology, vol. 64, no. 2. Wiley, pp. 371–392, 2022.
[Published Version]
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2022 | Published | Journal Article | IST-REx-ID: 10768 |

J. Hajny, S. Tan, and J. Friml, “Auxin canalization: From speculative models toward molecular players,” Current Opinion in Plant Biology, vol. 65, no. 2. Elsevier, 2022.
[Published Version]
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2022 | Published | Journal Article | IST-REx-ID: 10841 |

D. Dahhan et al., “Proteomic characterization of isolated Arabidopsis clathrin-coated vesicles reveals evolutionarily conserved and plant-specific components,” Plant Cell, vol. 34, no. 6. Oxford Academic, pp. 2150–2173, 2022.
[Preprint]
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2022 | Published | Journal Article | IST-REx-ID: 10888 |

Q. Lu et al., “Proteome-wide cellular thermal shift assay reveals unexpected cross-talk between brassinosteroid and auxin signaling,” Proceedings of the National Academy of Sciences of the United States of America, vol. 119, no. 11. Proceedings of the National Academy of Sciences, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 11723 |

L. Li et al., “RALF1 peptide triggers biphasic root growth inhibition upstream of auxin biosynthesis,” Proceedings of the National Academy of Sciences, vol. 119, no. 31. Proceedings of the National Academy of Sciences, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 10411 |

L. Li, M. C. Gallei, and J. Friml, “Bending to auxin: Fast acid growth for tropisms,” Trends in Plant Science, vol. 27, no. 5. Cell Press, pp. 440–449, 2022.
[Submitted Version]
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2021 | Published | Journal Article | IST-REx-ID: 8582 |

H. Li et al., “Cellular requirements for PIN polar cargo clustering in Arabidopsis thaliana,” New Phytologist, vol. 229, no. 1. Wiley, pp. 351–369, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 8606 |

P. He et al., “GhARF16-1 modulates leaf development by transcriptionally regulating the GhKNOX2-1 gene in cotton,” Plant Biotechnology Journal, vol. 19, no. 3. Wiley, pp. 548–562, 2021.
[Published Version]
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2021 | Published | Journal Article | IST-REx-ID: 8608 |

M. Ke et al., “Salicylic acid regulates PIN2 auxin transporter hyper-clustering and root gravitropic growth via Remorin-dependent lipid nanodomain organization in Arabidopsis thaliana,” New Phytologist, vol. 229, no. 2. Wiley, pp. 963–978, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 8824 |

M. Marquès-Bueno et al., “Auxin-regulated reversible inhibition of TMK1 signaling by MAKR2 modulates the dynamics of root gravitropism,” Current Biology, vol. 31, no. 1. Elsevier, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 8992 |

S. Tan, C. Luschnig, and J. Friml, “Pho-view of auxin: Reversible protein phosphorylation in auxin biosynthesis, transport and signaling,” Molecular Plant, vol. 14, no. 1. Elsevier, pp. 151–165, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 8993 |

L. Abas et al., “Naphthylphthalamic acid associates with and inhibits PIN auxin transporters,” PNAS, vol. 118, no. 1. National Academy of Sciences, 2021.
[Published Version]
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2021 | Published | Journal Article | IST-REx-ID: 9010 |

K. Ötvös et al., “Modulation of plant root growth by nitrogen source-defined regulation of polar auxin transport,” EMBO Journal, vol. 40, no. 3. Embo Press, 2021.
[Published Version]
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2021 | Published | Journal Article | IST-REx-ID: 9189 |

Zhao Y, Wu L, Fu Q, Wang D, Li J, Yao B, Yu S, Jiang L, Qian J, Zhou X, Han L, Zhao S, Ma C, Zhang Y, Luo C, Dong Q, Li S, Zhang L, Jiang X, Li Y, Luo H, Li K, Yang J, Luo Q, Li L, Peng S, Huang H, Zuo Z, Liu C, Wang L, Li C, He X, Friml J, Du Y. 2021. INDITTO2 transposon conveys auxin-mediated DRO1 transcription for rice drought avoidance. Plant, Cell & Environment. 44(6), 1846–1857.
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2021 | Published | Journal Article | IST-REx-ID: 9254 |

Y. Hu et al., “Cell kinetics of auxin transport and activity in Arabidopsis root growth and skewing,” Nature Communications, vol. 12. Springer Nature, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 9288 |

I. El Houari et al., “Seedling developmental defects upon blocking CINNAMATE-4-HYDROXYLASE are caused by perturbations in auxin transport,” New Phytologist, vol. 230, no. 6. Wiley, pp. 2275–2291, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 9290 |

M. Glanc et al., “AGC kinases and MAB4/MEL proteins maintain PIN polarity by limiting lateral diffusion in plant cells,” Current Biology, vol. 31, no. 9. Elsevier, pp. 1918–1930, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 9368 |

W. Kong et al., “mRNA surveillance complex PELOTA-HBS1 eegulates phosphoinositide-sependent protein kinase1 and plant growth,” Plant Physiology, vol. 186, no. 4. American Society of Plant Biologists, pp. 2003–2020, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 9443 |

N. Ruiz-Lopez et al., “Synaptotagmins at the endoplasmic reticulum-plasma membrane contact sites maintain diacylglycerol homeostasis during abiotic stress,” Plant Cell, vol. 33, no. 7. American Society of Plant Biologists, pp. 2431–2453, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 9656 |

H. Han, M. Adamowski, L. Qi, S. Alotaibi, and J. Friml, “PIN-mediated polar auxin transport regulations in plant tropic responses,” New Phytologist, vol. 232, no. 2. Wiley, pp. 510–522, 2021.
[Published Version]
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2021 | Published | Journal Article | IST-REx-ID: 9657 |

Gao Z, Chen Z, Cui Y, Ke M, Xu H, Xu Q, Chen J, Li Y, Huang L, Zhao H, Huang D, Mai S, Xu T, Liu X, Li S, Guan Y, Yang W, Friml J, Petrášek J, Zhang J, Chen X. 2021. GmPIN-dependent polar auxin transport is involved in soybean nodule development. Plant Cell. 33(9), 2981–3003.
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2021 | Published | Journal Article | IST-REx-ID: 9887 |

A. J. Johnson et al., “The TPLATE complex mediates membrane bending during plant clathrin-mediated endocytosis,” Proceedings of the National Academy of Sciences, vol. 118, no. 51. National Academy of Sciences, 2021.
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2021 | Published | Book Chapter | IST-REx-ID: 10267
Y. Zhang, L. Li, and J. Friml, “Evaluation of gravitropism in non-seed plants,” in Plant Gravitropism, vol. 2368, E. B. Blancaflor, Ed. Springer Nature, 2021, pp. 43–51.
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2021 | Published | Book Chapter | IST-REx-ID: 10268
L. Hörmayer, J. Friml, and M. Glanc, “Automated time-lapse imaging and manipulation of cell divisions in Arabidopsis roots by vertical-stage confocal microscopy,” in Plant Cell Division, vol. 2382, Humana Press, 2021, pp. 105–114.
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2021 | Published | Journal Article | IST-REx-ID: 10282 |

I. Kashkan et al., “Mutually opposing activity of PIN7 splicing isoforms is required for auxin-mediated tropic responses in Arabidopsis thaliana,” New Phytologist, vol. 233. Wiley, pp. 329–343, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 8931 |

Z. Gelová et al., “Developmental roles of auxin binding protein 1 in Arabidopsis thaliana,” Plant Science, vol. 303. Elsevier, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 9287 |

M. Narasimhan et al., “Systematic analysis of specific and nonspecific auxin effects on endocytosis and trafficking,” Plant Physiology, vol. 186, no. 2. Oxford University Press, pp. 1122–1142, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 10015 |

N. Nikonorova et al., “The Arabidopsis root tip (phospho)proteomes at growth-promoting versus growth-repressing conditions reveal novel root growth regulators,” Cells, vol. 10. MDPI, 2021.
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2021 | Published | Journal Article | IST-REx-ID: 10223 |

L. Li et al., “Cell surface and intracellular auxin signalling for H+ fluxes in root growth,” Nature, vol. 599, no. 7884. Springer Nature, pp. 273–277, 2021.
[Preprint]
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2021 | Accepted | Preprint | IST-REx-ID: 10095 |

L. Li et al., “Cell surface and intracellular auxin signalling for H+-fluxes in root growth,” Research Square. .
[Preprint]
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2020 | Published | Journal Article | IST-REx-ID: 7582 |

T. R. Moturu et al., “Molecular evolution and diversification of proteins involved in miRNA maturation pathway,” Plants, vol. 9, no. 3. MDPI, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7600 |

