[{"project":[{"grant_number":"754411","name":"ISTplus - Postdoctoral Fellowships","call_identifier":"H2020","_id":"260C2330-B435-11E9-9278-68D0E5697425"}],"status":"public","publication":"Journal of Fluid Mechanics","acknowledgement":"We thank Y. Duguet, S. Gomé, G. Lemoult, T. Liu, B. Semin and L.S. Tuckerman for\r\nfruitful discussions. \r\nThis work was supported by a grant, TRANSFLOW, provided by the Agence Nationale de\r\nla Recherche (ANR). A.M.P. was partially supported by the French Embassy in Russia (I.I. Mechnikov scholarship) and by the Russian Science Foundation (project no. 18-79-00189). L.K. was partially supported by the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement no. 754411.","date_published":"2021-02-15T00:00:00Z","ec_funded":1,"external_id":{"isi":["000618034400001"]},"isi":1,"year":"2021","ddc":["530"],"quality_controlled":"1","publisher":"Cambridge University Press","doi":"10.1017/jfm.2020.1089","article_processing_charge":"Yes (via OA deal)","type":"journal_article","date_updated":"2023-08-07T13:55:40Z","_id":"9207","language":[{"iso":"eng"}],"oa":1,"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","citation":{"ista":"Klotz L, Pavlenko AM, Wesfreid JE. 2021. Experimental measurements in plane Couette-Poiseuille flow: Dynamics of the large- and small-scale flow. Journal of Fluid Mechanics. 912, A24.","chicago":"Klotz, Lukasz, A. M. Pavlenko, and J. E. Wesfreid. “Experimental Measurements in Plane Couette-Poiseuille Flow: Dynamics of the Large- and Small-Scale Flow.” <i>Journal of Fluid Mechanics</i>. Cambridge University Press, 2021. <a href=\"https://doi.org/10.1017/jfm.2020.1089\">https://doi.org/10.1017/jfm.2020.1089</a>.","apa":"Klotz, L., Pavlenko, A. M., &#38; Wesfreid, J. E. (2021). Experimental measurements in plane Couette-Poiseuille flow: Dynamics of the large- and small-scale flow. <i>Journal of Fluid Mechanics</i>. Cambridge University Press. <a href=\"https://doi.org/10.1017/jfm.2020.1089\">https://doi.org/10.1017/jfm.2020.1089</a>","mla":"Klotz, Lukasz, et al. “Experimental Measurements in Plane Couette-Poiseuille Flow: Dynamics of the Large- and Small-Scale Flow.” <i>Journal of Fluid Mechanics</i>, vol. 912, A24, Cambridge University Press, 2021, doi:<a href=\"https://doi.org/10.1017/jfm.2020.1089\">10.1017/jfm.2020.1089</a>.","ama":"Klotz L, Pavlenko AM, Wesfreid JE. Experimental measurements in plane Couette-Poiseuille flow: Dynamics of the large- and small-scale flow. <i>Journal of Fluid Mechanics</i>. 2021;912. doi:<a href=\"https://doi.org/10.1017/jfm.2020.1089\">10.1017/jfm.2020.1089</a>","ieee":"L. Klotz, A. M. Pavlenko, and J. E. Wesfreid, “Experimental measurements in plane Couette-Poiseuille flow: Dynamics of the large- and small-scale flow,” <i>Journal of Fluid Mechanics</i>, vol. 912. Cambridge University Press, 2021.","short":"L. Klotz, A.M. Pavlenko, J.E. Wesfreid, Journal of Fluid Mechanics 912 (2021)."},"month":"02","file":[{"checksum":"b8020d6338667673e34fde0608913dd2","relation":"main_file","access_level":"open_access","content_type":"application/pdf","success":1,"file_name":"2021_JourFluidMechanics_Klotz.pdf","file_id":"9220","creator":"dernst","date_updated":"2021-03-03T09:49:34Z","date_created":"2021-03-03T09:49:34Z","file_size":4124471}],"article_number":"A24","department":[{"_id":"BjHo"}],"intvolume":"       912","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"abstract":[{"text":"In this paper we experimentally study the transitional range of Reynolds numbers in\r\nplane Couette–Poiseuille flow, focusing our attention on the localized turbulent structures\r\ntriggered by a strong impulsive jet and the large-scale flow generated around these\r\nstructures. We present a detailed investigation of the large-scale flow and show how\r\nits amplitude depends on Reynolds number and amplitude perturbation. In addition,\r\nwe characterize the initial dynamics of the localized turbulent spot, which includes the\r\ncoupling between the small and large scales, as well as the dependence of the advection\r\nspeed on the large-scale flow generated around the spot. Finally, we provide the first\r\nexperimental measurements of the large-scale flow around an oblique turbulent band.","lang":"eng"}],"has_accepted_license":"1","publication_identifier":{"eissn":["1469-7645"],"issn":["0022-1120"]},"publication_status":"published","file_date_updated":"2021-03-03T09:49:34Z","title":"Experimental measurements in plane Couette-Poiseuille flow: Dynamics of the large- and small-scale flow","oa_version":"Published Version","author":[{"id":"2C9AF1C2-F248-11E8-B48F-1D18A9856A87","full_name":"Klotz, Lukasz","last_name":"Klotz","orcid":"0000-0003-1740-7635","first_name":"Lukasz"},{"full_name":"Pavlenko, A. M.","last_name":"Pavlenko","first_name":"A. M."},{"first_name":"J. E.","last_name":"Wesfreid","full_name":"Wesfreid, J. E."}],"day":"15","scopus_import":"1","article_type":"original","date_created":"2021-02-28T23:01:25Z","volume":912},{"language":[{"iso":"eng"}],"oa":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"ieee":"V. Volhejn and C. Lampert, “Does SGD implicitly optimize for smoothness?,” in <i>42nd German Conference on Pattern Recognition</i>, Tübingen, Germany, 2021, vol. 12544, pp. 246–259.","short":"V. Volhejn, C. Lampert, in:, 42nd German Conference on Pattern Recognition, Springer, 2021, pp. 246–259.","ama":"Volhejn V, Lampert C. Does SGD implicitly optimize for smoothness? In: <i>42nd German Conference on Pattern Recognition</i>. Vol 12544. LNCS. Springer; 2021:246-259. doi:<a href=\"https://doi.org/10.1007/978-3-030-71278-5_18\">10.1007/978-3-030-71278-5_18</a>","apa":"Volhejn, V., &#38; Lampert, C. (2021). Does SGD implicitly optimize for smoothness? In <i>42nd German Conference on Pattern Recognition</i> (Vol. 12544, pp. 246–259). Tübingen, Germany: Springer. <a href=\"https://doi.org/10.1007/978-3-030-71278-5_18\">https://doi.org/10.1007/978-3-030-71278-5_18</a>","mla":"Volhejn, Vaclav, and Christoph Lampert. “Does SGD Implicitly Optimize for Smoothness?” <i>42nd German Conference on Pattern Recognition</i>, vol. 12544, Springer, 2021, pp. 246–59, doi:<a href=\"https://doi.org/10.1007/978-3-030-71278-5_18\">10.1007/978-3-030-71278-5_18</a>.","chicago":"Volhejn, Vaclav, and Christoph Lampert. “Does SGD Implicitly Optimize for Smoothness?” In <i>42nd German Conference on Pattern Recognition</i>, 12544:246–59. LNCS. Springer, 2021. <a href=\"https://doi.org/10.1007/978-3-030-71278-5_18\">https://doi.org/10.1007/978-3-030-71278-5_18</a>.","ista":"Volhejn V, Lampert C. 2021. Does SGD implicitly optimize for smoothness? 42nd German Conference on Pattern Recognition. DAGM GCPR: German Conference on Pattern Recognition LNCS vol. 12544, 246–259."},"month":"03","file":[{"file_size":420234,"date_created":"2022-08-12T07:27:58Z","date_updated":"2022-08-12T07:27:58Z","creator":"dernst","file_id":"11820","success":1,"file_name":"2020_GCPR_submitted_Volhejn.pdf","access_level":"open_access","content_type":"application/pdf","relation":"main_file","checksum":"3e3628ab1cf658d82524963f808004ea"}],"department":[{"_id":"ChLa"}],"intvolume":"     12544","abstract":[{"text":"Modern neural networks can easily fit their training set perfectly. Surprisingly, despite being “overfit” in this way, they tend to generalize well to future data, thereby defying the classic bias–variance trade-off of machine learning theory. Of the many possible explanations, a prevalent one is that training by stochastic gradient descent (SGD) imposes an implicit bias that leads it to learn simple functions, and these simple functions generalize well. However, the specifics of this implicit bias are not well understood.\r\nIn this work, we explore the smoothness conjecture which states that SGD is implicitly biased towards learning functions that are smooth. We propose several measures to formalize the intuitive notion of smoothness, and we conduct experiments to determine whether SGD indeed implicitly optimizes for these measures. Our findings rule out the possibility that smoothness measures based on first-order derivatives are being implicitly enforced. They are supportive, though, of the smoothness conjecture for measures based on second-order derivatives.","lang":"eng"}],"has_accepted_license":"1","publication_status":"published","publication_identifier":{"eissn":["1611-3349"],"isbn":["9783030712778"],"issn":["0302-9743"]},"file_date_updated":"2022-08-12T07:27:58Z","title":"Does SGD implicitly optimize for smoothness?","oa_version":"Submitted Version","author":[{"last_name":"Volhejn","id":"d5235fb4-7a6d-11eb-b254-f25d12d631a8","full_name":"Volhejn, Vaclav","first_name":"Vaclav"},{"first_name":"Christoph","orcid":"0000-0001-8622-7887","last_name":"Lampert","full_name":"Lampert, Christoph","id":"40C20FD2-F248-11E8-B48F-1D18A9856A87"}],"day":"17","scopus_import":"1","date_created":"2021-03-01T09:01:16Z","volume":12544,"status":"public","publication":"42nd German Conference on Pattern Recognition","date_published":"2021-03-17T00:00:00Z","conference":{"start_date":"2020-09-28","end_date":"2020-10-01","name":"DAGM GCPR: German Conference on Pattern Recognition ","location":"Tübingen, Germany"},"year":"2021","ddc":["510"],"page":"246-259","quality_controlled":"1","publisher":"Springer","doi":"10.1007/978-3-030-71278-5_18","article_processing_charge":"No","type":"conference","series_title":"LNCS","date_updated":"2022-08-12T07:28:47Z","_id":"9210"},{"article_number":"a039941","department":[{"_id":"EvBe"}],"month":"07","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"ista":"Cavallari N, Artner C, Benková E. 2021. Auxin-regulated lateral root organogenesis. Cold Spring Harbor Perspectives in Biology. 13(7), a039941.","chicago":"Cavallari, Nicola, Christina Artner, and Eva Benková. “Auxin-Regulated Lateral Root Organogenesis.” <i>Cold Spring Harbor Perspectives in Biology</i>. Cold Spring Harbor Laboratory Press, 2021. <a href=\"https://doi.org/10.1101/cshperspect.a039941\">https://doi.org/10.1101/cshperspect.a039941</a>.","mla":"Cavallari, Nicola, et al. “Auxin-Regulated Lateral Root Organogenesis.” <i>Cold Spring Harbor Perspectives in Biology</i>, vol. 13, no. 7, a039941, Cold Spring Harbor Laboratory Press, 2021, doi:<a href=\"https://doi.org/10.1101/cshperspect.a039941\">10.1101/cshperspect.a039941</a>.","apa":"Cavallari, N., Artner, C., &#38; Benková, E. (2021). Auxin-regulated lateral root organogenesis. <i>Cold Spring Harbor Perspectives in Biology</i>. Cold Spring Harbor Laboratory Press. <a href=\"https://doi.org/10.1101/cshperspect.a039941\">https://doi.org/10.1101/cshperspect.a039941</a>","ama":"Cavallari N, Artner C, Benková E. Auxin-regulated lateral root organogenesis. <i>Cold Spring Harbor Perspectives in Biology</i>. 2021;13(7). doi:<a href=\"https://doi.org/10.1101/cshperspect.a039941\">10.1101/cshperspect.a039941</a>","short":"N. Cavallari, C. Artner, E. Benková, Cold Spring Harbor Perspectives in Biology 13 (2021).","ieee":"N. Cavallari, C. Artner, and E. Benková, “Auxin-regulated lateral root organogenesis,” <i>Cold Spring Harbor Perspectives in Biology</i>, vol. 13, no. 7. Cold Spring Harbor Laboratory Press, 2021."