---
_id: '5914'
abstract:
- lang: eng
  text: With the advent of optogenetics, it became possible to change the activity
    of a targeted population of neurons in a temporally controlled manner. To combine
    the advantages of 60-channel in vivo tetrode recording and laser-based optogenetics,
    we have developed a closed-loop recording system that allows for the actual electrophysiological
    signal to be used as a trigger for the laser light mediating the optogenetic intervention.
    We have optimized the weight, size, and shape of the corresponding implant to
    make it compatible with the size, force, and movements of a behaving mouse, and
    we have shown that the system can efficiently block sharp wave ripple (SWR) events
    using those events themselves as a trigger. To demonstrate the full potential
    of the optogenetic recording system we present a pilot study addressing the contribution
    of SWR events to learning in a complex behavioral task.
article_number: e0087
article_processing_charge: No
author:
- first_name: Dámaris K
  full_name: Rangel Guerrero, Dámaris K
  id: 4871BCE6-F248-11E8-B48F-1D18A9856A87
  last_name: Rangel Guerrero
  orcid: 0000-0002-8602-4374
- first_name: James G.
  full_name: Donnett, James G.
  last_name: Donnett
- first_name: Jozsef L
  full_name: Csicsvari, Jozsef L
  id: 3FA14672-F248-11E8-B48F-1D18A9856A87
  last_name: Csicsvari
  orcid: 0000-0002-5193-4036
- first_name: Krisztián
  full_name: Kovács, Krisztián
  id: 2AB5821E-F248-11E8-B48F-1D18A9856A87
  last_name: Kovács
  orcid: 0000-0001-6251-1007
citation:
  ama: 'Rangel Guerrero DK, Donnett JG, Csicsvari JL, Kovács K. Tetrode recording
    from the hippocampus of behaving mice coupled with four-point-irradiation closed-loop
    optogenetics: A technique to study the contribution of Hippocampal SWR events
    to learning. <i>eNeuro</i>. 2018;5(4). doi:<a href="https://doi.org/10.1523/ENEURO.0087-18.2018">10.1523/ENEURO.0087-18.2018</a>'
  apa: 'Rangel Guerrero, D. K., Donnett, J. G., Csicsvari, J. L., &#38; Kovács, K.
    (2018). Tetrode recording from the hippocampus of behaving mice coupled with four-point-irradiation
    closed-loop optogenetics: A technique to study the contribution of Hippocampal
    SWR events to learning. <i>ENeuro</i>. Society of Neuroscience. <a href="https://doi.org/10.1523/ENEURO.0087-18.2018">https://doi.org/10.1523/ENEURO.0087-18.2018</a>'
  chicago: 'Rangel Guerrero, Dámaris K, James G. Donnett, Jozsef L Csicsvari, and
    Krisztián Kovács. “Tetrode Recording from the Hippocampus of Behaving Mice Coupled
    with Four-Point-Irradiation Closed-Loop Optogenetics: A Technique to Study the
    Contribution of Hippocampal SWR Events to Learning.” <i>ENeuro</i>. Society of
    Neuroscience, 2018. <a href="https://doi.org/10.1523/ENEURO.0087-18.2018">https://doi.org/10.1523/ENEURO.0087-18.2018</a>.'
  ieee: 'D. K. Rangel Guerrero, J. G. Donnett, J. L. Csicsvari, and K. Kovács, “Tetrode
    recording from the hippocampus of behaving mice coupled with four-point-irradiation
    closed-loop optogenetics: A technique to study the contribution of Hippocampal
    SWR events to learning,” <i>eNeuro</i>, vol. 5, no. 4. Society of Neuroscience,
    2018.'
  ista: 'Rangel Guerrero DK, Donnett JG, Csicsvari JL, Kovács K. 2018. Tetrode recording
    from the hippocampus of behaving mice coupled with four-point-irradiation closed-loop
    optogenetics: A technique to study the contribution of Hippocampal SWR events
    to learning. eNeuro. 5(4), e0087.'
  mla: 'Rangel Guerrero, Dámaris K., et al. “Tetrode Recording from the Hippocampus
    of Behaving Mice Coupled with Four-Point-Irradiation Closed-Loop Optogenetics:
    A Technique to Study the Contribution of Hippocampal SWR Events to Learning.”
    <i>ENeuro</i>, vol. 5, no. 4, e0087, Society of Neuroscience, 2018, doi:<a href="https://doi.org/10.1523/ENEURO.0087-18.2018">10.1523/ENEURO.0087-18.2018</a>.'
  short: D.K. Rangel Guerrero, J.G. Donnett, J.L. Csicsvari, K. Kovács, ENeuro 5 (2018).
date_created: 2019-02-03T22:59:16Z
date_published: 2018-07-27T00:00:00Z
date_updated: 2024-03-25T23:30:06Z
day: '27'
ddc:
- '570'
department:
- _id: JoCs
doi: 10.1523/ENEURO.0087-18.2018
ec_funded: 1
external_id:
  isi:
  - '000443994700007'
file:
- access_level: open_access
  checksum: f4915d45fc7ad4648b7b7a13fdecca01
  content_type: application/pdf
  creator: dernst
  date_created: 2019-02-05T12:48:36Z
  date_updated: 2020-07-14T12:47:13Z
  file_id: '5921'
  file_name: 2018_ENeuro_Guerrero.pdf
  file_size: 3746884
  relation: main_file
file_date_updated: 2020-07-14T12:47:13Z
has_accepted_license: '1'
intvolume: '         5'
isi: 1
issue: '4'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
- _id: 257D4372-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: I2072-B27
  name: Interneuron plasticity during spatial learning
publication: eNeuro
publication_status: published
publisher: Society of Neuroscience
quality_controlled: '1'
related_material:
  record:
  - id: '6849'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: 'Tetrode recording from the hippocampus of behaving mice coupled with four-point-irradiation
  closed-loop optogenetics: A technique to study the contribution of Hippocampal SWR
  events to learning'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 5
year: '2018'
...
---
_id: '5959'
abstract:
- lang: eng
  text: Formalizing properties of systems with continuous dynamics is a challenging
    task. In this paper, we propose a formal framework for specifying and monitoring
    rich temporal properties of real-valued signals. We introduce signal first-order
    logic (SFO) as a specification language that combines first-order logic with linear-real
    arithmetic and unary function symbols interpreted as piecewise-linear signals.
    We first show that while the satisfiability problem for SFO is undecidable, its
    membership and monitoring problems are decidable. We develop an offline monitoring
    procedure for SFO that has polynomial complexity in the size of the input trace
    and the specification, for a fixed number of quantifiers and function symbols.
    We show that the algorithm has computation time linear in the size of the input
    trace for the important fragment of bounded-response specifications interpreted
    over input traces with finite variability. We can use our results to extend signal
    temporal logic with first-order quantifiers over time and value parameters, while
    preserving its efficient monitoring. We finally demonstrate the practical appeal
    of our logic through a case study in the micro-electronics domain.
article_processing_charge: No
author:
- first_name: Alexey
  full_name: Bakhirkin, Alexey
  last_name: Bakhirkin
- first_name: Thomas
  full_name: Ferrere, Thomas
  id: 40960E6E-F248-11E8-B48F-1D18A9856A87
  last_name: Ferrere
  orcid: 0000-0001-5199-3143
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Deian
  full_name: Nickovicl, Deian
  last_name: Nickovicl
citation:
  ama: 'Bakhirkin A, Ferrere T, Henzinger TA, Nickovicl D. Keynote: The first-order
    logic of signals. In: <i>2018 International Conference on Embedded Software</i>.
    IEEE; 2018:1-10. doi:<a href="https://doi.org/10.1109/emsoft.2018.8537203">10.1109/emsoft.2018.8537203</a>'
  apa: 'Bakhirkin, A., Ferrere, T., Henzinger, T. A., &#38; Nickovicl, D. (2018).
    Keynote: The first-order logic of signals. In <i>2018 International Conference
    on Embedded Software</i> (pp. 1–10). Turin, Italy: IEEE. <a href="https://doi.org/10.1109/emsoft.2018.8537203">https://doi.org/10.1109/emsoft.2018.8537203</a>'
  chicago: 'Bakhirkin, Alexey, Thomas Ferrere, Thomas A Henzinger, and Deian Nickovicl.
    “Keynote: The First-Order Logic of Signals.” In <i>2018 International Conference
    on Embedded Software</i>, 1–10. IEEE, 2018. <a href="https://doi.org/10.1109/emsoft.2018.8537203">https://doi.org/10.1109/emsoft.2018.8537203</a>.'
  ieee: 'A. Bakhirkin, T. Ferrere, T. A. Henzinger, and D. Nickovicl, “Keynote: The
    first-order logic of signals,” in <i>2018 International Conference on Embedded
    Software</i>, Turin, Italy, 2018, pp. 1–10.'
  ista: 'Bakhirkin A, Ferrere T, Henzinger TA, Nickovicl D. 2018. Keynote: The first-order
    logic of signals. 2018 International Conference on Embedded Software. EMSOFT:
    International Conference on Embedded Software, 1–10.'
  mla: 'Bakhirkin, Alexey, et al. “Keynote: The First-Order Logic of Signals.” <i>2018
    International Conference on Embedded Software</i>, IEEE, 2018, pp. 1–10, doi:<a
    href="https://doi.org/10.1109/emsoft.2018.8537203">10.1109/emsoft.2018.8537203</a>.'
  short: A. Bakhirkin, T. Ferrere, T.A. Henzinger, D. Nickovicl, in:, 2018 International
    Conference on Embedded Software, IEEE, 2018, pp. 1–10.
conference:
  end_date: 2018-10-05
  location: Turin, Italy
  name: 'EMSOFT: International Conference on Embedded Software'
  start_date: 2018-09-30
date_created: 2019-02-13T09:19:28Z
date_published: 2018-09-30T00:00:00Z
date_updated: 2023-09-19T10:41:29Z
day: '30'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.1109/emsoft.2018.8537203
external_id:
  isi:
  - '000492828500005'
file:
- access_level: open_access
  checksum: 234a33ad9055b3458fcdda6af251b33a
  content_type: application/pdf
  creator: dernst
  date_created: 2020-05-14T16:01:29Z
  date_updated: 2020-07-14T12:47:13Z
  file_id: '7839'
  file_name: 2018_EMSOFT_Bakhirkin.pdf
  file_size: 338006
  relation: main_file
file_date_updated: 2020-07-14T12:47:13Z
has_accepted_license: '1'
isi: 1
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
page: 1-10
project:
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S 11407_N23
  name: Rigorous Systems Engineering
- _id: 25F42A32-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: Z211
  name: The Wittgenstein Prize
publication: 2018 International Conference on Embedded Software
publication_identifier:
  isbn:
  - '9781538655603'
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Keynote: The first-order logic of signals'
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
year: '2018'
...
---
_id: '5960'
abstract:
- lang: eng
  text: In this paper we present a reliable method to verify the existence of loops
    along the uncertain trajectory of a robot, based on proprioceptive measurements
    only, within a bounded-error context. The loop closure detection is one of the
    key points in simultaneous localization and mapping (SLAM) methods, especially
    in homogeneous environments with difficult scenes recognitions. The proposed approach
    is generic and could be coupled with conventional SLAM algorithms to reliably
    reduce their computing burden, thus improving the localization and mapping processes
    in the most challenging environments such as unexplored underwater extents. To
    prove that a robot performed a loop whatever the uncertainties in its evolution,
    we employ the notion of topological degree that originates in the field of differential
    topology. We show that a verification tool based on the topological degree is
    an optimal method for proving robot loops. This is demonstrated both on datasets
    from real missions involving autonomous underwater vehicles and by a mathematical
    discussion.
article_processing_charge: No
arxiv: 1
author:
- first_name: Simon
  full_name: Rohou, Simon
  last_name: Rohou
- first_name: Peter
  full_name: Franek, Peter
  id: 473294AE-F248-11E8-B48F-1D18A9856A87
  last_name: Franek
  orcid: 0000-0001-8878-8397
- first_name: Clément
  full_name: Aubry, Clément
  last_name: Aubry
- first_name: Luc
  full_name: Jaulin, Luc
  last_name: Jaulin
citation:
  ama: Rohou S, Franek P, Aubry C, Jaulin L. Proving the existence of loops in robot
    trajectories. <i>The International Journal of Robotics Research</i>. 2018;37(12):1500-1516.
    doi:<a href="https://doi.org/10.1177/0278364918808367">10.1177/0278364918808367</a>
  apa: Rohou, S., Franek, P., Aubry, C., &#38; Jaulin, L. (2018). Proving the existence
    of loops in robot trajectories. <i>The International Journal of Robotics Research</i>.