S. Tan et al., “The lipid code-dependent phosphoswitch PDK1–D6PK activates PIN-mediated auxin efflux in Arabidopsis,” Nature Plants, vol. 6. Springer Nature, pp. 556–569, 2020.
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2020 | Published | Preprint | IST-REx-ID: 7601 |

Z. Wei et al., “Plasmodesmata-like intercellular connections by plant remorin in animal cells,” bioRxiv. Cold Spring Harbor Laboratory, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7619 |

X. Zhang et al., “Arabidopsis flippases cooperate with ARF GTPase exchange factors to regulate the trafficking and polarity of PIN auxin transporters,” The Plant Cell, vol. 32, no. 5. American Society of Plant Biologists, pp. 1644–1664, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7643 |

H. Han, H. Rakusova, I. Verstraeten, Y. Zhang, and J. Friml, “SCF TIR1/AFB auxin signaling for bending termination during shoot gravitropism,” Plant Physiology, vol. 183, no. 5. American Society of Plant Biologists, pp. 37–40, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7646 |

E. Lee et al., “Rare earth elements induce cytoskeleton-dependent and PI4P-associated rearrangement of SYT1/SYT5 ER-PM contact site complexes in Arabidopsis,” Journal of Experimental Botany, vol. 71, no. 14. Oxford University Press, pp. 3986–3998, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7695 |

J. Wang et al., “High temporal resolution reveals simultaneous plasma membrane recruitment of TPLATE complex subunits,” Plant Physiology, vol. 183, no. 3. American Society of Plant Biologists, pp. 986–997, 2020.
[Preprint]
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2020 | Published | Journal Article | IST-REx-ID: 7697 |

Y. Zhang, C. Hartinger, X. Wang, and J. Friml, “Directional auxin fluxes in plants by intramolecular domain‐domain co‐evolution of PIN auxin transporters,” New Phytologist, vol. 227, no. 5. Wiley, pp. 1406–1416, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7793 |

A. Kuhn et al., “Direct ETTIN-auxin interaction controls chromatin states in gynoecium development,” eLife, vol. 9. eLife Sciences Publications, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7949 |

Smith S, Zhu S, Joos L, Roberts I, Nikonorova N, Vu L, Stes E, Cho H, Larrieu A, Xuan W, Goodall B, van de Cotte B, Waite J, Rigal A, R Harborough S, Persiau G, Vanneste S, Kirschner G, Vandermarliere E, Martens L, Stahl Y, Audenaert D, Friml J, Felix G, Simon R, Bennett M, Bishopp A, De Jaeger G, Ljung K, Kepinski S, Robert S, Nemhauser J, Hwang I, Gevaert K, Beeckman T, De Smet I. 2020. The CEP5 peptide promotes abiotic stress tolerance, as revealed by quantitative proteomics, and attenuates the AUX/IAA equilibrium in Arabidopsis. Molecular & Cellular Proteomics. 19(8), 1248–1262.
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2020 | Published | Journal Article | IST-REx-ID: 8002 |

L. Hörmayer, J. C. Montesinos López, P. Marhavá, E. Benková, S. Yoshida, and J. Friml, “Wounding-induced changes in cellular pressure and localized auxin signalling spatially coordinate restorative divisions in roots,” Proceedings of the National Academy of Sciences, vol. 117, no. 26. Proceedings of the National Academy of Sciences, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 8138 |

J. Zhang et al., “Strigolactones inhibit auxin feedback on PIN-dependent auxin transport canalization,” Nature Communications, vol. 11, no. 1. Springer Nature, p. 3508, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 8139 |

A. J. Johnson et al., “Experimental toolbox for quantitative evaluation of clathrin-mediated endocytosis in the plant model Arabidopsis,” Journal of Cell Science, vol. 133, no. 15. The Company of Biologists, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 8337 |

I. Antoniadi et al., “Cell-surface receptors enable perception of extracellular cytokinins,” Nature Communications, vol. 11. Springer Nature, 2020.
[Published Version]
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2020 | Published | Journal Article | IST-REx-ID: 8607 |

D. Liu et al., “Endocytosis of BRASSINOSTEROID INSENSITIVE1 is partly driven by a canonical tyrosine-based Motif,” Plant Cell, vol. 32, no. 11. American Society of Plant Biologists, pp. 3598–3612, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 8721 |

J. Hajny et al., “Receptor kinase module targets PIN-dependent auxin transport during canalization,” Science, vol. 370, no. 6516. American Association for the Advancement of Science, pp. 550–557, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 8943 |

S. Tan et al., “Non-steroidal anti-inflammatory drugs target TWISTED DWARF1-regulated actin dynamics and auxin transport-mediated plant development,” Cell Reports, vol. 33, no. 9. Elsevier, 2020.
[Published Version]
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2020 | Published | Journal Article | IST-REx-ID: 6997 |

Y. Zhang and J. Friml, “Auxin guides roots to avoid obstacles during gravitropic growth,” New Phytologist, vol. 225, no. 3. Wiley, pp. 1049–1052, 2020.
[Published Version]
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2020 | Published | Journal Article | IST-REx-ID: 7142
M. C. Gallei, C. Luschnig, and J. Friml, “Auxin signalling in growth: Schrödinger’s cat out of the bag,” Current Opinion in Plant Biology, vol. 53, no. 2. Elsevier, pp. 43–49, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7204 |

Y. Li et al., “Root growth adaptation is mediated by PYLs ABA receptor-PP2A protein phosphatase complex,” Advanced Science, vol. 7, no. 3. Wiley, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7427 |

S. Tan et al., “Salicylic acid targets protein phosphatase 2A to attenuate growth in plants,” Current Biology, vol. 30, no. 3. Cell Press, p. 381–395.e8, 2020.
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2020 | Published | Journal Article | IST-REx-ID: 7465 |

E. Mazur, M. C. Gallei, M. Adamowski, H. Han, H. S. Robert, and J. Friml, “Clathrin-mediated trafficking and PIN trafficking are required for auxin canalization and vascular tissue formation in Arabidopsis,” Plant Science, vol. 293, no. 4. Elsevier, 2020.
[Published Version]
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2020 | Published | Journal Article | IST-REx-ID: 7490 |

M. Narasimhan et al., “Evolutionarily unique mechanistic framework of clathrin-mediated endocytosis in plants,” eLife, vol. 9. eLife Sciences Publications, 2020.
[Published Version]
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2020 | Published | Journal Article | IST-REx-ID: 7497 |

Han L, Zhou X, Zhao Y, Zhu S, Wu L, He Y, Ping X, Lu X, Huang W, Qian J, Zhang L, Jiang X, Zhu D, Luo C, Li S, Dong Q, Fu Q, Deng K, Wang X, Wang L, Peng S, Wu J, Li W, Friml J, Zhu Y, He X, Du Y. 2020. Colonization of endophyte Acremonium sp. D212 in Panax notoginseng and rice mediated by auxin and jasmonic acid. Journal of Integrative Plant Biology. 62(9), 1433–1451.
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2020 | Published | Journal Article | IST-REx-ID: 7500 |

E. Mazur, I. Kulik, J. Hajny, and J. Friml, “Auxin canalization and vascular tissue formation by TIR1/AFB-mediated auxin signaling in arabidopsis,” New Phytologist, vol. 226, no. 5. Wiley, pp. 1375–1383, 2020.
[Published Version]
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2020 | Published | Journal Article | IST-REx-ID: 8986 |

Y. Zhang, L. Rodriguez Solovey, L. Li, X. Zhang, and J. Friml, “Functional innovations of PIN auxin transporters mark crucial evolutionary transitions during rise of flowering plants,” Science Advances, vol. 6, no. 50. AAAS, 2020.
[Published Version]
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2019 | Published | Journal Article | IST-REx-ID: 5908 |

E. Lee et al., “Ionic stress enhances ER–PM connectivity via phosphoinositide-associated SYT1 contact site expansion in Arabidopsis,” Proceedings of the National Academy of Sciences of the United States of America, vol. 116, no. 4. National Academy of Sciences, pp. 1420–1429, 2019.
[Published Version]
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2019 | Published | Journal Article | IST-REx-ID: 6023 |

S. Yoshida et al., “A SOSEKI-based coordinate system interprets global polarity cues in arabidopsis,” Nature Plants, vol. 5, no. 2. Springer Nature, pp. 160–166, 2019.
[Submitted Version]
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2019 | Published | Journal Article | IST-REx-ID: 6104
M. Zwiewka et al., “Root adaptation to H2O2-induced oxidative stress by ARF-GEF BEN1- and cytoskeleton-mediated PIN2 trafficking,” Plant and Cell Physiology, vol. 60, no. 2. Oxford University Press, pp. 255–273, 2019.
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2019 | Published | Journal Article | IST-REx-ID: 6259 |