},"issue":"7","language":[{"iso":"eng"}],"oa":1,"date_created":"2021-03-01T10:08:32Z","article_type":"original","volume":13,"title":"Auxin-regulated lateral root organogenesis","oa_version":"Published Version","scopus_import":"1","day":"01","author":[{"last_name":"Cavallari","full_name":"Cavallari, Nicola","id":"457160E6-F248-11E8-B48F-1D18A9856A87","first_name":"Nicola"},{"first_name":"Christina","full_name":"Artner, Christina","id":"45DF286A-F248-11E8-B48F-1D18A9856A87","last_name":"Artner"},{"first_name":"Eva","orcid":"0000-0002-8510-9739","last_name":"Benková","full_name":"Benková, Eva","id":"38F4F166-F248-11E8-B48F-1D18A9856A87"}],"publication_identifier":{"issn":["1943-0264"]},"publication_status":"published","intvolume":"        13","abstract":[{"text":"Plant fitness is largely dependent on the root, the underground organ, which, besides its anchoring function, supplies the plant body with water and all nutrients necessary for growth and development. To exploit the soil effectively, roots must constantly integrate environmental signals and react through adjustment of growth and development. Important components of the root management strategy involve a rapid modulation of the root growth kinetics and growth direction, as well as an increase of the root system radius through formation of lateral roots (LRs). At the molecular level, such a fascinating growth and developmental flexibility of root organ requires regulatory networks that guarantee stability of the developmental program but also allows integration of various environmental inputs. The plant hormone auxin is one of the principal endogenous regulators of root system architecture by controlling primary root growth and formation of LR. In this review, we discuss recent progress in understanding molecular networks where auxin is one of the main players shaping the root system and acting as mediator between endogenous cues and environmental factors.","lang":"eng"}],"external_id":{"isi":["000692069100001"],"pmid":["33558367"]},"year":"2021","isi":1,"acknowledgement":"We apologize to all the authors whose scientific work could not be cited and discussed because of space restrictions. We thank Dr. Inge Verstraeten (ISTAustria) and Dr. Juan Carlos Montesinos-Lopez (ETH Zürich) for helpful suggestions. This work was supported by the DOC Fellowship Programme of the Austrian Academy of Sciences (25008) to C.A.","date_published":"2021-07-01T00:00:00Z","pmid":1,"status":"public","publication":"Cold Spring Harbor Perspectives in Biology","project":[{"_id":"2685A872-B435-11E9-9278-68D0E5697425","name":"Hormonal regulation of plant adaptive responses to environmental signals"}],"type":"journal_article","_id":"9212","date_updated":"2023-09-27T06:44:06Z","publisher":"Cold Spring Harbor Laboratory Press","article_processing_charge":"No","doi":"10.1101/cshperspect.a039941","quality_controlled":"1","main_file_link":[{"url":"https://doi.org/10.1101/cshperspect.a039941","open_access":"1"}]},{"date_published":"2021-04-01T00:00:00Z","publication":"Annals of Physics","status":"public","external_id":{"arxiv":["1911.04501"],"isi":["000634879800007"]},"year":"2021","isi":1,"quality_controlled":"1","main_file_link":[{"url":"https://arxiv.org/abs/1911.04501","open_access":"1"}],"type":"journal_article","_id":"9224","date_updated":"2023-08-07T13:58:30Z","publisher":"Elsevier","article_processing_charge":"No","doi":"10.1016/j.aop.2021.168415","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","citation":{"short":"D.A. Abanin, J.H. Bardarson, G. De Tomasi, S. Gopalakrishnan, V. Khemani, S.A. Parameswaran, F. Pollmann, A.C. Potter, M. Serbyn, R. Vasseur, Annals of Physics 427 (2021).","ieee":"D. A. Abanin <i>et al.</i>, “Distinguishing localization from chaos: Challenges in finite-size systems,” <i>Annals of Physics</i>, vol. 427, no. 4. Elsevier, 2021.","ama":"Abanin DA, Bardarson JH, De Tomasi G, et al. Distinguishing localization from chaos: Challenges in finite-size systems. <i>Annals of Physics</i>. 2021;427(4). doi:<a href=\"https://doi.org/10.1016/j.aop.2021.168415\">10.1016/j.aop.2021.168415</a>","mla":"Abanin, D. A., et al. “Distinguishing Localization from Chaos: Challenges in Finite-Size Systems.” <i>Annals of Physics</i>, vol. 427, no. 4, 168415, Elsevier, 2021, doi:<a href=\"https://doi.org/10.1016/j.aop.2021.168415\">10.1016/j.aop.2021.168415</a>.","apa":"Abanin, D. A., Bardarson, J. H., De Tomasi, G., Gopalakrishnan, S., Khemani, V., Parameswaran, S. A., … Vasseur, R. (2021). Distinguishing localization from chaos: Challenges in finite-size systems. <i>Annals of Physics</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.aop.2021.168415\">https://doi.org/10.1016/j.aop.2021.168415</a>","ista":"Abanin DA, Bardarson JH, De Tomasi G, Gopalakrishnan S, Khemani V, Parameswaran SA, Pollmann F, Potter AC, Serbyn M, Vasseur R. 2021. Distinguishing localization from chaos: Challenges in finite-size systems. Annals of Physics. 427(4), 168415.","chicago":"Abanin, D. A., J. H. Bardarson, G. De Tomasi, S. Gopalakrishnan, V. Khemani, S. A. Parameswaran, F. Pollmann, A. C. Potter, Maksym Serbyn, and R. Vasseur. “Distinguishing Localization from Chaos: Challenges in Finite-Size Systems.” <i>Annals of Physics</i>. Elsevier, 2021. <a href=\"https://doi.org/10.1016/j.aop.2021.168415\">https://doi.org/10.1016/j.aop.2021.168415</a>."},"issue":"4","language":[{"iso":"eng"}],"oa":1,"article_number":"168415","department":[{"_id":"MaSe"}],"month":"04","arxiv":1,"publication_identifier":{"issn":["00034916"],"eissn":["1096035X"]},"publication_status":"published","intvolume":"       427","abstract":[{"lang":"eng","text":"We re-examine attempts to study the many-body localization transition using measures that are physically natural on the ergodic/quantum chaotic regime of the phase diagram. Using simple scaling arguments and an analysis of various models for which rigorous results are available, we find that these measures can be particularly adversely affected by the strong finite-size effects observed in nearly all numerical studies of many-body localization. This severely impacts their utility in probing the transition and the localized phase. In light of this analysis, we discuss a recent study (Šuntajs et al., 2020) of the behaviour of the Thouless energy and level repulsion in disordered spin chains, and its implications for the question of whether MBL is a true phase of matter."}],"date_created":"2021-03-07T23:01:25Z","article_type":"original","volume":427,"title":"Distinguishing localization from chaos: Challenges in finite-size systems","oa_version":"Preprint","day":"01","scopus_import":"1","author":[{"last_name":"Abanin","full_name":"Abanin, D. A.","first_name":"D. A."},{"first_name":"J. H.","last_name":"Bardarson","full_name":"Bardarson, J. H."},{"last_name":"De Tomasi","full_name":"De Tomasi, G.","first_name":"G."},{"first_name":"S.","full_name":"Gopalakrishnan, S.","last_name":"Gopalakrishnan"},{"last_name":"Khemani","full_name":"Khemani, V.","first_name":"V."},{"first_name":"S. A.","full_name":"Parameswaran, S. A.","last_name":"Parameswaran"},{"first_name":"F.","full_name":"Pollmann, F.","last_name":"Pollmann"},{"first_name":"A. C.","full_name":"Potter, A. C.","last_name":"Potter"},{"id":"47809E7E-F248-11E8-B48F-1D18A9856A87","full_name":"Serbyn, Maksym","last_name":"Serbyn","first_name":"Maksym","orcid":"0000-0002-2399-5827"},{"first_name":"R.","last_name":"Vasseur","full_name":"Vasseur, R."}]},{"department":[{"_id":"RoSe"}],"article_number":"19","file":[{"file_size":391205,"date_created":"2021-03-09T11:44:34Z","creator":"dernst","date_updated":"2021-03-09T11:44:34Z","file_id":"9232","success":1,"file_name":"2021_LettersMathPhysics_Feliciangeli.pdf","access_level":"open_access","content_type":"application/pdf","relation":"main_file","checksum":"ffbfe1aad623bce7ff529c207e343b53"}],"month":"02","citation":{"mla":"Feliciangeli, Dario, et al. “Persistence of the Spectral Gap for the Landau–Pekar Equations.” <i>Letters in Mathematical Physics</i>, vol. 111, 19, Springer Nature, 2021, doi:<a href=\"https://doi.org/10.1007/s11005-020-01350-5\">10.1007/s11005-020-01350-5</a>.","apa":"Feliciangeli, D., Rademacher, S. A. E., &#38; Seiringer, R. (2021). Persistence of the spectral gap for the Landau–Pekar equations. <i>Letters in Mathematical Physics</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s11005-020-01350-5\">https://doi.org/10.1007/s11005-020-01350-5</a>","ista":"Feliciangeli D, Rademacher SAE, Seiringer R. 2021. Persistence of the spectral gap for the Landau–Pekar equations. Letters in Mathematical Physics. 111, 19.","chicago":"Feliciangeli, Dario, Simone Anna Elvira Rademacher, and Robert Seiringer. “Persistence of the Spectral Gap for the Landau–Pekar Equations.” <i>Letters in Mathematical Physics</i>. Springer Nature, 2021. <a href=\"https://doi.org/10.1007/s11005-020-01350-5\">https://doi.org/10.1007/s11005-020-01350-5</a>.","short":"D. Feliciangeli, S.A.E. Rademacher, R. Seiringer, Letters in Mathematical Physics 111 (2021).","ieee":"D. Feliciangeli, S. A. E. Rademacher, and R. Seiringer, “Persistence of the spectral gap for the Landau–Pekar equations,” <i>Letters in Mathematical Physics</i>, vol. 111. Springer Nature, 2021.","ama":"Feliciangeli D, Rademacher SAE, Seiringer R. Persistence of the spectral gap for the Landau–Pekar equations. <i>Letters in Mathematical Physics</i>. 2021;111. doi:<a href=\"https://doi.org/10.1007/s11005-020-01350-5\">10.1007/s11005-020-01350-5</a>"},"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","oa":1,"language":[{"iso":"eng"}],"volume":111,"date_created":"2021-03-07T23:01:25Z","article_type":"original","scopus_import":"1","day":"11","author":[{"full_name":"Feliciangeli, Dario","id":"41A639AA-F248-11E8-B48F-1D18A9856A87","last_name":"Feliciangeli","first_name":"Dario","orcid":"0000-0003-0754-8530"},{"orcid":"0000-0001-5059-4466","first_name":"Simone Anna Elvira","id":"856966FE-A408-11E9-977E-802DE6697425","full_name":"Rademacher, Simone Anna Elvira","last_name":"Rademacher"},{"last_name":"Seiringer","full_name":"Seiringer, Robert","id":"4AFD0470-F248-11E8-B48F-1D18A9856A87","first_name":"Robert","orcid":"0000-0002-6781-0521"}],"oa_version":"Published Version","title":"Persistence of the spectral gap for the Landau–Pekar equations","file_date_updated":"2021-03-09T11:44:34Z","publication_status":"published","publication_identifier":{"eissn":["15730530"],"issn":["03779017"]},"has_accepted_license":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"abstract":[{"lang":"eng","text":"The Landau–Pekar equations describe the dynamics of a strongly coupled polaron.\r\nHere, we provide a class of initial data for which the associated effective Hamiltonian\r\nhas a uniform spectral gap for all times. For such initial data, this allows us to extend the\r\nresults on the adiabatic theorem for the Landau–Pekar equations and their derivation\r\nfrom the Fröhlich model obtained in previous works to larger times."}],"intvolume":"       111","year":"2021","isi":1,"related_material":{"record":[{"id":"9733","status":"public","relation":"dissertation_contains"}]},"external_id":{"isi":["000617195700001"]},"ec_funded":1,"acknowledgement":"Funding from the European Union’s Horizon 2020 research and innovation programme under the ERC Grant Agreement No 694227 (D.F. and R.S.) and under the Marie Skłodowska-Curie Grant Agreement No. 754411 (S.R.) is gratefully acknowledged. Open Access funding provided by Institute of Science and Technology (IST Austria)","date_published":"2021-02-11T00:00:00Z","status":"public","publication":"Letters in Mathematical Physics","project":[{"grant_number":"694227","name":"Analysis of quantum many-body systems","call_identifier":"H2020","_id":"25C6DC12-B435-11E9-9278-68D0E5697425"},{"_id":"260C2330-B435-11E9-9278-68D0E5697425","grant_number":"754411","name":"ISTplus - Postdoctoral Fellowships","call_identifier":"H2020"},{"name":"IST Austria Open Access Fund","_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854"}],"_id":"9225","date_updated":"2023-09-07T13:30:11Z","type":"journal_article","article_processing_charge":"Yes (via OA deal)","doi":"10.1007/s11005-020-01350-5","publisher":"Springer Nature","quality_controlled":"1","ddc":["510"]},{"publisher":"The Company of Biologists","article_processing_charge":"No","doi":"10.1242/dev.176065","type":"journal_article","_id":"9226","date_updated":"2023-08-07T13:57:30Z","quality_controlled":"1","main_file_link":[{"url":"https://doi.org/10.1242/dev.176065","open_access":"1"}],"external_id":{"pmid":["33526425"],"isi":["000613906000007"]},"year":"2021","isi":1,"publication":"Development","status":"public","project":[{"_id":"254E9036-B435-11E9-9278-68D0E5697425","name":"Biophysics of information processing in gene regulation","grant_number":"P28844-B27","call_identifier":"FWF"}],"acknowledgement":"This work was supported in part by the National Science Foundation, through the Center for the Physics of Biological Function (PHY-1734030), by the National Institutes of Health (R01GM097275) and by the Fonds zur Förderung der wissenschaftlichen Forschung (FWF P28844). Deposited in PMC for release after 12 months.","date_published":"2021-02-01T00:00:00Z","pmid":1,"oa_version":"Published Version","title":"The many bits of positional information","scopus_import":"1","day":"01","author":[{"id":"3D494DCA-F248-11E8-B48F-1D18A9856A87","full_name":"Tkačik, Gašper","last_name":"Tkačik","orcid":"0000-0002-6699-1455","first_name":"Gašper"},{"first_name":"Thomas","full_name":"Gregor, Thomas","last_name":"Gregor"}],"date_created":"2021-03-07T23:01:25Z","article_type":"original","volume":148,"abstract":[{"lang":"eng","text":"Half a century after Lewis Wolpert's seminal conceptual advance on how cellular fates distribute in space, we provide a brief historical perspective on how the concept of positional information emerged and influenced the field of developmental biology and beyond. We focus on a modern interpretation of this concept in terms of information theory, largely centered on its application to cell specification in the early Drosophila embryo. We argue that a true physical variable (position) is encoded in local concentrations of patterning molecules, that this mapping is stochastic, and that the processes by which positions and corresponding cell fates are determined based on these concentrations need to take such stochasticity into account. With this approach, we shift the focus from biological mechanisms, molecules, genes and pathways to quantitative systems-level questions: where does positional information reside, how it is transformed and accessed during development, and what fundamental limits it is subject to?"