    SAGE Publications. <a href="https://doi.org/10.1177/0278364918808367">https://doi.org/10.1177/0278364918808367</a>
  chicago: Rohou, Simon, Peter Franek, Clément Aubry, and Luc Jaulin. “Proving the
    Existence of Loops in Robot Trajectories.” <i>The International Journal of Robotics
    Research</i>. SAGE Publications, 2018. <a href="https://doi.org/10.1177/0278364918808367">https://doi.org/10.1177/0278364918808367</a>.
  ieee: S. Rohou, P. Franek, C. Aubry, and L. Jaulin, “Proving the existence of loops
    in robot trajectories,” <i>The International Journal of Robotics Research</i>,
    vol. 37, no. 12. SAGE Publications, pp. 1500–1516, 2018.
  ista: Rohou S, Franek P, Aubry C, Jaulin L. 2018. Proving the existence of loops
    in robot trajectories. The International Journal of Robotics Research. 37(12),
    1500–1516.
  mla: Rohou, Simon, et al. “Proving the Existence of Loops in Robot Trajectories.”
    <i>The International Journal of Robotics Research</i>, vol. 37, no. 12, SAGE Publications,
    2018, pp. 1500–16, doi:<a href="https://doi.org/10.1177/0278364918808367">10.1177/0278364918808367</a>.
  short: S. Rohou, P. Franek, C. Aubry, L. Jaulin, The International Journal of Robotics
    Research 37 (2018) 1500–1516.
date_created: 2019-02-13T09:36:20Z
date_published: 2018-10-24T00:00:00Z
date_updated: 2023-09-19T10:41:59Z
day: '24'
department:
- _id: UlWa
doi: 10.1177/0278364918808367
external_id:
  arxiv:
  - '1712.01341'
  isi:
  - '000456881100004'
intvolume: '        37'
isi: 1
issue: '12'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1712.01341
month: '10'
oa: 1
oa_version: Preprint
page: 1500-1516
publication: The International Journal of Robotics Research
publication_identifier:
  eissn:
  - 1741-3176
  issn:
  - 0278-3649
publication_status: published
publisher: SAGE Publications
quality_controlled: '1'
scopus_import: '1'
status: public
title: Proving the existence of loops in robot trajectories
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 37
year: '2018'
...
---
_id: '5961'
abstract:
- lang: eng
  text: "The area of machine learning has made considerable progress over the past
    decade, enabled by the widespread availability of large datasets, as well as by
    improved algorithms and models. Given the large computational demands of machine
    learning workloads, parallelism, implemented either through single-node concurrency
    or through multi-node distribution, has been a third key ingredient to advances
    in machine learning.\r\nThe goal of this tutorial is to provide the audience with
    an overview of standard distribution techniques in machine learning, with an eye
    towards the intriguing trade-offs between synchronization and communication costs
    of distributed machine learning algorithms, on the one hand, and their convergence,
    on the other.The tutorial will focus on parallelization strategies for the fundamental
    stochastic gradient descent (SGD) algorithm, which is a key tool when training
    machine learning models, from classical instances such as linear regression, to
    state-of-the-art neural network architectures.\r\nThe tutorial will describe the
    guarantees provided by this algorithm in the sequential case, and then move on
    to cover both shared-memory and message-passing parallelization strategies, together
    with the guarantees they provide, and corresponding trade-offs. The presentation
    will conclude with a broad overview of ongoing research in distributed and concurrent
    machine learning. The tutorial will assume no prior knowledge beyond familiarity
    with basic concepts in algebra and analysis.\r\n"
article_processing_charge: No
author:
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
citation:
  ama: 'Alistarh D-A. A brief tutorial on distributed and concurrent machine learning.
    In: <i>Proceedings of the 2018 ACM Symposium on Principles of Distributed Computing 
    - PODC ’18</i>. ACM Press; 2018:487-488. doi:<a href="https://doi.org/10.1145/3212734.3212798">10.1145/3212734.3212798</a>'
  apa: 'Alistarh, D.-A. (2018). A brief tutorial on distributed and concurrent machine
    learning. In <i>Proceedings of the 2018 ACM Symposium on Principles of Distributed
    Computing  - PODC ’18</i> (pp. 487–488). Egham, United Kingdom: ACM Press. <a
    href="https://doi.org/10.1145/3212734.3212798">https://doi.org/10.1145/3212734.3212798</a>'
  chicago: Alistarh, Dan-Adrian. “A Brief Tutorial on Distributed and Concurrent Machine
    Learning.” In <i>Proceedings of the 2018 ACM Symposium on Principles of Distributed
    Computing  - PODC ’18</i>, 487–88. ACM Press, 2018. <a href="https://doi.org/10.1145/3212734.3212798">https://doi.org/10.1145/3212734.3212798</a>.
  ieee: D.-A. Alistarh, “A brief tutorial on distributed and concurrent machine learning,”
    in <i>Proceedings of the 2018 ACM Symposium on Principles of Distributed Computing 
    - PODC ’18</i>, Egham, United Kingdom, 2018, pp. 487–488.
  ista: 'Alistarh D-A. 2018. A brief tutorial on distributed and concurrent machine
    learning. Proceedings of the 2018 ACM Symposium on Principles of Distributed Computing 
    - PODC ’18. PODC: Principles of Distributed Computing, 487–488.'
  mla: Alistarh, Dan-Adrian. “A Brief Tutorial on Distributed and Concurrent Machine
    Learning.” <i>Proceedings of the 2018 ACM Symposium on Principles of Distributed
    Computing  - PODC ’18</i>, ACM Press, 2018, pp. 487–88, doi:<a href="https://doi.org/10.1145/3212734.3212798">10.1145/3212734.3212798</a>.
  short: D.-A. Alistarh, in:, Proceedings of the 2018 ACM Symposium on Principles
    of Distributed Computing  - PODC ’18, ACM Press, 2018, pp. 487–488.
conference:
  end_date: 2018-07-27
  location: Egham, United Kingdom
  name: 'PODC: Principles of Distributed Computing'
  start_date: 2018-07-23
date_created: 2019-02-13T09:48:55Z
date_published: 2018-07-27T00:00:00Z
date_updated: 2023-09-19T10:42:28Z
day: '27'
department:
- _id: DaAl
doi: 10.1145/3212734.3212798
external_id:
  isi:
  - '000458186900063'
isi: 1
language:
- iso: eng
month: '07'
oa_version: None
page: 487-488
publication: Proceedings of the 2018 ACM Symposium on Principles of Distributed Computing  -
  PODC '18
publication_identifier:
  isbn:
  - '9781450357951'
publication_status: published
publisher: ACM Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: A brief tutorial on distributed and concurrent machine learning
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
year: '2018'
...
---
_id: '5962'
abstract:
- lang: eng
  text: Stochastic Gradient Descent (SGD) is a fundamental algorithm in machine learning,
    representing the optimization backbone for training several classic models, from
    regression to neural networks. Given the recent practical focus on distributed
    machine learning, significant work has been dedicated to the convergence properties
    of this algorithm under the inconsistent and noisy updates arising from execution
    in a distributed environment. However, surprisingly, the convergence properties
    of this classic algorithm in the standard shared-memory model are still not well-understood.
    In this work, we address this gap, and provide new convergence bounds for lock-free
    concurrent stochastic gradient descent, executing in the classic asynchronous
    shared memory model, against a strong adaptive adversary. Our results give improved
    upper and lower bounds on the "price of asynchrony'' when executing the fundamental
    SGD algorithm in a concurrent setting. They show that this classic optimization
    tool can converge faster and with a wider range of parameters than previously
    known under asynchronous iterations. At the same time, we exhibit a fundamental
    trade-off between the maximum delay in the system and the rate at which SGD can
    converge, which governs the set of parameters under which this algorithm can still
    work efficiently.
article_processing_charge: No
arxiv: 1
author:
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
- first_name: Christopher
  full_name: De Sa, Christopher
  last_name: De Sa
- first_name: Nikola H
  full_name: Konstantinov, Nikola H
  id: 4B9D76E4-F248-11E8-B48F-1D18A9856A87
  last_name: Konstantinov
citation:
  ama: 'Alistarh D-A, De Sa C, Konstantinov NH. The convergence of stochastic gradient
    descent in asynchronous shared memory. In: <i>Proceedings of the 2018 ACM Symposium
    on Principles of Distributed Computing  - PODC ’18</i>. ACM Press; 2018:169-178.
    doi:<a href="https://doi.org/10.1145/3212734.3212763">10.1145/3212734.3212763</a>'
  apa: 'Alistarh, D.-A., De Sa, C., &#38; Konstantinov, N. H. (2018). The convergence
    of stochastic gradient descent in asynchronous shared memory. In <i>Proceedings
    of the 2018 ACM Symposium on Principles of Distributed Computing  - PODC ’18</i>
    (pp. 169–178). Egham, United Kingdom: ACM Press. <a href="https://doi.org/10.1145/3212734.3212763">https://doi.org/10.1145/3212734.3212763</a>'
  chicago: Alistarh, Dan-Adrian, Christopher De Sa, and Nikola H Konstantinov. “The
    Convergence of Stochastic Gradient Descent in Asynchronous Shared Memory.” In
    <i>Proceedings of the 2018 ACM Symposium on Principles of Distributed Computing 
    - PODC ’18</i>, 169–78. ACM Press, 2018. <a href="https://doi.org/10.1145/3212734.3212763">https://doi.org/10.1145/3212734.3212763</a>.
  ieee: D.-A. Alistarh, C. De Sa, and N. H. Konstantinov, “The convergence of stochastic
    gradient descent in asynchronous shared memory,” in <i>Proceedings of the 2018
    ACM Symposium on Principles of Distributed Computing  - PODC ’18</i>, Egham, United
    Kingdom, 2018, pp. 169–178.
  ista: 'Alistarh D-A, De Sa C, Konstantinov NH. 2018. The convergence of stochastic
    gradient descent in asynchronous shared memory. Proceedings of the 2018 ACM Symposium
    on Principles of Distributed Computing  - PODC ’18. PODC: Principles of Distributed
    Computing, 169–178.'
  mla: Alistarh, Dan-Adrian, et al. “The Convergence of Stochastic Gradient Descent
    in Asynchronous Shared Memory.” <i>Proceedings of the 2018 ACM Symposium on Principles
    of Distributed Computing  - PODC ’18</i>, ACM Press, 2018, pp. 169–78, doi:<a
    href="https://doi.org/10.1145/3212734.3212763">10.1145/3212734.3212763</a>.
  short: D.-A. Alistarh, C. De Sa, N.H. Konstantinov, in:, Proceedings of the 2018
    ACM Symposium on Principles of Distributed Computing  - PODC ’18, ACM Press, 2018,
    pp. 169–178.
conference:
  end_date: 2018-07-27
  location: Egham, United Kingdom
  name: 'PODC: Principles of Distributed Computing'
  start_date: 2018-07-23
date_created: 2019-02-13T09:58:58Z
date_published: 2018-07-23T00:00:00Z
date_updated: 2023-09-19T10:42:53Z
day: '23'
department:
- _id: DaAl
doi: 10.1145/3212734.3212763
external_id:
  arxiv:
  - '1803.08841'
  isi:
  - '000458186900022'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1803.08841
month: '07'
oa: 1
oa_version: Preprint
page: 169-178
publication: Proceedings of the 2018 ACM Symposium on Principles of Distributed Computing  -
  PODC '18
publication_identifier:
  isbn:
  - '9781450357951'
publication_status: published
publisher: ACM Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: The convergence of stochastic gradient descent in asynchronous shared memory
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
year: '2018'
...