M. Cao et al., “TMK1-mediated auxin signalling regulates differential growth of the apical hook,” Nature, vol. 568. Springer Nature, pp. 240–243, 2019.
[Submitted Version]
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2019 | Published | Journal Article | IST-REx-ID: 6260 |

A. Oochi et al., “Pinstatic acid promotes auxin transport by inhibiting PIN internalization,” Plant Physiology, vol. 180, no. 2. ASPB, pp. 1152–1165, 2019.
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2019 | Published | Journal Article | IST-REx-ID: 6261 |

Y. Wang, Z. Gong, J. Friml, and J. Zhang, “Nitrate modulates the differentiation of root distal stem cells,” Plant Physiology, vol. 180, no. 1. ASPB, pp. 22–25, 2019.
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2019 | Published | Journal Article | IST-REx-ID: 6262 |

H. Rakusová, H. Han, P. Valošek, and J. Friml, “Genetic screen for factors mediating PIN polarization in gravistimulated Arabidopsis thaliana hypocotyls,” The Plant Journal, vol. 98, no. 6. Wiley, pp. 1048–1059, 2019.
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2019 | Published | Journal Article | IST-REx-ID: 6351 |

P. Marhavá, L. Hörmayer, S. Yoshida, P. Marhavý, E. Benková, and J. Friml, “Re-activation of stem cell pathways for pattern restoration in plant wound healing,” Cell, vol. 177, no. 4. Elsevier, p. 957–969.e13, 2019.
[Published Version]
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2019 | Published | Journal Article | IST-REx-ID: 6366 |

J. Bellstaedt et al., “A mobile auxin signal connects temperature sensing in cotyledons with growth responses in hypocotyls,” Plant Physiology, vol. 180, no. 2. ASPB, pp. 757–766, 2019.
[Published Version]
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2019 | Published | Journal Article | IST-REx-ID: 6377
Dejonghe W, Sharma I, Denoo B, De Munck S, Lu Q, Mishev K, Bulut H, Mylle E, De Rycke R, Vasileva MK, Savatin DV, Nerinckx W, Staes A, Drozdzecki A, Audenaert D, Yperman K, Madder A, Friml J, Van Damme D, Gevaert K, Haucke V, Savvides SN, Winne J, Russinova E. 2019. Disruption of endocytosis through chemical inhibition of clathrin heavy chain function. Nature Chemical Biology. 15(6), 641–649.
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2019 | Published | Journal Article | IST-REx-ID: 6504 |

Y. Zhang et al., “Auxin-mediated statolith production for root gravitropism,” New Phytologist, vol. 224, no. 2. Wiley, pp. 761–774, 2019.
[Submitted Version]
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2019 | Published | Journal Article | IST-REx-ID: 6611 |

M. Glanc, M. Fendrych, and J. Friml, “PIN2 polarity establishment in arabidopsis in the absence of an intact cytoskeleton,” Biomolecules, vol. 9, no. 6. MDPI, 2019.
[Published Version]
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2019 | Published | Journal Article | IST-REx-ID: 6778 |

Y. Zhang, G. Xiao, X. Wang, X. Zhang, and J. Friml, “Evolution of fast root gravitropism in seed plants,” Nature Communications, vol. 10. Springer Nature, 2019.
[Published Version]
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2019 | Published | Journal Article | IST-REx-ID: 6943 |

L. Hörmayer and J. Friml, “Targeted cell ablation-based insights into wound healing and restorative patterning,” Current Opinion in Plant Biology, vol. 52. Elsevier, pp. 124–130, 2019.
[Published Version]
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2019 | Published | Journal Article | IST-REx-ID: 6999 |

D. Huang et al., “Salicylic acid-mediated plasmodesmal closure via Remorin-dependent lipid organization,” Proceedings of the National Academy of Sciences of the United States of America, vol. 116, no. 42. Proceedings of the National Academy of Sciences, pp. 21274–21284, 2019.
[Published Version]
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2019 | Published | Journal Article | IST-REx-ID: 7106 |

R. Skokan et al., “PIN-driven auxin transport emerged early in streptophyte evolution,” Nature Plants, vol. 5, no. 11. Springer Nature, pp. 1114–1119, 2019.
[Submitted Version]
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2019 | Published | Journal Article | IST-REx-ID: 7143 |

S. A. Sinclair and J. Friml, “Defying gravity: a plant’s quest for moisture,” Cell Research, vol. 29. Springer Nature, pp. 965–966, 2019.
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2019 | Published | Journal Article | IST-REx-ID: 6627 |

M. Adamowski, L. Li, and J. Friml, “Reorientation of cortical microtubule arrays in the hypocotyl of arabidopsis thaliana is induced by the cell growth process and independent of auxin signaling,” International Journal of Molecular Sciences, vol. 20, no. 13. MDPI, 2019.
[Published Version]
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2018 | Published | Book Chapter | IST-REx-ID: 411
M. Karampelias, R. Tejos, J. Friml, and S. Vanneste, “Optimized whole mount in situ immunolocalization for Arabidopsis thaliana root meristems and lateral root primordia,” in Root Development. Methods and Protocols, vol. 1761, D. Ristova and E. Barbez, Eds. Springer, 2018, pp. 131–143.
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2018 | Published | Journal Article | IST-REx-ID: 412 |

M. Adamowski, M. Narasimhan, U. Kania, M. Glanc, G. De Jaeger, and J. Friml, “A functional study of AUXILIN LIKE1 and 2 two putative clathrin uncoating factors in Arabidopsis,” The Plant Cell, vol. 30, no. 3. American Society of Plant Biologists, pp. 700–716, 2018.
[Published Version]
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2018 | Published | Journal Article | IST-REx-ID: 428 |

Y. Salanenka et al., “Gibberellin DELLA signaling targets the retromer complex to redirect protein trafficking to the plasma membrane,” PNAS, vol. 115, no. 14. National Academy of Sciences, pp. 3716–3721, 2018.
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2018 | Published | Journal Article | IST-REx-ID: 449 |

T. Prat et al., “WRKY23 is a component of the transcriptional network mediating auxin feedback on PIN polarity,” PLoS Genetics, vol. 14, no. 1. Public Library of Science, 2018.
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2018 | Published | Journal Article | IST-REx-ID: 462 |

L. Fan et al., “NHX antiporters regulate the pH of endoplasmic reticulum and auxin-mediated development,” Plant, Cell and Environment, vol. 41. Wiley-Blackwell, pp. 850–864, 2018.
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2018 | Published | Journal Article | IST-REx-ID: 5673 |

M. Glanc, M. Fendrych, and J. Friml, “Mechanistic framework for cell-intrinsic re-establishment of PIN2 polarity after cell division,” Nature Plants, vol. 4, no. 12. Nature Research, pp. 1082–1088, 2018.
[Submitted Version]
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2018 | Published | Journal Article | IST-REx-ID: 913 |

R. Tejos, C. Rodríguez Furlán, M. Adamowski, M. Sauer, L. Norambuena, and J. Friml, “PATELLINS are regulators of auxin mediated PIN1 relocation and plant development in Arabidopsis thaliana,” Journal of Cell Science, vol. 131, no. 2. Company of Biologists, 2018.
[Published Version]
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2018 | Published | Journal Article | IST-REx-ID: 14 |

S. Hille, M. Akhmanova, M. Glanc, A. J. Johnson, and J. Friml, “Relative contribution of PIN-containing secretory vesicles and plasma membrane PINs to the directed auxin transport: Theoretical estimation,” International Journal of Molecular Sciences, vol. 19, no. 11. MDPI, 2018.
[Published Version]
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2018 | Published | Journal Article | IST-REx-ID: 146 |

C. L. Shi et al., “The dynamics of root cap sloughing in Arabidopsis is regulated by peptide signalling,” Nature Plants, vol. 4, no. 8. Nature Publishing Group, pp. 596–604, 2018.
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2018 | Published | Journal Article | IST-REx-ID: 147 |

U. Kania et al., “The inhibitor Endosidin 4 targets SEC7 domain-type ARF GTPase exchange factors and interferes with sub cellular trafficking in eukaryotes,” The Plant Cell, vol. 30, no. 10. Oxford University Press, pp. 2553–2572, 2018.
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2018 | Published | Journal Article | IST-REx-ID: 148 |