}],"intvolume":"       148","publication_identifier":{"eissn":["1477-9129"]},"publication_status":"published","month":"02","article_number":"dev176065","department":[{"_id":"GaTk"}],"language":[{"iso":"eng"}],"oa":1,"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","citation":{"mla":"Tkačik, Gašper, and Thomas Gregor. “The Many Bits of Positional Information.” <i>Development</i>, vol. 148, no. 2, dev176065, The Company of Biologists, 2021, doi:<a href=\"https://doi.org/10.1242/dev.176065\">10.1242/dev.176065</a>.","apa":"Tkačik, G., &#38; Gregor, T. (2021). The many bits of positional information. <i>Development</i>. The Company of Biologists. <a href=\"https://doi.org/10.1242/dev.176065\">https://doi.org/10.1242/dev.176065</a>","ista":"Tkačik G, Gregor T. 2021. The many bits of positional information. Development. 148(2), dev176065.","chicago":"Tkačik, Gašper, and Thomas Gregor. “The Many Bits of Positional Information.” <i>Development</i>. The Company of Biologists, 2021. <a href=\"https://doi.org/10.1242/dev.176065\">https://doi.org/10.1242/dev.176065</a>.","short":"G. Tkačik, T. Gregor, Development 148 (2021).","ieee":"G. Tkačik and T. Gregor, “The many bits of positional information,” <i>Development</i>, vol. 148, no. 2. The Company of Biologists, 2021.","ama":"Tkačik G, Gregor T. The many bits of positional information. <i>Development</i>. 2021;148(2). doi:<a href=\"https://doi.org/10.1242/dev.176065\">10.1242/dev.176065</a>"},"issue":"2"},{"publication_status":"published","quality_controlled":"1","publication_identifier":{"isbn":["9783030678982"],"issn":["0302-9743"],"eissn":["1611-3349"]},"page":"346-358","intvolume":"     12601","abstract":[{"lang":"eng","text":"In the multiway cut problem we are given a weighted undirected graph   G=(V,E)  and a set   T⊆V  of k terminals. The goal is to find a minimum weight set of edges   E′⊆E  with the property that by removing   E′  from G all the terminals become disconnected. In this paper we present a simple local search approximation algorithm for the multiway cut problem with approximation ratio   2−2k . We present an experimental evaluation of the performance of our local search algorithm and show that it greatly outperforms the isolation heuristic of Dalhaus et al. and it has similar performance as the much more complex algorithms of Calinescu et al., Sharma and Vondrak, and Buchbinder et al. which have the currently best known approximation ratios for this problem."}],"_id":"9227","volume":12601,"date_updated":"2023-10-10T09:29:08Z","date_created":"2021-03-07T23:01:25Z","type":"conference","day":"28","scopus_import":"1","alternative_title":["LNCS"],"article_processing_charge":"No","doi":"10.1007/978-3-030-67899-9_28","author":[{"last_name":"Bloch-Hansen","full_name":"Bloch-Hansen, Andrew","first_name":"Andrew"},{"id":"C1531CAE-36E9-11EA-845F-33AA3DDC885E","full_name":"Samei, Nasim","last_name":"Samei","first_name":"Nasim"},{"full_name":"Solis-Oba, Roberto","last_name":"Solis-Oba","first_name":"Roberto"}],"publisher":"Springer Nature","oa_version":"None","title":"Experimental evaluation of a local search approximation algorithm for the multiway cut problem","citation":{"ama":"Bloch-Hansen A, Samei N, Solis-Oba R. Experimental evaluation of a local search approximation algorithm for the multiway cut problem. In: <i>Conference on Algorithms and Discrete Applied Mathematics</i>. Vol 12601. Springer Nature; 2021:346-358. doi:<a href=\"https://doi.org/10.1007/978-3-030-67899-9_28\">10.1007/978-3-030-67899-9_28</a>","short":"A. Bloch-Hansen, N. Samei, R. Solis-Oba, in:, Conference on Algorithms and Discrete Applied Mathematics, Springer Nature, 2021, pp. 346–358.","ieee":"A. Bloch-Hansen, N. Samei, and R. Solis-Oba, “Experimental evaluation of a local search approximation algorithm for the multiway cut problem,” in <i>Conference on Algorithms and Discrete Applied Mathematics</i>, Rupnagar, India, 2021, vol. 12601, pp. 346–358.","chicago":"Bloch-Hansen, Andrew, Nasim Samei, and Roberto Solis-Oba. “Experimental Evaluation of a Local Search Approximation Algorithm for the Multiway Cut Problem.” In <i>Conference on Algorithms and Discrete Applied Mathematics</i>, 12601:346–58. Springer Nature, 2021. <a href=\"https://doi.org/10.1007/978-3-030-67899-9_28\">https://doi.org/10.1007/978-3-030-67899-9_28</a>.","ista":"Bloch-Hansen A, Samei N, Solis-Oba R. 2021. Experimental evaluation of a local search approximation algorithm for the multiway cut problem. Conference on Algorithms and Discrete Applied Mathematics. CALDAM: Conference on Algorithms and Discrete Applied Mathematics, LNCS, vol. 12601, 346–358.","mla":"Bloch-Hansen, Andrew, et al. “Experimental Evaluation of a Local Search Approximation Algorithm for the Multiway Cut Problem.” <i>Conference on Algorithms and Discrete Applied Mathematics</i>, vol. 12601, Springer Nature, 2021, pp. 346–58, doi:<a href=\"https://doi.org/10.1007/978-3-030-67899-9_28\">10.1007/978-3-030-67899-9_28</a>.","apa":"Bloch-Hansen, A., Samei, N., &#38; Solis-Oba, R. (2021). Experimental evaluation of a local search approximation algorithm for the multiway cut problem. In <i>Conference on Algorithms and Discrete Applied Mathematics</i> (Vol. 12601, pp. 346–358). Rupnagar, India: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-030-67899-9_28\">https://doi.org/10.1007/978-3-030-67899-9_28</a>"},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2021-01-28T00:00:00Z","conference":{"end_date":"2021-02-13","start_date":"2021-02-11","name":"CALDAM: Conference on Algorithms and Discrete Applied Mathematics","location":"Rupnagar, India"},"language":[{"iso":"eng"}],"status":"public","publication":"Conference on Algorithms and Discrete Applied Mathematics","department":[{"_id":"VlKo"}],"year":"2021","month":"01"},{"intvolume":"        25","abstract":[{"text":"Legacy conferences are costly and time consuming, and exclude scientists lacking various resources or abilities. During the 2020 pandemic, we created an online conference platform, Neuromatch Conferences (NMC), aimed at developing technological and cultural changes to make conferences more democratic, scalable, and accessible. We discuss the lessons we learned.","lang":"eng"}],"has_accepted_license":"1","publication_identifier":{"eissn":["1879-307X"],"issn":["1364-6613"]},"publication_status":"published","file_date_updated":"2022-05-27T07:31:24Z","oa_version":"Submitted Version","title":"Towards democratizing and automating online conferences: Lessons from the Neuromatch Conferences","author":[{"first_name":"Titipat","last_name":"Achakulvisut","full_name":"Achakulvisut, Titipat"},{"first_name":"Tulakan","full_name":"Ruangrong, Tulakan","last_name":"Ruangrong"},{"last_name":"Mineault","full_name":"Mineault, Patrick","first_name":"Patrick"},{"last_name":"Vogels","id":"CB6FF8D2-008F-11EA-8E08-2637E6697425","full_name":"Vogels, Tim P","first_name":"Tim P","orcid":"0000-0003-3295-6181"},{"first_name":"Megan A.K.","full_name":"Peters, Megan A.K.","last_name":"Peters"},{"first_name":"Panayiota","last_name":"Poirazi","full_name":"Poirazi, Panayiota"},{"full_name":"Rozell, Christopher","last_name":"Rozell","first_name":"Christopher"},{"last_name":"Wyble","full_name":"Wyble, Brad","first_name":"Brad"},{"full_name":"Goodman, Dan F.M.","last_name":"Goodman","first_name":"Dan F.M."},{"full_name":"Kording, Konrad Paul","last_name":"Kording","first_name":"Konrad Paul"}],"day":"01","scopus_import":"1","article_type":"original","date_created":"2021-03-07T23:01:25Z","volume":25,"language":[{"iso":"eng"}],"oa":1,"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","issue":"4","citation":{"chicago":"Achakulvisut, Titipat, Tulakan Ruangrong, Patrick Mineault, Tim P Vogels, Megan A.K. Peters, Panayiota Poirazi, Christopher Rozell, Brad Wyble, Dan F.M. Goodman, and Konrad Paul Kording. “Towards Democratizing and Automating Online Conferences: Lessons from the Neuromatch Conferences.” <i>Trends in Cognitive Sciences</i>. Elsevier, 2021. <a href=\"https://doi.org/10.1016/j.tics.2021.01.007\">https://doi.org/10.1016/j.tics.2021.01.007</a>.","ista":"Achakulvisut T, Ruangrong T, Mineault P, Vogels TP, Peters MAK, Poirazi P, Rozell C, Wyble B, Goodman DFM, Kording KP. 2021. Towards democratizing and automating online conferences: Lessons from the Neuromatch Conferences. Trends in Cognitive Sciences. 25(4), 265–268.","apa":"Achakulvisut, T., Ruangrong, T., Mineault, P., Vogels, T. P., Peters, M. A. K., Poirazi, P., … Kording, K. P. (2021). Towards democratizing and automating online conferences: Lessons from the Neuromatch Conferences. <i>Trends in Cognitive Sciences</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.tics.2021.01.007\">https://doi.org/10.1016/j.tics.2021.01.007</a>","mla":"Achakulvisut, Titipat, et al. “Towards Democratizing and Automating Online Conferences: Lessons from the Neuromatch Conferences.” <i>Trends in Cognitive Sciences</i>, vol. 25, no. 4, Elsevier, 2021, pp. 265–68, doi:<a href=\"https://doi.org/10.1016/j.tics.2021.01.007\">10.1016/j.tics.2021.01.007</a>.","ama":"Achakulvisut T, Ruangrong T, Mineault P, et al. Towards democratizing and automating online conferences: Lessons from the Neuromatch Conferences. <i>Trends in Cognitive Sciences</i>. 2021;25(4):265-268. doi:<a href=\"https://doi.org/10.1016/j.tics.2021.01.007\">10.1016/j.tics.2021.01.007</a>","ieee":"T. Achakulvisut <i>et al.</i>, “Towards democratizing and automating online conferences: Lessons from the Neuromatch Conferences,” <i>Trends in Cognitive Sciences</i>, vol. 25, no. 4. Elsevier, pp. 265–268, 2021.","short":"T. Achakulvisut, T. Ruangrong, P. Mineault, T.P. Vogels, M.A.K. Peters, P. Poirazi, C. Rozell, B. Wyble, D.F.M. Goodman, K.P. Kording, Trends in Cognitive Sciences 25 (2021) 265–268."},"month":"04","file":[{"success":1,"file_name":"2021_TrendsCognitiveSciences_Achakulvisut.pdf","access_level":"open_access","content_type":"application/pdf","relation":"main_file","checksum":"87e39ea7bd266b976e8631b66979214d","file_size":380720,"date_created":"2022-05-27T07:31:24Z","date_updated":"2022-05-27T07:31:24Z","creator":"dernst","file_id":"11415"}],"department":[{"_id":"TiVo"}],"ddc":["570"],"page":"265-268","quality_controlled":"1","publisher":"Elsevier","doi":"10.1016/j.tics.2021.01.007","article_processing_charge":"No","type":"journal_article","date_updated":"2023-08-07T13:59:07Z","_id":"9228","status":"public","publication":"Trends in Cognitive Sciences","date_published":"2021-04-01T00:00:00Z","acknowledgement":"We thank all of our volunteers from the NMC conferences (list of names in the appendix). We also thank the NSF for support from 1734220 to B.W., and DARPA for support to T.A.","pmid":1,"external_id":{"pmid":["33608214"],"isi":["000627418000001"]},"year":"2021","isi":1},{"publication_status":"submitted","main_file_link":[{"url":"https://arxiv.org/abs/2103.04817","open_access":"1"}],"abstract":[{"text":"We consider a model of the Riemann zeta function on the critical axis and study its maximum over intervals of length (log T)θ, where θ is either fixed or tends to zero at a suitable rate.\r\nIt is shown that the deterministic level of the maximum interpolates smoothly between the ones\r\nof log-correlated variables and of i.i.d. random variables, exhibiting a smooth transition ‘from\r\n3/4 to 1/4’ in the second order. This provides a natural context where extreme value statistics of\r\nlog-correlated variables with time-dependent variance and rate occur. A key ingredient of the\r\nproof is a precise upper tail tightness estimate for the maximum of the model on intervals of\r\nsize one, that includes a Gaussian correction. This correction is expected to be present for the\r\nRiemann zeta function and pertains to the question of the correct order of the maximum of\r\nthe zeta function in large intervals.","lang":"eng"}],"date_created":"2021-03-09T11:08:15Z","type":"preprint","_id":"9230","date_updated":"2023-05-03T10:22:59Z","oa_version":"Preprint","title":"Maxima of a random model of the Riemann zeta function over intervals of varying length","article_processing_charge":"No","day":"08","doi":"10.48550/arXiv.2103.04817","author":[{"first_name":"Louis-Pierre","full_name":"Arguin, Louis-Pierre","last_name":"Arguin"},{"last_name":"Dubach","full_name":"Dubach, Guillaume","id":"D5C6A458-10C4-11EA-ABF4-A4B43DDC885E","orcid":"0000-0001-6892-8137","first_name":"Guillaume"},{"last_name":"Hartung","full_name":"Hartung, Lisa","first_name":"Lisa"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2021-03-08T00:00:00Z","acknowledgement":"The research of L.