---
_id: '9808'
abstract:
- lang: eng
  text: Table S4. Counts per Gene per Million Reads Mapped. (XLSX 2751 kb).
article_processing_charge: No
author:
- first_name: Juan
  full_name: Higareda Almaraz, Juan
  last_name: Higareda Almaraz
- first_name: Michael
  full_name: Karbiener, Michael
  last_name: Karbiener
- first_name: Maude
  full_name: Giroud, Maude
  last_name: Giroud
- first_name: Florian
  full_name: Pauler, Florian
  id: 48EA0138-F248-11E8-B48F-1D18A9856A87
  last_name: Pauler
  orcid: 0000-0002-7462-0048
- first_name: Teresa
  full_name: Gerhalter, Teresa
  last_name: Gerhalter
- first_name: Stephan
  full_name: Herzig, Stephan
  last_name: Herzig
- first_name: Marcel
  full_name: Scheideler, Marcel
  last_name: Scheideler
citation:
  ama: 'Higareda Almaraz J, Karbiener M, Giroud M, et al. Additional file 3: Of Norepinephrine
    triggers an immediate-early regulatory network response in primary human white
    adipocytes. 2018. doi:<a href="https://doi.org/10.6084/m9.figshare.7295369.v1">10.6084/m9.figshare.7295369.v1</a>'
  apa: 'Higareda Almaraz, J., Karbiener, M., Giroud, M., Pauler, F., Gerhalter, T.,
    Herzig, S., &#38; Scheideler, M. (2018). Additional file 3: Of Norepinephrine
    triggers an immediate-early regulatory network response in primary human white
    adipocytes. Springer Nature. <a href="https://doi.org/10.6084/m9.figshare.7295369.v1">https://doi.org/10.6084/m9.figshare.7295369.v1</a>'
  chicago: 'Higareda Almaraz, Juan, Michael Karbiener, Maude Giroud, Florian Pauler,
    Teresa Gerhalter, Stephan Herzig, and Marcel Scheideler. “Additional File 3: Of
    Norepinephrine Triggers an Immediate-Early Regulatory Network Response in Primary
    Human White Adipocytes.” Springer Nature, 2018. <a href="https://doi.org/10.6084/m9.figshare.7295369.v1">https://doi.org/10.6084/m9.figshare.7295369.v1</a>.'
  ieee: 'J. Higareda Almaraz <i>et al.</i>, “Additional file 3: Of Norepinephrine
    triggers an immediate-early regulatory network response in primary human white
    adipocytes.” Springer Nature, 2018.'
  ista: 'Higareda Almaraz J, Karbiener M, Giroud M, Pauler F, Gerhalter T, Herzig
    S, Scheideler M. 2018. Additional file 3: Of Norepinephrine triggers an immediate-early
    regulatory network response in primary human white adipocytes, Springer Nature,
    <a href="https://doi.org/10.6084/m9.figshare.7295369.v1">10.6084/m9.figshare.7295369.v1</a>.'
  mla: 'Higareda Almaraz, Juan, et al. <i>Additional File 3: Of Norepinephrine Triggers
    an Immediate-Early Regulatory Network Response in Primary Human White Adipocytes</i>.
    Springer Nature, 2018, doi:<a href="https://doi.org/10.6084/m9.figshare.7295369.v1">10.6084/m9.figshare.7295369.v1</a>.'
  short: J. Higareda Almaraz, M. Karbiener, M. Giroud, F. Pauler, T. Gerhalter, S.
    Herzig, M. Scheideler, (2018).
date_created: 2021-08-06T12:31:57Z
date_published: 2018-11-03T00:00:00Z
date_updated: 2023-09-13T09:10:47Z
day: '03'
department:
- _id: SiHi
doi: 10.6084/m9.figshare.7295369.v1
main_file_link:
- open_access: '1'
  url: https://doi.org/10.6084/m9.figshare.7295369.v1
month: '11'
oa: 1
oa_version: Published Version
publisher: Springer Nature
related_material:
  record:
  - id: '20'
    relation: used_in_publication
    status: public
status: public
title: 'Additional file 3: Of Norepinephrine triggers an immediate-early regulatory
  network response in primary human white adipocytes'
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2018'
...
---
_id: '805'
abstract:
- lang: eng
  text: During corticogenesis, distinct classes of neurons are born from progenitor
    cells located in the ventricular and subventricular zones, from where they migrate
    towards the pial surface to assemble into highly organized layer-specific circuits.
    However, the precise and coordinated transcriptional network activity defining
    neuronal identity is still not understood. Here, we show that genetic depletion
    of the basic helix-loop-helix (bHLH) transcription factor E2A splice variant E47
    increased the number of Tbr1-positive deep layer and Satb2-positive upper layer
    neurons at E14.5, while depletion of the alternatively spliced E12 variant did
    not affect layer-specific neurogenesis. While ChIP-Seq identified a big overlap
    for E12- and E47-specific binding sites in embryonic NSCs, including sites at
    the cyclin-dependent kinase inhibitor (CDKI) Cdkn1c gene locus, RNA-Seq revealed
    a unique transcriptional regulation by each splice variant. E47 activated the
    expression of the CDKI Cdkn1c through binding to a distal enhancer. Finally, overexpression
    of E47 in embryonic NSCs in vitro impaired neurite outgrowth and E47 overexpression
    in vivo by in utero electroporation disturbed proper layer-specific neurogenesis
    and upregulated p57(KIP2) expression. Overall, this study identified E2A target
    genes in embryonic NSCs and demonstrates that E47 regulates neuronal differentiation
    via p57(KIP2).
article_processing_charge: No
author:
- first_name: Sabrina
  full_name: Pfurr, Sabrina
  last_name: Pfurr
- first_name: Yu
  full_name: Chu, Yu
  last_name: Chu
- first_name: Christian
  full_name: Bohrer, Christian
  last_name: Bohrer
- first_name: Franziska
  full_name: Greulich, Franziska
  last_name: Greulich
- first_name: Robert J
  full_name: Beattie, Robert J
  id: 2E26DF60-F248-11E8-B48F-1D18A9856A87
  last_name: Beattie
  orcid: 0000-0002-8483-8753
- first_name: Könül
  full_name: Mammadzada, Könül
  last_name: Mammadzada
- first_name: Miriam
  full_name: Hils, Miriam
  last_name: Hils
- first_name: Sebastian
  full_name: Arnold, Sebastian
  last_name: Arnold
- first_name: Verdon
  full_name: Taylor, Verdon
  last_name: Taylor
- first_name: Kristina
  full_name: Schachtrup, Kristina
  last_name: Schachtrup
- first_name: N Henriette
  full_name: Uhlenhaut, N Henriette
  last_name: Uhlenhaut
- first_name: Christian
  full_name: Schachtrup, Christian
  last_name: Schachtrup
citation:
  ama: Pfurr S, Chu Y, Bohrer C, et al. The E2A splice variant E47 regulates the differentiation
    of projection neurons via p57(KIP2) during cortical development. <i>Development</i>.
    2017;144:3917-3931. doi:<a href="https://doi.org/10.1242/dev.145698">10.1242/dev.145698</a>
  apa: Pfurr, S., Chu, Y., Bohrer, C., Greulich, F., Beattie, R. J., Mammadzada, K.,
    … Schachtrup, C. (2017). The E2A splice variant E47 regulates the differentiation
    of projection neurons via p57(KIP2) during cortical development. <i>Development</i>.
    Company of Biologists. <a href="https://doi.org/10.1242/dev.145698">https://doi.org/10.1242/dev.145698</a>
  chicago: Pfurr, Sabrina, Yu Chu, Christian Bohrer, Franziska Greulich, Robert J
    Beattie, Könül Mammadzada, Miriam Hils, et al. “The E2A Splice Variant E47 Regulates
    the Differentiation of Projection Neurons via P57(KIP2) during Cortical Development.”
    <i>Development</i>. Company of Biologists, 2017. <a href="https://doi.org/10.1242/dev.145698">https://doi.org/10.1242/dev.145698</a>.
  ieee: S. Pfurr <i>et al.</i>, “The E2A splice variant E47 regulates the differentiation
    of projection neurons via p57(KIP2) during cortical development,” <i>Development</i>,
    vol. 144. Company of Biologists, pp. 3917–3931, 2017.
  ista: Pfurr S, Chu Y, Bohrer C, Greulich F, Beattie RJ, Mammadzada K, Hils M, Arnold
    S, Taylor V, Schachtrup K, Uhlenhaut NH, Schachtrup C. 2017. The E2A splice variant
    E47 regulates the differentiation of projection neurons via p57(KIP2) during cortical
    development. Development. 144, 3917–3931.
  mla: Pfurr, Sabrina, et al. “The E2A Splice Variant E47 Regulates the Differentiation
    of Projection Neurons via P57(KIP2) during Cortical Development.” <i>Development</i>,
    vol. 144, Company of Biologists, 2017, pp. 3917–31, doi:<a href="https://doi.org/10.1242/dev.145698">10.1242/dev.145698</a>.
  short: S. Pfurr, Y. Chu, C. Bohrer, F. Greulich, R.J. Beattie, K. Mammadzada, M.
    Hils, S. Arnold, V. Taylor, K. Schachtrup, N.H. Uhlenhaut, C. Schachtrup, Development
    144 (2017) 3917–3931.
date_created: 2018-12-11T11:48:36Z
date_published: 2017-10-31T00:00:00Z
date_updated: 2023-09-26T16:20:09Z
day: '31'
department:
- _id: SiHi
doi: 10.1242/dev.145698
external_id:
  isi:
  - '000414025600007'
intvolume: '       144'
isi: 1
language:
- iso: eng
month: '10'
oa_version: None
page: 3917 - 3931
publication: Development
publication_status: published
publisher: Company of Biologists
publist_id: '6846'
quality_controlled: '1'
scopus_import: '1'
status: public
title: The E2A splice variant E47 regulates the differentiation of projection neurons
  via p57(KIP2) during cortical development
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 144
year: '2017'
...
---
_id: '713'
abstract:
- lang: eng
  text: To determine the dynamics of allelic-specific expression during mouse development,
    we analyzed RNA-seq data from 23 F1 tissues from different developmental stages,
    including 19 female tissues allowing X chromosome inactivation (XCI) escapers
    to also be detected. We demonstrate that allelic expression arising from genetic
    or epigenetic differences is highly tissue-specific. We find that tissue-specific
    strain-biased gene expression may be regulated by tissue-specific enhancers or
    by post-transcriptional differences in stability between the alleles. We also
    find that escape from X-inactivation is tissue-specific, with leg muscle showing
    an unexpectedly high rate of XCI escapers. By surveying a range of tissues during
    development, and performing extensive validation, we are able to provide a high
    confidence list of mouse imprinted genes including 18 novel genes. This shows
    that cluster size varies dynamically during development and can be substantially
    larger than previously thought, with the Igf2r cluster extending over 10 Mb in
    placenta.
article_number: e25125
author:
- first_name: Daniel
  full_name: Andergassen, Daniel
  last_name: Andergassen
- first_name: Christoph
  full_name: Dotter, Christoph
  id: 4C66542E-F248-11E8-B48F-1D18A9856A87
  last_name: Dotter
- first_name: Dyniel
  full_name: Wenzel, Dyniel
  last_name: Wenzel
- first_name: Verena
  full_name: Sigl, Verena
  last_name: Sigl
- first_name: Philipp
  full_name: Bammer, Philipp
  last_name: Bammer
- first_name: Markus
  full_name: Muckenhuber, Markus
  last_name: Muckenhuber
- first_name: Daniela
  full_name: Mayer, Daniela
  last_name: Mayer
- first_name: Tomasz
  full_name: Kulinski, Tomasz
  last_name: Kulinski
- first_name: Hans
  full_name: Theussl, Hans
  last_name: Theussl
- first_name: Josef
  full_name: Penninger, Josef
  last_name: Penninger
- first_name: Christoph
  full_name: Bock, Christoph
  last_name: Bock
- first_name: Denise
  full_name: Barlow, Denise
  last_name: Barlow
- first_name: Florian
  full_name: Pauler, Florian
  id: 48EA0138-F248-11E8-B48F-1D18A9856A87
  last_name: Pauler
- first_name: Quanah
  full_name: Hudson, Quanah
  last_name: Hudson
citation:
  ama: Andergassen D, Dotter C, Wenzel D, et al. Mapping the mouse Allelome reveals
    tissue specific regulation of allelic expression. <i>eLife</i>. 2017;6. doi:<a
    href="https://doi.org/10.7554/eLife.25125">10.7554/eLife.25125</a>
  apa: Andergassen, D., Dotter, C., Wenzel, D., Sigl, V., Bammer, P., Muckenhuber,
    M., … Hudson, Q. (2017). Mapping the mouse Allelome reveals tissue specific regulation
    of allelic expression. <i>ELife</i>. eLife Sciences Publications. <a href="https://doi.org/10.7554/eLife.25125">https://doi.org/10.7554/eLife.25125</a>
  chicago: Andergassen, Daniel, Christoph Dotter, Dyniel Wenzel, Verena Sigl, Philipp
    Bammer, Markus Muckenhuber, Daniela Mayer, et al. “Mapping the Mouse Allelome
    Reveals Tissue Specific Regulation of Allelic Expression.” <i>ELife</i>. eLife
    Sciences Publications, 2017. <a href="https://doi.org/10.7554/eLife.25125">https://doi.org/10.7554/eLife.25125</a>.
  ieee: D. Andergassen <i>et al.</i>, “Mapping the mouse Allelome reveals tissue specific
    regulation of allelic expression,” <i>eLife</i>, vol. 6. eLife Sciences Publications,
    2017.
  ista: Andergassen D, Dotter C, Wenzel D, Sigl V, Bammer P, Muckenhuber M, Mayer
    D, Kulinski T, Theussl H, Penninger J, Bock C, Barlow D, Pauler F, Hudson Q. 2017.