---
_id: '5963'
abstract:
- lang: eng
  text: 'There has been significant progress in understanding the parallelism inherent
    to iterative sequential algorithms: for many classic algorithms, the depth of
    the dependence structure is now well understood, and scheduling techniques have
    been developed to exploit this shallow dependence structure for efficient parallel
    implementations. A related, applied research strand has studied methods by which
    certain iterative task-based algorithms can be efficiently parallelized via relaxed
    concurrent priority schedulers. These allow for high concurrency when inserting
    and removing tasks, at the cost of executing superfluous work due to the relaxed
    semantics of the scheduler. In this work, we take a step towards unifying these
    two research directions, by showing that there exists a family of relaxed priority
    schedulers that can efficiently and deterministically execute classic iterative
    algorithms such as greedy maximal independent set (MIS) and matching. Our primary
    result shows that, given a randomized scheduler with an expected relaxation factor
    of k in terms of the maximum allowed priority inversions on a task, and any graph
    on n vertices, the scheduler is able to execute greedy MIS with only an additive
    factor of \poly(k) expected additional iterations compared to an exact (but not
    scalable) scheduler. This counter-intuitive result demonstrates that the overhead
    of relaxation when computing MIS is not dependent on the input size or structure
    of the input graph. Experimental results show that this overhead can be clearly
    offset by the gain in performance due to the highly scalable scheduler. In sum,
    we present an efficient method to deterministically parallelize iterative sequential
    algorithms, with provable runtime guarantees in terms of the number of executed
    tasks to completion.'
article_processing_charge: No
arxiv: 1
author:
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
- first_name: Trevor A
  full_name: Brown, Trevor A
  id: 3569F0A0-F248-11E8-B48F-1D18A9856A87
  last_name: Brown
- first_name: Justin
  full_name: Kopinsky, Justin
  last_name: Kopinsky
- first_name: Giorgi
  full_name: Nadiradze, Giorgi
  last_name: Nadiradze
citation:
  ama: 'Alistarh D-A, Brown TA, Kopinsky J, Nadiradze G. Relaxed schedulers can efficiently
    parallelize iterative algorithms. In: <i>Proceedings of the 2018 ACM Symposium
    on Principles of Distributed Computing  - PODC ’18</i>. ACM Press; 2018:377-386.
    doi:<a href="https://doi.org/10.1145/3212734.3212756">10.1145/3212734.3212756</a>'
  apa: 'Alistarh, D.-A., Brown, T. A., Kopinsky, J., &#38; Nadiradze, G. (2018). Relaxed
    schedulers can efficiently parallelize iterative algorithms. In <i>Proceedings
    of the 2018 ACM Symposium on Principles of Distributed Computing  - PODC ’18</i>
    (pp. 377–386). Egham, United Kingdom: ACM Press. <a href="https://doi.org/10.1145/3212734.3212756">https://doi.org/10.1145/3212734.3212756</a>'
  chicago: Alistarh, Dan-Adrian, Trevor A Brown, Justin Kopinsky, and Giorgi Nadiradze.
    “Relaxed Schedulers Can Efficiently Parallelize Iterative Algorithms.” In <i>Proceedings
    of the 2018 ACM Symposium on Principles of Distributed Computing  - PODC ’18</i>,
    377–86. ACM Press, 2018. <a href="https://doi.org/10.1145/3212734.3212756">https://doi.org/10.1145/3212734.3212756</a>.
  ieee: D.-A. Alistarh, T. A. Brown, J. Kopinsky, and G. Nadiradze, “Relaxed schedulers
    can efficiently parallelize iterative algorithms,” in <i>Proceedings of the 2018
    ACM Symposium on Principles of Distributed Computing  - PODC ’18</i>, Egham, United
    Kingdom, 2018, pp. 377–386.
  ista: 'Alistarh D-A, Brown TA, Kopinsky J, Nadiradze G. 2018. Relaxed schedulers
    can efficiently parallelize iterative algorithms. Proceedings of the 2018 ACM
    Symposium on Principles of Distributed Computing  - PODC ’18. PODC: Principles
    of Distributed Computing, 377–386.'
  mla: Alistarh, Dan-Adrian, et al. “Relaxed Schedulers Can Efficiently Parallelize
    Iterative Algorithms.” <i>Proceedings of the 2018 ACM Symposium on Principles
    of Distributed Computing  - PODC ’18</i>, ACM Press, 2018, pp. 377–86, doi:<a
    href="https://doi.org/10.1145/3212734.3212756">10.1145/3212734.3212756</a>.
  short: D.-A. Alistarh, T.A. Brown, J. Kopinsky, G. Nadiradze, in:, Proceedings of
    the 2018 ACM Symposium on Principles of Distributed Computing  - PODC ’18, ACM
    Press, 2018, pp. 377–386.
conference:
  end_date: 2018-07-27
  location: Egham, United Kingdom
  name: 'PODC: Principles of Distributed Computing'
  start_date: 2018-07-23
date_created: 2019-02-13T10:03:25Z
date_published: 2018-07-23T00:00:00Z
date_updated: 2023-09-19T10:43:21Z
day: '23'
department:
- _id: DaAl
doi: 10.1145/3212734.3212756
external_id:
  arxiv:
  - '1808.04155'
  isi:
  - '000458186900048'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1808.04155
month: '07'
oa: 1
oa_version: Preprint
page: 377-386
publication: Proceedings of the 2018 ACM Symposium on Principles of Distributed Computing  -
  PODC '18
publication_identifier:
  isbn:
  - '9781450357951'
publication_status: published
publisher: ACM Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Relaxed schedulers can efficiently parallelize iterative algorithms
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
year: '2018'
...
---
_id: '5964'
abstract:
- lang: eng
  text: A standard design pattern found in many concurrent data structures, such as
    hash tables or ordered containers, is an alternation of parallelizable sections
    that incur no data conflicts and critical sections that must run sequentially
    and are protected with locks. A lock can be viewed as a queue that arbitrates
    the order in which the critical sections are executed, and a natural question
    is whether we can use stochastic analysis to predict the resulting throughput.
    As a preliminary evidence to the affirmative, we describe a simple model that
    can be used to predict the throughput of coarse-grained lock-based algorithms.
    We show that our model works well for CLH lock, and we expect it to work for other
    popular lock designs such as TTAS, MCS, etc.
article_processing_charge: No
author:
- first_name: Vitaly
  full_name: Aksenov, Vitaly
  last_name: Aksenov
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
- first_name: Petr
  full_name: Kuznetsov, Petr
  last_name: Kuznetsov
citation:
  ama: 'Aksenov V, Alistarh D-A, Kuznetsov P. Brief Announcement: Performance prediction
    for coarse-grained locking. In: <i>Proceedings of the 2018 ACM Symposium on Principles
    of Distributed Computing  - PODC ’18</i>. ACM Press; 2018:411-413. doi:<a href="https://doi.org/10.1145/3212734.3212785">10.1145/3212734.3212785</a>'
  apa: 'Aksenov, V., Alistarh, D.-A., &#38; Kuznetsov, P. (2018). Brief Announcement:
    Performance prediction for coarse-grained locking. In <i>Proceedings of the 2018
    ACM Symposium on Principles of Distributed Computing  - PODC ’18</i> (pp. 411–413).
    Egham, United Kingdom: ACM Press. <a href="https://doi.org/10.1145/3212734.3212785">https://doi.org/10.1145/3212734.3212785</a>'
  chicago: 'Aksenov, Vitaly, Dan-Adrian Alistarh, and Petr Kuznetsov. “Brief Announcement:
    Performance Prediction for Coarse-Grained Locking.” In <i>Proceedings of the 2018
    ACM Symposium on Principles of Distributed Computing  - PODC ’18</i>, 411–13.
    ACM Press, 2018. <a href="https://doi.org/10.1145/3212734.3212785">https://doi.org/10.1145/3212734.3212785</a>.'
  ieee: 'V. Aksenov, D.-A. Alistarh, and P. Kuznetsov, “Brief Announcement: Performance
    prediction for coarse-grained locking,” in <i>Proceedings of the 2018 ACM Symposium
    on Principles of Distributed Computing  - PODC ’18</i>, Egham, United Kingdom,
    2018, pp. 411–413.'
  ista: 'Aksenov V, Alistarh D-A, Kuznetsov P. 2018. Brief Announcement: Performance
    prediction for coarse-grained locking. Proceedings of the 2018 ACM Symposium on
    Principles of Distributed Computing  - PODC ’18. PODC: Principles of Distributed
    Computing, 411–413.'
  mla: 'Aksenov, Vitaly, et al. “Brief Announcement: Performance Prediction for Coarse-Grained
    Locking.” <i>Proceedings of the 2018 ACM Symposium on Principles of Distributed
    Computing  - PODC ’18</i>, ACM Press, 2018, pp. 411–13, doi:<a href="https://doi.org/10.1145/3212734.3212785">10.1145/3212734.3212785</a>.'
  short: V. Aksenov, D.-A. Alistarh, P. Kuznetsov, in:, Proceedings of the 2018 ACM
    Symposium on Principles of Distributed Computing  - PODC ’18, ACM Press, 2018,
    pp. 411–413.
conference:
  end_date: 2018-07-27
  location: Egham, United Kingdom
  name: 'PODC: Principles of Distributed Computing'
  start_date: 2018-07-23
date_created: 2019-02-13T10:08:19Z
date_published: 2018-07-23T00:00:00Z
date_updated: 2023-09-19T10:43:45Z
day: '23'
department:
- _id: DaAl
doi: 10.1145/3212734.3212785
external_id:
  isi:
  - '000458186900052'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://hal-univ-lyon3.archives-ouvertes.fr/INRIA/hal-01887733v1
month: '07'
oa: 1
oa_version: Submitted Version
page: 411-413
publication: Proceedings of the 2018 ACM Symposium on Principles of Distributed Computing  -
  PODC '18
publication_identifier:
  isbn:
  - '9781450357951'
publication_status: published
publisher: ACM Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Brief Announcement: Performance prediction for coarse-grained locking'
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
year: '2018'
...
---
_id: '5965'
abstract:
- lang: eng
  text: Relaxed concurrent data structures have become increasingly popular, due to
    their scalability in graph processing and machine learning applications (\citeNguyen13,
    gonzalez2012powergraph ). Despite considerable interest, there exist families
    of natural, high performing randomized relaxed concurrent data structures, such
    as the popular MultiQueue~\citeMQ pattern for implementing relaxed priority queue
    data structures, for which no guarantees are known in the concurrent setting~\citeAKLN17.
    Our main contribution is in showing for the first time that, under a set of analytic
    assumptions, a family of relaxed concurrent data structures, including variants
    of MultiQueues, but also a new approximate counting algorithm we call the MultiCounter,
    provides strong probabilistic guarantees on the degree of relaxation with respect
    to the sequential specification, in arbitrary concurrent executions. We formalize
    these guarantees via a new correctness condition called distributional linearizability,
    tailored to concurrent implementations with randomized relaxations. Our result
    is based on a new analysis of an asynchronous variant of the classic power-of-two-choices
    load balancing algorithm, in which placement choices can be based on inconsistent,
    outdated information (this result may be of independent interest). We validate
    our results empirically, showing that the MultiCounter algorithm can implement
    scalable relaxed timestamps.
article_processing_charge: No
arxiv: 1
author:
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
- first_name: Trevor A
  full_name: Brown, Trevor A
  id: 3569F0A0-F248-11E8-B48F-1D18A9856A87
  last_name: Brown
- first_name: Justin
  full_name: Kopinsky, Justin
  last_name: Kopinsky
- first_name: Jerry Z.
  full_name: Li, Jerry Z.
  last_name: Li
- first_name: Giorgi
  full_name: Nadiradze, Giorgi
  last_name: Nadiradze
citation:
  ama: 'Alistarh D-A, Brown TA, Kopinsky J, Li JZ, Nadiradze G. Distributionally linearizable
    data structures. In: <i>Proceedings of the 30th on Symposium on Parallelism in
    Algorithms and Architectures  - SPAA ’18</i>. ACM Press; 2018:133-142. doi:<a
    href="https://doi.org/10.1145/3210377.3210411">10.1145/3210377.3210411</a>'
  apa: 'Alistarh, D.-A., Brown, T. A., Kopinsky, J., Li, J. Z., &#38; Nadiradze, G.