-P. A. is supported in part by the grant NSF CAREER DMS-1653602. G. D. gratefully acknowledges support from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 754411. The research of L. H. is supported in part by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) through Project-ID 233630050 -TRR 146, Project-ID 443891315 within SPP 2265 and Project-ID 446173099.","citation":{"chicago":"Arguin, Louis-Pierre, Guillaume Dubach, and Lisa Hartung. “Maxima of a Random Model of the Riemann Zeta Function over Intervals of Varying Length.” <i>ArXiv</i>, n.d. <a href=\"https://doi.org/10.48550/arXiv.2103.04817\">https://doi.org/10.48550/arXiv.2103.04817</a>.","ista":"Arguin L-P, Dubach G, Hartung L. Maxima of a random model of the Riemann zeta function over intervals of varying length. arXiv, 2103.04817.","mla":"Arguin, Louis-Pierre, et al. “Maxima of a Random Model of the Riemann Zeta Function over Intervals of Varying Length.” <i>ArXiv</i>, 2103.04817, doi:<a href=\"https://doi.org/10.48550/arXiv.2103.04817\">10.48550/arXiv.2103.04817</a>.","apa":"Arguin, L.-P., Dubach, G., &#38; Hartung, L. (n.d.). Maxima of a random model of the Riemann zeta function over intervals of varying length. <i>arXiv</i>. <a href=\"https://doi.org/10.48550/arXiv.2103.04817\">https://doi.org/10.48550/arXiv.2103.04817</a>","ama":"Arguin L-P, Dubach G, Hartung L. Maxima of a random model of the Riemann zeta function over intervals of varying length. <i>arXiv</i>. doi:<a href=\"https://doi.org/10.48550/arXiv.2103.04817\">10.48550/arXiv.2103.04817</a>","short":"L.-P. Arguin, G. Dubach, L. Hartung, ArXiv (n.d.).","ieee":"L.-P. Arguin, G. Dubach, and L. Hartung, “Maxima of a random model of the Riemann zeta function over intervals of varying length,” <i>arXiv</i>. ."},"ec_funded":1,"publication":"arXiv","language":[{"iso":"eng"}],"status":"public","project":[{"grant_number":"754411","name":"ISTplus - Postdoctoral Fellowships","call_identifier":"H2020","_id":"260C2330-B435-11E9-9278-68D0E5697425"}],"oa":1,"article_number":"2103.04817","department":[{"_id":"LaEr"}],"arxiv":1,"month":"03","external_id":{"arxiv":["2103.04817"]},"year":"2021"},{"keyword":["Computer Networks and Communications","Software","Artificial Intelligence"],"isi":1,"year":"2021","external_id":{"isi":["000625002100001"]},"ec_funded":1,"acknowledgement":"The authors sincerely thank the Editor-in-Chief and anonymous referees for their careful reading, constructive comments and fruitful suggestions that help improve the manuscript. The research of the first author is supported by the National Research Foundation (NRF) South Africa (S& F-DSI/NRF Free Standing Postdoctoral Fellowship; Grant Number: 120784). The first author also acknowledges the financial support from DSI/NRF, South Africa Center of Excellence in Mathematical and Statistical Sciences (CoE-MaSS) Postdoctoral Fellowship. The second author has received funding from the European Research Council (ERC) under the European Union’s Seventh Framework Program (FP7 - 2007-2013) (Grant agreement No. 616160). Open Access funding provided by Institute of Science and Technology (IST Austria).","date_published":"2021-06-01T00:00:00Z","project":[{"name":"Discrete Optimization in Computer Vision: Theory and Practice","grant_number":"616160","call_identifier":"FP7","_id":"25FBA906-B435-11E9-9278-68D0E5697425"},{"name":"IST Austria Open Access Fund","_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854"}],"status":"public","publication":"Networks and Spatial Economics","date_updated":"2023-09-05T15:32:32Z","_id":"9234","type":"journal_article","doi":"10.1007/s11067-021-09517-w","article_processing_charge":"Yes (via OA deal)","publisher":"Springer Nature","quality_controlled":"1","page":"291-323","ddc":["510"],"department":[{"_id":"VlKo"}],"file":[{"content_type":"application/pdf","access_level":"open_access","file_name":"2021_NetworksSpatialEconomics_Shehu.pdf","success":1,"checksum":"22b4253a2e5da843622a2df713784b4c","relation":"main_file","date_updated":"2021-08-11T12:44:16Z","creator":"kschuh","file_size":834964,"date_created":"2021-08-11T12:44:16Z","file_id":"9884"}],"month":"06","issue":"2","citation":{"ama":"Izuchukwu C, Shehu Y. New inertial projection methods for solving multivalued variational inequality problems beyond monotonicity. <i>Networks and Spatial Economics</i>. 2021;21(2):291-323. doi:<a href=\"https://doi.org/10.1007/s11067-021-09517-w\">10.1007/s11067-021-09517-w</a>","short":"C. Izuchukwu, Y. Shehu, Networks and Spatial Economics 21 (2021) 291–323.","ieee":"C. Izuchukwu and Y. Shehu, “New inertial projection methods for solving multivalued variational inequality problems beyond monotonicity,” <i>Networks and Spatial Economics</i>, vol. 21, no. 2. Springer Nature, pp. 291–323, 2021.","ista":"Izuchukwu C, Shehu Y. 2021. New inertial projection methods for solving multivalued variational inequality problems beyond monotonicity. Networks and Spatial Economics. 21(2), 291–323.","chicago":"Izuchukwu, Chinedu, and Yekini Shehu. “New Inertial Projection Methods for Solving Multivalued Variational Inequality Problems beyond Monotonicity.” <i>Networks and Spatial Economics</i>. Springer Nature, 2021. <a href=\"https://doi.org/10.1007/s11067-021-09517-w\">https://doi.org/10.1007/s11067-021-09517-w</a>.","mla":"Izuchukwu, Chinedu, and Yekini Shehu. “New Inertial Projection Methods for Solving Multivalued Variational Inequality Problems beyond Monotonicity.” <i>Networks and Spatial Economics</i>, vol. 21, no. 2, Springer Nature, 2021, pp. 291–323, doi:<a href=\"https://doi.org/10.1007/s11067-021-09517-w\">10.1007/s11067-021-09517-w</a>.","apa":"Izuchukwu, C., &#38; Shehu, Y. (2021). New inertial projection methods for solving multivalued variational inequality problems beyond monotonicity. <i>Networks and Spatial Economics</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s11067-021-09517-w\">https://doi.org/10.1007/s11067-021-09517-w</a>"},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","oa":1,"language":[{"iso":"eng"}],"volume":21,"article_type":"original","date_created":"2021-03-10T12:18:47Z","author":[{"last_name":"Izuchukwu","full_name":"Izuchukwu, Chinedu","first_name":"Chinedu"},{"first_name":"Yekini","orcid":"0000-0001-9224-7139","id":"3FC7CB58-F248-11E8-B48F-1D18A9856A87","full_name":"Shehu, Yekini","last_name":"Shehu"}],"scopus_import":"1","day":"01","oa_version":"Published Version","title":"New inertial projection methods for solving multivalued variational inequality problems beyond monotonicity","publication_identifier":{"issn":["1566-113X"],"eissn":["1572-9427"]},"publication_status":"published","file_date_updated":"2021-08-11T12:44:16Z","has_accepted_license":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"abstract":[{"text":"In this paper, we present two new inertial projection-type methods for solving multivalued variational inequality problems in finite-dimensional spaces. We establish the convergence of the sequence generated by these methods when the multivalued mapping associated with the problem is only required to be locally bounded without any monotonicity assumption. Furthermore, the inertial techniques that we employ in this paper are quite different from the ones used in most papers. Moreover, based on the weaker assumptions on the inertial factor in our methods, we derive several special cases of our methods. Finally, we present some experimental results to illustrate the profits that we gain by introducing the inertial extrapolation steps.","lang":"eng"}],"intvolume":"        21"},{"main_file_link":[{"open_access":"1","url":"https://upcommons.upc.edu/bitstream/handle/2117/363528/Pb%20mengyao.pdf?sequence=1&isAllowed=y"}],"quality_controlled":"1","page":"4967–4978","date_updated":"2023-10-03T09:59:55Z","_id":"9235","type":"journal_article","doi":"10.1021/acsnano.0c09866","article_processing_charge":"No","publisher":"American Chemical Society ","pmid":1,"date_published":"2021-03-01T00:00:00Z","acknowledgement":"This work was supported by the European Regional Development Funds. M.Y.L., X.H., T.Z., and K.X. thank the China Scholarship Council for scholarship support. M.I. acknowledges financial support from IST Austria. J.L. acknowledges support from the National Natural Science Foundation of China (No. 22008091), the funding for scientific research startup of Jiangsu University (No. 19JDG044), and Jiangsu Provincial Program for High-Level Innovative and Entrepreneurial Talents Introduction. J.L. is a Serra Húnter fellow and is grateful to the ICREA Academia program and projects MICINN/FEDER RTI2018-093996-B-C31 and GC 2017 SGR 128. ICN2 acknowledges funding from Generalitat de Catalunya 2017 SGR 327 and the Spanish MINECO ENE2017-85087-C3. ICN2 is supported by the Severo Ochoa program from Spanish MINECO (Grant No. SEV-2017-0706) and is funded by the CERCA Programme/Generalitat de Catalunya. Part of the present work has been performed in the framework of Universitat Autònoma de Barcelona Materials Science PhD program. T.Z. has received funding from the CSC-UAB PhD scholarship program.","publication":"ACS Nano","status":"public","keyword":["General Engineering","General Physics and Astronomy","General Materials Science"],"year":"2021","isi":1,"external_id":{"pmid":["33645986"],"isi":["000634569100106"]},"publication_status":"published","publication_identifier":{"issn":["1936-0851"],"eissn":["1936-086X"]},"intvolume":"        15","abstract":[{"lang":"eng","text":"Cu2–xS has become one of the most promising thermoelectric materials for application in the middle-high temperature range. Its advantages include the abundance, low cost, and safety of its elements and a high performance at relatively elevated temperatures. However, stability issues limit its operation current and temperature, thus calling for the optimization of the material performance in the middle temperature range. Here, we present a synthetic protocol for large scale production of covellite CuS nanoparticles at ambient temperature and atmosphere, and using water as a solvent. The crystal phase and stoichiometry of the particles are afterward tuned through an annealing process at a moderate temperature under inert or reducing atmosphere. While annealing under argon results in Cu1.8S nanopowder with a rhombohedral crystal phase, annealing in an atmosphere containing hydrogen leads to tetragonal Cu1.96S. High temperature X-ray diffraction analysis shows the material annealed in argon to transform to the cubic phase at ca. 400 K, while the material annealed in the presence of hydrogen undergoes two phase transitions, first to hexagonal and then to the cubic structure. The annealing atmosphere, temperature, and time allow adjustment of the density of copper vacancies and thus tuning of the charge carrier concentration and material transport properties. In this direction, the material annealed under Ar is characterized by higher electrical conductivities but lower Seebeck coefficients than the material annealed in the presence of hydrogen. By optimizing the charge carrier concentration through the annealing time, Cu2–xS with record figures of merit in the middle temperature range, up to 1.41 at 710 K, is obtained. We finally demonstrate that this strategy, based on a low-cost and scalable solution synthesis process, is also suitable for the production of high performance Cu2–xS layers using high throughput and cost-effective printing technologies."}],"volume":15,"article_type":"original","date_created":"2021-03-10T20:12:45Z","author":[{"first_name":"Mengyao","full_name":"Li, Mengyao","last_name":"Li"},{"id":"2A70014E-F248-11E8-B48F-1D18A9856A87","full_name":"Liu, Yu","last_name":"Liu","first_name":"Yu","orcid":"0000-0001-7313-6740"},{"full_name":"Zhang, Yu","last_name":"Zhang","first_name":"Yu"},{"last_name":"Han","full_name":"Han, Xu","first_name":"Xu"},{"first_name":"Ting","full_name":"Zhang, Ting","last_name":"Zhang"},{"first_name":"Yong","full_name":"Zuo, Yong","last_name":"Zuo"},{"first_name":"Chenyang","full_name":"Xie, Chenyang","last_name":"Xie"},{"first_name":"Ke","last_name":"Xiao","full_name":"Xiao, Ke"},{"full_name":"Arbiol, Jordi","last_name":"Arbiol","first_name":"Jordi"},{"last_name":"Llorca","full_name":"Llorca, Jordi","first_name":"Jordi"},{"last_name":"Ibáñez","full_name":"Ibáñez, Maria","id":"43C61214-F248-11E8-B48F-1D18A9856A87","first_name":"Maria","orcid":"0000-0001-5013-2843"},{"last_name":"Liu","full_name":"Liu, Junfeng","first_name":"Junfeng"},{"full_name":"Cabot, Andreu","last_name":"Cabot","first_name":"Andreu"}],"scopus_import":"1","day":"01","title":"Effect of the annealing atmosphere on crystal phase and thermoelectric properties of copper sulfide","oa_version":"Submitted Version","issue":"3","citation":{"ieee":"M. Li <i>et al.