    Mapping the mouse Allelome reveals tissue specific regulation of allelic expression.
    eLife. 6, e25125.
  mla: Andergassen, Daniel, et al. “Mapping the Mouse Allelome Reveals Tissue Specific
    Regulation of Allelic Expression.” <i>ELife</i>, vol. 6, e25125, eLife Sciences
    Publications, 2017, doi:<a href="https://doi.org/10.7554/eLife.25125">10.7554/eLife.25125</a>.
  short: D. Andergassen, C. Dotter, D. Wenzel, V. Sigl, P. Bammer, M. Muckenhuber,
    D. Mayer, T. Kulinski, H. Theussl, J. Penninger, C. Bock, D. Barlow, F. Pauler,
    Q. Hudson, ELife 6 (2017).
date_created: 2018-12-11T11:48:05Z
date_published: 2017-08-14T00:00:00Z
date_updated: 2021-01-12T08:11:57Z
day: '14'
ddc:
- '576'
department:
- _id: GaNo
- _id: SiHi
doi: 10.7554/eLife.25125
file:
- access_level: open_access
  checksum: 1ace3462e64a971b9ead896091829549
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:13:36Z
  date_updated: 2020-07-14T12:47:50Z
  file_id: '5020'
  file_name: IST-2017-885-v1+1_elife-25125-figures-v2.pdf
  file_size: 6399510
  relation: main_file
- access_level: open_access
  checksum: 6241dc31eeb87b03facadec3a53a6827
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:13:36Z
  date_updated: 2020-07-14T12:47:50Z
  file_id: '5021'
  file_name: IST-2017-885-v1+2_elife-25125-v2.pdf
  file_size: 4264398
  relation: main_file
file_date_updated: 2020-07-14T12:47:50Z
has_accepted_license: '1'
intvolume: '         6'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
project:
- _id: 25E9AF9E-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P27201-B22
  name: Revealing the mechanisms underlying drug interactions
publication: eLife
publication_identifier:
  issn:
  - 2050084X
publication_status: published
publisher: eLife Sciences Publications
publist_id: '6971'
pubrep_id: '885'
quality_controlled: '1'
scopus_import: 1
status: public
title: Mapping the mouse Allelome reveals tissue specific regulation of allelic expression
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 6
year: '2017'
...
---
_id: '621'
abstract:
- lang: eng
  text: The mammalian cerebral cortex is responsible for higher cognitive functions
    such as perception, consciousness, and acquiring and processing information. The
    neocortex is organized into six distinct laminae, each composed of a rich diversity
    of cell types which assemble into highly complex cortical circuits. Radial glia
    progenitors (RGPs) are responsible for producing all neocortical neurons and certain
    glia lineages. Here, we discuss recent discoveries emerging from clonal lineage
    analysis at the single RGP cell level that provide us with an inaugural quantitative
    framework of RGP lineage progression. We further discuss the importance of the
    relative contribution of intrinsic gene functions and non-cell-autonomous or community
    effects in regulating RGP proliferation behavior and lineage progression.
article_processing_charge: Yes (in subscription journal)
author:
- first_name: Robert J
  full_name: Beattie, Robert J
  id: 2E26DF60-F248-11E8-B48F-1D18A9856A87
  last_name: Beattie
  orcid: 0000-0002-8483-8753
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
citation:
  ama: Beattie RJ, Hippenmeyer S. Mechanisms of radial glia progenitor cell lineage
    progression. <i>FEBS letters</i>. 2017;591(24):3993-4008. doi:<a href="https://doi.org/10.1002/1873-3468.12906">10.1002/1873-3468.12906</a>
  apa: Beattie, R. J., &#38; Hippenmeyer, S. (2017). Mechanisms of radial glia progenitor
    cell lineage progression. <i>FEBS Letters</i>. Wiley-Blackwell. <a href="https://doi.org/10.1002/1873-3468.12906">https://doi.org/10.1002/1873-3468.12906</a>
  chicago: Beattie, Robert J, and Simon Hippenmeyer. “Mechanisms of Radial Glia Progenitor
    Cell Lineage Progression.” <i>FEBS Letters</i>. Wiley-Blackwell, 2017. <a href="https://doi.org/10.1002/1873-3468.12906">https://doi.org/10.1002/1873-3468.12906</a>.
  ieee: R. J. Beattie and S. Hippenmeyer, “Mechanisms of radial glia progenitor cell
    lineage progression,” <i>FEBS letters</i>, vol. 591, no. 24. Wiley-Blackwell,
    pp. 3993–4008, 2017.
  ista: Beattie RJ, Hippenmeyer S. 2017. Mechanisms of radial glia progenitor cell
    lineage progression. FEBS letters. 591(24), 3993–4008.
  mla: Beattie, Robert J., and Simon Hippenmeyer. “Mechanisms of Radial Glia Progenitor
    Cell Lineage Progression.” <i>FEBS Letters</i>, vol. 591, no. 24, Wiley-Blackwell,
    2017, pp. 3993–4008, doi:<a href="https://doi.org/10.1002/1873-3468.12906">10.1002/1873-3468.12906</a>.
  short: R.J. Beattie, S. Hippenmeyer, FEBS Letters 591 (2017) 3993–4008.
date_created: 2018-12-11T11:47:32Z
date_published: 2017-12-01T00:00:00Z
date_updated: 2024-02-14T12:02:08Z
day: '01'
ddc:
- '571'
- '610'
department:
- _id: SiHi
doi: 10.1002/1873-3468.12906
ec_funded: 1
external_id:
  pmid:
  - '29121403'
file:
- access_level: open_access
  checksum: a46dadc84e0c28d389dd3e9e954464db
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:16:24Z
  date_updated: 2020-07-14T12:47:24Z
  file_id: '5211'
  file_name: IST-2018-928-v1+1_Beattie_et_al-2017-FEBS_Letters.pdf
  file_size: 644149
  relation: main_file
file_date_updated: 2020-07-14T12:47:24Z
has_accepted_license: '1'
intvolume: '       591'
issue: '24'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc/4.0/
month: '12'
oa: 1
oa_version: Published Version
page: 3993  - 4008
pmid: 1
project:
- _id: 25D7962E-B435-11E9-9278-68D0E5697425
  grant_number: RGP0053/2014
  name: Quantitative Structure-Function Analysis of Cerebral Cortex Assembly at Clonal
    Level
- _id: 25D61E48-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '618444'
  name: Molecular Mechanisms of Cerebral Cortex Development
publication: FEBS letters
publication_identifier:
  issn:
  - '00145793'
publication_status: published
publisher: Wiley-Blackwell
publist_id: '7183'
pubrep_id: '928'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Mechanisms of radial glia progenitor cell lineage progression
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
  short: CC BY-NC (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 591
year: '2017'
...
---
_id: '944'
abstract:
- lang: eng
  text: The concerted production of neurons and glia by neural stem cells (NSCs) is
    essential for neural circuit assembly. In the developing cerebral cortex, radial
    glia progenitors (RGPs) generate nearly all neocortical neurons and certain glia
    lineages. RGP proliferation behavior shows a high degree of non-stochasticity,
    thus a deterministic characteristic of neuron and glia production. However, the
    cellular and molecular mechanisms controlling RGP behavior and proliferation dynamics
    in neurogenesis and glia generation remain unknown. By using mosaic analysis with
    double markers (MADM)-based genetic paradigms enabling the sparse and global knockout
    with unprecedented single-cell resolution, we identified Lgl1 as a critical regulatory
    component. We uncover Lgl1-dependent tissue-wide community effects required for
    embryonic cortical neurogenesis and novel cell-autonomous Lgl1 functions controlling
    RGP-mediated glia genesis and postnatal NSC behavior. These results suggest that
    NSC-mediated neuron and glia production is tightly regulated through the concerted
    interplay of sequential Lgl1-dependent global and cell intrinsic mechanisms.
acknowledged_ssus:
- _id: Bio
- _id: PreCl
article_processing_charge: No
author:
- first_name: Robert J
  full_name: Beattie, Robert J
  id: 2E26DF60-F248-11E8-B48F-1D18A9856A87
  last_name: Beattie
  orcid: 0000-0002-8483-8753
- first_name: Maria P
  full_name: Postiglione, Maria P
  id: 2C67902A-F248-11E8-B48F-1D18A9856A87
  last_name: Postiglione
- first_name: Laura
  full_name: Burnett, Laura
  id: 3B717F68-F248-11E8-B48F-1D18A9856A87
  last_name: Burnett
  orcid: 0000-0002-8937-410X
- first_name: Susanne
  full_name: Laukoter, Susanne
  id: 2D6B7A9A-F248-11E8-B48F-1D18A9856A87
  last_name: Laukoter
  orcid: 0000-0002-7903-3010
- first_name: Carmen
  full_name: Streicher, Carmen
  id: 36BCB99C-F248-11E8-B48F-1D18A9856A87
  last_name: Streicher
- first_name: Florian
  full_name: Pauler, Florian
  id: 48EA0138-F248-11E8-B48F-1D18A9856A87
  last_name: Pauler
  orcid: 0000-0002-7462-0048
- first_name: Guanxi
  full_name: Xiao, Guanxi
  last_name: Xiao
- first_name: Olga
  full_name: Klezovitch, Olga
  last_name: Klezovitch
- first_name: Valeri
  full_name: Vasioukhin, Valeri
  last_name: Vasioukhin
- first_name: Troy
  full_name: Ghashghaei, Troy
  last_name: Ghashghaei
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
citation:
  ama: Beattie RJ, Postiglione MP, Burnett L, et al. Mosaic analysis with double markers
    reveals distinct sequential functions of Lgl1 in neural stem cells. <i>Neuron</i>.
    2017;94(3):517-533.e3. doi:<a href="https://doi.org/10.1016/j.neuron.2017.04.012">10.1016/j.neuron.2017.04.012</a>
  apa: Beattie, R. J., Postiglione, M. P., Burnett, L., Laukoter, S., Streicher, C.,
    Pauler, F., … Hippenmeyer, S. (2017). Mosaic analysis with double markers reveals
    distinct sequential functions of Lgl1 in neural stem cells. <i>Neuron</i>. Cell
    Press. <a href="https://doi.org/10.1016/j.neuron.2017.04.012">https://doi.org/10.1016/j.neuron.2017.04.012</a>
  chicago: Beattie, Robert J, Maria P Postiglione, Laura Burnett, Susanne Laukoter,
    Carmen Streicher, Florian Pauler, Guanxi Xiao, et al. “Mosaic Analysis with Double
    Markers Reveals Distinct Sequential Functions of Lgl1 in Neural Stem Cells.” <i>Neuron</i>.
    Cell Press, 2017. <a href="https://doi.org/10.1016/j.neuron.2017.04.012">https://doi.org/10.1016/j.neuron.2017.04.012</a>.
  ieee: R. J. Beattie <i>et al.</i>, “Mosaic analysis with double markers reveals
    distinct sequential functions of Lgl1 in neural stem cells,” <i>Neuron</i>, vol.
    94, no. 3. Cell Press, p. 517–533.e3, 2017.
  ista: Beattie RJ, Postiglione MP, Burnett L, Laukoter S, Streicher C, Pauler F,
    Xiao G, Klezovitch O, Vasioukhin V, Ghashghaei T, Hippenmeyer S. 2017. Mosaic
    analysis with double markers reveals distinct sequential functions of Lgl1 in
    neural stem cells. Neuron. 94(3), 517–533.e3.
  mla: Beattie, Robert J., et al. “Mosaic Analysis with Double Markers Reveals Distinct
    Sequential Functions of Lgl1 in Neural Stem Cells.” <i>Neuron</i>, vol. 94, no.
    3, Cell Press, 2017, p. 517–533.e3, doi:<a href="https://doi.org/10.1016/j.neuron.2017.04.012">10.1016/j.neuron.2017.04.012</a>.
  short: R.J. Beattie, M.P. Postiglione, L. Burnett, S. Laukoter, C. Streicher, F.