    (2018). Distributionally linearizable data structures. In <i>Proceedings of the
    30th on Symposium on Parallelism in Algorithms and Architectures  - SPAA ’18</i>
    (pp. 133–142). Vienna, Austria: ACM Press. <a href="https://doi.org/10.1145/3210377.3210411">https://doi.org/10.1145/3210377.3210411</a>'
  chicago: Alistarh, Dan-Adrian, Trevor A Brown, Justin Kopinsky, Jerry Z. Li, and
    Giorgi Nadiradze. “Distributionally Linearizable Data Structures.” In <i>Proceedings
    of the 30th on Symposium on Parallelism in Algorithms and Architectures  - SPAA
    ’18</i>, 133–42. ACM Press, 2018. <a href="https://doi.org/10.1145/3210377.3210411">https://doi.org/10.1145/3210377.3210411</a>.
  ieee: D.-A. Alistarh, T. A. Brown, J. Kopinsky, J. Z. Li, and G. Nadiradze, “Distributionally
    linearizable data structures,” in <i>Proceedings of the 30th on Symposium on Parallelism
    in Algorithms and Architectures  - SPAA ’18</i>, Vienna, Austria, 2018, pp. 133–142.
  ista: 'Alistarh D-A, Brown TA, Kopinsky J, Li JZ, Nadiradze G. 2018. Distributionally
    linearizable data structures. Proceedings of the 30th on Symposium on Parallelism
    in Algorithms and Architectures  - SPAA ’18. SPAA: Symposium on Parallelism in
    Algorithms and Architectures, 133–142.'
  mla: Alistarh, Dan-Adrian, et al. “Distributionally Linearizable Data Structures.”
    <i>Proceedings of the 30th on Symposium on Parallelism in Algorithms and Architectures 
    - SPAA ’18</i>, ACM Press, 2018, pp. 133–42, doi:<a href="https://doi.org/10.1145/3210377.3210411">10.1145/3210377.3210411</a>.
  short: D.-A. Alistarh, T.A. Brown, J. Kopinsky, J.Z. Li, G. Nadiradze, in:, Proceedings
    of the 30th on Symposium on Parallelism in Algorithms and Architectures  - SPAA
    ’18, ACM Press, 2018, pp. 133–142.
conference:
  end_date: 2018-07-18
  location: Vienna, Austria
  name: 'SPAA: Symposium on Parallelism in Algorithms and Architectures'
  start_date: 2018-07-16
date_created: 2019-02-13T10:17:19Z
date_published: 2018-07-16T00:00:00Z
date_updated: 2023-09-19T10:44:13Z
day: '16'
department:
- _id: DaAl
doi: 10.1145/3210377.3210411
external_id:
  arxiv:
  - '1804.01018'
  isi:
  - '000545269600016'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1804.01018
month: '07'
oa: 1
oa_version: Preprint
page: 133-142
publication: Proceedings of the 30th on Symposium on Parallelism in Algorithms and
  Architectures  - SPAA '18
publication_identifier:
  isbn:
  - '9781450357999'
publication_status: published
publisher: ACM Press
quality_controlled: '1'
related_material:
  record:
  - id: '10429'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Distributionally linearizable data structures
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
year: '2018'
...
---
_id: '5966'
abstract:
- lang: eng
  text: 'The transactional conflict problem arises in transactional systems whenever
    two or more concurrent transactions clash on a data item. While the standard solution
    to such conflicts is to immediately abort one of the transactions, some practical
    systems consider the alternative of delaying conflict resolution for a short interval,
    which may allow one of the transactions to commit. The challenge in the transactional
    conflict problem is to choose the optimal length of this delay interval so as
    to minimize the overall running time penalty for the conflicting transactions.
    In this paper, we propose a family of optimal online algorithms for the transactional
    conflict problem. Specifically, we consider variants of this problem which arise
    in different implementations of transactional systems, namely "requestor wins''''
    and "requestor aborts'''' implementations: in the former, the recipient of a coherence
    request is aborted, whereas in the latter, it is the requestor which has to abort.
    Both strategies are implemented by real systems. We show that the requestor aborts
    case can be reduced to a classic instance of the ski rental problem, while the
    requestor wins case leads to a new version of this classical problem, for which
    we derive optimal deterministic and randomized algorithms. Moreover, we prove
    that, under a simplified adversarial model, our algorithms are constant-competitive
    with the offline optimum in terms of throughput. We validate our algorithmic results
    empirically through a hardware simulation of hardware transactional memory (HTM),
    showing that our algorithms can lead to non-trivial performance improvements for
    classic concurrent data structures.'
article_processing_charge: No
arxiv: 1
author:
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
- first_name: Syed Kamran
  full_name: Haider, Syed Kamran
  last_name: Haider
- first_name: Raphael
  full_name: Kübler, Raphael
  last_name: Kübler
- first_name: Giorgi
  full_name: Nadiradze, Giorgi
  last_name: Nadiradze
citation:
  ama: 'Alistarh D-A, Haider SK, Kübler R, Nadiradze G. The transactional conflict
    problem. In: <i>Proceedings of the 30th on Symposium on Parallelism in Algorithms
    and Architectures  - SPAA ’18</i>. ACM Press; 2018:383-392. doi:<a href="https://doi.org/10.1145/3210377.3210406">10.1145/3210377.3210406</a>'
  apa: 'Alistarh, D.-A., Haider, S. K., Kübler, R., &#38; Nadiradze, G. (2018). The
    transactional conflict problem. In <i>Proceedings of the 30th on Symposium on
    Parallelism in Algorithms and Architectures  - SPAA ’18</i> (pp. 383–392). Vienna,
    Austria: ACM Press. <a href="https://doi.org/10.1145/3210377.3210406">https://doi.org/10.1145/3210377.3210406</a>'
  chicago: Alistarh, Dan-Adrian, Syed Kamran Haider, Raphael Kübler, and Giorgi Nadiradze.
    “The Transactional Conflict Problem.” In <i>Proceedings of the 30th on Symposium
    on Parallelism in Algorithms and Architectures  - SPAA ’18</i>, 383–92. ACM Press,
    2018. <a href="https://doi.org/10.1145/3210377.3210406">https://doi.org/10.1145/3210377.3210406</a>.
  ieee: D.-A. Alistarh, S. K. Haider, R. Kübler, and G. Nadiradze, “The transactional
    conflict problem,” in <i>Proceedings of the 30th on Symposium on Parallelism in
    Algorithms and Architectures  - SPAA ’18</i>, Vienna, Austria, 2018, pp. 383–392.
  ista: 'Alistarh D-A, Haider SK, Kübler R, Nadiradze G. 2018. The transactional conflict
    problem. Proceedings of the 30th on Symposium on Parallelism in Algorithms and
    Architectures  - SPAA ’18. SPAA: Symposium on Parallelism in Algorithms and Architectures,
    383–392.'
  mla: Alistarh, Dan-Adrian, et al. “The Transactional Conflict Problem.” <i>Proceedings
    of the 30th on Symposium on Parallelism in Algorithms and Architectures  - SPAA
    ’18</i>, ACM Press, 2018, pp. 383–92, doi:<a href="https://doi.org/10.1145/3210377.3210406">10.1145/3210377.3210406</a>.
  short: D.-A. Alistarh, S.K. Haider, R. Kübler, G. Nadiradze, in:, Proceedings of
    the 30th on Symposium on Parallelism in Algorithms and Architectures  - SPAA ’18,
    ACM Press, 2018, pp. 383–392.
conference:
  end_date: 2018-07-18
  location: Vienna, Austria
  name: 'SPAA: Symposium on Parallelism in Algorithms and Architectures'
  start_date: 2018-07-16
date_created: 2019-02-13T10:26:07Z
date_published: 2018-07-16T00:00:00Z
date_updated: 2023-09-19T10:44:49Z
day: '16'
department:
- _id: DaAl
doi: 10.1145/3210377.3210406
external_id:
  arxiv:
  - '1804.00947'
  isi:
  - '000545269600046'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1804.00947
month: '07'
oa: 1
oa_version: Preprint
page: 383-392
publication: Proceedings of the 30th on Symposium on Parallelism in Algorithms and
  Architectures  - SPAA '18
publication_identifier:
  isbn:
  - '9781450357999'
publication_status: published
publisher: ACM Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: The transactional conflict problem
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
year: '2018'
...
---
_id: '5967'
abstract:
- lang: eng
  text: "The Big Match is a multi-stage two-player game. In each stage Player 1 hides
    one or two pebbles in his hand, and his opponent has to guess that number; Player
    1 loses a point if Player 2 is correct, and otherwise he wins a point. As soon
    as Player 1 hides one pebble, the players cannot change their choices in any future
    stage.\r\nBlackwell and Ferguson (1968) give an ε-optimal strategy for Player
    1 that hides, in each stage, one pebble with a probability that depends on the
    entire past history. Any strategy that depends just on the clock or on a finite
    memory is worthless. The long-standing natural open problem has been whether every
    strategy that depends just on the clock and a finite memory is worthless. We prove
    that there is such a strategy that is ε-optimal. In fact, we show that just two
    states of memory are sufficient.\r\n"
article_processing_charge: No
author:
- first_name: Kristoffer Arnsfelt
  full_name: Hansen, Kristoffer Arnsfelt
  last_name: Hansen
- first_name: Rasmus
  full_name: Ibsen-Jensen, Rasmus
  id: 3B699956-F248-11E8-B48F-1D18A9856A87
  last_name: Ibsen-Jensen
  orcid: 0000-0003-4783-0389
- first_name: Abraham
  full_name: Neyman, Abraham
  last_name: Neyman
citation:
  ama: 'Hansen KA, Ibsen-Jensen R, Neyman A. The Big Match with a clock and a bit
    of memory. In: <i>Proceedings of the 2018 ACM Conference on Economics and Computation 
    - EC ’18</i>. ACM Press; 2018:149-150. doi:<a href="https://doi.org/10.1145/3219166.3219198">10.1145/3219166.3219198</a>'
  apa: 'Hansen, K. A., Ibsen-Jensen, R., &#38; Neyman, A. (2018). The Big Match with
    a clock and a bit of memory. In <i>Proceedings of the 2018 ACM Conference on Economics
    and Computation  - EC ’18</i> (pp. 149–150). Ithaca, NY, United States: ACM Press.
    <a href="https://doi.org/10.1145/3219166.3219198">https://doi.org/10.1145/3219166.3219198</a>'
  chicago: Hansen, Kristoffer Arnsfelt, Rasmus Ibsen-Jensen, and Abraham Neyman. “The
    Big Match with a Clock and a Bit of Memory.” In <i>Proceedings of the 2018 ACM
    Conference on Economics and Computation  - EC ’18</i>, 149–50. ACM Press, 2018.
    <a href="https://doi.org/10.1145/3219166.3219198">https://doi.org/10.1145/3219166.3219198</a>.
  ieee: K. A. Hansen, R. Ibsen-Jensen, and A. Neyman, “The Big Match with a clock
    and a bit of memory,” in <i>Proceedings of the 2018 ACM Conference on Economics
    and Computation  - EC ’18</i>, Ithaca, NY, United States, 2018, pp. 149–150.
  ista: 'Hansen KA, Ibsen-Jensen R, Neyman A. 2018. The Big Match with a clock and
    a bit of memory. Proceedings of the 2018 ACM Conference on Economics and Computation 
    - EC ’18. EC: Conference on Economics and Computation, 149–150.'
  mla: Hansen, Kristoffer Arnsfelt, et al. “The Big Match with a Clock and a Bit of
    Memory.” <i>Proceedings of the 2018 ACM Conference on Economics and Computation 
    - EC ’18</i>, ACM Press, 2018, pp. 149–50, doi:<a href="https://doi.org/10.1145/3219166.3219198">10.1145/3219166.3219198</a>.
  short: K.A. Hansen, R. Ibsen-Jensen, A. Neyman, in:, Proceedings of the 2018 ACM
    Conference on Economics and Computation  - EC ’18, ACM Press, 2018, pp. 149–150.
conference:
  end_date: 2018-06-22
  location: Ithaca, NY, United States
  name: 'EC: Conference on Economics and Computation'
  start_date: 2018-06-18
date_created: 2019-02-13T10:31:41Z
date_published: 2018-06-18T00:00:00Z
date_updated: 2023-09-19T10:45:15Z
day: '18'
ddc:
- '000'
department:
- _id: KrCh
doi: 10.1145/3219166.3219198
external_id:
  isi:
  - '000492755100020'
file:
- access_level: open_access
  checksum: bb52683e349cfd864f4769a8f38f2798
  content_type: application/pdf
  creator: dernst
  date_created: 2019-11-19T08:24:24Z
  date_updated: 2020-07-14T12:47:14Z
  file_id: '7054'
  file_name: 2018_EC18_Hansen.pdf
  file_size: 302539
  relation: main_file
file_date_updated: 2020-07-14T12:47:14Z
has_accepted_license: '1'
isi: 1
language:
- iso: eng
month: '06'
oa: 1
oa_version: Submitted Version
page: 149-150
publication: Proceedings of the 2018 ACM Conference on Economics and Computation  -
  EC '18
publication_identifier:
  isbn:
  - '9781450358293'
publication_status: published
publisher: ACM Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: The Big Match with a clock and a bit of memory
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
year: '2018'
...
