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Céline Camila Coraly Bräutigam

Bahti Zakirov

Anuj Patel

Gasper Tkacik

Ekaterina Maksimova

Krishnan Iyer

Athina Diakogianni

Reka Borbely

Julian Renaud

Puzhen Xia

Gábor Lengyel

Alexis Benichou

Simon Rella

Natalia Ruzickova

Sofia Backlund

Tetiana Rabiichuk

David Brückner

Cristina Savin

Georg Martius

Moritz Lang

Anna Andersson

Daniele De Martino

Sreyam Sengupta

Katarina Bodova

Matthew Chalk

Heloisa Chiossi

Remy Chait

Georg Rieckh

Bor Kavcic

Anna Levina (Martius)

Gabriel Mitchell

Tamar Friedlander

Sarah Cepeda Humerez

Thomas Sokolowski

Roshan Prizak

Jan Humplik

Michal Hledik

Vicent Botella Soler

Aditya Gilra

Mantas Gabrielaitis

Rok Grah

Jakob Ruess

Fabrizio Lombardi



182 Publications

2017 | Published | Journal Article | IST-REx-ID: 955 | OA
Friedlander, Tamar, Roshan Prizak, Nicholas H Barton, and Gašper Tkačik. “Evolution of New Regulatory Functions on Biophysically Realistic Fitness Landscapes.” Nature Communications. Nature Publishing Group, 2017. https://doi.org/10.1038/s41467-017-00238-8.
[Published Version] View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 959 | OA
De Martino, Daniele. “Scales and Multimodal Flux Distributions in Stationary Metabolic Network Models via Thermodynamics.” Physical Review E Statistical Nonlinear and Soft Matter Physics . American Institute of Physics, 2017. https://doi.org/10.1103/PhysRevE.95.062419.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 1007 | OA
Lang, Moritz, and Eduardo Sontag. “Zeros of Nonlinear Systems with Input Invariances.” Automatica. International Federation of Automatic Control, 2017. https://doi.org/10.1016/j.automatica.2017.03.030.
[Published Version] View | Files available | DOI | WoS
 
2017 | Research Data Reference | IST-REx-ID: 9709 | OA
Prentice, Jason, Olivier Marre, Mark Ioffe, Adrianna Loback, Gašper Tkačik, and Michael Berry. “Data from: Error-Robust Modes of the Retinal Population Code.” Dryad, 2017. https://doi.org/10.5061/dryad.1f1rc.
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
2017 | Research Data Reference | IST-REx-ID: 9855
Chalk, Matthew J, Paul Masset, Boris Gutkin, and Sophie Denève. “Supplementary Appendix.” Public Library of Science, 2017. https://doi.org/10.1371/journal.pcbi.1005582.s001.
[Published Version] View | Files available | DOI
 
2017 | Published | Journal Article | IST-REx-ID: 993 | OA
Levina (Martius), Anna, and Viola Priesemann. “Subsampling Scaling.” Nature Communications. Nature Publishing Group, 2017. https://doi.org/10.1038/ncomms15140.
[Published Version] View | Files available | DOI | WoS
 
2016 | Published | Conference Paper | IST-REx-ID: 1082 | OA
Chalk, Matthew J, Olivier Marre, and Gašper Tkačik. “Relevant Sparse Codes with Variational Information Bottleneck,” 29:1965–73. Neural Information Processing Systems, 2016.
[Preprint] View | Files available | Download Preprint (ext.)
 
2016 | Published | Conference Paper | IST-REx-ID: 1105
Savin, Cristina, and Gašper Tkačik. “Estimating Nonlinear Neural Response Functions Using GP Priors and Kronecker Methods,” 29:3610–18. Neural Information Processing Systems, 2016.
View | Download None (ext.)
 