    Pauler, G. Xiao, O. Klezovitch, V. Vasioukhin, T. Ghashghaei, S. Hippenmeyer,
    Neuron 94 (2017) 517–533.e3.
date_created: 2018-12-11T11:49:20Z
date_published: 2017-05-03T00:00:00Z
date_updated: 2023-09-26T15:37:02Z
day: '03'
department:
- _id: SiHi
- _id: MaJö
doi: 10.1016/j.neuron.2017.04.012
ec_funded: 1
external_id:
  isi:
  - '000400466700011'
intvolume: '        94'
isi: 1
issue: '3'
language:
- iso: eng
month: '05'
oa_version: None
page: 517 - 533.e3
project:
- _id: 25D61E48-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '618444'
  name: Molecular Mechanisms of Cerebral Cortex Development
- _id: 25D7962E-B435-11E9-9278-68D0E5697425
  grant_number: RGP0053/2014
  name: Quantitative Structure-Function Analysis of Cerebral Cortex Assembly at Clonal
    Level
publication: Neuron
publication_identifier:
  issn:
  - '08966273'
publication_status: published
publisher: Cell Press
publist_id: '6473'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Mosaic analysis with double markers reveals distinct sequential functions of
  Lgl1 in neural stem cells
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 94
year: '2017'
...
---
_id: '960'
abstract:
- lang: eng
  text: The human cerebral cortex is the seat of our cognitive abilities and composed
    of an extraordinary number of neurons, organized in six distinct layers. The establishment
    of specific morphological and physiological features in individual neurons needs
    to be regulated with high precision. Impairments in the sequential developmental
    programs instructing corticogenesis lead to alterations in the cortical cytoarchitecture
    which is thought to represent the major underlying cause for several neurological
    disorders including neurodevelopmental and psychiatric diseases. In this review
    we discuss the role of cell polarity at sequential stages during cortex development.
    We first provide an overview of morphological cell polarity features in cortical
    neural stem cells and newly-born postmitotic neurons. We then synthesize a conceptual
    molecular and biochemical framework how cell polarity is established at the cellular
    level through a break in symmetry in nascent cortical projection neurons. Lastly
    we provide a perspective how the molecular mechanisms applying to single cells
    could be probed and integrated in an in vivo and tissue-wide context.
article_number: '176'
article_processing_charge: Yes
author:
- first_name: Andi H
  full_name: Hansen, Andi H
  id: 38853E16-F248-11E8-B48F-1D18A9856A87
  last_name: Hansen
- first_name: Christian F
  full_name: Düllberg, Christian F
  id: 459064DC-F248-11E8-B48F-1D18A9856A87
  last_name: Düllberg
  orcid: 0000-0001-6335-9748
- first_name: Christine
  full_name: Mieck, Christine
  id: 34CAE85C-F248-11E8-B48F-1D18A9856A87
  last_name: Mieck
  orcid: 0000-0003-1919-7416
- first_name: Martin
  full_name: Loose, Martin
  id: 462D4284-F248-11E8-B48F-1D18A9856A87
  last_name: Loose
  orcid: 0000-0001-7309-9724
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
citation:
  ama: Hansen AH, Düllberg CF, Mieck C, Loose M, Hippenmeyer S. Cell polarity in cerebral
    cortex development - cellular architecture shaped by biochemical networks. <i>Frontiers
    in Cellular Neuroscience</i>. 2017;11. doi:<a href="https://doi.org/10.3389/fncel.2017.00176">10.3389/fncel.2017.00176</a>
  apa: Hansen, A. H., Düllberg, C. F., Mieck, C., Loose, M., &#38; Hippenmeyer, S.
    (2017). Cell polarity in cerebral cortex development - cellular architecture shaped
    by biochemical networks. <i>Frontiers in Cellular Neuroscience</i>. Frontiers
    Research Foundation. <a href="https://doi.org/10.3389/fncel.2017.00176">https://doi.org/10.3389/fncel.2017.00176</a>
  chicago: Hansen, Andi H, Christian F Düllberg, Christine Mieck, Martin Loose, and
    Simon Hippenmeyer. “Cell Polarity in Cerebral Cortex Development - Cellular Architecture
    Shaped by Biochemical Networks.” <i>Frontiers in Cellular Neuroscience</i>. Frontiers
    Research Foundation, 2017. <a href="https://doi.org/10.3389/fncel.2017.00176">https://doi.org/10.3389/fncel.2017.00176</a>.
  ieee: A. H. Hansen, C. F. Düllberg, C. Mieck, M. Loose, and S. Hippenmeyer, “Cell
    polarity in cerebral cortex development - cellular architecture shaped by biochemical
    networks,” <i>Frontiers in Cellular Neuroscience</i>, vol. 11. Frontiers Research
    Foundation, 2017.
  ista: Hansen AH, Düllberg CF, Mieck C, Loose M, Hippenmeyer S. 2017. Cell polarity
    in cerebral cortex development - cellular architecture shaped by biochemical networks.
    Frontiers in Cellular Neuroscience. 11, 176.
  mla: Hansen, Andi H., et al. “Cell Polarity in Cerebral Cortex Development - Cellular
    Architecture Shaped by Biochemical Networks.” <i>Frontiers in Cellular Neuroscience</i>,
    vol. 11, 176, Frontiers Research Foundation, 2017, doi:<a href="https://doi.org/10.3389/fncel.2017.00176">10.3389/fncel.2017.00176</a>.
  short: A.H. Hansen, C.F. Düllberg, C. Mieck, M. Loose, S. Hippenmeyer, Frontiers
    in Cellular Neuroscience 11 (2017).
date_created: 2018-12-11T11:49:25Z
date_published: 2017-06-28T00:00:00Z
date_updated: 2024-03-25T23:30:23Z
day: '28'
ddc:
- '570'
department:
- _id: SiHi
- _id: MaLo
doi: 10.3389/fncel.2017.00176
ec_funded: 1
external_id:
  isi:
  - '000404486700001'
file:
- access_level: open_access
  checksum: dc1f5a475b918d09a0f9f587400b1626
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:09:40Z
  date_updated: 2020-07-14T12:48:16Z
  file_id: '4764'
  file_name: IST-2017-830-v1+1_2017_Hansen_CellPolarity.pdf
  file_size: 2153858
  relation: main_file
file_date_updated: 2020-07-14T12:48:16Z
has_accepted_license: '1'
intvolume: '        11'
isi: 1
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
project:
- _id: 25D61E48-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '618444'
  name: Molecular Mechanisms of Cerebral Cortex Development
- _id: 25D7962E-B435-11E9-9278-68D0E5697425
  grant_number: RGP0053/2014
  name: Quantitative Structure-Function Analysis of Cerebral Cortex Assembly at Clonal
    Level
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
- _id: 25985A36-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: T00817-B21
  name: The biochemical basis of PAR polarization
publication: Frontiers in Cellular Neuroscience
publication_identifier:
  issn:
  - '16625102'
publication_status: published
publisher: Frontiers Research Foundation
publist_id: '6445'
pubrep_id: '830'
quality_controlled: '1'
related_material:
  record:
  - id: '9962'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Cell polarity in cerebral cortex development - cellular architecture shaped
  by biochemical networks
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 11
year: '2017'
...
---
_id: '1016'
abstract:
- lang: eng
  text: The integrity and dynamic properties of the microtubule cytoskeleton are indispensable
    for the development of the mammalian brain. Consequently, mutations in the genes
    that encode the structural component (the α/β-tubulin heterodimer) can give rise
    to severe, sporadic neurodevelopmental disorders. These are commonly referred
    to as the tubulinopathies. Here we report the addition of recessive quadrupedalism,
    also known as Uner Tan syndrome (UTS), to the growing list of diseases caused
    by tubulin variants. Analysis of a consanguineous UTS family identified a biallelic
    TUBB2B mutation, resulting in a p.R390Q amino acid substitution. In addition to
    the identifying quadrupedal locomotion, all three patients showed severe cerebellar
    hypoplasia. None, however, displayed the basal ganglia malformations typically
    associated with TUBB2B mutations. Functional analysis of the R390Q substitution
    revealed that it did not affect the ability of β-tubulin to fold or become assembled
    into the α/β-heterodimer, nor did it influence the incorporation of mutant-containing
    heterodimers into microtubule polymers. The 390Q mutation in S. cerevisiae TUB2
    did not affect growth under basal conditions, but did result in increased sensitivity
    to microtubule-depolymerizing drugs, indicative of a mild impact of this mutation
    on microtubule function. The TUBB2B mutation described here represents an unusual
    recessive mode of inheritance for missense-mediated tubulinopathies and reinforces
    the sensitivity of the developing cerebellum to microtubule defects.
article_processing_charge: No
author:
- first_name: Martin
  full_name: Breuss, Martin
  last_name: Breuss
- first_name: Thai
  full_name: Nguyen, Thai
  last_name: Nguyen
- first_name: Anjana
  full_name: Srivatsan, Anjana
  last_name: Srivatsan
- first_name: Ines
  full_name: Leca, Ines
  last_name: Leca
- first_name: Guoling
  full_name: Tian, Guoling
  last_name: Tian
- first_name: Tanja
  full_name: Fritz, Tanja
  last_name: Fritz
- first_name: Andi H
  full_name: Hansen, Andi H
  id: 38853E16-F248-11E8-B48F-1D18A9856A87
  last_name: Hansen
- first_name: Damir
  full_name: Musaev, Damir
  last_name: Musaev
- first_name: Jennifer
  full_name: Mcevoy Venneri, Jennifer
  last_name: Mcevoy Venneri
- first_name: James
  full_name: Kiely, James
  last_name: Kiely
- first_name: Rasim
  full_name: Rosti, Rasim
  last_name: Rosti
- first_name: Eric
  full_name: Scott, Eric
  last_name: Scott
- first_name: Uner
  full_name: Tan, Uner
  last_name: Tan
- first_name: Richard
  full_name: Kolodner, Richard
  last_name: Kolodner
- first_name: Nicholas
  full_name: Cowan, Nicholas
  last_name: Cowan
- first_name: David
  full_name: Keays, David
  last_name: Keays
- first_name: Joseph
  full_name: Gleeson, Joseph
  last_name: Gleeson
citation:
  ama: Breuss M, Nguyen T, Srivatsan A, et al. Uner Tan syndrome caused by a homozygous
    TUBB2B mutation affecting microtubule stability. <i>Human Molecular Genetics</i>.
    2017;26(2):258-269. doi:<a href="https://doi.org/10.1093/hmg/ddw383">10.1093/hmg/ddw383</a>
  apa: Breuss, M., Nguyen, T., Srivatsan, A., Leca, I., Tian, G., Fritz, T., … Gleeson,
    J. (2017). Uner Tan syndrome caused by a homozygous TUBB2B mutation affecting
    microtubule stability. <i>Human Molecular Genetics</i>. Oxford University Press.
    <a href="https://doi.org/10.1093/hmg/ddw383">https://doi.org/10.1093/hmg/ddw383</a>
  chicago: Breuss, Martin, Thai Nguyen, Anjana Srivatsan, Ines Leca, Guoling Tian,
    Tanja Fritz, Andi H Hansen, et al. “Uner Tan Syndrome Caused by a Homozygous TUBB2B
    Mutation Affecting Microtubule Stability.” <i>Human Molecular Genetics</i>. Oxford
    University Press, 2017. <a href="https://doi.org/10.1093/hmg/ddw383">https://doi.org/10.1093/hmg/ddw383</a>.
  ieee: M. Breuss <i>et al.</i>, “Uner Tan syndrome caused by a homozygous TUBB2B
    mutation affecting microtubule stability,” <i>Human Molecular Genetics</i>, vol.
    26, no. 2. Oxford University Press, pp. 258–269, 2017.
  ista: Breuss M, Nguyen T, Srivatsan A, Leca I, Tian G, Fritz T, Hansen AH, Musaev
    D, Mcevoy Venneri J, Kiely J, Rosti R, Scott E, Tan U, Kolodner R, Cowan N, Keays
    D, Gleeson J. 2017. Uner Tan syndrome caused by a homozygous TUBB2B mutation affecting
    microtubule stability. Human Molecular Genetics. 26(2), 258–269.
  mla: Breuss, Martin, et al. “Uner Tan Syndrome Caused by a Homozygous TUBB2B Mutation
    Affecting Microtubule Stability.” <i>Human Molecular Genetics</i>, vol. 26, no.
    2, Oxford University Press, 2017, pp. 258–69, doi:<a href="https://doi.org/10.1093/hmg/ddw383">10.1093/hmg/ddw383</a>.
  short: M. Breuss, T. Nguyen, A. Srivatsan, I. Leca, G. Tian, T. Fritz, A.H. Hansen,
    D. Musaev, J. Mcevoy Venneri, J. Kiely, R. Rosti, E. Scott, U. Tan, R. Kolodner,
    N. Cowan, D. Keays, J. Gleeson, Human Molecular Genetics 26 (2017) 258–269.
date_created: 2018-12-11T11:49:42Z
date_published: 2017-01-01T00:00:00Z
date_updated: 2023-09-22T09:42:42Z
day: '01'
department:
- _id: SiHi
doi: 10.1093/hmg/ddw383
external_id:
  isi:
  - '000397066400002'
intvolume: '        26'
isi: 1
issue: '2'
language:
- iso: eng
month: '01'
oa_version: None
page: 258 - 269
publication: Human Molecular Genetics
publication_identifier:
  issn:
  - '09646906'
publication_status: published
publisher: Oxford University Press
publist_id: '6379'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Uner Tan syndrome caused by a homozygous TUBB2B mutation affecting microtubule
  stability
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 26
year: '2017'
...