</i>, “Effect of the annealing atmosphere on crystal phase and thermoelectric properties of copper sulfide,” <i>ACS Nano</i>, vol. 15, no. 3. American Chemical Society , pp. 4967–4978, 2021.","short":"M. Li, Y. Liu, Y. Zhang, X. Han, T. Zhang, Y. Zuo, C. Xie, K. Xiao, J. Arbiol, J. Llorca, M. Ibáñez, J. Liu, A. Cabot, ACS Nano 15 (2021) 4967–4978.","ama":"Li M, Liu Y, Zhang Y, et al. Effect of the annealing atmosphere on crystal phase and thermoelectric properties of copper sulfide. <i>ACS Nano</i>. 2021;15(3):4967–4978. doi:<a href=\"https://doi.org/10.1021/acsnano.0c09866\">10.1021/acsnano.0c09866</a>","apa":"Li, M., Liu, Y., Zhang, Y., Han, X., Zhang, T., Zuo, Y., … Cabot, A. (2021). Effect of the annealing atmosphere on crystal phase and thermoelectric properties of copper sulfide. <i>ACS Nano</i>. American Chemical Society . <a href=\"https://doi.org/10.1021/acsnano.0c09866\">https://doi.org/10.1021/acsnano.0c09866</a>","mla":"Li, Mengyao, et al. “Effect of the Annealing Atmosphere on Crystal Phase and Thermoelectric Properties of Copper Sulfide.” <i>ACS Nano</i>, vol. 15, no. 3, American Chemical Society , 2021, pp. 4967–4978, doi:<a href=\"https://doi.org/10.1021/acsnano.0c09866\">10.1021/acsnano.0c09866</a>.","chicago":"Li, Mengyao, Yu Liu, Yu Zhang, Xu Han, Ting Zhang, Yong Zuo, Chenyang Xie, et al. “Effect of the Annealing Atmosphere on Crystal Phase and Thermoelectric Properties of Copper Sulfide.” <i>ACS Nano</i>. American Chemical Society , 2021. <a href=\"https://doi.org/10.1021/acsnano.0c09866\">https://doi.org/10.1021/acsnano.0c09866</a>.","ista":"Li M, Liu Y, Zhang Y, Han X, Zhang T, Zuo Y, Xie C, Xiao K, Arbiol J, Llorca J, Ibáñez M, Liu J, Cabot A. 2021. Effect of the annealing atmosphere on crystal phase and thermoelectric properties of copper sulfide. ACS Nano. 15(3), 4967–4978."},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa":1,"language":[{"iso":"eng"}],"department":[{"_id":"MaIb"}],"month":"03"},{"oa":1,"language":[{"iso":"eng"}],"citation":{"ama":"Avni G, Henzinger TA, Žikelić Đ. Bidding mechanisms in graph games. <i>Journal of Computer and System Sciences</i>. 2021;119(8):133-144. doi:<a href=\"https://doi.org/10.1016/j.jcss.2021.02.008\">10.1016/j.jcss.2021.02.008</a>","short":"G. Avni, T.A. Henzinger, Đ. Žikelić, Journal of Computer and System Sciences 119 (2021) 133–144.","ieee":"G. Avni, T. A. Henzinger, and Đ. Žikelić, “Bidding mechanisms in graph games,” <i>Journal of Computer and System Sciences</i>, vol. 119, no. 8. Elsevier, pp. 133–144, 2021.","chicago":"Avni, Guy, Thomas A Henzinger, and Đorđe Žikelić. “Bidding Mechanisms in Graph Games.” <i>Journal of Computer and System Sciences</i>. Elsevier, 2021. <a href=\"https://doi.org/10.1016/j.jcss.2021.02.008\">https://doi.org/10.1016/j.jcss.2021.02.008</a>.","ista":"Avni G, Henzinger TA, Žikelić Đ. 2021. Bidding mechanisms in graph games. Journal of Computer and System Sciences. 119(8), 133–144.","mla":"Avni, Guy, et al. “Bidding Mechanisms in Graph Games.” <i>Journal of Computer and System Sciences</i>, vol. 119, no. 8, Elsevier, 2021, pp. 133–44, doi:<a href=\"https://doi.org/10.1016/j.jcss.2021.02.008\">10.1016/j.jcss.2021.02.008</a>.","apa":"Avni, G., Henzinger, T. A., &#38; Žikelić, Đ. (2021). Bidding mechanisms in graph games. <i>Journal of Computer and System Sciences</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jcss.2021.02.008\">https://doi.org/10.1016/j.jcss.2021.02.008</a>"},"issue":"8","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","arxiv":1,"month":"03","department":[{"_id":"ToHe"}],"intvolume":"       119","abstract":[{"lang":"eng","text":"A graph game proceeds as follows: two players move a token through a graph to produce a finite or infinite path, which determines the payoff of the game. We study bidding games in which in each turn, an auction determines which player moves the token. Bidding games were largely studied in combination with two variants of first-price auctions called “Richman” and “poorman” bidding. We study taxman bidding, which span the spectrum between the two. The game is parameterized by a constant : portion τ of the winning bid is paid to the other player, and portion  to the bank. While finite-duration (reachability) taxman games have been studied before, we present, for the first time, results on infinite-duration taxman games: we unify, generalize, and simplify previous equivalences between bidding games and a class of stochastic games called random-turn games."}],"publication_status":"published","publication_identifier":{"issn":["0022-0000"],"eissn":["1090-2724"]},"scopus_import":"1","day":"03","author":[{"id":"463C8BC2-F248-11E8-B48F-1D18A9856A87","full_name":"Avni, Guy","last_name":"Avni","first_name":"Guy","orcid":"0000-0001-5588-8287"},{"full_name":"Henzinger, Thomas A","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","last_name":"Henzinger","first_name":"Thomas A","orcid":"0000-0002-2985-7724"},{"last_name":"Žikelić","full_name":"Žikelić, Đorđe","first_name":"Đorđe"}],"title":"Bidding mechanisms in graph games","oa_version":"Preprint","volume":119,"date_created":"2021-03-14T23:01:32Z","article_type":"original","publication":"Journal of Computer and System Sciences","status":"public","date_published":"2021-03-03T00:00:00Z","year":"2021","isi":1,"related_material":{"record":[{"relation":"earlier_version","status":"public","id":"6884"}]},"external_id":{"isi":["000634149800009"],"arxiv":["1905.03835"]},"page":"133-144","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.1905.03835"}],"quality_controlled":"1","article_processing_charge":"No","doi":"10.1016/j.jcss.2021.02.008","publisher":"Elsevier","_id":"9239","date_updated":"2023-08-07T14:08:34Z","type":"journal_article"},{"page":"253-283","ddc":["510"],"quality_controlled":"1","article_processing_charge":"Yes (via OA deal)","doi":"10.1016/j.jde.2021.02.048","publisher":"Elsevier","_id":"9240","date_updated":"2023-08-07T14:08:05Z","type":"journal_article","publication":"Journal of Differential Equations","status":"public","project":[{"call_identifier":"H2020","name":"ISTplus - Postdoctoral Fellowships","grant_number":"754411","_id":"260C2330-B435-11E9-9278-68D0E5697425"}],"ec_funded":1,"acknowledgement":"All authors thank the anonymous referee for his/her careful reading of the manuscript and valuable suggestions. This paper was motivated by stimulating discussions at the First Berlin–Leipzig Workshop on Fluctuating Hydrodynamics in August 2019 with Ana Djurdjevac, Rupert Klein and Ralf Kornhuber. JZ gratefully acknowledges funding by a Royal Society Wolfson Research Merit Award. FC gratefully acknowledges funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No. 754411.","date_published":"2021-05-25T00:00:00Z","isi":1,"year":"2021","external_id":{"isi":["000634823300010"]},"has_accepted_license":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"abstract":[{"lang":"eng","text":"A stochastic PDE, describing mesoscopic fluctuations in systems of weakly interacting inertial particles of finite volume, is proposed and analysed in any finite dimension . It is a regularised and inertial version of the Dean–Kawasaki model. A high-probability well-posedness theory for this model is developed. This theory improves significantly on the spatial scaling restrictions imposed in an earlier work of the same authors, which applied only to significantly larger particles in one dimension. The well-posedness theory now applies in d-dimensions when the particle-width ϵ is proportional to  for  and N is the number of particles. This scaling is optimal in a certain Sobolev norm. Key tools of the analysis are fractional Sobolev spaces, sharp bounds on Bessel functions, separability of the regularisation in the d-spatial dimensions, and use of the Faà di Bruno's formula."}],"intvolume":"       284","file_date_updated":"2021-03-22T07:18:01Z","publication_identifier":{"eissn":["1090-2732"],"issn":["0022-0396"]},"publication_status":"published","scopus_import":"1","day":"25","author":[{"id":"2CEB641C-A400-11E9-A717-D712E6697425","full_name":"Cornalba, Federico","last_name":"Cornalba","first_name":"Federico"},{"first_name":"Tony","full_name":"Shardlow, Tony","last_name":"Shardlow"},{"first_name":"Johannes","last_name":"Zimmer","full_name":"Zimmer, Johannes"}],"oa_version":"Published Version","title":"Well-posedness for a regularised inertial Dean–Kawasaki model for slender particles in several space dimensions","volume":284,"date_created":"2021-03-14T23:01:32Z","article_type":"original","oa":1,"language":[{"iso":"eng"}],"citation":{"ama":"Cornalba F, Shardlow T, Zimmer J. Well-posedness for a regularised inertial Dean–Kawasaki model for slender particles in several space dimensions. <i>Journal of Differential Equations</i>. 2021;284(5):253-283. doi:<a href=\"https://doi.org/10.1016/j.jde.2021.02.048\">10.1016/j.jde.2021.02.048</a>","short":"F. Cornalba, T. Shardlow, J. Zimmer, Journal of Differential Equations 284 (2021) 253–283.","ieee":"F. Cornalba, T. Shardlow, and J. Zimmer, “Well-posedness for a regularised inertial Dean–Kawasaki model for slender particles in several space dimensions,” <i>Journal of Differential Equations</i>, vol. 284, no. 5. Elsevier, pp. 253–283, 2021.","chicago":"Cornalba, Federico, Tony Shardlow, and Johannes Zimmer. “Well-Posedness for a Regularised Inertial Dean–Kawasaki Model for Slender Particles in Several Space Dimensions.” <i>Journal of Differential Equations</i>. Elsevier, 2021. <a href=\"https://doi.org/10.1016/j.jde.2021.02.048\">https://doi.org/10.1016/j.jde.2021.02.048</a>.","ista":"Cornalba F, Shardlow T, Zimmer J. 2021. Well-posedness for a regularised inertial Dean–Kawasaki model for slender particles in several space dimensions. Journal of Differential Equations. 284(5), 253–283.","mla":"Cornalba, Federico, et al. “Well-Posedness for a Regularised Inertial Dean–Kawasaki Model for Slender Particles in Several Space Dimensions.” <i>Journal of Differential Equations</i>, vol. 284, no. 5, Elsevier, 2021, pp. 253–83, doi:<a href=\"https://doi.org/10.1016/j.jde.2021.02.048\">10.1016/j.jde.2021.02.048</a>.","apa":"Cornalba, F., Shardlow, T., &#38; Zimmer, J. (2021). Well-posedness for a regularised inertial Dean–Kawasaki model for slender particles in several space dimensions. <i>Journal of Differential Equations</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jde.2021.02.048\">https://doi.org/10.1016/j.jde.2021.02.048</a>"},"issue":"5","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","month":"05","department":[{"_id":"JuFi"}],"file":[{"relation":"main_file","checksum":"c630b691fb9e716b02aa6103a9794ec8","file_name":"2021_JourDiffEquations_Cornalba.pdf","success":1,"content_type":"application/pdf","access_level":"open_access","file_id":"9267","date_created":"2021-03-22T07:18:01Z","file_size":473310,"creator":"dernst","date_updated":"2021-03-22T07:18:01Z"}]},{"language":[{"iso":"eng"}],"oa":1,"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","citation":{"mla":"Elek, Oskar, et al. “Robust and Practical Measurement of Volume Transport Parameters in Solid Photo-Polymer Materials for 3D Printing.” <i>Optics Express</i>, vol. 29, no. 5, The Optical Society, 2021, pp. 7568–88, doi:<a href=\"https://doi.org/10.1364/OE.406095\">10.1364/OE.406095</a>.","apa":"Elek, O., Zhang, R., Sumin, D., Myszkowski, K., Bickel, B., Wilkie, A., … Weyrich, T. (2021). Robust and practical measurement of volume transport parameters in solid photo-polymer materials for 3D printing. <i>Optics Express</i>. The Optical Society. <a href=\"https://doi.org/10.1364/OE.406095\">https://doi.org/10.1364/OE.406095</a>","chicago":"Elek, Oskar, Ran Zhang, Denis Sumin, Karol Myszkowski, Bernd Bickel, Alexander Wilkie, Jaroslav Křivánek, and Tim Weyrich. “Robust and Practical Measurement of Volume Transport Parameters in Solid Photo-Polymer Materials for 3D Printing.” <i>Optics Express</i>. The Optical Society, 2021. <a href=\"https://doi.org/10.1364/OE.406095\">https://doi.org/10.1364/OE.406095</a>.","ista":"Elek O, Zhang R, Sumin D, Myszkowski K, Bickel B, Wilkie A, Křivánek J, Weyrich T. 2021. Robust and practical measurement of volume transport parameters in solid photo-polymer materials for 3D printing. Optics Express. 29(5), 7568–7588.","short":"O. Elek, R. Zhang, D. Sumin, K. Myszkowski, B. Bickel, A. Wilkie, J. Křivánek, T. Weyrich, Optics Express 29 (2021) 7568–7588.","ieee":"O. Elek <i>et al.</i>, “Robust and practical measurement of volume transport parameters in solid photo-polymer materials for 3D printing,” <i>Optics Express</i>, vol. 29, no. 5. The Optical Society, pp. 7568–7588, 2021.","ama":"Elek O, Zhang R, Sumin D, et al. Robust and practical measurement of volume transport parameters in solid photo-polymer materials for 3D printing. <i>Optics Express</i>. 