2016 | Published | Thesis | PhD | IST-REx-ID: 1128 | OA
Rieckh, Georg. “Studying the Complexities of Transcriptional Regulation.” Institute of Science and Technology Austria, 2016.
[Published Version] View | Files available
 
2016 | Published | Journal Article | IST-REx-ID: 1148
Schilling, Christian, Sergiy Bogomolov, Thomas A Henzinger, Andreas Podelski, and Jakob Ruess. “Adaptive Moment Closure for Parameter Inference of Biochemical Reaction Networks.” Biosystems. Elsevier, 2016. https://doi.org/10.1016/j.biosystems.2016.07.005.
View | Files available | DOI
 
2016 | Published | Journal Article | IST-REx-ID: 1170
Lang, Moritz, and Jörg Stelling. “Modular Parameter Identification of Biomolecular Networks.” SIAM Journal on Scientific Computing. Society for Industrial and Applied Mathematics , 2016. https://doi.org/10.1137/15M103306X.
[Submitted Version] View | Files available | DOI
 
2016 | Published | Journal Article | IST-REx-ID: 1171
Tkačik, Gašper. “Understanding Regulatory Networks Requires More than Computing a Multitude of Graph Statistics: Comment on "Drivers of Structural Features in Gene Regulatory Networks: From Biophysical Constraints to Biological Function" by O. C. Martin et Al.” Physics of Life Reviews. Elsevier, 2016. https://doi.org/10.1016/j.plrev.2016.06.005.
View | DOI
 
2016 | Published | Conference Paper | IST-REx-ID: 8094 | OA
Martius, Georg S, Rafael Hostettler, Alois Knoll, and Ralf Der. “Self-Organized Control of an Tendon Driven Arm by Differential Extrinsic Plasticity.” In Proceedings of the Artificial Life Conference 2016, 28:142–43. MIT Press, 2016. https://doi.org/10.7551/978-0-262-33936-0-ch029.
[Published Version] View | Files available | DOI
 
2016 | Published | Journal Article | IST-REx-ID: 1485 | OA
De Martino, Daniele. “Genome-Scale Estimate of the Metabolic Turnover of E. Coli from the Energy Balance Analysis.” Physical Biology. IOP Publishing Ltd., 2016. https://doi.org/10.1088/1478-3975/13/1/016003.
[Preprint] View | DOI | Download Preprint (ext.)
 
2016 | Published | Conference Paper | IST-REx-ID: 1320
Lang, Moritz, and Eduardo Sontag. “Scale-Invariant Systems Realize Nonlinear Differential Operators,” Vol. 2016–July. IEEE, 2016. https://doi.org/10.1109/ACC.2016.7526722.
[Preprint] View | Files available | DOI
 
2016 | Published | Journal Article | IST-REx-ID: 1332 | OA
Chait, Remy P, Adam Palmer, Idan Yelin, and Roy Kishony. “Pervasive Selection for and against Antibiotic Resistance in Inhomogeneous Multistress Environments.” Nature Communications. Nature Publishing Group, 2016. https://doi.org/10.1038/ncomms10333.
[Published Version] View | Files available | DOI
 
2016 | Published | Journal Article | IST-REx-ID: 1342 | OA
Baym, Michael, Tami Lieberman, Eric Kelsic, Remy P Chait, Rotem Gross, Idan Yelin, and Roy Kishony. “Spatiotemporal Microbial Evolution on Antibiotic Landscapes.” Science. American Association for the Advancement of Science, 2016. https://doi.org/10.1126/science.aag0822.
[Preprint] View | DOI | Download Preprint (ext.)
 
2016 | Published | Journal Article | IST-REx-ID: 1358 | OA
Friedlander, Tamar, Roshan Prizak, Calin C Guet, Nicholas H Barton, and Gašper Tkačik. “Intrinsic Limits to Gene Regulation by Global Crosstalk.” Nature Communications. Nature Publishing Group, 2016. https://doi.org/10.1038/ncomms12307.
[Published Version] View | Files available | DOI
 
2016 | Published | Journal Article | IST-REx-ID: 1394 | OA
De Martino, Daniele, Fabrizio Capuani, and Andrea De Martino. “Growth against Entropy in Bacterial Metabolism: The Phenotypic Trade-off behind Empirical Growth Rate Distributions in E. Coli.” Physical Biology. IOP Publishing Ltd., 2016. https://doi.org/10.1088/1478-3975/13/3/036005.
[Preprint] View | DOI | Download Preprint (ext.)
 
2016 | Published | Journal Article | IST-REx-ID: 1420 | OA
Bodova, Katarina, Gašper Tkačik, and Nicholas H Barton. “A General Approximation for the Dynamics of Quantitative Traits.” Genetics. Genetics Society of America, 2016. https://doi.org/10.1534/genetics.115.184127.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

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