---
_id: '1017'
abstract:
- lang: eng
  text: The development of the vertebrate central nervous system is reliant on a complex
    cascade of biological processes that include mitotic division, relocation of migrating
    neurons, and the extension of dendritic and axonal processes. Each of these cellular
    events requires the diverse functional repertoire of the microtubule cytoskeleton
    for the generation of forces, assembly of macromolecular complexes and transport
    of molecules and organelles. The tubulins are a multi-gene family that encode
    for the constituents of microtubules, and have been implicated in a spectrum of
    neurological disorders. Evidence is building that different tubulins tune the
    functional properties of the microtubule cytoskeleton dependent on the cell type,
    developmental profile and subcellular localisation. Here we review of the origins
    of the functional specification of the tubulin gene family in the developing brain
    at a transcriptional, translational, and post-transcriptional level. We remind
    the reader that tubulins are not just loading controls for your average Western
    blot.
article_processing_charge: No
author:
- first_name: Martin
  full_name: Breuss, Martin
  last_name: Breuss
- first_name: Ines
  full_name: Leca, Ines
  last_name: Leca
- first_name: Thomas
  full_name: Gstrein, Thomas
  last_name: Gstrein
- first_name: Andi H
  full_name: Hansen, Andi H
  id: 38853E16-F248-11E8-B48F-1D18A9856A87
  last_name: Hansen
- first_name: David
  full_name: Keays, David
  last_name: Keays
citation:
  ama: 'Breuss M, Leca I, Gstrein T, Hansen AH, Keays D. Tubulins and brain development:
    The origins of functional specification. <i>Molecular and Cellular Neuroscience</i>.
    2017;84:58-67. doi:<a href="https://doi.org/10.1016/j.mcn.2017.03.002">10.1016/j.mcn.2017.03.002</a>'
  apa: 'Breuss, M., Leca, I., Gstrein, T., Hansen, A. H., &#38; Keays, D. (2017).
    Tubulins and brain development: The origins of functional specification. <i>Molecular
    and Cellular Neuroscience</i>. Academic Press. <a href="https://doi.org/10.1016/j.mcn.2017.03.002">https://doi.org/10.1016/j.mcn.2017.03.002</a>'
  chicago: 'Breuss, Martin, Ines Leca, Thomas Gstrein, Andi H Hansen, and David Keays.
    “Tubulins and Brain Development: The Origins of Functional Specification.” <i>Molecular
    and Cellular Neuroscience</i>. Academic Press, 2017. <a href="https://doi.org/10.1016/j.mcn.2017.03.002">https://doi.org/10.1016/j.mcn.2017.03.002</a>.'
  ieee: 'M. Breuss, I. Leca, T. Gstrein, A. H. Hansen, and D. Keays, “Tubulins and
    brain development: The origins of functional specification,” <i>Molecular and
    Cellular Neuroscience</i>, vol. 84. Academic Press, pp. 58–67, 2017.'
  ista: 'Breuss M, Leca I, Gstrein T, Hansen AH, Keays D. 2017. Tubulins and brain
    development: The origins of functional specification. Molecular and Cellular Neuroscience.
    84, 58–67.'
  mla: 'Breuss, Martin, et al. “Tubulins and Brain Development: The Origins of Functional
    Specification.” <i>Molecular and Cellular Neuroscience</i>, vol. 84, Academic
    Press, 2017, pp. 58–67, doi:<a href="https://doi.org/10.1016/j.mcn.2017.03.002">10.1016/j.mcn.2017.03.002</a>.'
  short: M. Breuss, I. Leca, T. Gstrein, A.H. Hansen, D. Keays, Molecular and Cellular
    Neuroscience 84 (2017) 58–67.
date_created: 2018-12-11T11:49:42Z
date_published: 2017-10-01T00:00:00Z
date_updated: 2023-09-22T09:42:15Z
day: '01'
ddc:
- '571'
department:
- _id: SiHi
doi: 10.1016/j.mcn.2017.03.002
external_id:
  isi:
  - '000415140700007'
file:
- access_level: open_access
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:09:19Z
  date_updated: 2018-12-12T10:09:19Z
  file_id: '4742'
  file_name: IST-2017-806-v1+2_1-s2.0-S1044743116302500-main_1_.pdf
  file_size: 1436377
  relation: main_file
file_date_updated: 2018-12-12T10:09:19Z
has_accepted_license: '1'
intvolume: '        84'
isi: 1
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
page: 58 - 67
publication: Molecular and Cellular Neuroscience
publication_identifier:
  issn:
  - '10447431'
publication_status: published
publisher: Academic Press
publist_id: '6377'
pubrep_id: '806'
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Tubulins and brain development: The origins of functional specification'
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 84
year: '2017'
...
---
_id: '9707'
abstract:
- lang: eng
  text: Branching morphogenesis of the epithelial ureteric bud forms the renal collecting
    duct system and is critical for normal nephron number, while low nephron number
    is implicated in hypertension and renal disease. Ureteric bud growth and branching
    requires GDNF signaling from the surrounding mesenchyme to cells at the ureteric
    bud tips, via the Ret receptor tyrosine kinase and coreceptor Gfrα1; Ret signaling
    up-regulates transcription factors Etv4 and Etv5, which are also critical for
    branching. Despite extensive knowledge of the genetic control of these events,
    it is not understood, at the cellular level, how renal branching morphogenesis
    is achieved or how Ret signaling influences epithelial cell behaviors to promote
    this process. Analysis of chimeric embryos previously suggested a role for Ret
    signaling in promoting cell rearrangements in the nephric duct, but this method
    was unsuited to study individual cell behaviors during ureteric bud branching.
    Here, we use Mosaic Analysis with Double Markers (MADM), combined with organ culture
    and time-lapse imaging, to trace the movements and divisions of individual ureteric
    bud tip cells. We first examine wild-type clones and then Ret or Etv4 mutant/wild-type
    clones in which the mutant and wild-type sister cells are differentially and heritably
    marked by green and red fluorescent proteins. We find that, in normal kidneys,
    most individual tip cells behave as self-renewing progenitors, some of whose progeny
    remain at the tips while others populate the growing UB trunks. In Ret or Etv4
    MADM clones, the wild-type cells generated at a UB tip are much more likely to
    remain at, or move to, the new tips during branching and elongation, while their
    Ret−/− or Etv4−/− sister cells tend to lag behind and contribute only to the trunks.
    By tracking successive mitoses in a cell lineage, we find that Ret signaling has
    little effect on proliferation, in contrast to its effects on cell movement. Our
    results show that Ret/Etv4 signaling promotes directed cell movements in the ureteric
    bud tips, and suggest a model in which these cell movements mediate branching
    morphogenesis.
article_processing_charge: No
author:
- first_name: Paul
  full_name: Riccio, Paul
  last_name: Riccio
- first_name: Christina
  full_name: Cebrián, Christina
  last_name: Cebrián
- first_name: Hui
  full_name: Zong, Hui
  last_name: Zong
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
- first_name: Frank
  full_name: Costantini, Frank
  last_name: Costantini
citation:
  ama: 'Riccio P, Cebrián C, Zong H, Hippenmeyer S, Costantini F. Data from: Ret and
    Etv4 promote directed movements of progenitor cells during renal branching morphogenesis.
    2017. doi:<a href="https://doi.org/10.5061/dryad.pk16b">10.5061/dryad.pk16b</a>'
  apa: 'Riccio, P., Cebrián, C., Zong, H., Hippenmeyer, S., &#38; Costantini, F. (2017).
    Data from: Ret and Etv4 promote directed movements of progenitor cells during
    renal branching morphogenesis. Dryad. <a href="https://doi.org/10.5061/dryad.pk16b">https://doi.org/10.5061/dryad.pk16b</a>'
  chicago: 'Riccio, Paul, Christina Cebrián, Hui Zong, Simon Hippenmeyer, and Frank
    Costantini. “Data from: Ret and Etv4 Promote Directed Movements of Progenitor
    Cells during Renal Branching Morphogenesis.” Dryad, 2017. <a href="https://doi.org/10.5061/dryad.pk16b">https://doi.org/10.5061/dryad.pk16b</a>.'
  ieee: 'P. Riccio, C. Cebrián, H. Zong, S. Hippenmeyer, and F. Costantini, “Data
    from: Ret and Etv4 promote directed movements of progenitor cells during renal
    branching morphogenesis.” Dryad, 2017.'
  ista: 'Riccio P, Cebrián C, Zong H, Hippenmeyer S, Costantini F. 2017. Data from:
    Ret and Etv4 promote directed movements of progenitor cells during renal branching
    morphogenesis, Dryad, <a href="https://doi.org/10.5061/dryad.pk16b">10.5061/dryad.pk16b</a>.'
  mla: 'Riccio, Paul, et al. <i>Data from: Ret and Etv4 Promote Directed Movements
    of Progenitor Cells during Renal Branching Morphogenesis</i>. Dryad, 2017, doi:<a
    href="https://doi.org/10.5061/dryad.pk16b">10.5061/dryad.pk16b</a>.'
  short: P. Riccio, C. Cebrián, H. Zong, S. Hippenmeyer, F. Costantini, (2017).
date_created: 2021-07-23T09:39:34Z
date_published: 2017-01-14T00:00:00Z
date_updated: 2022-08-25T13:34:55Z
day: '14'
department:
- _id: SiHi
doi: 10.5061/dryad.pk16b
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5061/dryad.pk16b
month: '01'
oa: 1
oa_version: Published Version
publisher: Dryad
related_material:
  record:
  - id: '9702'
    relation: used_in_publication
    status: deleted
status: public
title: 'Data from: Ret and Etv4 promote directed movements of progenitor cells during
  renal branching morphogenesis'
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2017'
...
---
_id: '1488'
abstract:
- lang: eng
  text: Branching morphogenesis of the epithelial ureteric bud forms the renal collecting
    duct system and is critical for normal nephron number, while low nephron number
    is implicated in hypertension and renal disease. Ureteric bud growth and branching
    requires GDNF signaling from the surrounding mesenchyme to cells at the ureteric
    bud tips, via the Ret receptor tyrosine kinase and coreceptor Gfrα1; Ret signaling
    up-regulates transcription factors Etv4 and Etv5, which are also critical for
    branching. Despite extensive knowledge of the genetic control of these events,
    it is not understood, at the cellular level, how renal branching morphogenesis
    is achieved or how Ret signaling influences epithelial cell behaviors to promote
    this process. Analysis of chimeric embryos previously suggested a role for Ret
    signaling in promoting cell rearrangements in the nephric duct, but this method
    was unsuited to study individual cell behaviors during ureteric bud branching.
    Here, we use Mosaic Analysis with Double Markers (MADM), combined with organ culture
    and time-lapse imaging, to trace the movements and divisions of individual ureteric
    bud tip cells. We first examine wild-type clones and then Ret or Etv4 mutant/wild-type
    clones in which the mutant and wild-type sister cells are differentially and heritably
    marked by green and red fluorescent proteins. We find that, in normal kidneys,
    most individual tip cells behave as self-renewing progenitors, some of whose progeny
    remain at the tips while others populate the growing UB trunks. In Ret or Etv4
    MADM clones, the wild-type cells generated at a UB tip are much more likely to
    remain at, or move to, the new tips during branching and elongation, while their
    Ret−/− or Etv4−/− sister cells tend to lag behind and contribute only to the trunks.
    By tracking successive mitoses in a cell lineage, we find that Ret signaling has
    little effect on proliferation, in contrast to its effects on cell movement. Our
    results show that Ret/Etv4 signaling promotes directed cell movements in the ureteric
    bud tips, and suggest a model in which these cell movements mediate branching
    morphogenesis.
acknowledgement: We thank Silvia Arber, Thomas Jessell, Kenneth M. Murphy, Carlton
  Bates, Hideki Enomoto, Liqun Luo and Andrew McMahon for mouse strains; Thomas Jessell
  for antibodies; and Laura Martinez Prat for experimental assistance.
article_number: e1002382
author:
- first_name: Paul
  full_name: Riccio, Paul
  last_name: Riccio
- first_name: Cristina
  full_name: Cebrián, Cristina
  last_name: Cebrián
- first_name: Hui
  full_name: Zong, Hui
  last_name: Zong
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
- first_name: Frank
  full_name: Costantini, Frank
  last_name: Costantini
citation:
  ama: Riccio P, Cebrián C, Zong H, Hippenmeyer S, Costantini F. Ret and Etv4 promote
    directed movements of progenitor cells during renal branching morphogenesis. <i>PLoS
    Biology</i>. 2016;14(2). doi:<a href="https://doi.org/10.1371/journal.pbio.1002382">10.1371/journal.pbio.1002382</a>
  apa: Riccio, P., Cebrián, C., Zong, H., Hippenmeyer, S., &#38; Costantini, F. (2016).