2021;29(5):7568-7588. doi:<a href=\"https://doi.org/10.1364/OE.406095\">10.1364/OE.406095</a>"},"issue":"5","month":"03","file":[{"relation":"main_file","checksum":"a9697ad83136c19ad87e46aa2db63cfd","success":1,"file_name":"2021_OpticsExpress_Elek.pdf","access_level":"open_access","content_type":"application/pdf","file_id":"9269","date_created":"2021-03-22T08:15:28Z","file_size":10873700,"creator":"dernst","date_updated":"2021-03-22T08:15:28Z"}],"department":[{"_id":"BeBi"}],"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"abstract":[{"text":"Volumetric light transport is a pervasive physical phenomenon, and therefore its accurate simulation is important for a broad array of disciplines. While suitable mathematical models for computing the transport are now available, obtaining the necessary material parameters needed to drive such simulations is a challenging task: direct measurements of these parameters from material samples are seldom possible. Building on the inverse scattering paradigm, we present a novel measurement approach which indirectly infers the transport parameters from extrinsic observations of multiple-scattered radiance. The novelty of the proposed approach lies in replacing structured illumination with a structured reflector bonded to the sample, and a robust fitting procedure that largely compensates for potential systematic errors in the calibration of the setup. We show the feasibility of our approach by validating simulations of complex 3D compositions of the measured materials against physical prints, using photo-polymer resins. As presented in this paper, our technique yields colorspace data suitable for accurate appearance reproduction in the area of 3D printing. Beyond that, and without fundamental changes to the basic measurement methodology, it could equally well be used to obtain spectral measurements that are useful for other application areas.","lang":"eng"}],"intvolume":"        29","has_accepted_license":"1","file_date_updated":"2021-03-22T08:15:28Z","publication_identifier":{"eissn":["1094-4087"]},"publication_status":"published","oa_version":"Published Version","title":"Robust and practical measurement of volume transport parameters in solid photo-polymer materials for 3D printing","scopus_import":"1","day":"01","author":[{"first_name":"Oskar","last_name":"Elek","full_name":"Elek, Oskar"},{"orcid":"0000-0002-3808-281X","first_name":"Ran","last_name":"Zhang","full_name":"Zhang, Ran","id":"4DDBCEB0-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Denis","full_name":"Sumin, Denis","last_name":"Sumin"},{"last_name":"Myszkowski","full_name":"Myszkowski, Karol","first_name":"Karol"},{"full_name":"Bickel, Bernd","id":"49876194-F248-11E8-B48F-1D18A9856A87","last_name":"Bickel","first_name":"Bernd","orcid":"0000-0001-6511-9385"},{"full_name":"Wilkie, Alexander","last_name":"Wilkie","first_name":"Alexander"},{"last_name":"Křivánek","full_name":"Křivánek, Jaroslav","first_name":"Jaroslav"},{"first_name":"Tim","full_name":"Weyrich, Tim","last_name":"Weyrich"}],"date_created":"2021-03-14T23:01:33Z","article_type":"original","volume":29,"status":"public","publication":"Optics Express","project":[{"_id":"2508E324-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","name":"Distributed 3D Object Design","grant_number":"642841"},{"call_identifier":"H2020","name":"MATERIALIZABLE: Intelligent fabrication-oriented Computational Design and Modeling","grant_number":"715767","_id":"24F9549A-B435-11E9-9278-68D0E5697425"}],"acknowledgement":"H2020 Marie Skłodowska-Curie Actions (642841); European Research Council (715767); Grantová Agentura České Republiky (16-08111S, 16-18964S); Univerzita Karlova v Praze (SVV-2017-260452); Engineering and Physical Sciences Research Council (EP/K023578/1).\r\nWe are grateful to Stratasys Ltd. for access to the voxel-level print interface of the J750\r\nmachine.","date_published":"2021-03-01T00:00:00Z","ec_funded":1,"external_id":{"isi":["000624968100103"]},"isi":1,"year":"2021","ddc":["000"],"page":"7568-7588","quality_controlled":"1","publisher":"The Optical Society","article_processing_charge":"No","doi":"10.1364/OE.406095","type":"journal_article","_id":"9241","date_updated":"2023-08-07T14:11:57Z"},{"quality_controlled":"1","main_file_link":[{"url":"https://arxiv.org/abs/2010.05356","open_access":"1"}],"publisher":"American Physical Society","article_processing_charge":"No","doi":"10.1103/PhysRevA.103.023708","type":"journal_article","_id":"9242","date_updated":"2023-08-07T14:11:18Z","status":"public","publication":"Physical Review A","date_published":"2021-02-11T00:00:00Z","acknowledgement":"I thank Prof. Shabir Barzanjeh and Dr. Ulrich Vogl for the fruitful discussions.\r\n","external_id":{"arxiv":["2010.05356"],"isi":["000617037900013"]},"isi":1,"year":"2021","abstract":[{"text":"In the recent years important experimental advances in resonant electro-optic modulators as high-efficiency sources for coherent frequency combs and as devices for quantum information transfer have been realized, where strong optical and microwave mode coupling were achieved. These features suggest electro-optic-based devices as candidates for entangled optical frequency comb sources. In the present work, I study the generation of entangled optical frequency combs in millimeter-sized resonant electro-optic modulators. These devices profit from the experimentally proven advantages such as nearly constant optical free spectral ranges over several gigahertz, and high optical and microwave quality factors. The generation of frequency multiplexed quantum channels with spectral bandwidth in the MHz range for conservative parameter values paves the way towards novel uses in long-distance hybrid quantum networks, quantum key distribution, enhanced optical metrology, and quantum computing.","lang":"eng"}],"intvolume":"       103","publication_identifier":{"issn":["2469-9926"],"eissn":["2469-9934"]},"publication_status":"published","title":"Frequency-multiplexed hybrid optical entangled source based on the Pockels effect","oa_version":"Preprint","scopus_import":"1","day":"11","author":[{"last_name":"Rueda Sanchez","full_name":"Rueda Sanchez, Alfredo R","id":"3B82B0F8-F248-11E8-B48F-1D18A9856A87","first_name":"Alfredo R","orcid":"0000-0001-6249-5860"}],"date_created":"2021-03-14T23:01:33Z","article_type":"original","volume":103,"language":[{"iso":"eng"}],"oa":1,"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","citation":{"apa":"Rueda Sanchez, A. R. (2021). Frequency-multiplexed hybrid optical entangled source based on the Pockels effect. <i>Physical Review A</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevA.103.023708\">https://doi.org/10.1103/PhysRevA.103.023708</a>","mla":"Rueda Sanchez, Alfredo R. “Frequency-Multiplexed Hybrid Optical Entangled Source Based on the Pockels Effect.” <i>Physical Review A</i>, vol. 103, no. 2, 023708, American Physical Society, 2021, doi:<a href=\"https://doi.org/10.1103/PhysRevA.103.023708\">10.1103/PhysRevA.103.023708</a>.","chicago":"Rueda Sanchez, Alfredo R. “Frequency-Multiplexed Hybrid Optical Entangled Source Based on the Pockels Effect.” <i>Physical Review A</i>. American Physical Society, 2021. <a href=\"https://doi.org/10.1103/PhysRevA.103.023708\">https://doi.org/10.1103/PhysRevA.103.023708</a>.","ista":"Rueda Sanchez AR. 2021. Frequency-multiplexed hybrid optical entangled source based on the Pockels effect. Physical Review A. 103(2), 023708.","ieee":"A. R. Rueda Sanchez, “Frequency-multiplexed hybrid optical entangled source based on the Pockels effect,” <i>Physical Review A</i>, vol. 103, no. 2. American Physical Society, 2021.","short":"A.R. Rueda Sanchez, Physical Review A 103 (2021).","ama":"Rueda Sanchez AR. Frequency-multiplexed hybrid optical entangled source based on the Pockels effect. <i>Physical Review A</i>. 2021;103(2). doi:<a href=\"https://doi.org/10.1103/PhysRevA.103.023708\">10.1103/PhysRevA.103.023708</a>"},"issue":"2","month":"02","arxiv":1,"article_number":"023708","department":[{"_id":"JoFi"}]},{"doi":"10.7554/eLife.61525","article_processing_charge":"No","publisher":"eLife Sciences Publications","date_updated":"2023-08-07T14:10:50Z","_id":"9243","type":"journal_article","ddc":["570"],"quality_controlled":"1","isi":1,"year":"2021","external_id":{"isi":["000627596400001"]},"project":[{"name":"Self-Organization of the Bacterial Cell","grant_number":"679239","call_identifier":"H2020","_id":"2595697A-B435-11E9-9278-68D0E5697425"},{"grant_number":"ALTF 2015-1163","name":"Synthesis of bacterial cell wall","_id":"2596EAB6-B435-11E9-9278-68D0E5697425"},{"grant_number":"LT000824/2016","name":"Reconstitution of bacterial cell wall sythesis","_id":"259B655A-B435-11E9-9278-68D0E5697425"}],"publication":"eLife","status":"public","ec_funded":1,"date_published":"2021-02-24T00:00:00Z","acknowledgement":"We thank Alexander Egan (Newcastle University) for purified proteins LpoB(sol) and LpoPPa(sol), Federico Corona (Newcastle University) for purified MepM, and Oliver Birkholz and Jacob Piehler (Department of Biology and Center of Cellular Nanoanalytics, University of Osnabru¨ ck) for their help with PBP1B reconstitution into polymer-SLBs and initial guidance on single particle tracking. We also acknowledge Christian P Richter and Changjiang You (Department of Biology and Center of Cellular Nanoanalytics, University of Osnabru¨ ck) for providing SLIMfast software and tris-DODA-NTA reagent, respectively. This work was funded by the BBSRC grant BB/R017409/1 (to WV), the European Research Council through grant ERC-2015-StG-679239 (to ML), and long-term fellowships HFSP LT 000824/2016-L4 and EMBO ALTF 1163–2015 (to NB). ","author":[{"first_name":"Víctor M.","full_name":"Hernández-Rocamora, Víctor M.","last_name":"Hernández-Rocamora"},{"full_name":"Baranova, Natalia S.","id":"38661662-F248-11E8-B48F-1D18A9856A87","last_name":"Baranova","orcid":"0000-0002-3086-9124","first_name":"Natalia S."},{"first_name":"Katharina","last_name":"Peters","full_name":"Peters, Katharina"},{"first_name":"Eefjan","last_name":"Breukink","full_name":"Breukink, Eefjan"},{"id":"462D4284-F248-11E8-B48F-1D18A9856A87","full_name":"Loose, Martin","last_name":"Loose","first_name":"Martin","orcid":"0000-0001-7309-9724"},{"first_name":"Waldemar","last_name":"Vollmer","full_name":"Vollmer, Waldemar"}],"day":"24","scopus_import":"1","title":"Real time monitoring of peptidoglycan synthesis by membrane-reconstituted penicillin binding proteins","oa_version":"Published Version","volume":10,"article_type":"original","date_created":"2021-03-14T23:01:33Z","has_accepted_license":"1","abstract":[{"lang":"eng","text":"Peptidoglycan is an essential component of the bacterial cell envelope that surrounds the cytoplasmic membrane to protect the cell from osmotic lysis. Important antibiotics such as β-lactams and glycopeptides target peptidoglycan biosynthesis. Class A penicillin-binding proteins (PBPs) are bifunctional membrane-bound peptidoglycan synthases that polymerize glycan chains and connect adjacent stem peptides by transpeptidation. How these enzymes work in their physiological membrane environment is poorly understood. Here, we developed a novel Förster resonance energy transfer-based assay to follow in real time both reactions of class A PBPs reconstituted in liposomes or supported lipid bilayers and applied this assay with PBP1B homologues from Escherichia coli, Pseudomonas aeruginosa, and Acinetobacter baumannii in the presence or absence of their cognate lipoprotein activator. Our assay will allow unravelling the mechanisms of peptidoglycan synthesis in a lipid-bilayer environment and can be further developed to be used for high-throughput screening for new antimicrobials."}],"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"intvolume":"        10","publication_status":"published","publication_identifier":{"eissn":["2050-084X"]},"file_date_updated":"2021-03-22T07:36:08Z","month":"02","department":[{"_id":"MaLo"}],"article_number":"1-32","file":[{"file_name":"2021_eLife_HernandezRocamora.pdf","success":1,"content_type":"application/pdf","access_level":"open_access","relation":"main_file","checksum":"79897a09bfecd9914d39c4aea2841855","file_size":2314698,"date_created":"2021-03-22T07:36:08Z","date_updated":"2021-03-22T07:36:08Z","creator":"dernst","file_id":"9268"}],"oa":1,"language":[{"iso":"eng"}],"citation":{"ista":"Hernández-Rocamora VM, Baranova NS, Peters K, Breukink E, Loose M, Vollmer W. 2021. Real time monitoring of peptidoglycan synthesis by membrane-reconstituted penicillin binding proteins. eLife. 