Nishiyama T, Sakayama H, De Vries J, Buschmann H, Saint Marcoux D, Ullrich K, Haas F, Vanderstraeten L, Becker D, Lang D, Vosolsobě S, Rombauts S, Wilhelmsson P, Janitza P, Kern R, Heyl A, Rümpler F, Calderón Villalobos L, Clay J, Skokan R, Toyoda A, Suzuki Y, Kagoshima H, Schijlen E, Tajeshwar N, Catarino B, Hetherington A, Saltykova A, Bonnot C, Breuninger H, Symeonidi A, Radhakrishnan G, Van Nieuwerburgh F, Deforce D, Chang C, Karol K, Hedrich R, Ulvskov P, Glöckner G, Delwiche C, Petrášek J, Van De Peer Y, Friml J, Beilby M, Dolan L, Kohara Y, Sugano S, Fujiyama A, Delaux PM, Quint M, Theissen G, Hagemann M, Harholt J, Dunand C, Zachgo S, Langdale J, Maumus F, Van Der Straeten D, Gould SB, Rensing S. 2018. The Chara genome: Secondary complexity and implications for plant terrestrialization. Cell. 174(2), 448–464.e24.
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2018 | Published | Journal Article | IST-REx-ID: 158 |

H. Robert et al., “Maternal auxin supply contributes to early embryo patterning in Arabidopsis,” Nature Plants, vol. 4, no. 8. Nature Publishing Group, pp. 548–553, 2018.
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2018 | Published | Journal Article | IST-REx-ID: 191 |

P. Grones et al., “PID/WAG-mediated phosphorylation of the Arabidopsis PIN3 auxin transporter mediates polarity switches during gravitropism,” Scientific Reports, vol. 8, no. 1. Springer, 2018.
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2018 | Published | Journal Article | IST-REx-ID: 192 |

M. Fendrych et al., “Rapid and reversible root growth inhibition by TIR1 auxin signalling,” Nature Plants, vol. 4, no. 7. Springer Nature, pp. 453–459, 2018.
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2018 | Published | Journal Article | IST-REx-ID: 203 |

M. Abbas et al., “Auxin methylation is required for differential growth in Arabidopsis,” PNAS, vol. 115, no. 26. National Academy of Sciences, pp. 6864–6869, 2018.
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2018 | Published | Journal Article | IST-REx-ID: 10881
T. R. Moturu et al., “Molecular evolution and diversification of the SMXL gene family,” Journal of Experimental Botany, vol. 69, no. 9. Oxford University Press, pp. 2367–2378, 2018.
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2018 | Published | Journal Article | IST-REx-ID: 442 |

L. Li, G. Krens, M. Fendrych, and J. Friml, “Real-time analysis of auxin response, cell wall pH and elongation in Arabidopsis thaliana Hypocotyls,” Bio-protocol, vol. 8, no. 1. Bio-protocol, 2018.
[Published Version]
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2017 | Published | Book Chapter | IST-REx-ID: 545 |

E. Mazur and J. Friml, “Vascular tissue development and regeneration in the model plant arabidopsis,” in Plant Engineering, S. Jurić, Ed. InTech, 2017, pp. 113–140.
[Published Version]
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2017 | Research Data | IST-REx-ID: 5565 |

D. von Wangenheim, R. Hauschild, and J. Friml, “Light Sheet Fluorescence microscopy of plant roots growing on the surface of a gel.” Institute of Science and Technology Austria, 2017.
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2017 | Published | Journal Article | IST-REx-ID: 799 |

S. Kitakura et al., “BEN3/BIG2 ARF GEF is involved in brefeldin a-sensitive trafficking at the trans-Golgi network/early endosome in Arabidopsis thaliana,” Plant and Cell Physiology, vol. 58, no. 10. Oxford University Press, 2017.
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2017 | Published | Journal Article | IST-REx-ID: 1110 |

B. Kuhn et al., “Flavonol-induced changes in PIN2 polarity and auxin transport in the Arabidopsis thaliana rol1-2 mutant require phosphatase activity,” Scientific Reports, vol. 7. Nature Publishing Group, 2017.
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2017 | Published | Journal Article | IST-REx-ID: 1159 |

W. Steenackers et al., “Cis-cinnamic acid is a novel natural auxin efflux inhibitor that promotes lateral root formation,” Plant Physiology, vol. 173, no. 1. American Society of Plant Biologists, pp. 552–565, 2017.
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| PubMed | Europe PMC
2017 | Published | Journal Article | IST-REx-ID: 946 |

D. von Wangenheim, R. Hauschild, M. Fendrych, V. Barone, E. Benková, and J. Friml, “Live tracking of moving samples in confocal microscopy for vertically grown roots,” eLife, vol. 6. eLife Sciences Publications, 2017.
[Published Version]
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2017 | Published | Journal Article | IST-REx-ID: 1078 |

D. von Wangenheim, R. Hauschild, and J. Friml, “Light sheet fluorescence microscopy of plant roots growing on the surface of a gel,” Journal of visualized experiments JoVE, vol. 2017, no. 119. Journal of Visualized Experiments, 2017.
[Published Version]
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| WoS
2016 | Published | Journal Article | IST-REx-ID: 1247 |

M. Karampelias et al., “ROTUNDA3 function in plant development by phosphatase 2A-mediated regulation of auxin transporter recycling,” PNAS, vol. 113, no. 10. National Academy of Sciences, pp. 2768–2773, 2016.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1251 |

Zhu J, Bailly A, Zwiewka M, Sovero V, Di Donato M, Ge P, Oehri J, Aryal B, Hao P, Linnert M, Burgardt N, Lücke C, Weiwad M, Michel M, Weiergräber O, Pollmann S, Azzarello E, Mancuso S, Ferro N, Fukao Y, Hoffmann C, Wedlich Söldner R, Friml J, Thomas C, Geisler M. 2016. TWISTED DWARF1 mediates the action of auxin transport inhibitors on actin cytoskeleton dynamics. Plant Cell. 28(4), 930–948.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1264 |

G. Sancho Andrés et al., “Sorting motifs involved in the trafficking and localization of the PIN1 auxin efflux carrier,” Plant Physiology, vol. 171, no. 3. American Society of Plant Biologists, pp. 1965–1982, 2016.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1274 |

E. Mazur, E. Benková, and J. Friml, “Vascular cambium regeneration and vessel formation in wounded inflorescence stems of Arabidopsis,” Scientific Reports, vol. 6. Nature Publishing Group, 2016.
[Published Version]
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2016 | Published | Journal Article | IST-REx-ID: 1277 |

F. Ortiz Morea et al., “Danger-associated peptide signaling in Arabidopsis requires clathrin,” PNAS, vol. 113, no. 39. National Academy of Sciences, pp. 11028–11033, 2016.
[Preprint]
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2016 | Published | Journal Article | IST-REx-ID: 1344 |

M. Fendrych, J. Leung, and J. Friml, “TIR1 AFB Aux IAA auxin perception mediates rapid cell wall acidification and growth of Arabidopsis hypocotyls,” eLife, vol. 5. eLife Sciences Publications, 2016.
[Published Version]
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2016 | Published | Journal Article | IST-REx-ID: 1345 |

G. Molnar, M. Fendrych, and J. Friml, “Plasma membrane: Negative attraction,” Nature Plants, vol. 2. Nature Publishing Group, 2016.
[Published Version]
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2016 | Published | Journal Article | IST-REx-ID: 1346 |

Dejonghe W, Kuenen S, Mylle E, Vasileva MK, Keech O, Viotti C, Swerts J, Fendrych M, Ortiz Morea F, Mishev K, Delang S, Scholl S, Zarza X, Heilmann M, Kourelis J, Kasprowicz J, Nguyen L, Drozdzecki A, Van Houtte I, Szatmári A, Majda M, Baisa G, Bednarek S, Robert S, Audenaert D, Testerink C, Munnik T, Van Damme D, Heilmann I, Schumacher K, Winne J, Friml J, Verstreken P, Russinova E. 2016. Mitochondrial uncouplers inhibit clathrin-mediated endocytosis largely through cytoplasmic acidification. Nature Communications. 7, 11710.
[Published Version]
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2016 | Published | Journal Article | IST-REx-ID: 1372 |

M. Pernisová et al., “Cytokinins influence root gravitropism via differential regulation of auxin transporter expression and localization in Arabidopsis,” New Phytologist, vol. 212, no. 2. Wiley-Blackwell, pp. 497–509, 2016.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1145 |

T. Nodzyński, S. Vanneste, M. Zwiewka, M. Pernisová, J. Hejátko, and J. Friml, “Enquiry into the topology of plasma membrane localized PIN auxin transport components,” Molecular Plant, vol. 9, no. 11. Cell Press, pp. 1504–1519, 2016.
[Published Version]
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2016 | Published | Journal Article | IST-REx-ID: 1147 |