    Ret and Etv4 promote directed movements of progenitor cells during renal branching
    morphogenesis. <i>PLoS Biology</i>. Public Library of Science. <a href="https://doi.org/10.1371/journal.pbio.1002382">https://doi.org/10.1371/journal.pbio.1002382</a>
  chicago: Riccio, Paul, Cristina Cebrián, Hui Zong, Simon Hippenmeyer, and Frank
    Costantini. “Ret and Etv4 Promote Directed Movements of Progenitor Cells during
    Renal Branching Morphogenesis.” <i>PLoS Biology</i>. Public Library of Science,
    2016. <a href="https://doi.org/10.1371/journal.pbio.1002382">https://doi.org/10.1371/journal.pbio.1002382</a>.
  ieee: P. Riccio, C. Cebrián, H. Zong, S. Hippenmeyer, and F. Costantini, “Ret and
    Etv4 promote directed movements of progenitor cells during renal branching morphogenesis,”
    <i>PLoS Biology</i>, vol. 14, no. 2. Public Library of Science, 2016.
  ista: Riccio P, Cebrián C, Zong H, Hippenmeyer S, Costantini F. 2016. Ret and Etv4
    promote directed movements of progenitor cells during renal branching morphogenesis.
    PLoS Biology. 14(2), e1002382.
  mla: Riccio, Paul, et al. “Ret and Etv4 Promote Directed Movements of Progenitor
    Cells during Renal Branching Morphogenesis.” <i>PLoS Biology</i>, vol. 14, no.
    2, e1002382, Public Library of Science, 2016, doi:<a href="https://doi.org/10.1371/journal.pbio.1002382">10.1371/journal.pbio.1002382</a>.
  short: P. Riccio, C. Cebrián, H. Zong, S. Hippenmeyer, F. Costantini, PLoS Biology
    14 (2016).
date_created: 2018-12-11T11:52:19Z
date_published: 2016-02-19T00:00:00Z
date_updated: 2023-02-23T10:01:08Z
day: '19'
ddc:
- '570'
department:
- _id: SiHi
doi: 10.1371/journal.pbio.1002382
file:
- access_level: open_access
  checksum: 7f8fa1b3a29f94c0a14dd4465278cdbc
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:13:42Z
  date_updated: 2020-07-14T12:44:57Z
  file_id: '5027'
  file_name: IST-2016-517-v1+1_journal.pbio.1002382_1_.PDF
  file_size: 5904773
  relation: main_file
file_date_updated: 2020-07-14T12:44:57Z
has_accepted_license: '1'
intvolume: '        14'
issue: '2'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
publication: PLoS Biology
publication_status: published
publisher: Public Library of Science
publist_id: '5699'
pubrep_id: '517'
quality_controlled: '1'
related_material:
  record:
  - id: '9703'
    relation: research_data
    status: deleted
scopus_import: 1
status: public
title: Ret and Etv4 promote directed movements of progenitor cells during renal branching
  morphogenesis
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 14
year: '2016'
...
---
_id: '1181'
abstract:
- lang: eng
  text: 'This review accompanies a 2016 SFN mini-symposium presenting examples of
    current studies that address a central question: How do neural stem cells (NSCs)
    divide in different ways to produce heterogeneous daughter types at the right
    time and in proper numbers to build a cerebral cortex with the appropriate size
    and structure? We will focus on four aspects of corticogenesis: cytokinesis events
    that follow apical mitoses of NSCs; coordinating abscission with delamination
    from the apical membrane; timing of neurogenesis and its indirect regulation through
    emergence of intermediate progenitors; and capacity of single NSCs to generate
    the correct number and laminar fate of cortical neurons. Defects in these mechanisms
    can cause microcephaly and other brain malformations, and understanding them is
    critical to designing diagnostic tools and preventive and corrective therapies.'
acknowledgement: This work was supported by National Institutes of Health Grants R01NS089795
  and R01NS098370 to H.T.G., R01NS076640 to N.D.D., and R01MH094589 and R01NS089777
  to B.C., Academia Sinica AS-104-TPB09-2 to S.-J.C, European Union FP7-CIG618444
  and Human Frontiers Science Program RGP0053 to S.H., and Fonds Léon Fredericq, from
  the Fondation Médicale Reine Elisabeth, and from the Fonation Simone et Pierre Clerdent
  to L.N. The authors apologize to colleagues whose work could not be cited due to
  space limitations.
author:
- first_name: Noelle
  full_name: Dwyer, Noelle
  last_name: Dwyer
- first_name: Bin
  full_name: Chen, Bin
  last_name: Chen
- first_name: Shen
  full_name: Chou, Shen
  last_name: Chou
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
- first_name: Laurent
  full_name: Nguyen, Laurent
  last_name: Nguyen
- first_name: Troy
  full_name: Ghashghaei, Troy
  last_name: Ghashghaei
citation:
  ama: 'Dwyer N, Chen B, Chou S, Hippenmeyer S, Nguyen L, Ghashghaei T. Neural stem
    cells to cerebral cortex: Emerging mechanisms regulating progenitor behavior and
    productivity. <i>Journal of Neuroscience</i>. 2016;36(45):11394-11401. doi:<a
    href="https://doi.org/10.1523/JNEUROSCI.2359-16.2016">10.1523/JNEUROSCI.2359-16.2016</a>'
  apa: 'Dwyer, N., Chen, B., Chou, S., Hippenmeyer, S., Nguyen, L., &#38; Ghashghaei,
    T. (2016). Neural stem cells to cerebral cortex: Emerging mechanisms regulating
    progenitor behavior and productivity. <i>Journal of Neuroscience</i>. Society
    for Neuroscience. <a href="https://doi.org/10.1523/JNEUROSCI.2359-16.2016">https://doi.org/10.1523/JNEUROSCI.2359-16.2016</a>'
  chicago: 'Dwyer, Noelle, Bin Chen, Shen Chou, Simon Hippenmeyer, Laurent Nguyen,
    and Troy Ghashghaei. “Neural Stem Cells to Cerebral Cortex: Emerging Mechanisms
    Regulating Progenitor Behavior and Productivity.” <i>Journal of Neuroscience</i>.
    Society for Neuroscience, 2016. <a href="https://doi.org/10.1523/JNEUROSCI.2359-16.2016">https://doi.org/10.1523/JNEUROSCI.2359-16.2016</a>.'
  ieee: 'N. Dwyer, B. Chen, S. Chou, S. Hippenmeyer, L. Nguyen, and T. Ghashghaei,
    “Neural stem cells to cerebral cortex: Emerging mechanisms regulating progenitor
    behavior and productivity,” <i>Journal of Neuroscience</i>, vol. 36, no. 45. Society
    for Neuroscience, pp. 11394–11401, 2016.'
  ista: 'Dwyer N, Chen B, Chou S, Hippenmeyer S, Nguyen L, Ghashghaei T. 2016. Neural
    stem cells to cerebral cortex: Emerging mechanisms regulating progenitor behavior
    and productivity. Journal of Neuroscience. 36(45), 11394–11401.'
  mla: 'Dwyer, Noelle, et al. “Neural Stem Cells to Cerebral Cortex: Emerging Mechanisms
    Regulating Progenitor Behavior and Productivity.” <i>Journal of Neuroscience</i>,
    vol. 36, no. 45, Society for Neuroscience, 2016, pp. 11394–401, doi:<a href="https://doi.org/10.1523/JNEUROSCI.2359-16.2016">10.1523/JNEUROSCI.2359-16.2016</a>.'
  short: N. Dwyer, B. Chen, S. Chou, S. Hippenmeyer, L. Nguyen, T. Ghashghaei, Journal
    of Neuroscience 36 (2016) 11394–11401.
date_created: 2018-12-11T11:50:35Z
date_published: 2016-11-09T00:00:00Z
date_updated: 2021-01-12T06:48:54Z
day: '09'
department:
- _id: SiHi
doi: 10.1523/JNEUROSCI.2359-16.2016
intvolume: '        36'
issue: '45'
language:
- iso: eng
month: '11'
oa_version: None
page: 11394 - 11401
project:
- _id: 25D7962E-B435-11E9-9278-68D0E5697425
  grant_number: RGP0053/2014
  name: Quantitative Structure-Function Analysis of Cerebral Cortex Assembly at Clonal
    Level
publication: Journal of Neuroscience
publication_status: published
publisher: Society for Neuroscience
publist_id: '6172'
quality_controlled: '1'
scopus_import: 1
status: public
title: 'Neural stem cells to cerebral cortex: Emerging mechanisms regulating progenitor
  behavior and productivity'
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 36
year: '2016'
...
---
_id: '1550'
abstract:
- lang: eng
  text: The medial ganglionic eminence (MGE) gives rise to the majority of mouse forebrain
    interneurons. Here, we examine the lineage relationship among MGE-derived interneurons
    using a replication-defective retroviral library containing a highly diverse set
    of DNA barcodes. Recovering the barcodes from the mature progeny of infected progenitor
    cells enabled us to unambiguously determine their respective lineal relationship.
    We found that clonal dispersion occurs across large areas of the brain and is
    not restricted by anatomical divisions. As such, sibling interneurons can populate
    the cortex, hippocampus striatum, and globus pallidus. The majority of interneurons
    appeared to be generated from asymmetric divisions of MGE progenitor cells, followed
    by symmetric divisions within the subventricular zone. Altogether, our findings
    uncover that lineage relationships do not appear to determine interneuron allocation
    to particular regions. As such, it is likely that clonally related interneurons
    have considerable flexibility as to the particular forebrain circuits to which
    they can contribute.
acknowledgement: "Research in the G.F. laboratory is supported by NIH (NS 081297,
  MH095147, and P01NS074972) and the Simons Foundation. Research in the S.H. laboratory
  is supported by the European Union (FP7-CIG618444). C.M. is supported by EMBO ALTF
  (1295-2012). X.H.J. is supported by EMBO (ALTF 303-2010) and HFSP (LT000078/2011-L).\r\n\r\n"
author:
- first_name: Christian
  full_name: Mayer, Christian
  last_name: Mayer
- first_name: Xavier
  full_name: Jaglin, Xavier
  last_name: Jaglin
- first_name: Lucy
  full_name: Cobbs, Lucy
  last_name: Cobbs
- first_name: Rachel
  full_name: Bandler, Rachel
  last_name: Bandler
- first_name: Carmen
  full_name: Streicher, Carmen
  id: 36BCB99C-F248-11E8-B48F-1D18A9856A87
  last_name: Streicher
- first_name: Constance
  full_name: Cepko, Constance
  last_name: Cepko
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
- first_name: Gord
  full_name: Fishell, Gord
  last_name: Fishell
citation:
  ama: Mayer C, Jaglin X, Cobbs L, et al. Clonally related forebrain interneurons
    disperse broadly across both functional areas and structural boundaries. <i>Neuron</i>.
    2015;87(5):989-998. doi:<a href="https://doi.org/10.1016/j.neuron.2015.07.011">10.1016/j.neuron.2015.07.011</a>
  apa: Mayer, C., Jaglin, X., Cobbs, L., Bandler, R., Streicher, C., Cepko, C., …
    Fishell, G. (2015). Clonally related forebrain interneurons disperse broadly across
    both functional areas and structural boundaries. <i>Neuron</i>. Elsevier. <a href="https://doi.org/10.1016/j.neuron.2015.07.011">https://doi.org/10.1016/j.neuron.2015.07.011</a>
  chicago: Mayer, Christian, Xavier Jaglin, Lucy Cobbs, Rachel Bandler, Carmen Streicher,
    Constance Cepko, Simon Hippenmeyer, and Gord Fishell. “Clonally Related Forebrain
    Interneurons Disperse Broadly across Both Functional Areas and Structural Boundaries.”
    <i>Neuron</i>. Elsevier, 2015. <a href="https://doi.org/10.1016/j.neuron.2015.07.011">https://doi.org/10.1016/j.neuron.2015.07.011</a>.
  ieee: C. Mayer <i>et al.</i>, “Clonally related forebrain interneurons disperse
    broadly across both functional areas and structural boundaries,” <i>Neuron</i>,
    vol. 87, no. 5. Elsevier, pp. 989–998, 2015.
  ista: Mayer C, Jaglin X, Cobbs L, Bandler R, Streicher C, Cepko C, Hippenmeyer S,
    Fishell G. 2015. Clonally related forebrain interneurons disperse broadly across
    both functional areas and structural boundaries. Neuron. 87(5), 989–998.
  mla: Mayer, Christian, et al. “Clonally Related Forebrain Interneurons Disperse
    Broadly across Both Functional Areas and Structural Boundaries.” <i>Neuron</i>,
    vol. 87, no. 5, Elsevier, 2015, pp. 989–98, doi:<a href="https://doi.org/10.1016/j.neuron.2015.07.011">10.1016/j.neuron.2015.07.011</a>.
  short: C. Mayer, X. Jaglin, L. Cobbs, R. Bandler, C. Streicher, C. Cepko, S. Hippenmeyer,
    G. Fishell, Neuron 87 (2015) 989–998.
date_created: 2018-12-11T11:52:40Z
date_published: 2015-09-02T00:00:00Z
date_updated: 2021-01-12T06:51:32Z
day: '02'
department:
- _id: SiHi
doi: 10.1016/j.neuron.2015.07.011
external_id:
  pmid:
  - '26299473'
intvolume: '        87'
issue: '5'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4560602/
month: '09'
oa: 1
oa_version: Submitted Version
page: 989 - 998
pmid: 1
publication: Neuron
publication_status: published
publisher: Elsevier
publist_id: '5621'
quality_controlled: '1'
scopus_import: 1
status: public
title: Clonally related forebrain interneurons disperse broadly across both functional
  areas and structural boundaries
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 87
year: '2015'
...