---
_id: '5971'
abstract:
- lang: eng
  text: "We consider a Wigner-type ensemble, i.e. large hermitian N×N random matrices
    H=H∗ with centered independent entries and with a general matrix of variances
    Sxy=\U0001D53C∣∣Hxy∣∣2. The norm of H is asymptotically given by the maximum of
    the support of the self-consistent density of states. We establish a bound on
    this maximum in terms of norms of powers of S that substantially improves the
    earlier bound 2∥S∥1/2∞ given in [O. Ajanki, L. Erdős and T. Krüger, Universality
    for general Wigner-type matrices, Prob. Theor. Rel. Fields169 (2017) 667–727].
    The key element of the proof is an effective Markov chain approximation for the
    contributions of the weighted Dyck paths appearing in the iterative solution of
    the corresponding Dyson equation."
article_number: '1950009'
article_processing_charge: No
arxiv: 1
author:
- first_name: László
  full_name: Erdös, László
  id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
  last_name: Erdös
  orcid: 0000-0001-5366-9603
- first_name: Peter
  full_name: Mühlbacher, Peter
  last_name: Mühlbacher
citation:
  ama: 'Erdös L, Mühlbacher P. Bounds on the norm of Wigner-type random matrices.
    <i>Random matrices: Theory and applications</i>. 2018. doi:<a href="https://doi.org/10.1142/s2010326319500096">10.1142/s2010326319500096</a>'
  apa: 'Erdös, L., &#38; Mühlbacher, P. (2018). Bounds on the norm of Wigner-type
    random matrices. <i>Random Matrices: Theory and Applications</i>. World Scientific
    Publishing. <a href="https://doi.org/10.1142/s2010326319500096">https://doi.org/10.1142/s2010326319500096</a>'
  chicago: 'Erdös, László, and Peter Mühlbacher. “Bounds on the Norm of Wigner-Type
    Random Matrices.” <i>Random Matrices: Theory and Applications</i>. World Scientific
    Publishing, 2018. <a href="https://doi.org/10.1142/s2010326319500096">https://doi.org/10.1142/s2010326319500096</a>.'
  ieee: 'L. Erdös and P. Mühlbacher, “Bounds on the norm of Wigner-type random matrices,”
    <i>Random matrices: Theory and applications</i>. World Scientific Publishing,
    2018.'
  ista: 'Erdös L, Mühlbacher P. 2018. Bounds on the norm of Wigner-type random matrices.
    Random matrices: Theory and applications., 1950009.'
  mla: 'Erdös, László, and Peter Mühlbacher. “Bounds on the Norm of Wigner-Type Random
    Matrices.” <i>Random Matrices: Theory and Applications</i>, 1950009, World Scientific
    Publishing, 2018, doi:<a href="https://doi.org/10.1142/s2010326319500096">10.1142/s2010326319500096</a>.'
  short: 'L. Erdös, P. Mühlbacher, Random Matrices: Theory and Applications (2018).'
date_created: 2019-02-13T10:40:54Z
date_published: 2018-09-26T00:00:00Z
date_updated: 2023-09-19T14:24:05Z
day: '26'
department:
- _id: LaEr
doi: 10.1142/s2010326319500096
ec_funded: 1
external_id:
  arxiv:
  - '1802.05175'
  isi:
  - '000477677200002'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1802.05175
month: '09'
oa: 1
oa_version: Preprint
project:
- _id: 258DCDE6-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '338804'
  name: Random matrices, universality and disordered quantum systems
publication: 'Random matrices: Theory and applications'
publication_identifier:
  eissn:
  - 2010-3271
  issn:
  - 2010-3263
publication_status: published
publisher: World Scientific Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Bounds on the norm of Wigner-type random matrices
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
year: '2018'
...
---
_id: '5975'
abstract:
- lang: eng
  text: We consider the recent formulation of the algorithmic Lov ́asz Local Lemma  [N.
    Har-vey and J. Vondr ́ak, inProceedings of FOCS, 2015, pp. 1327–1345; D. Achlioptas
    and F. Iliopoulos,inProceedings of SODA, 2016, pp. 2024–2038; D. Achlioptas, F.
    Iliopoulos, and V. Kolmogorov,ALocal Lemma for Focused Stochastic Algorithms,
    arXiv preprint, 2018] for finding objects that avoid“bad  features,”  or  “flaws.”   It  extends  the  Moser–Tardos  resampling  algorithm  [R.  A.  Moser  andG.
    Tardos,J. ACM, 57 (2010), 11] to more general discrete spaces.  At each step the
    method picks aflaw present in the current state and goes to a new state according
    to some prespecified probabilitydistribution (which depends on the current state
    and the selected flaw).  However, the recent formu-lation is less flexible than
    the Moser–Tardos method since it requires a specific flaw selection rule,whereas
    the algorithm of Moser and Tardos allows an arbitrary rule (and thus can potentially
    beimplemented more efficiently).  We formulate a new “commutativity” condition
    and prove that it issufficient for an arbitrary rule to work.  It also enables
    an efficient parallelization under an additionalassumption.  We then show that
    existing resampling oracles for perfect matchings and permutationsdo satisfy this
    condition.
article_processing_charge: No
arxiv: 1
author:
- first_name: Vladimir
  full_name: Kolmogorov, Vladimir
  id: 3D50B0BA-F248-11E8-B48F-1D18A9856A87
  last_name: Kolmogorov
citation:
  ama: Kolmogorov V. Commutativity in the algorithmic Lovász local lemma. <i>SIAM
    Journal on Computing</i>. 2018;47(6):2029-2056. doi:<a href="https://doi.org/10.1137/16m1093306">10.1137/16m1093306</a>
  apa: Kolmogorov, V. (2018). Commutativity in the algorithmic Lovász local lemma.
    <i>SIAM Journal on Computing</i>. Society for Industrial &#38; Applied Mathematics
    (SIAM). <a href="https://doi.org/10.1137/16m1093306">https://doi.org/10.1137/16m1093306</a>
  chicago: Kolmogorov, Vladimir. “Commutativity in the Algorithmic Lovász Local Lemma.”
    <i>SIAM Journal on Computing</i>. Society for Industrial &#38; Applied Mathematics
    (SIAM), 2018. <a href="https://doi.org/10.1137/16m1093306">https://doi.org/10.1137/16m1093306</a>.
  ieee: V. Kolmogorov, “Commutativity in the algorithmic Lovász local lemma,” <i>SIAM
    Journal on Computing</i>, vol. 47, no. 6. Society for Industrial &#38; Applied
    Mathematics (SIAM), pp. 2029–2056, 2018.
  ista: Kolmogorov V. 2018. Commutativity in the algorithmic Lovász local lemma. SIAM
    Journal on Computing. 47(6), 2029–2056.
  mla: Kolmogorov, Vladimir. “Commutativity in the Algorithmic Lovász Local Lemma.”
    <i>SIAM Journal on Computing</i>, vol. 47, no. 6, Society for Industrial &#38;
    Applied Mathematics (SIAM), 2018, pp. 2029–56, doi:<a href="https://doi.org/10.1137/16m1093306">10.1137/16m1093306</a>.
  short: V. Kolmogorov, SIAM Journal on Computing 47 (2018) 2029–2056.
date_created: 2019-02-13T12:59:33Z
date_published: 2018-11-08T00:00:00Z
date_updated: 2023-09-19T14:24:58Z
day: '08'
department:
- _id: VlKo
doi: 10.1137/16m1093306
ec_funded: 1
external_id:
  arxiv:
  - '1506.08547'
  isi:
  - '000453785100001'
intvolume: '        47'
isi: 1
issue: '6'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1506.08547
month: '11'
oa: 1
oa_version: Preprint
page: 2029-2056
project:
- _id: 25FBA906-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '616160'
  name: 'Discrete Optimization in Computer Vision: Theory and Practice'
publication: SIAM Journal on Computing
publication_identifier:
  eissn:
  - 1095-7111
  issn:
  - 0097-5397
publication_status: published
publisher: Society for Industrial & Applied Mathematics (SIAM)
quality_controlled: '1'
related_material:
  record:
  - id: '1193'
    relation: earlier_version
    status: public
scopus_import: '1'
status: public
title: Commutativity in the algorithmic Lovász local lemma
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 47
year: '2018'
...
---
_id: '5976'
abstract:
- lang: eng
  text: We propose FlexMaps, a novel framework for fabricating smooth shapes out of
    flat, flexible panels with tailored mechanical properties. We start by mapping
    the 3D surface onto a 2D domain as in traditional UV mapping to design a set of
    deformable flat panels called FlexMaps. For these panels, we design and obtain
    specific mechanical properties such that, once they are assembled, the static
    equilibrium configuration matches the desired 3D shape. FlexMaps can be fabricated
    from an almost rigid material, such as wood or plastic, and are made flexible
    in a controlled way by using computationally designed spiraling microstructures.
article_number: '241'
article_processing_charge: No
article_type: original
author:
- first_name: Luigi
  full_name: Malomo, Luigi
  last_name: Malomo
- first_name: Jesus
  full_name: Perez Rodriguez, Jesus
  id: 2DC83906-F248-11E8-B48F-1D18A9856A87
  last_name: Perez Rodriguez
- first_name: Emmanuel
  full_name: Iarussi, Emmanuel
  id: 33F19F16-F248-11E8-B48F-1D18A9856A87
  last_name: Iarussi
- first_name: Nico
  full_name: Pietroni, Nico
  last_name: Pietroni
- first_name: Eder
  full_name: Miguel, Eder
  last_name: Miguel
- first_name: Paolo
  full_name: Cignoni, Paolo
  last_name: Cignoni
- first_name: Bernd
  full_name: Bickel, Bernd
  id: 49876194-F248-11E8-B48F-1D18A9856A87
  last_name: Bickel
  orcid: 0000-0001-6511-9385
citation:
  ama: 'Malomo L, Perez Rodriguez J, Iarussi E, et al. FlexMaps: Computational design
    of flat flexible shells for shaping 3D objects. <i>ACM Transactions on Graphics</i>.
    2018;37(6). doi:<a href="https://doi.org/10.1145/3272127.3275076">10.1145/3272127.3275076</a>'
  apa: 'Malomo, L., Perez Rodriguez, J., Iarussi, E., Pietroni, N., Miguel, E., Cignoni,
    P., &#38; Bickel, B. (2018). FlexMaps: Computational design of flat flexible shells
    for shaping 3D objects. <i>ACM Transactions on Graphics</i>. Association for Computing
    Machinery (ACM). <a href="https://doi.org/10.1145/3272127.3275076">https://doi.org/10.1145/3272127.3275076</a>'
  chicago: 'Malomo, Luigi, Jesus Perez Rodriguez, Emmanuel Iarussi, Nico Pietroni,
    Eder Miguel, Paolo Cignoni, and Bernd Bickel. “FlexMaps: Computational Design
    of Flat Flexible Shells for Shaping 3D Objects.” <i>ACM Transactions on Graphics</i>.