J. Balla et al., “Auxin flow mediated competition between axillary buds to restore apical dominance,” Scientific Reports, vol. 6. Nature Publishing Group, 2016.
[Published Version]
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2016 | Published | Journal Article | IST-REx-ID: 1151 |

S. Simonini et al., “A noncanonical auxin sensing mechanism is required for organ morphogenesis in arabidopsis,” Genes and Development, vol. 30, no. 20. Cold Spring Harbor Laboratory Press, pp. 2286–2296, 2016.
[Published Version]
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2016 | Published | Journal Article | IST-REx-ID: 1153 |

P. Žádníková et al., “A model of differential growth guided apical hook formation in plants,” Plant Cell, vol. 28, no. 10. American Society of Plant Biologists, pp. 2464–2477, 2016.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1212 |

H. Rakusová, M. Abbas, H. Han, S. Song, H. Robert, and J. Friml, “Termination of shoot gravitropic responses by auxin feedback on PIN3 polarity,” Current Biology, vol. 26, no. 22. Cell Press, pp. 3026–3032, 2016.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1221 |

J. Michalko, M. Glanc, C. Perrot Rechenmann, and J. Friml, “Strong morphological defects in conditional Arabidopsis abp1 knock-down mutants generated in absence of functional ABP1 protein,” F1000 Research , vol. 5. F1000 Research, 2016.
[Published Version]
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2016 | Published | Journal Article | IST-REx-ID: 1410 |

J. Ugalde et al., “Phosphatidylinositol 4-phosphate 5-kinases 1 and 2 are involved in the regulation of vacuole morphology during Arabidopsis thaliana pollen development,” Plant Science, vol. 250. Elsevier, pp. 10–19, 2016.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1417 |

S. Simon et al., “PIN6 auxin transporter at endoplasmic reticulum and plasma membrane mediates auxin homeostasis and organogenesis in Arabidopsis,” New Phytologist, vol. 211, no. 1. Wiley-Blackwell, pp. 65–74, 2016.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1484 |

X. Chen, S. Wu, Z. Liu, and J. Friml, “Environmental and endogenous control of cortical microtubule orientation,” Trends in Cell Biology, vol. 26, no. 6. Cell Press, pp. 409–419, 2016.
[Submitted Version]
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2016 | Published | Journal Article | IST-REx-ID: 1492 |

P. Marhavý et al., “Targeted cell elimination reveals an auxin-guided biphasic mode of lateral root initiation,” Genes and Development, vol. 30, no. 4. Cold Spring Harbor Laboratory Press, pp. 471–483, 2016.
[Published Version]
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2016 | Published | Journal Article | IST-REx-ID: 1641 |

R. Zemová, M. Zwiewka, A. Bielach, H. Robert, and J. Friml, “A forward genetic screen for new regulators of auxin mediated degradation of auxin transport proteins in Arabidopsis thaliana,” Journal of Plant Growth Regulation, vol. 35, no. 2. Springer, pp. 465–476, 2016.
[Preprint]
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2016 | Published | Journal Article | IST-REx-ID: 1081 |

Ł. Łangowski et al., “Cellular mechanisms for cargo delivery and polarity maintenance at different polar domains in plant cells,” Cell Discovery, vol. 2. Nature Publishing Group, 2016.
[Published Version]
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2015 | Published | Journal Article | IST-REx-ID: 1383 |

L. Yu et al., “V-ATPase activity in the TGN/EE is required for exocytosis and recycling in Arabidopsis,” Nature Plants, vol. 1, no. 7. Nature Publishing Group, 2015.
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2015 | Published | Journal Article | IST-REx-ID: 1509 |

J. Michalko, M. Lukacisinova, M. T. Bollenbach, and J. Friml, “Embryo-lethal phenotypes in early abp1 mutants are due to disruption of the neighboring BSM gene,” F1000 Research , vol. 4. F1000 Research, 2015.
[Published Version]
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2015 | Published | Journal Article | IST-REx-ID: 1532
H. Yang, J. Von Der Fecht Bartenbach, J. Friml, J. Lohmann, B. Neuhäuser, and U. Ludewig, “Auxin-modulated root growth inhibition in Arabidopsis thaliana seedlings with ammonium as the sole nitrogen source,” Functional Plant Biology, vol. 42, no. 3. CSIRO, pp. 239–251, 2015.
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2015 | Published | Journal Article | IST-REx-ID: 1534 |

H. Wang et al., “Transcriptional regulation of PIN genes by FOUR LIPS and MYB88 during Arabidopsis root gravitropism,” Nature Communications, vol. 6. Nature Publishing Group, 2015.
[Published Version]
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2015 | Published | Journal Article | IST-REx-ID: 1556 |

Y. Jia et al., “The Arabidopsis thaliana elongator complex subunit 2 epigenetically affects root development,” Journal of Experimental Botany, vol. 66, no. 15. Oxford University Press, pp. 4631–4642, 2015.
[Published Version]
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2015 | Published | Journal Article | IST-REx-ID: 1569 |

S. Doyle et al., “An early secretory pathway mediated by gnom-like 1 and gnom is essential for basal polarity establishment in Arabidopsis thaliana,” PNAS, vol. 112, no. 7. National Academy of Sciences, pp. E806–E815, 2015.
[Published Version]
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2015 | Published | Journal Article | IST-REx-ID: 1574 |

Chen Q, Liu Y, Maere S, Lee E, Van Isterdael G, Xie Z, Xuan W, Lucas J, Vassileva V, Kitakura S, Marhavý P, Wabnik KT, Geldner N, Benková E, Le J, Fukaki H, Grotewold E, Li C, Friml J, Sack F, Beeckman T, Vanneste S. 2015. A coherent transcriptional feed-forward motif model for mediating auxin-sensitive PIN3 expression during lateral root development. Nature Communications. 6, 8821.
[Published Version]
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2015 | Published | Journal Article | IST-REx-ID: 1591 |

M. Adamowski and J. Friml, “PIN-dependent auxin transport: Action, regulation, and evolution,” Plant Cell, vol. 27, no. 1. American Society of Plant Biologists, pp. 20–32, 2015.
[Submitted Version]
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2015 | Published | Journal Article | IST-REx-ID: 1640 |

M. Šimášková et al., “Cytokinin response factors regulate PIN-FORMED auxin transporters,” Nature Communications, vol. 6. Nature Publishing Group, 2015.
[Submitted Version]
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2015 | Published | Journal Article | IST-REx-ID: 1819
M. Zwiewka, T. Nodzyński, S. Robert, S. Vanneste, and J. Friml, “Osmotic stress modulates the balance between exocytosis and clathrin mediated endocytosis in Arabidopsis thaliana,” Molecular Plant, vol. 8, no. 8. Elsevier, pp. 1175–1187, 2015.
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2015 | Published | Journal Article | IST-REx-ID: 1871 |

P. Grones and J. Friml, “Auxin transporters and binding proteins at a glance,” Journal of Cell Science, vol. 128, no. 1. Company of Biologists, pp. 1–7, 2015.
[Submitted Version]
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2014 | Published | Journal Article | IST-REx-ID: 1852 |

M. Sassi et al., “An auxin-mediated shift toward growth isotropy promotes organ formation at the shoot meristem in Arabidopsis,” Current Biology, vol. 24, no. 19. Cell Press, pp. 2335–2342, 2014.
[Submitted Version]
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2014 | Published | Journal Article | IST-REx-ID: 1862 |

X. Chen et al., “Inhibition of cell expansion by rapid ABP1-mediated auxin effect on microtubules,” Nature, vol. 516, no. 729. Nature Publishing Group, pp. 90–93, 2014.
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2014 | Published | Journal Article | IST-REx-ID: 1893 |

P. Marhavá et al., “SAC phosphoinositide phosphatases at the tonoplast mediate vacuolar function in Arabidopsis,” PNAS, vol. 111, no. 7. National Academy of Sciences, pp. 2818–2823, 2014.
[Submitted Version]
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2014 | Published | Journal Article | IST-REx-ID: 1897 |

S. Naramoto et al., “Insights into the localization and function of the membrane trafficking regulator GNOM ARF-GEF at the Golgi apparatus in Arabidopsis,” Plant Cell, vol. 26, no. 7. American Society of Plant Biologists, pp. 3062–3076, 2014.
[Submitted Version]
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2014 | Published | Journal Article | IST-REx-ID: 1915
X. Chen and J. Friml, “Rho-GTPase-regulated vesicle trafficking in plant cell polarity,” Biochemical Society Transactions, vol. 42, no. 1. Portland Press, pp. 212–218, 2014.
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| PubMed | Europe PMC
2014 | Published | Journal Article | IST-REx-ID: 1917 |