---
_id: '1899'
abstract:
- lang: eng
  text: Asymmetric cell divisions allow stem cells to balance proliferation and differentiation.
    During embryogenesis, murine epidermis expands rapidly from a single layer of
    unspecified basal layer progenitors to a stratified, differentiated epithelium.
    Morphogenesis involves perpendicular (asymmetric) divisions and the spindle orientation
    protein LGN, but little is known about how the apical localization of LGN is regulated.
    Here, we combine conventional genetics and lentiviral-mediated in vivo RNAi to
    explore the functions of the LGN-interacting proteins Par3, mInsc and Gα i3. Whereas
    loss of each gene alone leads to randomized division angles, combined loss of
    Gnai3 and mInsc causes a phenotype of mostly planar divisions, akin to loss of
    LGN. These findings lend experimental support for the hitherto untested model
    that Par3-mInsc and Gα i3 act cooperatively to polarize LGN and promote perpendicular
    divisions. Finally, we uncover a developmental switch between delamination-driven
    early stratification and spindle-orientation-dependent differentiation that occurs
    around E15, revealing a two-step mechanism underlying epidermal maturation.
article_processing_charge: No
article_type: original
author:
- first_name: Scott
  full_name: Williams, Scott
  last_name: Williams
- first_name: Lyndsay
  full_name: Ratliff, Lyndsay
  last_name: Ratliff
- first_name: Maria P
  full_name: Postiglione, Maria P
  id: 2C67902A-F248-11E8-B48F-1D18A9856A87
  last_name: Postiglione
- first_name: Juergen
  full_name: Knoblich, Juergen
  last_name: Knoblich
- first_name: Elaine
  full_name: Fuchs, Elaine
  last_name: Fuchs
citation:
  ama: Williams S, Ratliff L, Postiglione MP, Knoblich J, Fuchs E. Par3-mInsc and
    Gα i3 cooperate to promote oriented epidermal cell divisions through LGN. <i>Nature
    Cell Biology</i>. 2014;16(8):758-769. doi:<a href="https://doi.org/10.1038/ncb3001">10.1038/ncb3001</a>
  apa: Williams, S., Ratliff, L., Postiglione, M. P., Knoblich, J., &#38; Fuchs, E.
    (2014). Par3-mInsc and Gα i3 cooperate to promote oriented epidermal cell divisions
    through LGN. <i>Nature Cell Biology</i>. Nature Publishing Group. <a href="https://doi.org/10.1038/ncb3001">https://doi.org/10.1038/ncb3001</a>
  chicago: Williams, Scott, Lyndsay Ratliff, Maria P Postiglione, Juergen Knoblich,
    and Elaine Fuchs. “Par3-MInsc and Gα I3 Cooperate to Promote Oriented Epidermal
    Cell Divisions through LGN.” <i>Nature Cell Biology</i>. Nature Publishing Group,
    2014. <a href="https://doi.org/10.1038/ncb3001">https://doi.org/10.1038/ncb3001</a>.
  ieee: S. Williams, L. Ratliff, M. P. Postiglione, J. Knoblich, and E. Fuchs, “Par3-mInsc
    and Gα i3 cooperate to promote oriented epidermal cell divisions through LGN,”
    <i>Nature Cell Biology</i>, vol. 16, no. 8. Nature Publishing Group, pp. 758–769,
    2014.
  ista: Williams S, Ratliff L, Postiglione MP, Knoblich J, Fuchs E. 2014. Par3-mInsc
    and Gα i3 cooperate to promote oriented epidermal cell divisions through LGN.
    Nature Cell Biology. 16(8), 758–769.
  mla: Williams, Scott, et al. “Par3-MInsc and Gα I3 Cooperate to Promote Oriented
    Epidermal Cell Divisions through LGN.” <i>Nature Cell Biology</i>, vol. 16, no.
    8, Nature Publishing Group, 2014, pp. 758–69, doi:<a href="https://doi.org/10.1038/ncb3001">10.1038/ncb3001</a>.
  short: S. Williams, L. Ratliff, M.P. Postiglione, J. Knoblich, E. Fuchs, Nature
    Cell Biology 16 (2014) 758–769.
date_created: 2018-12-11T11:54:36Z
date_published: 2014-07-13T00:00:00Z
date_updated: 2021-01-12T06:53:55Z
day: '13'
department:
- _id: SiHi
doi: 10.1038/ncb3001
external_id:
  pmid:
  - '25016959'
intvolume: '        16'
issue: '8'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4159251/
month: '07'
oa: 1
oa_version: Submitted Version
page: 758 - 769
pmid: 1
publication: Nature Cell Biology
publication_status: published
publisher: Nature Publishing Group
publist_id: '5196'
quality_controlled: '1'
scopus_import: 1
status: public
title: Par3-mInsc and Gα i3 cooperate to promote oriented epidermal cell divisions
  through LGN
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 16
year: '2014'
...
---
_id: '2020'
abstract:
- lang: eng
  text: The mammalian heart has long been considered a postmitotic organ, implying
    that the total number of cardiomyocytes is set at birth. Analysis of cell division
    in the mammalian heart is complicated by cardiomyocyte binucleation shortly after
    birth, which makes it challenging to interpret traditional assays of cell turnover
    [Laflamme MA, Murray CE (2011) Nature 473(7347):326–335; Bergmann O, et al. (2009)
    Science 324(5923):98–102]. An elegant multi-isotope imaging-mass spectrometry
    technique recently calculated the low, discrete rate of cardiomyocyte generation
    in mice [Senyo SE, et al. (2013) Nature 493(7432):433–436], yet our cellular-level
    understanding of postnatal cardiomyogenesis remains limited. Herein, we provide
    a new line of evidence for the differentiated α-myosin heavy chain-expressing
    cardiomyocyte as the cell of origin of postnatal cardiomyogenesis using the “mosaic
    analysis with double markers” mouse model. We show limited, life-long, symmetric
    division of cardiomyocytes as a rare event that is evident in utero but significantly
    diminishes after the first month of life in mice; daughter cardiomyocytes divide
    very seldom, which this study is the first to demonstrate, to our knowledge. Furthermore,
    ligation of the left anterior descending coronary artery, which causes a myocardial
    infarction in the mosaic analysis with double-marker mice, did not increase the
    rate of cardiomyocyte division above the basal level for up to 4 wk after the
    injury. The clonal analysis described here provides direct evidence of postnatal
    mammalian cardiomyogenesis.
author:
- first_name: Shah
  full_name: Ali, Shah
  last_name: Ali
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
- first_name: Lily
  full_name: Saadat, Lily
  last_name: Saadat
- first_name: Liqun
  full_name: Luo, Liqun
  last_name: Luo
- first_name: Irving
  full_name: Weissman, Irving
  last_name: Weissman
- first_name: Reza
  full_name: Ardehali, Reza
  last_name: Ardehali
citation:
  ama: Ali S, Hippenmeyer S, Saadat L, Luo L, Weissman I, Ardehali R. Existing cardiomyocytes
    generate cardiomyocytes at a low rate after birth in mice. <i>PNAS</i>. 2014;111(24):8850-8855.
    doi:<a href="https://doi.org/10.1073/pnas.1408233111">10.1073/pnas.1408233111</a>
  apa: Ali, S., Hippenmeyer, S., Saadat, L., Luo, L., Weissman, I., &#38; Ardehali,
    R. (2014). Existing cardiomyocytes generate cardiomyocytes at a low rate after
    birth in mice. <i>PNAS</i>. National Academy of Sciences. <a href="https://doi.org/10.1073/pnas.1408233111">https://doi.org/10.1073/pnas.1408233111</a>
  chicago: Ali, Shah, Simon Hippenmeyer, Lily Saadat, Liqun Luo, Irving Weissman,
    and Reza Ardehali. “Existing Cardiomyocytes Generate Cardiomyocytes at a Low Rate
    after Birth in Mice.” <i>PNAS</i>. National Academy of Sciences, 2014. <a href="https://doi.org/10.1073/pnas.1408233111">https://doi.org/10.1073/pnas.1408233111</a>.
  ieee: S. Ali, S. Hippenmeyer, L. Saadat, L. Luo, I. Weissman, and R. Ardehali, “Existing
    cardiomyocytes generate cardiomyocytes at a low rate after birth in mice,” <i>PNAS</i>,
    vol. 111, no. 24. National Academy of Sciences, pp. 8850–8855, 2014.
  ista: Ali S, Hippenmeyer S, Saadat L, Luo L, Weissman I, Ardehali R. 2014. Existing
    cardiomyocytes generate cardiomyocytes at a low rate after birth in mice. PNAS.
    111(24), 8850–8855.
  mla: Ali, Shah, et al. “Existing Cardiomyocytes Generate Cardiomyocytes at a Low
    Rate after Birth in Mice.” <i>PNAS</i>, vol. 111, no. 24, National Academy of
    Sciences, 2014, pp. 8850–55, doi:<a href="https://doi.org/10.1073/pnas.1408233111">10.1073/pnas.1408233111</a>.
  short: S. Ali, S. Hippenmeyer, L. Saadat, L. Luo, I. Weissman, R. Ardehali, PNAS
    111 (2014) 8850–8855.
date_created: 2018-12-11T11:55:15Z
date_published: 2014-06-17T00:00:00Z
date_updated: 2021-01-12T06:54:46Z
day: '17'
department:
- _id: SiHi
doi: 10.1073/pnas.1408233111
intvolume: '       111'
issue: '24'
language:
- iso: eng
month: '06'
oa_version: None
page: 8850 - 8855
publication: PNAS
publication_status: published
publisher: National Academy of Sciences
publist_id: '5052'
quality_controlled: '1'
scopus_import: 1
status: public
title: Existing cardiomyocytes generate cardiomyocytes at a low rate after birth in
  mice
type: journal_article
user_id: 4435EBFC-F248-11E8-B48F-1D18A9856A87
volume: 111
year: '2014'
...
---
_id: '2021'
abstract:
- lang: eng
  text: Neurotrophins regulate diverse aspects of neuronal development and plasticity,
    but their precise in vivo functions during neural circuit assembly in the central
    brain remain unclear. We show that the neurotrophin receptor tropomyosin-related
    kinase C (TrkC) is required for dendritic growth and branching of mouse cerebellar
    Purkinje cells. Sparse TrkC knockout reduced dendrite complexity, but global Purkinje
    cell knockout had no effect. Removal of the TrkC ligand neurotrophin-3 (NT-3)
    from cerebellar granule cells, which provide major afferent input to developing
    Purkinje cell dendrites, rescued the dendrite defects caused by sparse TrkC disruption
    in Purkinje cells. Our data demonstrate that NT-3 from presynaptic neurons (granule
    cells) is required for TrkC-dependent competitive dendrite morphogenesis in postsynaptic
    neurons (Purkinje cells)—a previously unknown mechanism of neural circuit development.
author:
- first_name: Joo
  full_name: William, Joo
  last_name: William
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
- first_name: Liqun
  full_name: Luo, Liqun
  last_name: Luo
citation:
  ama: William J, Hippenmeyer S, Luo L. Dendrite morphogenesis depends on relative
    levels of NT-3/TrkC signaling. <i>Science</i>. 2014;346(6209):626-629. doi:<a
    href="https://doi.org/10.1126/science.1258996">10.1126/science.1258996</a>
  apa: William, J., Hippenmeyer, S., &#38; Luo, L. (2014). Dendrite morphogenesis
    depends on relative levels of NT-3/TrkC signaling. <i>Science</i>. American Association
    for the Advancement of Science. <a href="https://doi.org/10.1126/science.1258996">https://doi.org/10.1126/science.1258996</a>
  chicago: William, Joo, Simon Hippenmeyer, and Liqun Luo. “Dendrite Morphogenesis
    Depends on Relative Levels of NT-3/TrkC Signaling.” <i>Science</i>. American Association
    for the Advancement of Science, 2014. <a href="https://doi.org/10.1126/science.1258996">https://doi.org/10.1126/science.1258996</a>.
  ieee: J. William, S. Hippenmeyer, and L. Luo, “Dendrite morphogenesis depends on
    relative levels of NT-3/TrkC signaling,” <i>Science</i>, vol. 346, no. 6209. American
    Association for the Advancement of Science, pp. 626–629, 2014.
  ista: William J, Hippenmeyer S, Luo L. 2014. Dendrite morphogenesis depends on relative
    levels of NT-3/TrkC signaling. Science. 346(6209), 626–629.
  mla: William, Joo, et al. “Dendrite Morphogenesis Depends on Relative Levels of
    NT-3/TrkC Signaling.” <i>Science</i>, vol. 346, no. 6209, American Association
    for the Advancement of Science, 2014, pp. 626–29, doi:<a href="https://doi.org/10.1126/science.1258996">10.1126/science.1258996</a>.
  short: J. William, S. Hippenmeyer, L. Luo, Science 346 (2014) 626–629.
date_created: 2018-12-11T11:55:15Z
date_published: 2014-10-31T00:00:00Z
date_updated: 2021-01-12T06:54:47Z
day: '31'
department:
- _id: SiHi
doi: 10.1126/science.1258996
intvolume: '       346'
issue: '6209'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4631524/
month: '10'
oa: 1
oa_version: Submitted Version
page: 626 - 629
publication: Science
publication_status: published
publisher: American Association for the Advancement of Science
publist_id: '5051'
quality_controlled: '1'
scopus_import: 1
status: public
title: Dendrite morphogenesis depends on relative levels of NT-3/TrkC signaling
type: journal_article
user_id: 4435EBFC-F248-11E8-B48F-1D18A9856A87
volume: 346
year: '2014'
...