    Association for Computing Machinery (ACM), 2018. <a href="https://doi.org/10.1145/3272127.3275076">https://doi.org/10.1145/3272127.3275076</a>.'
  ieee: 'L. Malomo <i>et al.</i>, “FlexMaps: Computational design of flat flexible
    shells for shaping 3D objects,” <i>ACM Transactions on Graphics</i>, vol. 37,
    no. 6. Association for Computing Machinery (ACM), 2018.'
  ista: 'Malomo L, Perez Rodriguez J, Iarussi E, Pietroni N, Miguel E, Cignoni P,
    Bickel B. 2018. FlexMaps: Computational design of flat flexible shells for shaping
    3D objects. ACM Transactions on Graphics. 37(6), 241.'
  mla: 'Malomo, Luigi, et al. “FlexMaps: Computational Design of Flat Flexible Shells
    for Shaping 3D Objects.” <i>ACM Transactions on Graphics</i>, vol. 37, no. 6,
    241, Association for Computing Machinery (ACM), 2018, doi:<a href="https://doi.org/10.1145/3272127.3275076">10.1145/3272127.3275076</a>.'
  short: L. Malomo, J. Perez Rodriguez, E. Iarussi, N. Pietroni, E. Miguel, P. Cignoni,
    B. Bickel, ACM Transactions on Graphics 37 (2018).
date_created: 2019-02-13T13:12:53Z
date_published: 2018-11-01T00:00:00Z
date_updated: 2023-09-19T14:25:30Z
day: '01'
ddc:
- '000'
department:
- _id: BeBi
doi: 10.1145/3272127.3275076
ec_funded: 1
external_id:
  isi:
  - '000455953100064'
file:
- access_level: open_access
  checksum: d0529a41c78b37ab8840685579fb33b4
  content_type: application/pdf
  creator: bbickel
  date_created: 2019-09-23T12:48:52Z
  date_updated: 2020-07-14T12:47:14Z
  file_id: '6901'
  file_name: flexmaps_author_version.pdf
  file_size: 100109811
  relation: main_file
file_date_updated: 2020-07-14T12:47:14Z
has_accepted_license: '1'
intvolume: '        37'
isi: 1
issue: '6'
language:
- iso: eng
month: '11'
oa: 1
oa_version: Published Version
project:
- _id: 24F9549A-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '715767'
  name: 'MATERIALIZABLE: Intelligent fabrication-oriented Computational Design and
    Modeling'
- _id: 25082902-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '645599'
  name: Soft-bodied intelligence for Manipulation
- _id: 260C2330-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '754411'
  name: ISTplus - Postdoctoral Fellowships
publication: ACM Transactions on Graphics
publication_identifier:
  issn:
  - 0730-0301
publication_status: published
publisher: Association for Computing Machinery (ACM)
pubrep_id: '1068'
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'FlexMaps: Computational design of flat flexible shells for shaping 3D objects'
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 37
year: '2018'
...
---
_id: '5977'
abstract:
- lang: eng
  text: 'We consider the stochastic shortest path (SSP)problem for succinct Markov
    decision processes(MDPs), where the MDP consists of a set of vari-ables, and a
    set of nondeterministic rules that up-date the variables. First, we show that
    several ex-amples from the AI literature can be modeled assuccinct MDPs.  Then
    we present computationalapproaches for upper and lower bounds for theSSP problem:
    (a) for computing upper bounds, ourmethod is polynomial-time in the implicit descrip-tion
    of the MDP; (b) for lower bounds, we present apolynomial-time (in the size of
    the implicit descrip-tion) reduction to quadratic programming. Our ap-proach is
    applicable even to infinite-state MDPs.Finally, we present experimental results
    to demon-strate the effectiveness of our approach on severalclassical examples
    from the AI literature.'
article_processing_charge: No
arxiv: 1
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Hongfei
  full_name: Fu, Hongfei
  id: 3AAD03D6-F248-11E8-B48F-1D18A9856A87
  last_name: Fu
- first_name: Amir
  full_name: Goharshady, Amir
  id: 391365CE-F248-11E8-B48F-1D18A9856A87
  last_name: Goharshady
  orcid: 0000-0003-1702-6584
- first_name: Nastaran
  full_name: Okati, Nastaran
  last_name: Okati
citation:
  ama: 'Chatterjee K, Fu H, Goharshady AK, Okati N. Computational approaches for stochastic
    shortest path on succinct MDPs. In: <i>Proceedings of the Twenty-Seventh International
    Joint Conference on Artificial Intelligence</i>. Vol 2018. IJCAI; 2018:4700-4707.
    doi:<a href="https://doi.org/10.24963/ijcai.2018/653">10.24963/ijcai.2018/653</a>'
  apa: 'Chatterjee, K., Fu, H., Goharshady, A. K., &#38; Okati, N. (2018). Computational
    approaches for stochastic shortest path on succinct MDPs. In <i>Proceedings of
    the Twenty-Seventh International Joint Conference on Artificial Intelligence</i>
    (Vol. 2018, pp. 4700–4707). Stockholm, Sweden: IJCAI. <a href="https://doi.org/10.24963/ijcai.2018/653">https://doi.org/10.24963/ijcai.2018/653</a>'
  chicago: Chatterjee, Krishnendu, Hongfei Fu, Amir Kafshdar Goharshady, and Nastaran
    Okati. “Computational Approaches for Stochastic Shortest Path on Succinct MDPs.”
    In <i>Proceedings of the Twenty-Seventh International Joint Conference on Artificial
    Intelligence</i>, 2018:4700–4707. IJCAI, 2018. <a href="https://doi.org/10.24963/ijcai.2018/653">https://doi.org/10.24963/ijcai.2018/653</a>.
  ieee: K. Chatterjee, H. Fu, A. K. Goharshady, and N. Okati, “Computational approaches
    for stochastic shortest path on succinct MDPs,” in <i>Proceedings of the Twenty-Seventh
    International Joint Conference on Artificial Intelligence</i>, Stockholm, Sweden,
    2018, vol. 2018, pp. 4700–4707.
  ista: 'Chatterjee K, Fu H, Goharshady AK, Okati N. 2018. Computational approaches
    for stochastic shortest path on succinct MDPs. Proceedings of the Twenty-Seventh
    International Joint Conference on Artificial Intelligence. IJCAI: International
    Joint Conference on Artificial Intelligence vol. 2018, 4700–4707.'
  mla: Chatterjee, Krishnendu, et al. “Computational Approaches for Stochastic Shortest
    Path on Succinct MDPs.” <i>Proceedings of the Twenty-Seventh International Joint
    Conference on Artificial Intelligence</i>, vol. 2018, IJCAI, 2018, pp. 4700–07,
    doi:<a href="https://doi.org/10.24963/ijcai.2018/653">10.24963/ijcai.2018/653</a>.
  short: K. Chatterjee, H. Fu, A.K. Goharshady, N. Okati, in:, Proceedings of the
    Twenty-Seventh International Joint Conference on Artificial Intelligence, IJCAI,
    2018, pp. 4700–4707.
conference:
  end_date: 2018-07-19
  location: Stockholm, Sweden
  name: 'IJCAI: International Joint Conference on Artificial Intelligence'
  start_date: 2018-07-13
date_created: 2019-02-13T13:26:27Z
date_published: 2018-07-17T00:00:00Z
date_updated: 2025-06-02T08:53:44Z
day: '17'
department:
- _id: KrCh
doi: 10.24963/ijcai.2018/653
ec_funded: 1
external_id:
  arxiv:
  - '1804.08984'
  isi:
  - '000764175404118'
intvolume: '      2018'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1804.08984
month: '07'
oa: 1
oa_version: Preprint
page: 4700-4707
project:
- _id: 25892FC0-B435-11E9-9278-68D0E5697425
  grant_number: ICT15-003
  name: Efficient Algorithms for Computer Aided Verification
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S 11407_N23
  name: Rigorous Systems Engineering
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
publication: Proceedings of the Twenty-Seventh International Joint Conference on Artificial
  Intelligence
publication_identifier:
  isbn:
  - 978-099924112-7
  issn:
  - '10450823'
publication_status: published
publisher: IJCAI
quality_controlled: '1'
related_material:
  record:
  - id: '8934'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Computational approaches for stochastic shortest path on succinct MDPs
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 2018
year: '2018'
...
---
_id: '5978'
abstract:
- lang: eng
  text: 'We consider the MAP-inference problem for graphical models,which is a valued
    constraint satisfaction problem defined onreal numbers with a natural summation
    operation. We proposea family of relaxations (different from the famous Sherali-Adams
    hierarchy), which naturally define lower bounds for itsoptimum. This family always
    contains a tight relaxation andwe give an algorithm able to find it and therefore,
    solve theinitial non-relaxed NP-hard problem.The relaxations we consider decompose
    the original probleminto two non-overlapping parts: an easy LP-tight part and
    adifficult one. For the latter part a combinatorial solver must beused. As we
    show in our experiments, in a number of applica-tions the second, difficult part
    constitutes only a small fractionof the whole problem. This property allows to
    significantlyreduce the computational time of the combinatorial solver andtherefore
    solve problems which were out of reach before.'
article_processing_charge: No
arxiv: 1
author:
- first_name: Stefan
  full_name: Haller, Stefan
  last_name: Haller
- first_name: Paul
  full_name: Swoboda, Paul
  id: 446560C6-F248-11E8-B48F-1D18A9856A87
  last_name: Swoboda
- first_name: Bogdan
  full_name: Savchynskyy, Bogdan
  last_name: Savchynskyy
citation:
  ama: 'Haller S, Swoboda P, Savchynskyy B. Exact MAP-inference by confining combinatorial
    search with LP relaxation. In: <i>Proceedings of the 32st AAAI Conference on Artificial
    Intelligence</i>. AAAI Press; 2018:6581-6588.'
  apa: 'Haller, S., Swoboda, P., &#38; Savchynskyy, B. (2018). Exact MAP-inference
    by confining combinatorial search with LP relaxation. In <i>Proceedings of the
    32st AAAI Conference on Artificial Intelligence</i> (pp. 6581–6588). New Orleans,
    LU, United States: AAAI Press.'
  chicago: Haller, Stefan, Paul Swoboda, and Bogdan Savchynskyy. “Exact MAP-Inference
    by Confining Combinatorial Search with LP Relaxation.” In <i>Proceedings of the
    32st AAAI Conference on Artificial Intelligence</i>, 6581–88. AAAI Press, 2018.
  ieee: S. Haller, P. Swoboda, and B. Savchynskyy, “Exact MAP-inference by confining
    combinatorial search with LP relaxation,” in <i>Proceedings of the 32st AAAI Conference
    on Artificial Intelligence</i>, New Orleans, LU, United States, 2018, pp. 6581–6588.
  ista: 'Haller S, Swoboda P, Savchynskyy B. 2018. Exact MAP-inference by confining
    combinatorial search with LP relaxation. Proceedings of the 32st AAAI Conference
    on Artificial Intelligence. AAAI: Conference on Artificial Intelligence, 6581–6588.'
  mla: Haller, Stefan, et al. “Exact MAP-Inference by Confining Combinatorial Search
    with LP Relaxation.” <i>Proceedings of the 32st AAAI Conference on Artificial
    Intelligence</i>, AAAI Press, 2018, pp. 6581–88.
  short: S. Haller, P. Swoboda, B. Savchynskyy, in:, Proceedings of the 32st AAAI
    Conference on Artificial Intelligence, AAAI Press, 2018, pp. 6581–6588.
conference:
  end_date: 2018-02-07
  location: New Orleans, LU, United States
  name: 'AAAI: Conference on Artificial Intelligence'
  start_date: 2018-02-02
date_created: 2019-02-13T13:32:48Z
date_published: 2018-02-01T00:00:00Z
date_updated: 2023-09-19T14:26:52Z
day: '01'
department:
- _id: VlKo
external_id:
  arxiv:
  - '2004.06370'
  isi:
  - '000485488906082'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2004.06370
month: '02'
oa: 1
oa_version: Preprint
page: 6581-6588
publication: Proceedings of the 32st AAAI Conference on Artificial Intelligence
publication_status: published
publisher: AAAI Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Exact MAP-inference by confining combinatorial search with LP relaxation
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
year: '2018'
...
---
_id: '5980'
abstract:
- lang: eng
  text: The problem of private set-intersection (PSI) has been traditionally treated
    as an instance of the more general problem of multi-party computation (MPC). Consequently,
    in order to argue security, or compose these protocols one has to rely on the
    general theory that was developed for the purpose of MPC. The pursuit of efficient
    protocols, however, has resulted in designs that exploit properties pertaining
    to PSI. In almost all practical applications where a PSI protocol is deployed,
    it is expected to be executed multiple times, possibly on related inputs. In this
    work we initiate a dedicated study of PSI in the multi-interaction (MI) setting.
    In this model a server sets up the common system parameters and executes set-intersection
    multiple times with potentially different clients. We discuss a few attacks that
    arise when protocols are naïvely composed in this manner and, accordingly, craft
    security definitions for the MI setting and study their inter-relation. Finally,
    we suggest a set of protocols that are MI-secure, at the same time almost as efficient
    as their parent, stand-alone, protocols.
article_processing_charge: No
author:
- first_name: Sanjit
  full_name: Chatterjee, Sanjit
  last_name: Chatterjee
- first_name: Chethan
  full_name: Kamath Hosdurg, Chethan
  id: 4BD3F30E-F248-11E8-B48F-1D18A9856A87
  last_name: Kamath Hosdurg
- first_name: Vikas
  full_name: Kumar, Vikas
  last_name: Kumar
citation:
  ama: Chatterjee S, Kamath Hosdurg C, Kumar V. Private set-intersection with common
    set-up. <i>American Institute of Mathematical Sciences</i>. 2018;12(1):17-47.
    doi:<a href="https://doi.org/10.3934/amc.2018002">10.3934/amc.2018002</a>
  apa: Chatterjee, S., Kamath Hosdurg, C., &#38; Kumar, V. (2018). Private set-intersection
    with common set-up. <i>American Institute of Mathematical Sciences</i>. AIMS.