T. Xu et al., “Cell surface ABP1-TMK auxin sensing complex activates ROP GTPase signaling,” Science, vol. 343, no. 6174. American Association for the Advancement of Science, pp. 1025–1028, 2014.
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2014 | Published | Journal Article | IST-REx-ID: 1921 |

R. Tejos et al., “Bipolar plasma membrane distribution of phosphoinositides and their requirement for auxin-mediated cell polarity and patterning in Arabidopsis,” Plant Cell, vol. 26, no. 5. American Society of Plant Biologists, pp. 2114–2128, 2014.
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2014 | Published | Journal Article | IST-REx-ID: 1996 |

O. Hazak, U. Obolski, T. Prat, J. Friml, L. Hadany, and S. Yalovsky, “Bimodal regulation of ICR1 levels generates self-organizing auxin distribution,” PNAS, vol. 111, no. 50. National Academy of Sciences, pp. E5471–E5479, 2014.
[Submitted Version]
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2014 | Published | Journal Article | IST-REx-ID: 2188 |

U. Kania, M. Fendrych, and J. Friml, “Polar delivery in plants; commonalities and differences to animal epithelial cells,” Open Biology, vol. 4, no. APRIL. Royal Society, 2014.
[Published Version]
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2014 | Published | Journal Article | IST-REx-ID: 2223 |

H. Tanaka et al., “BEX1/ARF1A1C is required for BFA-sensitive recycling of PIN auxin transporters and auxin-mediated development in arabidopsis,” Plant and Cell Physiology, vol. 55, no. 4. Oxford University Press, pp. 737–749, 2014.
[Published Version]
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2014 | Published | Journal Article | IST-REx-ID: 2240
Gadeyne A, Sánchez Rodríguez C, Vanneste S, Di Rubbo S, Zauber H, Vanneste K, Van Leene J, De Winne N, Eeckhout D, Persiau G, Van De Slijke E, Cannoot B, Vercruysse L, Mayers J, Adamowski M, Kania U, Ehrlich M, Schweighofer A, Ketelaar T, Maere S, Bednarek S, Friml J, Gevaert K, Witters E, Russinova E, Persson S, De Jaeger G, Van Damme D. 2014. The TPLATE adaptor complex drives clathrin-mediated endocytosis in plants. Cell. 156(4), 691–704.
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2014 | Published | Book Chapter | IST-REx-ID: 2245
S. Simon, P. Skůpa, P. Dobrev, J. Petrášek, E. Zažímalová, and J. Friml, “Analyzing the in vivo status of exogenously applied auxins: A HPLC-based method to characterize the intracellularly localized auxin transporters,” in Plant Chemical Genomics, vol. 1056, G. Hicks and S. Robert, Eds. Springer, 2014, pp. 255–264.
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2014 | Published | Journal Article | IST-REx-ID: 2249 |

Y. Chen, K. Aung, J. Rolčík, K. Walicki, J. Friml, and F. Brandizzí, “Inter-regulation of the unfolded protein response and auxin signaling,” Plant Journal, vol. 77, no. 1. Wiley-Blackwell, pp. 97–107, 2014.
[Submitted Version]
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2014 | Published | Journal Article | IST-REx-ID: 2253 |

A. Bailly et al., “Expression of TWISTED DWARF1 lacking its in-plane membrane anchor leads to increased cell elongation and hypermorphic growth,” Plant Journal, vol. 77, no. 1. Wiley-Blackwell, pp. 108–118, 2014.
[Published Version]
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2013 | Published | Journal Article | IST-REx-ID: 2470 |

M. Čovanová, M. Sauer, J. Rychtář, J. Friml, J. Petrášek, and E. Zažímalová, “Overexpression of the auxin binding PROTEIN1 modulates PIN-dependent auxin transport in tobacco cells,” PLoS One, vol. 8, no. 7. Public Library of Science, 2013.
[Published Version]
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2013 | Published | Journal Article | IST-REx-ID: 2472 |

C. Cazzonelli et al., “Role of the Arabidopsis PIN6 auxin transporter in auxin homeostasis and auxin-mediated development,” PLoS One, vol. 8, no. 7. Public Library of Science, 2013.
[Published Version]
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2013 | Published | Journal Article | IST-REx-ID: 2808 |

K. Landberg et al., “The moss physcomitrella patens reproductive organ development is highly organized, affected by the two SHI/STY genes and by the level of active auxin in the SHI/STY expression domain,” Plant Physiology, vol. 162, no. 3. American Society of Plant Biologists, pp. 1406–1419, 2013.
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2013 | Published | Journal Article | IST-REx-ID: 2821 |

E. Remy et al., “A major facilitator superfamily transporter plays a dual role in polar auxin transport and drought stress tolerance in Arabidopsis,” Plant Cell, vol. 25, no. 3. American Society of Plant Biologists, pp. 901–926, 2013.
[Submitted Version]
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2013 | Published | Journal Article | IST-REx-ID: 2827 |

Y. Du et al., “Salicylic acid interferes with clathrin-mediated endocytic protein trafficking,” PNAS, vol. 110, no. 19. National Academy of Sciences, pp. 7946–7951, 2013.
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2013 | Published | Journal Article | IST-REx-ID: 2832 |

H. Tanaka et al., “Cell polarity and patterning by PIN trafficking through early endosomal compartments in arabidopsis thaliana,” PLoS Genetics, vol. 9, no. 5. Public Library of Science, 2013.
[Published Version]
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2013 | Published | Journal Article | IST-REx-ID: 2835 |

H. Yu et al., “Root ultraviolet b-sensitive1/weak auxin response3 is essential for polar auxin transport in arabidopsis,” Plant Physiology, vol. 162, no. 2. American Society of Plant Biologists, pp. 965–976, 2013.
[Submitted Version]
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2013 | Published | Journal Article | IST-REx-ID: 2881 |

H. Li et al., “Cytokinin signaling regulates pavement cell morphogenesis in Arabidopsis,” Cell Research, vol. 23, no. 2. Nature Publishing Group, pp. 290–299, 2013.
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2013 | Published | Journal Article | IST-REx-ID: 2882 |

C. Löfke, M. Zwiewka, I. Heilmann, M. Van Montagu, T. Teichmann, and J. Friml, “Asymmetric gibberellin signaling regulates vacuolar trafficking of PIN auxin transporters during root gravitropism,” PNAS, vol. 110, no. 9. National Academy of Sciences, pp. 3627–3632, 2013.
[Submitted Version]
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2013 | Published | Journal Article | IST-REx-ID: 2883 |

B. Wang et al., “Arabidopsis TWISTED DWARF1 functionally interacts with auxin exporter ABCB1 on the root plasma membrane,” Plant Cell, vol. 25, no. 1. American Society of Plant Biologists, pp. 202–214, 2013.
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2013 | Published | Journal Article | IST-REx-ID: 2919 |

P. Baster et al., “SCF^TIR1 AFB-auxin signalling regulates PIN vacuolar trafficking and auxin fluxes during root gravitropism,” EMBO Journal, vol. 32, no. 2. Wiley-Blackwell, pp. 260–274, 2013.
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2013 | Published | Journal Article | IST-REx-ID: 507 |

S. Kim et al., “Adaptor protein complex 2-mediated endocytosis is crucial for male reproductive organ development in arabidopsis,” Plant Cell, vol. 25, no. 8. American Society of Plant Biologists, pp. 2970–2985, 2013.
[Submitted Version]
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2013 | Published | Journal Article | IST-REx-ID: 509 |

S. Di Rubbo et al., “The clathrin adaptor complex AP-2 mediates endocytosis of brassinosteroid INSENSITIVE1 in arabidopsis,” Plant Cell, vol. 25, no. 8. American Society of Plant Biologists, pp. 2986–2997, 2013.
[Submitted Version]
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2013 | Published | Journal Article | IST-REx-ID: 516 |

B. Bargmann et al., “A map of cell type‐specific auxin responses,” Molecular Systems Biology, vol. 9, no. 1. Nature Publishing Group, 2013.
[Published Version]
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2013 | Published | Journal Article | IST-REx-ID: 831
Péret B, Middleton A, French A, Larrieu A, Bishopp A, Njo M, Wells D, Porco S, Mellor N, Band L, Casimiro I, Kleine Vehn J, Vanneste S, Sairanen I, Mallet R, Sandberg G, Ljung K, Beeckman T, Benková E, Friml J, Kramer E, King J, De Smet I, Pridmore T, Owen M, Bennett M. 2013. Sequential induction of auxin efflux and influx carriers regulates lateral root emergence. Molecular Systems Biology. 9.
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2013 | Published | Journal Article | IST-REx-ID: 2290 |

