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4966 Publications


2017 | Published | Journal Article | IST-REx-ID: 946 | OA
Live tracking of moving samples in confocal microscopy for vertically grown roots
D. von Wangenheim, R. Hauschild, M. Fendrych, V. Barone, E. Benková, J. Friml, ELife 6 (2017).
[Published Version] View | Files available | DOI | WoS
 

2017 | Published | Journal Article | IST-REx-ID: 947 | OA
Quantifying the entropic cost of cellular growth control
D. De Martino, F. Capuani, A. De Martino, Physical Review E Statistical Nonlinear and Soft Matter Physics 96 (2017).
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 

2017 | Published | Conference Paper | IST-REx-ID: 949 | OA
JTDec: A tool for tree decompositions in soot
K. Chatterjee, A.K. Goharshady, A. Pavlogiannis, in:, D. D’Souza (Ed.), Springer, 2017, pp. 59–66.
[Submitted Version] View | Files available | DOI | WoS
 

2017 | Published | Conference Paper | IST-REx-ID: 950 | OA
Infinite-duration bidding games
G. Avni, T.A. Henzinger, V.K. Chonev, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
[Published Version] View | Files available | DOI | arXiv
 

2017 | Published | Journal Article | IST-REx-ID: 9506 | OA
An evolutionary case for functional gene body methylation in plants and animals
D. Zilberman, Genome Biology 18 (2017).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2017 | Published | Journal Article | IST-REx-ID: 951 | OA
Local introduction and heterogeneous spatial spread of dengue-suppressing Wolbachia through an urban population of Aedes Aegypti
T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, PLoS Biology 15 (2017).
[Published Version] View | Files available | DOI | WoS
 

2017 | Published | Journal Article | IST-REx-ID: 952 | OA
Deploying dengue-suppressing Wolbachia: Robust models predict slow but effective spatial spread in Aedes aegypti
M. Turelli, N.H. Barton, Theoretical Population Biology 115 (2017) 45–60.
[Submitted Version] View | Files available | DOI | PubMed | Europe PMC
 

2017 | Published | Journal Article | IST-REx-ID: 953 | OA
The sources of adaptive evolution
D. Charlesworth, N.H. Barton, B. Charlesworth, Proceedings of the Royal Society of London Series B Biological Sciences 284 (2017).
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 

2017 | Published | Journal Article | IST-REx-ID: 954 | OA
On the mechanistic nature of epistasis in a canonical cis-regulatory element
M. Lagator, T. Paixao, N.H. Barton, J.P. Bollback, C.C. Guet, ELife 6 (2017).
[Published Version] View | Files available | DOI | WoS
 

2017 | Published | Journal Article | IST-REx-ID: 955 | OA
Evolution of new regulatory functions on biophysically realistic fitness landscapes
T. Friedlander, R. Prizak, N.H. Barton, G. Tkačik, Nature Communications 8 (2017).
[Published Version] View | Files available | DOI | WoS
 

2017 | Published | Journal Article | IST-REx-ID: 956 | OA
Gradient flow and entropy inequalities for quantum Markov semigroups with detailed balance
E. Carlen, J. Maas, Journal of Functional Analysis 273 (2017) 1810–1869.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 

2017 | Published | Book Chapter | IST-REx-ID: 957
Ancestral protein reconstruction and circular permutation for improving the stability and dynamic range of FRET sensors
B. Clifton, J. Whitfield, I. Sanchez-Romero, M. Herde, C. Henneberger, H.L. Janovjak, C. Jackson, in:, V. Stein (Ed.), Synthetic Protein Switches, Springer, 2017, pp. 71–87.
View | DOI
 

2017 | Published | Book Chapter | IST-REx-ID: 958
Method for developing optical sensors using a synthetic dye fluorescent protein FRET pair and computational modeling and assessment
J. Mitchell, W. Zhang, M. Herde, C. Henneberger, H.L. Janovjak, M. O’Mara, C. Jackson, in:, V. Stein (Ed.), Synthetic Protein Switches, Springer, 2017, pp. 89–99.
View | DOI
 

2017 | Published | Journal Article | IST-REx-ID: 959 | OA
Scales and multimodal flux distributions in stationary metabolic network models via thermodynamics
D. De Martino, Physical Review E Statistical Nonlinear and Soft Matter Physics 95 (2017) 062419.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 

2017 | Published | Journal Article | IST-REx-ID: 960 | OA
Cell polarity in cerebral cortex development - cellular architecture shaped by biochemical networks
A.H. Hansen, C.F. Düllberg, C. Mieck, M. Loose, S. Hippenmeyer, Frontiers in Cellular Neuroscience 11 (2017).
[Published Version] View | Files available | DOI | WoS
 

2017 | Published | Thesis | PhD | IST-REx-ID: 961 | OA
Cell adhesion and cell fate: An effective feedback loop during zebrafish gastrulation
V. Barone, Cell Adhesion and Cell Fate: An Effective Feedback Loop during Zebrafish Gastrulation, Institute of Science and Technology Austria, 2017.
[Published Version] View | Files available | DOI
 

2017 | Published | Conference Paper | IST-REx-ID: 962
Model counting for recursively-defined strings
M. Trinh, D.H. Chu, J. Jaffar, in:, R. Majumdar, V. Kunčak (Eds.), Springer, 2017, pp. 399–418.
View | DOI | WoS
 

2017 | Published | Conference Paper | IST-REx-ID: 963 | OA
Timed network games with clocks
G. Avni, S. Guha, O. Kupferman, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
[Published Version] View | Files available | DOI
 

2017 | Published | Conference Paper | IST-REx-ID: 1000 | OA
PixelCNN models with auxiliary variables for natural image modeling
A. Kolesnikov, C. Lampert, in:, 34th International Conference on Machine Learning, JMLR, 2017, pp. 1905–1914.
[Submitted Version] View | Download Submitted Version (ext.) | WoS | arXiv
 

2017 | Published | Conference Paper | IST-REx-ID: 1001 | OA
CurveUps: Shaping objects from flat plates with tension-actuated curvature
R. Guseinov, E. Miguel, B. Bickel, in:, ACM, 2017.
[Submitted Version] View | Files available | DOI | WoS
 

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