---
_id: '2022'
abstract:
- lang: eng
  text: Radial glial progenitors (RGPs) are responsible for producing nearly all neocortical
    neurons. To gain insight into the patterns of RGP division and neuron production,
    we quantitatively analyzed excitatory neuron genesis in the mouse neocortex using
    Mosaic Analysis with Double Markers, which provides single-cell resolution of
    progenitor division patterns and potential in vivo. We found that RGPs progress
    through a coherent program in which their proliferative potential diminishes in
    a predictable manner. Upon entry into the neurogenic phase, individual RGPs produce
    ∼8–9 neurons distributed in both deep and superficial layers, indicating a unitary
    output in neuronal production. Removal of OTX1, a transcription factor transiently
    expressed in RGPs, results in both deep- and superficial-layer neuron loss and
    a reduction in neuronal unit size. Moreover, ∼1/6 of neurogenic RGPs proceed to
    produce glia. These results suggest that progenitor behavior and histogenesis
    in the mammalian neocortex conform to a remarkably orderly and deterministic program.
author:
- first_name: Peng
  full_name: Gao, Peng
  last_name: Gao
- first_name: Maria P
  full_name: Postiglione, Maria P
  id: 2C67902A-F248-11E8-B48F-1D18A9856A87
  last_name: Postiglione
- first_name: Teresa
  full_name: Krieger, Teresa
  last_name: Krieger
- first_name: Luisirene
  full_name: Hernandez, Luisirene
  last_name: Hernandez
- first_name: Chao
  full_name: Wang, Chao
  last_name: Wang
- first_name: Zhi
  full_name: Han, Zhi
  last_name: Han
- first_name: Carmen
  full_name: Streicher, Carmen
  id: 36BCB99C-F248-11E8-B48F-1D18A9856A87
  last_name: Streicher
- first_name: Ekaterina
  full_name: Papusheva, Ekaterina
  id: 41DB591E-F248-11E8-B48F-1D18A9856A87
  last_name: Papusheva
- first_name: Ryan
  full_name: Insolera, Ryan
  last_name: Insolera
- first_name: Kritika
  full_name: Chugh, Kritika
  last_name: Chugh
- first_name: Oren
  full_name: Kodish, Oren
  last_name: Kodish
- first_name: Kun
  full_name: Huang, Kun
  last_name: Huang
- first_name: Benjamin
  full_name: Simons, Benjamin
  last_name: Simons
- first_name: Liqun
  full_name: Luo, Liqun
  last_name: Luo
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
- first_name: Song
  full_name: Shi, Song
  last_name: Shi
citation:
  ama: Gao P, Postiglione MP, Krieger T, et al. Deterministic progenitor behavior
    and unitary production of neurons in the neocortex. <i>Cell</i>. 2014;159(4):775-788.
    doi:<a href="https://doi.org/10.1016/j.cell.2014.10.027">10.1016/j.cell.2014.10.027</a>
  apa: Gao, P., Postiglione, M. P., Krieger, T., Hernandez, L., Wang, C., Han, Z.,
    … Shi, S. (2014). Deterministic progenitor behavior and unitary production of
    neurons in the neocortex. <i>Cell</i>. Cell Press. <a href="https://doi.org/10.1016/j.cell.2014.10.027">https://doi.org/10.1016/j.cell.2014.10.027</a>
  chicago: Gao, Peng, Maria P Postiglione, Teresa Krieger, Luisirene Hernandez, Chao
    Wang, Zhi Han, Carmen Streicher, et al. “Deterministic Progenitor Behavior and
    Unitary Production of Neurons in the Neocortex.” <i>Cell</i>. Cell Press, 2014.
    <a href="https://doi.org/10.1016/j.cell.2014.10.027">https://doi.org/10.1016/j.cell.2014.10.027</a>.
  ieee: P. Gao <i>et al.</i>, “Deterministic progenitor behavior and unitary production
    of neurons in the neocortex,” <i>Cell</i>, vol. 159, no. 4. Cell Press, pp. 775–788,
    2014.
  ista: Gao P, Postiglione MP, Krieger T, Hernandez L, Wang C, Han Z, Streicher C,
    Papusheva E, Insolera R, Chugh K, Kodish O, Huang K, Simons B, Luo L, Hippenmeyer
    S, Shi S. 2014. Deterministic progenitor behavior and unitary production of neurons
    in the neocortex. Cell. 159(4), 775–788.
  mla: Gao, Peng, et al. “Deterministic Progenitor Behavior and Unitary Production
    of Neurons in the Neocortex.” <i>Cell</i>, vol. 159, no. 4, Cell Press, 2014,
    pp. 775–88, doi:<a href="https://doi.org/10.1016/j.cell.2014.10.027">10.1016/j.cell.2014.10.027</a>.
  short: P. Gao, M.P. Postiglione, T. Krieger, L. Hernandez, C. Wang, Z. Han, C. Streicher,
    E. Papusheva, R. Insolera, K. Chugh, O. Kodish, K. Huang, B. Simons, L. Luo, S.
    Hippenmeyer, S. Shi, Cell 159 (2014) 775–788.
date_created: 2018-12-11T11:55:16Z
date_published: 2014-11-06T00:00:00Z
date_updated: 2021-01-12T06:54:47Z
day: '06'
ddc:
- '570'
department:
- _id: SiHi
- _id: Bio
doi: 10.1016/j.cell.2014.10.027
ec_funded: 1
file:
- access_level: open_access
  checksum: 6c5de8329bb2ffa71cba9fda750f14ce
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:08:47Z
  date_updated: 2020-07-14T12:45:25Z
  file_id: '4709'
  file_name: IST-2016-423-v1+1_1-s2.0-S0092867414013154-main.pdf
  file_size: 4435787
  relation: main_file
file_date_updated: 2020-07-14T12:45:25Z
has_accepted_license: '1'
intvolume: '       159'
issue: '4'
language:
- iso: eng
month: '11'
oa: 1
oa_version: Published Version
page: 775 - 788
project:
- _id: 25D61E48-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '618444'
  name: Molecular Mechanisms of Cerebral Cortex Development
- _id: 25D7962E-B435-11E9-9278-68D0E5697425
  grant_number: RGP0053/2014
  name: Quantitative Structure-Function Analysis of Cerebral Cortex Assembly at Clonal
    Level
publication: Cell
publication_status: published
publisher: Cell Press
publist_id: '5050'
pubrep_id: '423'
quality_controlled: '1'
scopus_import: 1
status: public
title: Deterministic progenitor behavior and unitary production of neurons in the
  neocortex
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4435EBFC-F248-11E8-B48F-1D18A9856A87
volume: 159
year: '2014'
...
---
_id: '2175'
abstract:
- lang: eng
  text: The cerebral cortex, the seat of our cognitive abilities, is composed of an
    intricate network of billions of excitatory projection and inhibitory interneurons.
    Postmitotic cortical neurons are generated by a diverse set of neural stem cell
    progenitors within dedicated zones and defined periods of neurogenesis during
    embryonic development. Disruptions in neurogenesis can lead to alterations in
    the neuronal cytoarchitecture, which is thought to represent a major underlying
    cause for several neurological disorders, including microcephaly, autism and epilepsy.
    Although a number of signaling pathways regulating neurogenesis have been described,
    the precise cellular and molecular mechanisms regulating the functional neural
    stem cell properties in cortical neurogenesis remain unclear. Here, we discuss
    the most up-to-date strategies to monitor the fundamental mechanistic parameters
    of neuronal progenitor proliferation, and recent advances deciphering the logic
    and dynamics of neurogenesis.
article_processing_charge: No
author:
- first_name: Maria P
  full_name: Postiglione, Maria P
  id: 2C67902A-F248-11E8-B48F-1D18A9856A87
  last_name: Postiglione
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
citation:
  ama: 'Postiglione MP, Hippenmeyer S. Monitoring neurogenesis in the cerebral cortex:
    an update. <i>Future Neurology</i>. 2014;9(3):323-340. doi:<a href="https://doi.org/10.2217/fnl.14.18">10.2217/fnl.14.18</a>'
  apa: 'Postiglione, M. P., &#38; Hippenmeyer, S. (2014). Monitoring neurogenesis
    in the cerebral cortex: an update. <i>Future Neurology</i>. Future Science Group.
    <a href="https://doi.org/10.2217/fnl.14.18">https://doi.org/10.2217/fnl.14.18</a>'
  chicago: 'Postiglione, Maria P, and Simon Hippenmeyer. “Monitoring Neurogenesis
    in the Cerebral Cortex: An Update.” <i>Future Neurology</i>. Future Science Group,
    2014. <a href="https://doi.org/10.2217/fnl.14.18">https://doi.org/10.2217/fnl.14.18</a>.'
  ieee: 'M. P. Postiglione and S. Hippenmeyer, “Monitoring neurogenesis in the cerebral
    cortex: an update,” <i>Future Neurology</i>, vol. 9, no. 3. Future Science Group,
    pp. 323–340, 2014.'
  ista: 'Postiglione MP, Hippenmeyer S. 2014. Monitoring neurogenesis in the cerebral
    cortex: an update. Future Neurology. 9(3), 323–340.'
  mla: 'Postiglione, Maria P., and Simon Hippenmeyer. “Monitoring Neurogenesis in
    the Cerebral Cortex: An Update.” <i>Future Neurology</i>, vol. 9, no. 3, Future
    Science Group, 2014, pp. 323–40, doi:<a href="https://doi.org/10.2217/fnl.14.18">10.2217/fnl.14.18</a>.'
  short: M.P. Postiglione, S. Hippenmeyer, Future Neurology 9 (2014) 323–340.
date_created: 2018-12-11T11:56:09Z
date_published: 2014-05-01T00:00:00Z
date_updated: 2023-10-17T08:34:27Z
day: '01'
ddc:
- '570'
department:
- _id: SiHi
doi: 10.2217/fnl.14.18
ec_funded: 1
file:
- access_level: open_access
  checksum: ba06659ecadabceec9a37dd8c4586dce
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:10:25Z
  date_updated: 2020-07-14T12:45:31Z
  file_id: '4812'
  file_name: IST-2016-528-v1+1_fnl.14.18.pdf
  file_size: 3848424
  relation: main_file
file_date_updated: 2020-07-14T12:45:31Z
has_accepted_license: '1'
intvolume: '         9'
issue: '3'
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
page: 323 - 340
project:
- _id: 25D61E48-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '618444'
  name: Molecular Mechanisms of Cerebral Cortex Development
publication: Future Neurology
publication_identifier:
  eissn:
  - 1748-6971
  issn:
  - 1479-6708
publication_status: published
publisher: Future Science Group
publist_id: '4806'
pubrep_id: '528'
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Monitoring neurogenesis in the cerebral cortex: an update'
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 9
year: '2014'
...
---
_id: '2261'
abstract:
- lang: eng
  text: To reveal the full potential of human pluripotent stem cells, new methods
    for rapid, site-specific genomic engineering are needed. Here, we describe a system
    for precise genetic modification of human embryonic stem cells (ESCs) and induced
    pluripotent stem cells (iPSCs). We identified a novel human locus, H11, located
    in a safe, intergenic, transcriptionally active region of chromosome 22, as the
    recipient site, to provide robust, ubiquitous expression of inserted genes. Recipient
    cell lines were established by site-specific placement of a ‘landing pad’ cassette
    carrying attP sites for phiC31 and Bxb1 integrases at the H11 locus by spontaneous
    or TALEN-assisted homologous recombination. Dual integrase cassette exchange (DICE)
    mediated by phiC31 and Bxb1 integrases was used to insert genes of interest flanked
    by phiC31 and Bxb1 attB sites at the H11 locus, replacing the landing pad. This
    system provided complete control over content, direction and copy number of inserted
    genes, with a specificity of 100%. A series of genes, including mCherry and various
    combinations of the neural transcription factors LMX1a, FOXA2 and OTX2, were inserted
    in recipient cell lines derived from H9 ESC, as well as iPSC lines derived from
    a Parkinson’s disease patient and a normal sibling control. The DICE system offers
    rapid, efficient and precise gene insertion in ESC and iPSC and is particularly
    well suited for repeated modifications of the same locus.
acknowledgement: "California Institute for Regenerative Medicine [RT2-01880 and TR2-01756].