    <a href="https://doi.org/10.3934/amc.2018002">https://doi.org/10.3934/amc.2018002</a>
  chicago: Chatterjee, Sanjit, Chethan Kamath Hosdurg, and Vikas Kumar. “Private Set-Intersection
    with Common Set-Up.” <i>American Institute of Mathematical Sciences</i>. AIMS,
    2018. <a href="https://doi.org/10.3934/amc.2018002">https://doi.org/10.3934/amc.2018002</a>.
  ieee: S. Chatterjee, C. Kamath Hosdurg, and V. Kumar, “Private set-intersection
    with common set-up,” <i>American Institute of Mathematical Sciences</i>, vol.
    12, no. 1. AIMS, pp. 17–47, 2018.
  ista: Chatterjee S, Kamath Hosdurg C, Kumar V. 2018. Private set-intersection with
    common set-up. American Institute of Mathematical Sciences. 12(1), 17–47.
  mla: Chatterjee, Sanjit, et al. “Private Set-Intersection with Common Set-Up.” <i>American
    Institute of Mathematical Sciences</i>, vol. 12, no. 1, AIMS, 2018, pp. 17–47,
    doi:<a href="https://doi.org/10.3934/amc.2018002">10.3934/amc.2018002</a>.
  short: S. Chatterjee, C. Kamath Hosdurg, V. Kumar, American Institute of Mathematical
    Sciences 12 (2018) 17–47.
date_created: 2019-02-13T13:49:41Z
date_published: 2018-02-01T00:00:00Z
date_updated: 2023-09-19T14:27:59Z
day: '01'
department:
- _id: KrPi
doi: 10.3934/amc.2018002
external_id:
  isi:
  - '000430950400002'
intvolume: '        12'
isi: 1
issue: '1'
language:
- iso: eng
month: '02'
oa_version: None
page: 17-47
publication: American Institute of Mathematical Sciences
publication_status: published
publisher: AIMS
quality_controlled: '1'
scopus_import: '1'
status: public
title: Private set-intersection with common set-up
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 12
year: '2018'
...
---
_id: '5982'
abstract:
- lang: eng
  text: In the present work, we detail a fast and simple solution-based method to
    synthesize hexagonal SnSe2 nanoplates (NPLs) and their use to produce crystallographically
    textured SnSe2 nanomaterials. We also demonstrate that the same strategy can be
    used to produce orthorhombic SnSe nanostructures and nanomaterials. NPLs are grown
    through a screw dislocation-driven mechanism. This mechanism typically results
    in pyramidal structures, but we demonstrate here that the growth from multiple
    dislocations results in flower-like structures. Crystallographically textured
    SnSe2 bulk nanomaterials obtained from the hot pressing of these SnSe2 structures
    display highly anisotropic charge and heat transport properties and thermoelectric
    (TE) figures of merit limited by relatively low electrical conductivities. To
    improve this parameter, SnSe2 NPLs are blended here with metal nanoparticles.
    The electrical conductivities of the blends are significantly improved with respect
    to bare SnSe2 NPLs, what translates into a three-fold increase of the TE Figure
    of merit, reaching unprecedented ZT values up to 0.65.
article_processing_charge: No
article_type: original
author:
- first_name: Yu
  full_name: Zhang, Yu
  last_name: Zhang
- first_name: Yu
  full_name: Liu, Yu
  last_name: Liu
- first_name: Khak Ho
  full_name: Lim, Khak Ho
  last_name: Lim
- first_name: Congcong
  full_name: Xing, Congcong
  last_name: Xing
- first_name: Mengyao
  full_name: Li, Mengyao
  last_name: Li
- first_name: Ting
  full_name: Zhang, Ting
  last_name: Zhang
- first_name: Pengyi
  full_name: Tang, Pengyi
  last_name: Tang
- first_name: Jordi
  full_name: Arbiol, Jordi
  last_name: Arbiol
- first_name: Jordi
  full_name: Llorca, Jordi
  last_name: Llorca
- first_name: Ka Ming
  full_name: Ng, Ka Ming
  last_name: Ng
- first_name: Maria
  full_name: Ibáñez, Maria
  id: 43C61214-F248-11E8-B48F-1D18A9856A87
  last_name: Ibáñez
  orcid: 0000-0001-5013-2843
- first_name: Pablo
  full_name: Guardia, Pablo
  last_name: Guardia
- first_name: Mirko
  full_name: Prato, Mirko
  last_name: Prato
- first_name: Doris
  full_name: Cadavid, Doris
  last_name: Cadavid
- first_name: Andreu
  full_name: Cabot, Andreu
  last_name: Cabot
citation:
  ama: Zhang Y, Liu Y, Lim KH, et al. Tin diselenide molecular precursor for solution-processable
    thermoelectric materials. <i>Angewandte Chemie International Edition</i>. 2018;57(52):17063-17068.
    doi:<a href="https://doi.org/10.1002/anie.201809847">10.1002/anie.201809847</a>
  apa: Zhang, Y., Liu, Y., Lim, K. H., Xing, C., Li, M., Zhang, T., … Cabot, A. (2018).
    Tin diselenide molecular precursor for solution-processable thermoelectric materials.
    <i>Angewandte Chemie International Edition</i>. Wiley. <a href="https://doi.org/10.1002/anie.201809847">https://doi.org/10.1002/anie.201809847</a>
  chicago: Zhang, Yu, Yu Liu, Khak Ho Lim, Congcong Xing, Mengyao Li, Ting Zhang,
    Pengyi Tang, et al. “Tin Diselenide Molecular Precursor for Solution-Processable
    Thermoelectric Materials.” <i>Angewandte Chemie International Edition</i>. Wiley,
    2018. <a href="https://doi.org/10.1002/anie.201809847">https://doi.org/10.1002/anie.201809847</a>.
  ieee: Y. Zhang <i>et al.</i>, “Tin diselenide molecular precursor for solution-processable
    thermoelectric materials,” <i>Angewandte Chemie International Edition</i>, vol.
    57, no. 52. Wiley, pp. 17063–17068, 2018.
  ista: Zhang Y, Liu Y, Lim KH, Xing C, Li M, Zhang T, Tang P, Arbiol J, Llorca J,
    Ng KM, Ibáñez M, Guardia P, Prato M, Cadavid D, Cabot A. 2018. Tin diselenide
    molecular precursor for solution-processable thermoelectric materials. Angewandte
    Chemie International Edition. 57(52), 17063–17068.
  mla: Zhang, Yu, et al. “Tin Diselenide Molecular Precursor for Solution-Processable
    Thermoelectric Materials.” <i>Angewandte Chemie International Edition</i>, vol.
    57, no. 52, Wiley, 2018, pp. 17063–68, doi:<a href="https://doi.org/10.1002/anie.201809847">10.1002/anie.201809847</a>.
  short: Y. Zhang, Y. Liu, K.H. Lim, C. Xing, M. Li, T. Zhang, P. Tang, J. Arbiol,
    J. Llorca, K.M. Ng, M. Ibáñez, P. Guardia, M. Prato, D. Cadavid, A. Cabot, Angewandte
    Chemie International Edition 57 (2018) 17063–17068.
date_created: 2019-02-14T10:23:27Z
date_published: 2018-12-21T00:00:00Z
date_updated: 2023-09-19T14:28:31Z
day: '21'
department:
- _id: MaIb
doi: 10.1002/anie.201809847
external_id:
  isi:
  - '000454575500020'
intvolume: '        57'
isi: 1
issue: '52'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://upcommons.upc.edu/bitstream/2117/130444/1/Zhang%20preprint.pdf
month: '12'
oa: 1
oa_version: Submitted Version
page: 17063-17068
publication: Angewandte Chemie International Edition
publication_identifier:
  issn:
  - 1433-7851
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: Tin diselenide molecular precursor for solution-processable thermoelectric
  materials
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 57
year: '2018'
...
---
_id: '5983'
abstract:
- lang: eng
  text: We study a quantum impurity possessing both translational and internal rotational
    degrees of freedom interacting with a bosonic bath. Such a system corresponds
    to a “rotating polaron,” which can be used to model, e.g., a rotating molecule
    immersed in an ultracold Bose gas or superfluid helium. We derive the Hamiltonian
    of the rotating polaron and study its spectrum in the weak- and strong-coupling
    regimes using a combination of variational, diagrammatic, and mean-field approaches.
    We reveal how the coupling between linear and angular momenta affects stable quasiparticle
    states, and demonstrate that internal rotation leads to an enhanced self-localization
    in the translational degrees of freedom.
article_number: '224506'
article_processing_charge: No
arxiv: 1
author:
- first_name: Enderalp
  full_name: Yakaboylu, Enderalp
  id: 38CB71F6-F248-11E8-B48F-1D18A9856A87
  last_name: Yakaboylu
  orcid: 0000-0001-5973-0874
- first_name: Bikashkali
  full_name: Midya, Bikashkali
  id: 456187FC-F248-11E8-B48F-1D18A9856A87
  last_name: Midya
- first_name: Andreas
  full_name: Deuchert, Andreas
  id: 4DA65CD0-F248-11E8-B48F-1D18A9856A87
  last_name: Deuchert
  orcid: 0000-0003-3146-6746
- first_name: Nikolai K
  full_name: Leopold, Nikolai K
  id: 4BC40BEC-F248-11E8-B48F-1D18A9856A87
  last_name: Leopold
  orcid: 0000-0002-0495-6822
- first_name: Mikhail
  full_name: Lemeshko, Mikhail
  id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
  last_name: Lemeshko
  orcid: 0000-0002-6990-7802
citation:
  ama: 'Yakaboylu E, Midya B, Deuchert A, Leopold NK, Lemeshko M. Theory of the rotating
    polaron: Spectrum and self-localization. <i>Physical Review B</i>. 2018;98(22).
    doi:<a href="https://doi.org/10.1103/physrevb.98.224506">10.1103/physrevb.98.224506</a>'
  apa: 'Yakaboylu, E., Midya, B., Deuchert, A., Leopold, N. K., &#38; Lemeshko, M.
    (2018). Theory of the rotating polaron: Spectrum and self-localization. <i>Physical
    Review B</i>. American Physical Society. <a href="https://doi.org/10.1103/physrevb.98.224506">https://doi.org/10.1103/physrevb.98.224506</a>'
  chicago: 'Yakaboylu, Enderalp, Bikashkali Midya, Andreas Deuchert, Nikolai K Leopold,
    and Mikhail Lemeshko. “Theory of the Rotating Polaron: Spectrum and Self-Localization.”
    <i>Physical Review B</i>. American Physical Society, 2018. <a href="https://doi.org/10.1103/physrevb.98.224506">https://doi.org/10.1103/physrevb.98.224506</a>.'
  ieee: 'E. Yakaboylu, B. Midya, A. Deuchert, N. K. Leopold, and M. Lemeshko, “Theory
    of the rotating polaron: Spectrum and self-localization,” <i>Physical Review B</i>,
    vol. 98, no. 22. American Physical Society, 2018.'
  ista: 'Yakaboylu E, Midya B, Deuchert A, Leopold NK, Lemeshko M. 2018. Theory of
    the rotating polaron: Spectrum and self-localization. Physical Review B. 98(22),
    224506.'
  mla: 'Yakaboylu, Enderalp, et al. “Theory of the Rotating Polaron: Spectrum and
    Self-Localization.” <i>Physical Review B</i>, vol. 98, no. 22, 224506, American
    Physical Society, 2018, doi:<a href="https://doi.org/10.1103/physrevb.98.224506">10.1103/physrevb.98.224506</a>.'
  short: E. Yakaboylu, B. Midya, A. Deuchert, N.K. Leopold, M. Lemeshko, Physical
    Review B 98 (2018).
date_created: 2019-02-14T10:37:09Z
date_published: 2018-12-12T00:00:00Z
date_updated: 2023-09-19T14:29:03Z
day: '12'
department:
- _id: MiLe
- _id: RoSe
doi: 10.1103/physrevb.98.224506
ec_funded: 1
external_id:
  arxiv:
  - '1809.01204'
  isi:
  - '000452992700008'
intvolume: '        98'
isi: 1
issue: '22'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1809.01204
month: '12'
oa: 1
oa_version: Preprint
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
- _id: 25C6DC12-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '694227'
  name: Analysis of quantum many-body systems
publication: Physical Review B
publication_identifier:
  eissn:
  - 2469-9969
  issn:
  - 2469-9950
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Theory of the rotating polaron: Spectrum and self-localization'
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 98
year: '2018'
...