Y. Boutté et al., “ECHIDNA mediated post Golgi trafficking of auxin carriers for differential cell elongation,” PNAS, vol. 110, no. 40. National Academy of Sciences, pp. 16259–16264, 2013.
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2013 | Published | Journal Article | IST-REx-ID: 2443 |

S. Simon et al., “Defining the selectivity of processes along the auxin response chain: A study using auxin analogues,” New Phytologist, vol. 200, no. 4. Wiley, pp. 1034–1048, 2013.
[Published Version]
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2013 | Published | Journal Article | IST-REx-ID: 2448 |

E. Remy, P. Baster, J. Friml, and P. Duque, “ZIFL1.1 transporter modulates polar auxin transport by stabilizing membrane abundance of multiple PINs in Arabidopsis root tip,” Plant Signaling & Behavior, vol. 8, no. 10. Taylor & Francis, 2013.
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2013 | Published | Journal Article | IST-REx-ID: 10895 |

S. Vanneste and J. Friml, “Calcium: The missing link in auxin action,” Plants, vol. 2, no. 4. MDPI, pp. 650–675, 2013.
[Published Version]
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2012 | Published | Journal Article | IST-REx-ID: 2459 |

M. Zwiewka and J. Friml, “Fluorescence imaging-based forward genetic screens to identify trafficking regulators in plants,” Frontiers in Plant Science, vol. 3, no. May. Frontiers Research Foundation, 2012.
[Published Version]
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2012 | Published | Journal Article | IST-REx-ID: 3104
W. Grunewald et al., “Transcription factor WRKY23 assists auxin distribution patterns during Arabidopsis root development through local control on flavonol biosynthesis,” PNAS, vol. 109, no. 5. National Academy of Sciences, pp. 1554–1559, 2012.
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2012 | Published | Journal Article | IST-REx-ID: 3105
Whitford R, Fernandez A, Tejos R, Pérez A, Kleine Vehn J, Vanneste S, Drozdzecki A, Leitner J, Abas L, Aerts M, Hoogewijs K, Baster P, De Groodt R, Lin Y, Storme V, Van De Peer Y, Beeckman T, Madder A, Devreese B, Luschnig C, Friml J, Hilson P. 2012. GOLVEN secretory peptides regulate auxin carrier turnover during plant gravitropic responses. Developmental Cell. 22(3), 678–685.
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2012 | Published | Journal Article | IST-REx-ID: 3114
Ding Z, Wang B, Moreno I, Dupláková N, Simon S, Carraro N, Reemmer J, Pěnčík A, Chen X, Tejos R, Skůpa P, Pollmann S, Mravec J, Petrášek J, Zažímalová E, Honys D, Rolčík J, Murphy A, Orellana A, Geisler M, Friml J. 2012. ER-localized auxin transporter PIN8 regulates auxin homeostasis and male gametophyte development in Arabidopsis. Nature Communications. 3(AN 941).
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2011 | Published | Journal Article | IST-REx-ID: 3091 |

M. Sauer and J. Friml, “Fleeting hormone cues get stabilized for plant organogenesis,” Molecular Systems Biology, vol. 7. Nature Publishing Group, 2011.
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2011 | Published | Journal Article | IST-REx-ID: 3092 |

K. T. Wabnik, W. Govaerts, J. Friml, and J. Kleine Vehn, “Feedback models for polarized auxin transport: An emerging trend,” Molecular BioSystems, vol. 7, no. 8. Royal Society of Chemistry, pp. 2352–2359, 2011.
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2011 | Published | Journal Article | IST-REx-ID: 3100 |

S. Vanneste et al., “Developmental regulation of CYCA2s contributes to tissue-specific proliferation in Arabidopsis ,” EMBO Journal, vol. 30, no. 16. Wiley-Blackwell, pp. 3430–3441, 2011.
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2011 | Published | Journal Article | IST-REx-ID: 3101 |

M. Zwiewka et al., “The AP 3 adaptor complex is required for vacuolar function in Arabidopsis,” Cell Research, vol. 21, no. 12. Nature Publishing Group, pp. 1711–1722, 2011.
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2011 | Published | Journal Article | IST-REx-ID: 3102
B. Berckmans et al., “Auxin Dependent cell cycle reactivation through transcriptional regulation of arabidopsis E2Fa by lateral organ boundary proteins,” Plant Cell, vol. 23, no. 10. American Society of Plant Biologists, pp. 3671–3683, 2011.
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2011 | Published | Journal Article | IST-REx-ID: 2454 |

H. Li et al., “Phosphorylation switch modulates the interdigitated pattern of PIN1 localization and cell expansion in Arabidopsis leaf epidermis,” Cell Research, vol. 21, no. 6. Nature Publishing Group, pp. 970–978, 2011.
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2010 | Published | Journal Article | IST-REx-ID: 3070
T. Nawy, M. Bayer, J. Mravec, J. Friml, K. Birnbaum, and W. Lukowitz, “The GATA factor HANABA TARANU is required to position the proembryo boundary in the early Arabidopsis embryo,” Developmental Cell, vol. 19, no. 1. Cell Press, pp. 103–113, 2010.
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2010 | Published | Journal Article | IST-REx-ID: 3072 |

W. Grunewald and J. Friml, “The march of the PINs: Developmental plasticity by dynamic polar targeting in plant cells,” EMBO Journal, vol. 29, no. 16. Wiley-Blackwell, pp. 2700–2714, 2010.
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2010 | Published | Journal Article | IST-REx-ID: 3073
P. Dhonukshe et al., “Plasma membrane-bound AGC3 kinases phosphorylate PIN auxin carriers at TPRXS(N/S) motifs to direct apical PIN recycling,” Development, vol. 137, no. 19. Company of Biologists, pp. 3245–3255, 2010.
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2010 | Published | Journal Article | IST-REx-ID: 3077 |

J. Friml and A. Jones, “Endoplasmic reticulum: The rising compartment in auxin biology,” Plant Physiology, vol. 154, no. 2. American Society of Plant Biologists, pp. 458–462, 2010.
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2010 | Published | Journal Article | IST-REx-ID: 3080
J. Kleine Vehn, Z. Ding, A. Jones, M. Tasaka, M. Morita, and J. Friml, “Gravity induced PIN transcytosis for polarization of auxin fluxes in gravity sensing root cells,” PNAS, vol. 107, no. 51. National Academy of Sciences, pp. 22344–22349, 2010.
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2010 | Published | Journal Article | IST-REx-ID: 2442 |

T. Beeckman and J. Friml, “Nitrate Contra Auxin: Nutrient Sensing by roots,” Developmental Cell, vol. 18, no. 6. Cell Press, pp. 877–878, 2010.
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2009 | Published | Journal Article | IST-REx-ID: 3051 |

D. Weijers and J. Friml, “SnapShot: Auxin signaling and transport,” Cell, vol. 136, no. 6. Cell Press, pp. 1172–1172, 2009.
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2009 | Published | Journal Article | IST-REx-ID: 3052 |

S. Vanneste and J. Friml, “Auxin: A trigger for change in plant development,” Cell, vol. 136, no. 6. Cell Press, pp. 1005–1016, 2009.
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2009 | Published | Journal Article | IST-REx-ID: 3054
H. Robert and J. Friml, “Auxin and other signals on the move in plants,” Nature Chemical Biology, vol. 5, no. 5. Nature Publishing Group, pp. 325–332, 2009.
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2009 | Published | Journal Article | IST-REx-ID: 3057 |

J. Petrášek and J. Friml, “Auxin transport routes in plant development,” Development, vol. 136, no. 16. Company of Biologists, pp. 2675–2688, 2009.
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2009 | Published | Journal Article | IST-REx-ID: 3059
J. Kleine Vehn et al., “PIN auxin efflux carrier polarity is regulated by PINOID kinase mediated recruitment into GNOM independent trafficking in arabidopsis,” Plant Cell, vol. 21, no. 12. American Society of Plant Biologists, pp. 3839–3849, 2009.
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2009 | Published | Journal Article | IST-REx-ID: 3061 |

P. Křeček et al., “The PIN-FORMED (PIN) protein family of auxin transporters,” Genome Biology, vol. 10, no. 12. BioMed Central, 2009.
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2008 | Published | Journal Article | IST-REx-ID: 3037 |

