{"publication_status":"published","date_published":"2014-10-12T00:00:00Z","abstract":[{"lang":"eng","text":"Understanding the dynamics of noisy neurons remains an important challenge in neuroscience. Here, we describe a simple probabilistic model that accurately describes the firing behavior in a large class (type II) of neurons. To demonstrate the usefulness of this model, we show how it accurately predicts the interspike interval (ISI) distributions, bursting patterns and mean firing rates found by: (1) simulations of the classic Hodgkin-Huxley model with channel noise, (2) experimental data from squid giant axon with a noisy input current and (3) experimental data on noisy firing from a neuron within the suprachiasmatic nucleus (SCN). This simple model has 6 parameters, however, in some cases, two of these parameters are coupled and only 5 parameters account for much of the known behavior. From these parameters, many properties of spiking can be found through simple calculation. Thus, we show how the complex effects of noise can be understood through a simple and general probabilistic model."}],"department":[{"_id":"GaTk"}],"day":"12","file":[{"content_type":"application/pdf","file_name":"IST-2016-444-v1+1_1-s2.0-S0022519314005888-main.pdf","access_level":"open_access","creator":"system","relation":"main_file","checksum":"a9dbae18d3233b3dab6944fd3f2cd49e","file_id":"5316","date_created":"2018-12-12T10:17:58Z","file_size":2679222,"date_updated":"2020-07-14T12:45:25Z"}],"type":"journal_article","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","image":"/images/cc_by_nc_nd.png","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","short":"CC BY-NC-ND (4.0)"},"date_updated":"2022-08-25T14:00:47Z","article_processing_charge":"No","month":"10","related_material":{"link":[{"url":"https://doi.org/10.1016/j.jtbi.2015.03.013","relation":"erratum"}]},"status":"public","quality_controlled":"1","title":"Characterizing spiking in noisy type II neurons","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","date_created":"2018-12-11T11:55:18Z","oa":1,"oa_version":"Published Version","scopus_import":"1","publisher":"Academic Press","citation":{"ama":"Bodova K, Paydarfar D, Forger D. Characterizing spiking in noisy type II neurons. <i> Journal of Theoretical Biology</i>. 2014;365:40-54. doi:<a href=\"https://doi.org/10.1016/j.jtbi.2014.09.041\">10.1016/j.jtbi.2014.09.041</a>","chicago":"Bodova, Katarina, David Paydarfar, and Daniel Forger. “Characterizing Spiking in Noisy Type II Neurons.” <i> Journal of Theoretical Biology</i>. Academic Press, 2014. <a href=\"https://doi.org/10.1016/j.jtbi.2014.09.041\">https://doi.org/10.1016/j.jtbi.2014.09.041</a>.","apa":"Bodova, K., Paydarfar, D., &#38; Forger, D. (2014). Characterizing spiking in noisy type II neurons. <i> Journal of Theoretical Biology</i>. Academic Press. <a href=\"https://doi.org/10.1016/j.jtbi.2014.09.041\">https://doi.org/10.1016/j.jtbi.2014.09.041</a>","ista":"Bodova K, Paydarfar D, Forger D. 2014. Characterizing spiking in noisy type II neurons.  Journal of Theoretical Biology. 365, 40–54.","short":"K. Bodova, D. Paydarfar, D. Forger,  Journal of Theoretical Biology 365 (2014) 40–54.","mla":"Bodova, Katarina, et al. “Characterizing Spiking in Noisy Type II Neurons.” <i> Journal of Theoretical Biology</i>, vol. 365, Academic Press, 2014, pp. 40–54, doi:<a href=\"https://doi.org/10.1016/j.jtbi.2014.09.041\">10.1016/j.jtbi.2014.09.041</a>.","ieee":"K. Bodova, D. Paydarfar, and D. Forger, “Characterizing spiking in noisy type II neurons,” <i> Journal of Theoretical Biology</i>, vol. 365. Academic Press, pp. 40–54, 2014."},"language":[{"iso":"eng"}],"pubrep_id":"444","_id":"2028","page":"40 - 54","doi":"10.1016/j.jtbi.2014.09.041","publication":" Journal of Theoretical Biology","author":[{"orcid":"0000-0002-7214-0171","full_name":"Bodova, Katarina","id":"2BA24EA0-F248-11E8-B48F-1D18A9856A87","last_name":"Bodova","first_name":"Katarina"},{"last_name":"Paydarfar","first_name":"David","full_name":"Paydarfar, David"},{"full_name":"Forger, Daniel","last_name":"Forger","first_name":"Daniel"}],"has_accepted_license":"1","acknowledgement":"This work is supported by AFOSR grant FA 9550-11-1-0165, program grant RPG 24/2012 from the Human Frontiers of Science (DBF) and travel support from the European Commission Marie Curie International Reintegration Grant PIRG04-GA-2008-239429 (KB). DP was supported by NIHR01 GM104987 and the Wyss Institute of Biologically Inspired Engineering. ","file_date_updated":"2020-07-14T12:45:25Z","ddc":["570"],"publist_id":"5043","volume":365,"intvolume":"       365","year":"2014"}