---
_id: '5984'
abstract:
- lang: eng
  text: G-protein-coupled receptors (GPCRs) form the largest receptor family, relay
    environmental stimuli to changes in cell behavior and represent prime drug targets.
    Many GPCRs are classified as orphan receptors because of the limited knowledge
    on their ligands and coupling to cellular signaling machineries. Here, we engineer
    a library of 63 chimeric receptors that contain the signaling domains of human
    orphan and understudied GPCRs functionally linked to the light-sensing domain
    of rhodopsin. Upon stimulation with visible light, we identify activation of canonical
    cell signaling pathways, including cAMP-, Ca2+-, MAPK/ERK-, and Rho-dependent
    pathways, downstream of the engineered receptors. For the human pseudogene GPR33,
    we resurrect a signaling function that supports its hypothesized role as a pathogen
    entry site. These results demonstrate that substituting unknown chemical activators
    with a light switch can reveal information about protein function and provide
    an optically controlled protein library for exploring the physiology and therapeutic
    potential of understudied GPCRs.
article_number: '1950'
article_processing_charge: No
author:
- first_name: Maurizio
  full_name: Morri, Maurizio
  id: 4863116E-F248-11E8-B48F-1D18A9856A87
  last_name: Morri
- first_name: Inmaculada
  full_name: Sanchez-Romero, Inmaculada
  id: 3D9C5D30-F248-11E8-B48F-1D18A9856A87
  last_name: Sanchez-Romero
- first_name: Alexandra-Madelaine
  full_name: Tichy, Alexandra-Madelaine
  id: 29D8BB2C-F248-11E8-B48F-1D18A9856A87
  last_name: Tichy
- first_name: Stephanie
  full_name: Kainrath, Stephanie
  id: 32CFBA64-F248-11E8-B48F-1D18A9856A87
  last_name: Kainrath
- first_name: Elliot J.
  full_name: Gerrard, Elliot J.
  last_name: Gerrard
- first_name: Priscila
  full_name: Hirschfeld, Priscila
  id: 435ACB3A-F248-11E8-B48F-1D18A9856A87
  last_name: Hirschfeld
- first_name: Jan
  full_name: Schwarz, Jan
  id: 346C1EC6-F248-11E8-B48F-1D18A9856A87
  last_name: Schwarz
- first_name: Harald L
  full_name: Janovjak, Harald L
  id: 33BA6C30-F248-11E8-B48F-1D18A9856A87
  last_name: Janovjak
  orcid: 0000-0002-8023-9315
citation:
  ama: Morri M, Sanchez-Romero I, Tichy A-M, et al. Optical functionalization of human
    class A orphan G-protein-coupled receptors. <i>Nature Communications</i>. 2018;9(1).
    doi:<a href="https://doi.org/10.1038/s41467-018-04342-1">10.1038/s41467-018-04342-1</a>
  apa: Morri, M., Sanchez-Romero, I., Tichy, A.-M., Kainrath, S., Gerrard, E. J.,
    Hirschfeld, P., … Janovjak, H. L. (2018). Optical functionalization of human class
    A orphan G-protein-coupled receptors. <i>Nature Communications</i>. Springer Nature.
    <a href="https://doi.org/10.1038/s41467-018-04342-1">https://doi.org/10.1038/s41467-018-04342-1</a>
  chicago: Morri, Maurizio, Inmaculada Sanchez-Romero, Alexandra-Madelaine Tichy,
    Stephanie Kainrath, Elliot J. Gerrard, Priscila Hirschfeld, Jan Schwarz, and Harald
    L Janovjak. “Optical Functionalization of Human Class A Orphan G-Protein-Coupled
    Receptors.” <i>Nature Communications</i>. Springer Nature, 2018. <a href="https://doi.org/10.1038/s41467-018-04342-1">https://doi.org/10.1038/s41467-018-04342-1</a>.
  ieee: M. Morri <i>et al.</i>, “Optical functionalization of human class A orphan
    G-protein-coupled receptors,” <i>Nature Communications</i>, vol. 9, no. 1. Springer
    Nature, 2018.
  ista: Morri M, Sanchez-Romero I, Tichy A-M, Kainrath S, Gerrard EJ, Hirschfeld P,
    Schwarz J, Janovjak HL. 2018. Optical functionalization of human class A orphan
    G-protein-coupled receptors. Nature Communications. 9(1), 1950.
  mla: Morri, Maurizio, et al. “Optical Functionalization of Human Class A Orphan
    G-Protein-Coupled Receptors.” <i>Nature Communications</i>, vol. 9, no. 1, 1950,
    Springer Nature, 2018, doi:<a href="https://doi.org/10.1038/s41467-018-04342-1">10.1038/s41467-018-04342-1</a>.
  short: M. Morri, I. Sanchez-Romero, A.-M. Tichy, S. Kainrath, E.J. Gerrard, P. Hirschfeld,
    J. Schwarz, H.L. Janovjak, Nature Communications 9 (2018).
date_created: 2019-02-14T10:50:24Z
date_published: 2018-12-01T00:00:00Z
date_updated: 2023-09-19T14:29:32Z
day: '01'
ddc:
- '570'
department:
- _id: HaJa
- _id: CaGu
- _id: MiSi
doi: 10.1038/s41467-018-04342-1
ec_funded: 1
external_id:
  isi:
  - '000432280000006'
file:
- access_level: open_access
  checksum: 8325fcc194264af4749e662a73bf66b5
  content_type: application/pdf
  creator: kschuh
  date_created: 2019-02-14T10:58:29Z
  date_updated: 2020-07-14T12:47:14Z
  file_id: '5985'
  file_name: 2018_Springer_Morri.pdf
  file_size: 1349914
  relation: main_file
file_date_updated: 2020-07-14T12:47:14Z
has_accepted_license: '1'
intvolume: '         9'
isi: 1
issue: '1'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
project:
- _id: 25548C20-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '303564'
  name: Microbial Ion Channels for Synthetic Neurobiology
- _id: 255A6082-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: W1232-B24
  name: Molecular Drug Targets
publication: Nature Communications
publication_identifier:
  issn:
  - 2041-1723
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Optical functionalization of human class A orphan G-protein-coupled receptors
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 9
year: '2018'
...
---
_id: '5989'
abstract:
- lang: eng
  text: Schistosomes are the causative agents of schistosomiasis, a neglected tropical
    disease affecting over 230 million people worldwide.Additionally to their major
    impact on human health, they are also models of choice in evolutionary biology.
    These parasitic flatwormsare unique among the common hermaphroditic trematodes
    as they have separate sexes. This so-called “evolutionary scandal”displays a female
    heterogametic genetic sex-determination system (ZZ males and ZW females), as well
    as a pronounced adult sexualdimorphism. These phenotypic differences are determined
    by a shared set of genes in both sexes, potentially leading to intralocussexual
    conflicts. To resolve these conflicts in sexually selected traits, molecular mechanisms
    such as sex-biased gene expression couldoccur, but parent-of-origin gene expression
    also provides an alternative. In this work we investigated the latter mechanism,
    that is,genes expressed preferentially from either the maternal or the paternal
    allele, inSchistosoma mansonispecies. To this end, tran-scriptomes from male and
    female hybrid adults obtained by strain crosses were sequenced. Strain-specific
    single nucleotide poly-morphism (SNP) markers allowed us to discriminate the parental
    origin, while reciprocal crosses helped to differentiate parentalexpression from
    strain-specific expression. We identified genes containing SNPs expressed in a
    parent-of-origin manner consistentwith paternal and maternal imprints. Although
    the majority of the SNPs was identified in mitochondrial and Z-specific loci,
    theremaining SNPs found in male and female transcriptomes were situated in genes
    that have the potential to explain sexual differencesin schistosome parasites.
    Furthermore, we identified and validated four new Z-specific scaffolds.
article_processing_charge: No
author:
- first_name: Julien
  full_name: Kincaid-Smith, Julien
  last_name: Kincaid-Smith
- first_name: Marion A L
  full_name: Picard, Marion A L
  id: 2C921A7A-F248-11E8-B48F-1D18A9856A87
  last_name: Picard
  orcid: 0000-0002-8101-2518
- first_name: Céline
  full_name: Cosseau, Céline
  last_name: Cosseau
- first_name: Jérôme
  full_name: Boissier, Jérôme
  last_name: Boissier
- first_name: Dany
  full_name: Severac, Dany
  last_name: Severac
- first_name: Christoph
  full_name: Grunau, Christoph
  last_name: Grunau
- first_name: Eve
  full_name: Toulza, Eve
  last_name: Toulza
citation:
  ama: Kincaid-Smith J, Picard MAL, Cosseau C, et al. Parent-of-Origin-Dependent Gene
    Expression in Male and Female Schistosome Parasites. <i>Genome Biology and Evolution</i>.
    2018;10(3):840-856. doi:<a href="https://doi.org/10.1093/gbe/evy037">10.1093/gbe/evy037</a>
  apa: Kincaid-Smith, J., Picard, M. A. L., Cosseau, C., Boissier, J., Severac, D.,
    Grunau, C., &#38; Toulza, E. (2018). Parent-of-Origin-Dependent Gene Expression
    in Male and Female Schistosome Parasites. <i>Genome Biology and Evolution</i>.
    Oxford University Press. <a href="https://doi.org/10.1093/gbe/evy037">https://doi.org/10.1093/gbe/evy037</a>
  chicago: Kincaid-Smith, Julien, Marion A L Picard, Céline Cosseau, Jérôme Boissier,
    Dany Severac, Christoph Grunau, and Eve Toulza. “Parent-of-Origin-Dependent Gene
    Expression in Male and Female Schistosome Parasites.” <i>Genome Biology and Evolution</i>.
    Oxford University Press, 2018. <a href="https://doi.org/10.1093/gbe/evy037">https://doi.org/10.1093/gbe/evy037</a>.
  ieee: J. Kincaid-Smith <i>et al.</i>, “Parent-of-Origin-Dependent Gene Expression
    in Male and Female Schistosome Parasites,” <i>Genome Biology and Evolution</i>,
    vol. 10, no. 3. Oxford University Press, pp. 840–856, 2018.
  ista: Kincaid-Smith J, Picard MAL, Cosseau C, Boissier J, Severac D, Grunau C, Toulza
    E. 2018. Parent-of-Origin-Dependent Gene Expression in Male and Female Schistosome
    Parasites. Genome Biology and Evolution. 10(3), 840–856.
  mla: Kincaid-Smith, Julien, et al. “Parent-of-Origin-Dependent Gene Expression in
    Male and Female Schistosome Parasites.” <i>Genome Biology and Evolution</i>, vol.
    10, no. 3, Oxford University Press, 2018, pp. 840–56, doi:<a href="https://doi.org/10.1093/gbe/evy037">10.1093/gbe/evy037</a>.
  short: J. Kincaid-Smith, M.A.L. Picard, C. Cosseau, J. Boissier, D. Severac, C.
    Grunau, E. Toulza, Genome Biology and Evolution 10 (2018) 840–856.
date_created: 2019-02-14T12:13:52Z
date_published: 2018-03-01T00:00:00Z
date_updated: 2023-09-19T14:39:08Z
day: '01'
ddc:
- '570'
department:
- _id: BeVi
doi: 10.1093/gbe/evy037
external_id:
  isi:
  - '000429483700013'
file:
- access_level: open_access
  checksum: 736a459cb77de5824354466bb0331caf
  content_type: application/pdf
  creator: dernst
  date_created: 2019-02-14T12:20:01Z
  date_updated: 2020-07-14T12:47:15Z
  file_id: '5991'
  file_name: 2018_GBE_Kincaid_Smith.pdf
  file_size: 529755
  relation: main_file
file_date_updated: 2020-07-14T12:47:15Z
has_accepted_license: '1'
intvolume: '        10'
isi: 1
issue: '3'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc/4.0/
month: '03'
oa: 1
oa_version: Published Version
page: 840-856
publication: Genome Biology and Evolution
publication_identifier:
  issn:
  - 1759-6653
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Parent-of-Origin-Dependent Gene Expression in Male and Female Schistosome Parasites
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
  short: CC BY-NC (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 10
year: '2018'
...