10, 1–32.","chicago":"Hernández-Rocamora, Víctor M., Natalia S. Baranova, Katharina Peters, Eefjan Breukink, Martin Loose, and Waldemar Vollmer. “Real Time Monitoring of Peptidoglycan Synthesis by Membrane-Reconstituted Penicillin Binding Proteins.” <i>ELife</i>. eLife Sciences Publications, 2021. <a href=\"https://doi.org/10.7554/eLife.61525\">https://doi.org/10.7554/eLife.61525</a>.","mla":"Hernández-Rocamora, Víctor M., et al. “Real Time Monitoring of Peptidoglycan Synthesis by Membrane-Reconstituted Penicillin Binding Proteins.” <i>ELife</i>, vol. 10, 1–32, eLife Sciences Publications, 2021, doi:<a href=\"https://doi.org/10.7554/eLife.61525\">10.7554/eLife.61525</a>.","apa":"Hernández-Rocamora, V. M., Baranova, N. S., Peters, K., Breukink, E., Loose, M., &#38; Vollmer, W. (2021). Real time monitoring of peptidoglycan synthesis by membrane-reconstituted penicillin binding proteins. <i>ELife</i>. eLife Sciences Publications. <a href=\"https://doi.org/10.7554/eLife.61525\">https://doi.org/10.7554/eLife.61525</a>","ama":"Hernández-Rocamora VM, Baranova NS, Peters K, Breukink E, Loose M, Vollmer W. Real time monitoring of peptidoglycan synthesis by membrane-reconstituted penicillin binding proteins. <i>eLife</i>. 2021;10. doi:<a href=\"https://doi.org/10.7554/eLife.61525\">10.7554/eLife.61525</a>","short":"V.M. Hernández-Rocamora, N.S. Baranova, K. Peters, E. Breukink, M. Loose, W. Vollmer, ELife 10 (2021).","ieee":"V. M. Hernández-Rocamora, N. S. Baranova, K. Peters, E. Breukink, M. Loose, and W. Vollmer, “Real time monitoring of peptidoglycan synthesis by membrane-reconstituted penicillin binding proteins,” <i>eLife</i>, vol. 10. eLife Sciences Publications, 2021."},"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8"},{"month":"02","department":[{"_id":"EdHa"}],"file":[{"date_created":"2021-03-22T08:50:33Z","file_size":9259690,"creator":"dernst","date_updated":"2021-03-22T08:50:33Z","file_id":"9271","success":1,"file_name":"2021_eLife_Hankeova.pdf","access_level":"open_access","content_type":"application/pdf","relation":"main_file","checksum":"20ccf4dfe46c48cf986794c8bf4fd1cb"}],"article_number":"e60916","oa":1,"language":[{"iso":"eng"}],"citation":{"mla":"Hankeova, Simona, et al. “DUCT Reveals Architectural Mechanisms Contributing to Bile Duct Recovery in a Mouse Model for Alagille Syndrome.” <i>ELife</i>, vol. 10, e60916, eLife Sciences Publications, 2021, doi:<a href=\"https://doi.org/10.7554/eLife.60916\">10.7554/eLife.60916</a>.","apa":"Hankeova, S., Salplachta, J., Zikmund, T., Kavkova, M., Van Hul, N., Brinek, A., … Andersson, E. R. (2021). DUCT reveals architectural mechanisms contributing to bile duct recovery in a mouse model for alagille syndrome. <i>ELife</i>. eLife Sciences Publications. <a href=\"https://doi.org/10.7554/eLife.60916\">https://doi.org/10.7554/eLife.60916</a>","chicago":"Hankeova, Simona, Jakub Salplachta, Tomas Zikmund, Michaela Kavkova, Noémi Van Hul, Adam Brinek, Veronika Smekalova, et al. “DUCT Reveals Architectural Mechanisms Contributing to Bile Duct Recovery in a Mouse Model for Alagille Syndrome.” <i>ELife</i>. eLife Sciences Publications, 2021. <a href=\"https://doi.org/10.7554/eLife.60916\">https://doi.org/10.7554/eLife.60916</a>.","ista":"Hankeova S, Salplachta J, Zikmund T, Kavkova M, Van Hul N, Brinek A, Smekalova V, Laznovsky J, Dawit F, Jaros J, Bryja V, Lendahl U, Ellis E, Nemeth A, Fischler B, Hannezo EB, Kaiser J, Andersson ER. 2021. DUCT reveals architectural mechanisms contributing to bile duct recovery in a mouse model for alagille syndrome. eLife. 10, e60916.","short":"S. Hankeova, J. Salplachta, T. Zikmund, M. Kavkova, N. Van Hul, A. Brinek, V. Smekalova, J. Laznovsky, F. Dawit, J. Jaros, V. Bryja, U. Lendahl, E. Ellis, A. Nemeth, B. Fischler, E.B. Hannezo, J. Kaiser, E.R. Andersson, ELife 10 (2021).","ieee":"S. Hankeova <i>et al.</i>, “DUCT reveals architectural mechanisms contributing to bile duct recovery in a mouse model for alagille syndrome,” <i>eLife</i>, vol. 10. eLife Sciences Publications, 2021.","ama":"Hankeova S, Salplachta J, Zikmund T, et al. DUCT reveals architectural mechanisms contributing to bile duct recovery in a mouse model for alagille syndrome. <i>eLife</i>. 2021;10. doi:<a href=\"https://doi.org/10.7554/eLife.60916\">10.7554/eLife.60916</a>"},"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","scopus_import":"1","day":"26","author":[{"first_name":"Simona","last_name":"Hankeova","full_name":"Hankeova, Simona"},{"last_name":"Salplachta","full_name":"Salplachta, Jakub","first_name":"Jakub"},{"last_name":"Zikmund","full_name":"Zikmund, Tomas","first_name":"Tomas"},{"full_name":"Kavkova, Michaela","last_name":"Kavkova","first_name":"Michaela"},{"first_name":"Noémi","full_name":"Van Hul, Noémi","last_name":"Van Hul"},{"last_name":"Brinek","full_name":"Brinek, Adam","first_name":"Adam"},{"last_name":"Smekalova","full_name":"Smekalova, Veronika","first_name":"Veronika"},{"full_name":"Laznovsky, Jakub","last_name":"Laznovsky","first_name":"Jakub"},{"last_name":"Dawit","full_name":"Dawit, Feven","first_name":"Feven"},{"first_name":"Josef","last_name":"Jaros","full_name":"Jaros, Josef"},{"first_name":"Vítězslav","last_name":"Bryja","full_name":"Bryja, Vítězslav"},{"first_name":"Urban","full_name":"Lendahl, Urban","last_name":"Lendahl"},{"first_name":"Ewa","full_name":"Ellis, Ewa","last_name":"Ellis"},{"first_name":"Antal","full_name":"Nemeth, Antal","last_name":"Nemeth"},{"last_name":"Fischler","full_name":"Fischler, Björn","first_name":"Björn"},{"orcid":"0000-0001-6005-1561","first_name":"Edouard B","full_name":"Hannezo, Edouard B","id":"3A9DB764-F248-11E8-B48F-1D18A9856A87","last_name":"Hannezo"},{"first_name":"Jozef","last_name":"Kaiser","full_name":"Kaiser, Jozef"},{"full_name":"Andersson, Emma Rachel","last_name":"Andersson","first_name":"Emma Rachel"}],"title":"DUCT reveals architectural mechanisms contributing to bile duct recovery in a mouse model for alagille syndrome","oa_version":"Published Version","volume":10,"date_created":"2021-03-14T23:01:34Z","article_type":"original","has_accepted_license":"1","intvolume":"        10","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"abstract":[{"lang":"eng","text":"Organ function depends on tissues adopting the correct architecture. However, insights into organ architecture are currently hampered by an absence of standardized quantitative 3D analysis. We aimed to develop a robust technology to visualize, digitalize, and segment the architecture of two tubular systems in 3D: double resin casting micro computed tomography (DUCT). As proof of principle, we applied DUCT to a mouse model for Alagille syndrome (Jag1Ndr/Ndr mice), characterized by intrahepatic bile duct paucity, that can spontaneously generate a biliary system in adulthood. DUCT identified increased central biliary branching and peripheral bile duct tortuosity as two compensatory processes occurring in distinct regions of Jag1Ndr/Ndr liver, leading to full reconstitution of wild-type biliary volume and phenotypic recovery. DUCT is thus a powerful new technology for 3D analysis, which can reveal novel phenotypes and provide a standardized method of defining liver architecture in mouse models."}],"file_date_updated":"2021-03-22T08:50:33Z","publication_identifier":{"eissn":["2050084X"]},"publication_status":"published","year":"2021","isi":1,"external_id":{"isi":["000625357100001"],"pmid":["33635272"]},"publication":"eLife","status":"public","project":[{"grant_number":"851288","name":"Design Principles of Branching Morphogenesis","call_identifier":"H2020","_id":"05943252-7A3F-11EA-A408-12923DDC885E"}],"ec_funded":1,"pmid":1,"date_published":"2021-02-26T00:00:00Z","acknowledgement":"Work in ERA lab is supported by the Swedish Research Council, the Center of Innovative Medicine (CIMED) Grant, Karolinska Institutet, and the Heart and Lung Foundation, and\r\nthe Daniel Alagille Award from the European Association for the Study of the Liver. One project in ERA lab is funded by ModeRNA, unrelated to this project. The funders have no role in the design or interpretation of the work. SH has been supported by a KI-MU PhD student program, and by a Wera Ekstro¨m Foundation Scholarship. We are grateful for support from Tornspiran foundation to NVH. JK: This research was carried out under the project CEITEC 2020 (LQ1601) with financial support from the Ministry of Education, Youth and Sports of the Czech Republic under the National Sustainability Programme II and CzechNanoLab Research Infrastructure supported by MEYS CR (LM2018110) . UL: The financial support from the Swedish Research Council and ICMC (Integrated CardioMetabolic Center) is acknowledged. JJ: The work was supported by the Grant Agency of Masaryk University (project no. MUNI/A/1565/2018). We thank Kari Huppert and Stacey Huppert for their expertise and help regarding bile duct cannulation and their laboratory hospitality. We also thank Nadja Schultz and Charlotte L Mattsson for their help with common bile duct cannulation. We thank Daniel Holl for his help with trachea cannulation. We thank Nikos Papadogiannakis for his assistance with mild Alagille biopsy samples and discussion. We thank Karolinska Biomedicum Imaging Core, especially Shigeaki Kanatani for his help with image analysis. We thank Jan Masek and Carolina Gutierrez for their scientific input in manuscript writing. We thank Peter Ranefall and the BioImage Informatics (SciLife national facility) for their help writing parts of the MATLAB pipeline.\r\nThe TROMA-III antibody developed by Rolf Kemler was obtained from the Developmental Studies Hybridoma (DSHB) Bank developed under the auspices of NICHD and maintained by The University of Iowa, Department of Biological Sciences, Iowa City, IA52242. We thank Goncalo M Brito for all illustrations. This work was supported by the European Union (European Research Council Starting grant 851288 to E.H.).","article_processing_charge":"No","doi":"10.7554/eLife.60916","publisher":"eLife Sciences Publications","_id":"9244","date_updated":"2023-08-07T14:12:54Z","type":"journal_article","ddc":["570"],"quality_controlled":"1"},{"type":"book_chapter","date_updated":"2022-06-03T10:57:55Z","_id":"9245","editor":[{"first_name":"Roland","last_name":"Dosch","full_name":"Dosch, Roland"}],"publisher":"Humana","doi":"10.1007/978-1-0716-0970-5_10","alternative_title":["Methods in Molecular Biology"],"article_processing_charge":"No","quality_controlled":"1","page":"117-128","keyword":["Tissue tension","Morphogenesis","Laser ablation","Zebrafish folliculogenesis","Granulosa cells"],"external_id":{"pmid":["33606227"]},"year":"2021","acknowledgement":"We thank Prof. Masazumi Tada and Roland Dosch for providing transgenic zebrafish lines, the Heisenberg lab for technical assistance and feedback on the manuscript, and the Bioimaging and Fish facilities of IST Austria for continuous support. This work was funded by an ERC advanced grant (MECSPEC to C.-P.H.).","date_published":"2021-02-20T00:00:00Z","pmid":1,"ec_funded":1,"project":[{"_id":"260F1432-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","grant_number":"742573","name":"Interaction and feedback between cell mechanics and fate specification in vertebrate gastrulation"}],"publication":"Germline Development in the Zebrafish","status":"public","date_created":"2021-03-14T23:01:34Z","volume":2218,"title":"Quantifying tissue tension in the granulosa layer after laser surgery","oa_version":"None","author":[{"first_name":"Peng","orcid":"0000-0002-5419-7756","id":"4AB6C7D0-F248-11E8-B48F-1D18A9856A87","full_name":"Xia, Peng","last_name":"Xia"},{"orcid":"0000-0002-0912-4566","first_name":"Carl-Philipp J","last_name":"Heisenberg","full_name":"Heisenberg, Carl-Philipp J","id":"39427864-F248-11E8-B48F-1D18A9856A87"}],"day":"20","scopus_import":"1","publication_identifier":{"eissn":["1940-6029"],"eisbn":["978-1-0716-0970-5"],"isbn":["978-1-0716-0969-9"],"issn":["1064-3745"]},"publication_status":"published","abstract":[{"text":"Tissue morphogenesis is driven by mechanical forces triggering cell movements and shape changes. Quantitatively measuring tension within tissues is of great importance for understanding the role of mechanical signals acting on the cell and tissue level during morphogenesis. Here we introduce laser ablation as a useful tool to probe tissue tension within the granulosa layer, an epithelial monolayer of somatic cells that surround the zebrafish female gamete during folliculogenesis. We describe in detail how to isolate follicles, mount samples, perform laser surgery, and analyze the data.","lang":"eng"}],"intvolume":"      2218","acknowledged_ssus":[{"_id":"Bio"},{"_id":"PreCl"}],"department":[{"_id":"CaHe"}],"month":"02","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"ama":"Xia P, Heisenberg C-PJ. Quantifying tissue tension in the granulosa layer after laser surgery. In: Dosch R, ed. <i>Germline Development in the Zebrafish</i>. Vol 2218. Humana; 2021:117-128. doi:<a href=\"https://doi.org/10.1007/978-1-0716-0970-5_10\">10.1007/978-1-0716-0970-5_10</a>","short":"P. Xia, C.