E. Feraru and J. Friml, “PIN polar targeting,” Plant Physiology, vol. 147, no. 4. American Society of Plant Biologists, pp. 1553–1559, 2008.
[Published Version]
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2008 | Published | Journal Article | IST-REx-ID: 3038
Swarup K, Benková E, Swarup R, Casimiro I, Péret B, Yang Y, Parry G, Nielsen E, De Smet I, Vanneste S, Levesque M, Carrier D, James N, Calvo V, Ljung K, Kramer E, Roberts R, Graham N, Marillonnet S, Patel K, Jones J, Taylor C, Schachtman D, May S, Sandberg G, Benfey P, Friml J, Kerr I, Beeckman T, Laplaze L, Bennett M. 2008. The auxin influx carrier LAX3 promotes lateral root emergence. Nature Cell Biology. 10(8), 946–954.
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2008 | Published | Journal Article | IST-REx-ID: 3040
J. Kleine Vehn, Ł. Łangowski, J. Wiśniewska, P. Dhonukshe, P. Brewer, and J. Friml, “Cellular and molecular requirements for polar PIN targeting and transcytosis in plants,” Molecular Plant, vol. 1, no. 6. Oxford University Press, pp. 1056–1066, 2008.
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2008 | Published | Journal Article | IST-REx-ID: 3041
D. Santelia et al., “Flavonoids redirect PIN mediated polar auxin fluxes during root gravitropic responses,” Journal of Biological Chemistry, vol. 283, no. 45. American Society for Biochemistry and Molecular Biology, pp. 31218–31226, 2008.
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2008 | Published | Journal Article | IST-REx-ID: 3043
J. Kleine Vehn and J. Friml, “Polar targeting and endocytic recycling in auxin-dependent plant development,” Annual Review of Cell and Developmental Biology, vol. 24. Annual Reviews, pp. 447–473, 2008.
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2007 | Published | Journal Article | IST-REx-ID: 3023
P. Dhonukshe, J. Šamaj, F. Baluška, and J. Friml, “A unifying new model of cytokinesis for the dividing plant and animal cells,” Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology, vol. 29, no. 4. Wiley-Blackwell, pp. 371–381, 2007.
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2007 | Published | Journal Article | IST-REx-ID: 3024
A. Vieten, M. Sauer, P. Brewer, and J. Friml, “Molecular and cellular aspects of auxin-transport-mediated development,” Trends in Plant Science, vol. 12, no. 4. Cell Press, pp. 160–168, 2007.
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2007 | Published | Journal Article | IST-REx-ID: 2451
J. Friml, “Auxin - Universal development signal in plant life,” Živa, vol. 1. CSAV, 2007.
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2006 | Published | Journal Article | IST-REx-ID: 3009 |

T. Paciorek and J. Friml, “Auxin signaling,” Journal of Cell Science, vol. 119, no. 7. Company of Biologists, pp. 1199–1202, 2006.
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2006 | Published | Journal Article | IST-REx-ID: 3012
Petrášek J, Mravec J, Bouchard R, Blakeslee J, Abas MF, Seifertová D, Wiśniewska J, Tadele Z, Kubeš M, Čovanová M, Dhonukshe P, Skůpa P, Benková E, Perry L, Křeček P, Lee O, Fink G, Geisler M, Murphy A, Luschnig C, Zažímalová E, Friml J. 2006. PIN proteins perform a rate-limiting function in cellular auxin efflux. Science. 312(5775), 914–918.
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2006 | Published | Journal Article | IST-REx-ID: 3016
M. Sauer et al., “Canalization of auxin flow by Aux/IAA-ARF-dependent feedback regulation of PIN polarity,” Genes and Development, vol. 20, no. 20. Cold Spring Harbor Laboratory Press, pp. 2902–2911, 2006.
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2006 | Published | Journal Article | IST-REx-ID: 3018
J. Kleine Vehn, P. Dhonukshe, R. Swarup, M. Bennett, and J. Friml, “Subcellular trafficking of the Arabidopsis auxin influx carrier AUX1 uses a novel pathway distinct from PIN1,” Plant Cell, vol. 18, no. 11. American Society of Plant Biologists, pp. 3171–3181, 2006.
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2006 | Published | Journal Article | IST-REx-ID: 3020
J. Hejátko, I. Blilou, P. Brewer, J. Friml, B. Scheres, and E. Benková, “In situ hybridization technique for mRNA detection in whole mount Arabidopsis samples,” Nature Protocols, vol. 1, no. 4. Nature Publishing Group, pp. 1939–1946, 2006.
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2005 | Published | Book Chapter | IST-REx-ID: 2464
J. Friml and J. Wiśniewska, “Auxin as an intercellular signal,” in Intercellular Communication in Plants, vol. 16, A. Fleming, Ed. Wiley-Blackwell, 2005.
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2005 | Published | Journal Article | IST-REx-ID: 3004
D. Weijers et al., “Maintenance of embryonic auxin distribution for apical basal patterning by PIN FORMED dependent auxin transport in Arabidopsis,” Plant Cell, vol. 17, no. 9. American Society of Plant Biologists, pp. 2517–2526, 2005.
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2004 | Published | Journal Article | IST-REx-ID: 2998
M. Duroux, A. Houben, K. Růžička, J. Friml, and K. Grasser, “The chromatin remodelling complex FACT associates with actively transcribed regions of the Arabidopsis genome,” Plant Journal, vol. 40, no. 5. Wiley-Blackwell, pp. 660–671, 2004.
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2003 | Published | Journal Article | IST-REx-ID: 2992
V. Willemsen, J. Friml, M. Grebe, A. Van Den Toorn, K. Palme, and B. Scheres, “Cell polarity and PIN protein positioning in Arabidopsis require STEROL METHYLTRANSFERASE1 function,” Plant Cell, vol. 15, no. 3. American Society of Plant Biologists, pp. 612–625, 2003.
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2002 | Published | Journal Article | IST-REx-ID: 2986
J. Friml, J. Wiśniewska, E. Benková, K. Mendgen, and K. Palme, “Lateral relocation of auxin efflux regulator PIN3 mediates tropism in Arabidopsis,” Nature, vol. 415, no. 6873. Nature Publishing Group, pp. 806–809, 2002.
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2002 | Published | Journal Article | IST-REx-ID: 2987 |

M. Souter et al., “Hydra mutants of Arabidopsis are defective in sterol profiles and auxin and ethylene signaling,” Plant Cell, vol. 14, no. 5. American Society of Plant Biologists, pp. 1017–1031, 2002.
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2002 | Published | Journal Article | IST-REx-ID: 2988
M. Grebe et al., “Cell polarity signaling in Arabidopsis involves a BFA sensitive auxin influx pathway,” Current Biology, vol. 12, no. 4. Cell Press, pp. 329–334, 2002.
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2002 | Published | Journal Article | IST-REx-ID: 2989
J. Friml et al., “AtPIN4 mediates sink-driven auxin gradients and root patterning in Arabidopsis,” Cell, vol. 108, no. 5. Cell Press, pp. 661–673, 2002.
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2001 | Published | Journal Article | IST-REx-ID: 2981 |

A. Molendijk et al., “Arabidopsis thaliana Rop GTPases are localized to tips of root hairs and control polar growth,” EMBO Journal, vol. 20, no. 11. Wiley-Blackwell, pp. 2779–2788, 2001.
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2001 | Published | Journal Article | IST-REx-ID: 2982 |

P. Gil et al., “BIG: A calossin-like protein required for polar auxin transport in Arabidopsis,” Genes and Development, vol. 15, no. 15. Cold Spring Harbor Laboratory Press, pp. 1985–1997, 2001.
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2001 | Published | Journal Article | IST-REx-ID: 2983
N. Geldner, J. Friml, Y. Stierhof, G. Jürgens, and K. Palme, “Auxin transport inhibitors block PIN1 cycling and vesicle trafficking,” Nature, vol. 413, no. 6854. Nature Publishing Group, pp. 425–428, 2001.
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2001 | Published | Journal Article | IST-REx-ID: 2984 |

R. Swarup et al., “Localization of the auxin permease AUX1 suggests two functionally distinct hormone transport pathways operate in the Arabidopsis root apex,” Genes and Development, vol. 15, no. 20. Cold Spring Harbor Laboratory Press, pp. 2648–2653, 2001.
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2001 | Published | Journal Article | IST-REx-ID: 2985
L. Trnková, J. Friml, and O. Dračka, “Elimination voltammetry of adenine and cytosine mixtures,” Bioelectrochemistry, vol. 54, no. 2. Elsevier, pp. 131–136, 2001.
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1995 | Published | Book Chapter | IST-REx-ID: 2465
D. Morris, J. Friml, and E. Zažímalová, “Auxin transport,” in Plant Hormones: Biosynthesis, Signal Transduction, Action!, P. Davies, Ed. Kluwer, 1995, pp. 451–484.
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