  Funding for open access charge: California Institute for Regenerative Medicine [RT2-01880
  and TR2-01756]\r\nCC BY 3,0"
article_number: e34
author:
- first_name: Fangfang
  full_name: Zhu, Fangfang
  last_name: Zhu
- first_name: Matthew
  full_name: Gamboa, Matthew
  last_name: Gamboa
- first_name: Alfonso
  full_name: Farruggio, Alfonso
  last_name: Farruggio
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
- first_name: Bosiljka
  full_name: Tasic, Bosiljka
  last_name: Tasic
- first_name: Birgitt
  full_name: Schüle, Birgitt
  last_name: Schüle
- first_name: Yanru
  full_name: Chen Tsai, Yanru
  last_name: Chen Tsai
- first_name: Michele
  full_name: Calos, Michele
  last_name: Calos
citation:
  ama: Zhu F, Gamboa M, Farruggio A, et al. DICE, an efficient system for iterative
    genomic editing in human pluripotent stem cells. <i>Nucleic Acids Research</i>.
    2014;42(5). doi:<a href="https://doi.org/10.1093/nar/gkt1290">10.1093/nar/gkt1290</a>
  apa: Zhu, F., Gamboa, M., Farruggio, A., Hippenmeyer, S., Tasic, B., Schüle, B.,
    … Calos, M. (2014). DICE, an efficient system for iterative genomic editing in
    human pluripotent stem cells. <i>Nucleic Acids Research</i>. Oxford University
    Press. <a href="https://doi.org/10.1093/nar/gkt1290">https://doi.org/10.1093/nar/gkt1290</a>
  chicago: Zhu, Fangfang, Matthew Gamboa, Alfonso Farruggio, Simon Hippenmeyer, Bosiljka
    Tasic, Birgitt Schüle, Yanru Chen Tsai, and Michele Calos. “DICE, an Efficient
    System for Iterative Genomic Editing in Human Pluripotent Stem Cells.” <i>Nucleic
    Acids Research</i>. Oxford University Press, 2014. <a href="https://doi.org/10.1093/nar/gkt1290">https://doi.org/10.1093/nar/gkt1290</a>.
  ieee: F. Zhu <i>et al.</i>, “DICE, an efficient system for iterative genomic editing
    in human pluripotent stem cells,” <i>Nucleic Acids Research</i>, vol. 42, no.
    5. Oxford University Press, 2014.
  ista: Zhu F, Gamboa M, Farruggio A, Hippenmeyer S, Tasic B, Schüle B, Chen Tsai
    Y, Calos M. 2014. DICE, an efficient system for iterative genomic editing in human
    pluripotent stem cells. Nucleic Acids Research. 42(5), e34.
  mla: Zhu, Fangfang, et al. “DICE, an Efficient System for Iterative Genomic Editing
    in Human Pluripotent Stem Cells.” <i>Nucleic Acids Research</i>, vol. 42, no.
    5, e34, Oxford University Press, 2014, doi:<a href="https://doi.org/10.1093/nar/gkt1290">10.1093/nar/gkt1290</a>.
  short: F. Zhu, M. Gamboa, A. Farruggio, S. Hippenmeyer, B. Tasic, B. Schüle, Y.
    Chen Tsai, M. Calos, Nucleic Acids Research 42 (2014).
date_created: 2018-12-11T11:56:38Z
date_published: 2014-03-05T00:00:00Z
date_updated: 2021-01-12T06:56:22Z
day: '05'
ddc:
- '571'
- '610'
department:
- _id: SiHi
doi: 10.1093/nar/gkt1290
file:
- access_level: open_access
  checksum: e9268f5f96a820f04d7ebbf85927c3cb
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:09:15Z
  date_updated: 2020-07-14T12:45:35Z
  file_id: '4738'
  file_name: IST-2018-961-v1+1_2014_Hippenmeyer_DICE.pdf
  file_size: 11044478
  relation: main_file
file_date_updated: 2020-07-14T12:45:35Z
has_accepted_license: '1'
intvolume: '        42'
issue: '5'
language:
- iso: eng
month: '03'
oa: 1
oa_version: Preprint
publication: Nucleic Acids Research
publication_status: published
publisher: Oxford University Press
publist_id: '4684'
pubrep_id: '961'
quality_controlled: '1'
scopus_import: 1
status: public
title: DICE, an efficient system for iterative genomic editing in human pluripotent
  stem cells
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 42
year: '2014'
...
---
_id: '2265'
abstract:
- lang: eng
  text: Coordinated migration of newly-born neurons to their target territories is
    essential for correct neuronal circuit assembly in the developing brain. Although
    a cohort of signaling pathways has been implicated in the regulation of cortical
    projection neuron migration, the precise molecular mechanisms and how a balanced
    interplay of cell-autonomous and non-autonomous functions of candidate signaling
    molecules controls the discrete steps in the migration process, are just being
    revealed. In this chapter, I will focally review recent advances that improved
    our understanding of the cell-autonomous and possible cell-nonautonomous functions
    of the evolutionarily conserved LIS1/NDEL1-complex in regulating the sequential
    steps of cortical projection neuron migration. I will then elaborate on the emerging
    concept that the Reelin signaling pathway, acts exactly at precise stages in the
    course of cortical projection neuron migration. Lastly, I will discuss how finely
    tuned transcriptional programs and downstream effectors govern particular aspects
    in driving radial migration at discrete stages and how they regulate the precise
    positioning of cortical projection neurons in the developing cerebral cortex.
alternative_title:
- Advances in Experimental Medicine and Biology
author:
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
citation:
  ama: 'Hippenmeyer S. Molecular pathways controlling the sequential steps of cortical
    projection neuron migration. In: Nguyen L, ed. <i> Cellular and Molecular Control
    of Neuronal Migration</i>. Vol 800. Springer; 2014:1-24. doi:<a href="https://doi.org/10.1007/978-94-007-7687-6_1">10.1007/978-94-007-7687-6_1</a>'
  apa: Hippenmeyer, S. (2014). Molecular pathways controlling the sequential steps
    of cortical projection neuron migration. In L. Nguyen (Ed.), <i> Cellular and
    Molecular Control of Neuronal Migration</i> (Vol. 800, pp. 1–24). Springer. <a
    href="https://doi.org/10.1007/978-94-007-7687-6_1">https://doi.org/10.1007/978-94-007-7687-6_1</a>
  chicago: Hippenmeyer, Simon. “Molecular Pathways Controlling the Sequential Steps
    of Cortical Projection Neuron Migration.” In <i> Cellular and Molecular Control
    of Neuronal Migration</i>, edited by Laurent Nguyen, 800:1–24. Springer, 2014.
    <a href="https://doi.org/10.1007/978-94-007-7687-6_1">https://doi.org/10.1007/978-94-007-7687-6_1</a>.
  ieee: S. Hippenmeyer, “Molecular pathways controlling the sequential steps of cortical
    projection neuron migration,” in <i> Cellular and Molecular Control of Neuronal
    Migration</i>, vol. 800, L. Nguyen, Ed. Springer, 2014, pp. 1–24.
  ista: 'Hippenmeyer S. 2014.Molecular pathways controlling the sequential steps of
    cortical projection neuron migration. In:  Cellular and Molecular Control of Neuronal
    Migration. Advances in Experimental Medicine and Biology, vol. 800, 1–24.'
  mla: Hippenmeyer, Simon. “Molecular Pathways Controlling the Sequential Steps of
    Cortical Projection Neuron Migration.” <i> Cellular and Molecular Control of Neuronal
    Migration</i>, edited by Laurent Nguyen, vol. 800, Springer, 2014, pp. 1–24, doi:<a
    href="https://doi.org/10.1007/978-94-007-7687-6_1">10.1007/978-94-007-7687-6_1</a>.
  short: S. Hippenmeyer, in:, L. Nguyen (Ed.),  Cellular and Molecular Control of
    Neuronal Migration, Springer, 2014, pp. 1–24.
date_created: 2018-12-11T11:56:39Z
date_published: 2014-01-01T00:00:00Z
date_updated: 2021-01-12T06:56:23Z
day: '01'
department:
- _id: SiHi
doi: 10.1007/978-94-007-7687-6_1
editor:
- first_name: Laurent
  full_name: Nguyen, Laurent
  last_name: Nguyen
intvolume: '       800'
language:
- iso: eng
month: '01'
oa_version: None
page: 1 - 24
publication: ' Cellular and Molecular Control of Neuronal Migration'
publication_status: published
publisher: Springer
publist_id: '4679'
quality_controlled: '1'
scopus_import: 1
status: public
title: Molecular pathways controlling the sequential steps of cortical projection
  neuron migration
type: book_chapter
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 800
year: '2014'
...
---
_id: '2838'
abstract:
- lang: eng
  text: Individuals with Down syndrome (DS) present important motor deficits that
    derive from altered motor development of infants and young children. DYRK1A, a
    candidate gene for DS abnormalities has been implicated in motor function due
    to its expression in motor nuclei in the adult brain, and its overexpression in
    DS mouse models leads to hyperactivity and altered motor learning. However, its
    precise role in the adult motor system, or its possible involvement in postnatal
    locomotor development has not yet been clarified. During the postnatal period
    we observed time-specific expression of Dyrk1A in discrete subsets of brainstem
    nuclei and spinal cord motor neurons. Interestingly, we describe for the first
    time the presence of Dyrk1A in the presynaptic terminal of the neuromuscular junctions
    and its axonal transport from the facial nucleus, suggesting a function for Dyrk1A
    in these structures. Relevant to DS, Dyrk1A overexpression in transgenic mice
    (TgDyrk1A) produces motor developmental alterations possibly contributing to DS
    motor phenotypes and modifies the numbers of motor cholinergic neurons, suggesting
    that the kinase may have a role in the development of the brainstem and spinal
    cord motor system.
article_number: e54285
author:
- first_name: Gloria
  full_name: Arquè Fuste, Gloria
  id: 3CF33908-F248-11E8-B48F-1D18A9856A87
  last_name: Arquè Fuste
- first_name: Anna
  full_name: Casanovas, Anna
  last_name: Casanovas
- first_name: Mara
  full_name: Dierssen, Mara
  last_name: Dierssen
citation:
  ama: 'Arquè Fuste G, Casanovas A, Dierssen M. Dyrk1A is dynamically expressed on
    subsets of motor neurons and in the neuromuscular junction: Possible role in Down
    syndrome. <i>PLoS One</i>. 2013;8(1). doi:<a href="https://doi.org/10.1371/journal.pone.0054285">10.1371/journal.pone.0054285</a>'
  apa: 'Arquè Fuste, G., Casanovas, A., &#38; Dierssen, M. (2013). Dyrk1A is dynamically
    expressed on subsets of motor neurons and in the neuromuscular junction: Possible
    role in Down syndrome. <i>PLoS One</i>. Public Library of Science. <a href="https://doi.org/10.1371/journal.pone.0054285">https://doi.org/10.1371/journal.pone.0054285</a>'
  chicago: 'Arquè Fuste, Gloria, Anna Casanovas, and Mara Dierssen. “Dyrk1A Is Dynamically
    Expressed on Subsets of Motor Neurons and in the Neuromuscular Junction: Possible
    Role in Down Syndrome.” <i>PLoS One</i>. Public Library of Science, 2013. <a href="https://doi.org/10.1371/journal.pone.0054285">https://doi.org/10.1371/journal.pone.0054285</a>.'
  ieee: 'G. Arquè Fuste, A. Casanovas, and M. Dierssen, “Dyrk1A is dynamically expressed
    on subsets of motor neurons and in the neuromuscular junction: Possible role in
    Down syndrome,” <i>PLoS One</i>, vol. 8, no. 1. Public Library of Science, 2013.'
  ista: 'Arquè Fuste G, Casanovas A, Dierssen M. 2013. Dyrk1A is dynamically expressed
    on subsets of motor neurons and in the neuromuscular junction: Possible role in
    Down syndrome. PLoS One. 8(1), e54285.'
  mla: 'Arquè Fuste, Gloria, et al. “Dyrk1A Is Dynamically Expressed on Subsets of
    Motor Neurons and in the Neuromuscular Junction: Possible Role in Down Syndrome.”
    <i>PLoS One</i>, vol. 8, no. 1, e54285, Public Library of Science, 2013, doi:<a
    href="https://doi.org/10.1371/journal.pone.0054285">10.1371/journal.pone.0054285</a>.'
  short: G. Arquè Fuste, A. Casanovas, M. Dierssen, PLoS One 8 (2013).
date_created: 2018-12-11T11:59:52Z
date_published: 2013-01-16T00:00:00Z
date_updated: 2021-01-12T07:00:07Z
day: '16'
ddc:
- '570'
department:
- _id: SiHi
doi: 10.1371/journal.pone.0054285
file:
- access_level: open_access
  checksum: 512733b21419574a45f10cabef3d7f81
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:15:38Z
  date_updated: 2020-07-14T12:45:50Z
  file_id: '5160'
  file_name: IST-2016-407-v1+1_journal.pone.0054285.pdf
  file_size: 4795977
  relation: main_file
file_date_updated: 2020-07-14T12:45:50Z
has_accepted_license: '1'
intvolume: '         8'
issue: '1'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
publication: PLoS One
publication_status: published
publisher: Public Library of Science
publist_id: '3960'
pubrep_id: '407'
quality_controlled: '1'
scopus_import: 1
status: public
title: 'Dyrk1A is dynamically expressed on subsets of motor neurons and in the neuromuscular
  junction: Possible role in Down syndrome'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 8
year: '2013'
...