-P.J. Heisenberg, in:, R. Dosch (Ed.), Germline Development in the Zebrafish, Humana, 2021, pp. 117–128.","ieee":"P. Xia and C.-P. J. Heisenberg, “Quantifying tissue tension in the granulosa layer after laser surgery,” in <i>Germline Development in the Zebrafish</i>, vol. 2218, R. Dosch, Ed. Humana, 2021, pp. 117–128.","ista":"Xia P, Heisenberg C-PJ. 2021.Quantifying tissue tension in the granulosa layer after laser surgery. In: Germline Development in the Zebrafish. Methods in Molecular Biology, vol. 2218, 117–128.","chicago":"Xia, Peng, and Carl-Philipp J Heisenberg. “Quantifying Tissue Tension in the Granulosa Layer after Laser Surgery.” In <i>Germline Development in the Zebrafish</i>, edited by Roland Dosch, 2218:117–28. Humana, 2021. <a href=\"https://doi.org/10.1007/978-1-0716-0970-5_10\">https://doi.org/10.1007/978-1-0716-0970-5_10</a>.","mla":"Xia, Peng, and Carl-Philipp J. Heisenberg. “Quantifying Tissue Tension in the Granulosa Layer after Laser Surgery.” <i>Germline Development in the Zebrafish</i>, edited by Roland Dosch, vol. 2218, Humana, 2021, pp. 117–28, doi:<a href=\"https://doi.org/10.1007/978-1-0716-0970-5_10\">10.1007/978-1-0716-0970-5_10</a>.","apa":"Xia, P., &#38; Heisenberg, C.-P. J. (2021). Quantifying tissue tension in the granulosa layer after laser surgery. In R. Dosch (Ed.), <i>Germline Development in the Zebrafish</i> (Vol. 2218, pp. 117–128). Humana. <a href=\"https://doi.org/10.1007/978-1-0716-0970-5_10\">https://doi.org/10.1007/978-1-0716-0970-5_10</a>"},"language":[{"iso":"eng"}]},{"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"abstract":[{"lang":"eng","text":"We consider the Fröhlich Hamiltonian in a mean-field limit where many bosonic particles weakly couple to the quantized phonon field. For large particle numbers and a suitably small coupling, we show that the dynamics of the system is approximately described by the Landau–Pekar equations. These describe a Bose–Einstein condensate interacting with a classical polarization field, whose dynamics is effected by the condensate, i.e., the back-reaction of the phonons that are created by the particles during the time evolution is of leading order."}],"intvolume":"       240","has_accepted_license":"1","file_date_updated":"2021-03-22T08:31:29Z","publication_identifier":{"issn":["00039527"],"eissn":["14320673"]},"publication_status":"published","oa_version":"Published Version","title":"Derivation of the Landau–Pekar equations in a many-body mean-field limit","scopus_import":"1","day":"26","author":[{"orcid":"0000-0002-0495-6822","first_name":"Nikolai K","last_name":"Leopold","full_name":"Leopold, Nikolai K","id":"4BC40BEC-F248-11E8-B48F-1D18A9856A87"},{"first_name":"David Johannes","full_name":"Mitrouskas, David Johannes","id":"cbddacee-2b11-11eb-a02e-a2e14d04e52d","last_name":"Mitrouskas"},{"last_name":"Seiringer","full_name":"Seiringer, Robert","id":"4AFD0470-F248-11E8-B48F-1D18A9856A87","first_name":"Robert","orcid":"0000-0002-6781-0521"}],"date_created":"2021-03-14T23:01:34Z","article_type":"original","volume":240,"language":[{"iso":"eng"}],"oa":1,"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","citation":{"mla":"Leopold, Nikolai K., et al. “Derivation of the Landau–Pekar Equations in a Many-Body Mean-Field Limit.” <i>Archive for Rational Mechanics and Analysis</i>, vol. 240, Springer Nature, 2021, pp. 383–417, doi:<a href=\"https://doi.org/10.1007/s00205-021-01616-9\">10.1007/s00205-021-01616-9</a>.","apa":"Leopold, N. K., Mitrouskas, D. J., &#38; Seiringer, R. (2021). Derivation of the Landau–Pekar equations in a many-body mean-field limit. <i>Archive for Rational Mechanics and Analysis</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00205-021-01616-9\">https://doi.org/10.1007/s00205-021-01616-9</a>","ista":"Leopold NK, Mitrouskas DJ, Seiringer R. 2021. Derivation of the Landau–Pekar equations in a many-body mean-field limit. Archive for Rational Mechanics and Analysis. 240, 383–417.","chicago":"Leopold, Nikolai K, David Johannes Mitrouskas, and Robert Seiringer. “Derivation of the Landau–Pekar Equations in a Many-Body Mean-Field Limit.” <i>Archive for Rational Mechanics and Analysis</i>. Springer Nature, 2021. <a href=\"https://doi.org/10.1007/s00205-021-01616-9\">https://doi.org/10.1007/s00205-021-01616-9</a>.","short":"N.K. Leopold, D.J. Mitrouskas, R. Seiringer, Archive for Rational Mechanics and Analysis 240 (2021) 383–417.","ieee":"N. K. Leopold, D. J. Mitrouskas, and R. Seiringer, “Derivation of the Landau–Pekar equations in a many-body mean-field limit,” <i>Archive for Rational Mechanics and Analysis</i>, vol. 240. Springer Nature, pp. 383–417, 2021.","ama":"Leopold NK, Mitrouskas DJ, Seiringer R. Derivation of the Landau–Pekar equations in a many-body mean-field limit. <i>Archive for Rational Mechanics and Analysis</i>. 2021;240:383-417. doi:<a href=\"https://doi.org/10.1007/s00205-021-01616-9\">10.1007/s00205-021-01616-9</a>"},"arxiv":1,"month":"02","file":[{"date_created":"2021-03-22T08:31:29Z","file_size":558006,"creator":"dernst","date_updated":"2021-03-22T08:31:29Z","file_id":"9270","file_name":"2021_ArchRationalMechAnal_Leopold.pdf","success":1,"content_type":"application/pdf","access_level":"open_access","relation":"main_file","checksum":"23449e44dc5132501a5c86e70638800f"}],"department":[{"_id":"RoSe"}],"ddc":["510"],"page":"383-417","quality_controlled":"1","publisher":"Springer Nature","article_processing_charge":"No","doi":"10.1007/s00205-021-01616-9","type":"journal_article","_id":"9246","date_updated":"2023-08-07T14:12:27Z","publication":"Archive for Rational Mechanics and Analysis","status":"public","project":[{"call_identifier":"H2020","name":"Analysis of quantum many-body systems","grant_number":"694227","_id":"25C6DC12-B435-11E9-9278-68D0E5697425"}],"acknowledgement":"Financial support by the European Research Council (ERC) under the\r\nEuropean Union’s Horizon 2020 research and innovation programme (Grant Agreement\r\nNo 694227; N.L and R.S.), the SNSF Eccellenza Project PCEFP2 181153 (N.L) and the\r\nDeutsche Forschungsgemeinschaft (DFG) through the Research TrainingGroup 1838: Spectral\r\nTheory and Dynamics of Quantum Systems (D.M.) is gratefully acknowledged. N.L.\r\ngratefully acknowledges support from the NCCRSwissMAP and would like to thank Simone\r\nRademacher and Benjamin Schlein for interesting discussions about the time-evolution of\r\nthe polaron at strong coupling. D.M. thanks Marcel Griesemer and Andreas Wünsch for\r\nextensive discussions about the Fröhlich polaron.","date_published":"2021-02-26T00:00:00Z","ec_funded":1,"external_id":{"isi":["000622226200001"],"arxiv":["2001.03993"]},"isi":1,"year":"2021"},{"publication_status":"published","publication_identifier":{"eissn":["1755-4349"],"issn":["1755-4330"]},"file_date_updated":"2021-09-16T22:30:03Z","intvolume":"        13","abstract":[{"text":"Aprotic alkali metal–O2 batteries face two major obstacles to their chemistry occurring efficiently, the insulating nature of the formed alkali superoxides/peroxides and parasitic reactions that are caused by the highly reactive singlet oxygen (1O2). Redox mediators are recognized to be key for improving rechargeability. However, it is unclear how they affect 1O2 formation, which hinders strategies for their improvement. Here we clarify the mechanism of mediated peroxide and superoxide oxidation and thus explain how redox mediators either enhance or suppress 1O2 formation. We show that charging commences with peroxide oxidation to a superoxide intermediate and that redox potentials above ~3.5 V versus Li/Li+ drive 1O2 evolution from superoxide oxidation, while disproportionation always generates some 1O2. We find that 1O2 suppression requires oxidation to be faster than the generation of 1O2 from disproportionation. Oxidation rates decrease with growing driving force following Marcus inverted-region behaviour, establishing a region of maximum rate.","lang":"eng"}],"acknowledged_ssus":[{"_id":"M-Shop"}],"has_accepted_license":"1","article_type":"original","date_created":"2021-03-16T11:12:20Z","volume":13,"title":"Mechanism of mediated alkali peroxide oxidation and triplet versus singlet oxygen formation","oa_version":"Submitted Version","author":[{"full_name":"Petit, Yann K.","last_name":"Petit","first_name":"Yann K."},{"first_name":"Eléonore","full_name":"Mourad, Eléonore","last_name":"Mourad"},{"last_name":"Prehal","full_name":"Prehal, Christian","first_name":"Christian"},{"first_name":"Christian","last_name":"Leypold","full_name":"Leypold, Christian"},{"first_name":"Andreas","last_name":"Windischbacher","full_name":"Windischbacher, Andreas"},{"first_name":"Daniel","last_name":"Mijailovic","full_name":"Mijailovic, Daniel"},{"first_name":"Christian","last_name":"Slugovc","full_name":"Slugovc, Christian"},{"last_name":"Borisov","full_name":"Borisov, Sergey M.","first_name":"Sergey M."},{"full_name":"Zojer, Egbert","last_name":"Zojer","first_name":"Egbert"},{"last_name":"Brutti","full_name":"Brutti, Sergio","first_name":"Sergio"},{"first_name":"Olivier","full_name":"Fontaine, Olivier","last_name":"Fontaine"},{"id":"A8CA28E6-CE23-11E9-AD2D-EC27E6697425","full_name":"Freunberger, Stefan Alexander","last_name":"Freunberger","orcid":"0000-0003-2902-5319","first_name":"Stefan Alexander"}],"day":"15","scopus_import":"1","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","issue":"5","citation":{"ama":"Petit YK, Mourad E, Prehal C, et al. Mechanism of mediated alkali peroxide oxidation and triplet versus singlet oxygen formation. <i>Nature Chemistry</i>. 2021;13(5):465-471. doi:<a href=\"https://doi.org/10.1038/s41557-021-00643-z\">10.1038/s41557-021-00643-z</a>","short":"Y.K. Petit, E. Mourad, C. Prehal, C. Leypold, A. Windischbacher, D. Mijailovic, C. Slugovc, S.M. Borisov, E. Zojer, S. Brutti, O. Fontaine, S.A. Freunberger, Nature Chemistry 13 (2021) 465–471.","ieee":"Y. K. Petit <i>et al.</i>, “Mechanism of mediated alkali peroxide oxidation and triplet versus singlet oxygen formation,” <i>Nature Chemistry</i>, vol. 13, no. 5. Springer Nature, pp. 465–471, 2021.","ista":"Petit YK, Mourad E, Prehal C, Leypold C, Windischbacher A, Mijailovic D, Slugovc C, Borisov SM, Zojer E, Brutti S, Fontaine O, Freunberger SA. 2021. Mechanism of mediated alkali peroxide oxidation and triplet versus singlet oxygen formation. Nature Chemistry. 13(5), 465–471.","chicago":"Petit, Yann K., Eléonore Mourad, Christian Prehal, Christian Leypold, Andreas Windischbacher, Daniel Mijailovic, Christian Slugovc, et al. “Mechanism of Mediated Alkali Peroxide Oxidation and Triplet versus Singlet Oxygen Formation.” <i>Nature Chemistry</i>. Springer Nature, 2021. <a href=\"https://doi.org/10.1038/s41557-021-00643-z\">https://doi.org/10.1038/s41557-021-00643-z</a>.","mla":"Petit, Yann K., et al. “Mechanism of Mediated Alkali Peroxide Oxidation and Triplet versus Singlet Oxygen Formation.” <i>Nature Chemistry</i>, vol. 13, no. 5, Springer Nature, 2021, pp. 465–71, doi:<a href=\"https://doi.org/10.1038/s41557-021-00643-z\">10.1038/s41557-021-00643-z</a>.","apa":"Petit, Y. K., Mourad, E., Prehal, C., Leypold, C., Windischbacher, A., Mijailovic, D., … Freunberger, S. A. (2021). Mechanism of mediated alkali peroxide oxidation and triplet versus singlet oxygen formation. <i>Nature Chemistry</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41557-021-00643-z\">https://doi.org/10.1038/s41557-021-00643-z</a>"},"language":[{"iso":"eng"}],"oa":1,"file":[{"file_size":1811448,"date_created":"2021-03-22T11:46:00Z","creator":"dernst","date_updated":"2021-09-16T22:30:03Z","embargo":"2021-09-15","file_id":"9276","file_name":"2021_NatureChem_Petit_acceptedVersion.pdf","access_level":"open_access","content_type":"application/pdf","relation":"main_file","checksum":"3ee3f8dd79ed1b7bb0929fce184c8012"}],"department":[{"_id":"StFr"}],"month":"03","quality_controlled":"1","ddc":["540"],"page":"465-471","type":"journal_article","date_updated":"2023-09-05T15:34:44Z","_id":"9250","publisher":"Springer Nature","doi":"10.1038/s41557-021-00643-z","article_processing_charge":"No","acknowledgement":"S.A.F. is indebted to the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (grant agreement No. 636069) as well as IST Austria. O.F thanks the French National Research Agency (STORE-EX Labex Project ANR-10-LABX-76-01). We thank EL-Cell GmbH (Hamburg, Germany) for the pressure test cell. We thank R. Saf for help with the mass spectrometry, J. Schlegl for manufacturing instrumentation, M. Winkler of Acib GmbH, G. Strohmeier and R. Fürst for HPLC measurements and S. Mondal and S. Stadlbauer for kinetic measurements.","date_published":"2021-03-15T00:00:00Z","pmid":1,"publication":"Nature Chemistry","status":"public","keyword":["General Chemistry","General Chemical Engineering"],"external_id":{"pmid":["33723377"],"isi":["000629296400001"]},"year":"2021","isi":1}]