@article{8743,
  abstract     = {Montane cloud forests are areas of high endemism, and are one of the more vulnerable terrestrial ecosystems to climate change. Thus, understanding how they both contribute to the generation of biodiversity, and will respond to ongoing climate change, are important and related challenges. The widely accepted model for montane cloud forest dynamics involves upslope forcing of their range limits with global climate warming. However, limited climate data provides some support for an alternative model, where range limits are forced downslope with climate warming. Testing between these two models is challenging, due to the inherent limitations of climate and pollen records. We overcome this with an alternative source of historical information, testing between competing model predictions using genomic data and demographic analyses for a species of beetle tightly associated to an oceanic island cloud forest. Results unequivocally support the alternative model: populations that were isolated at higher elevation peaks during the Last Glacial Maximum are now in contact and hybridizing at lower elevations. Our results suggest that genomic data are a rich source of information to further understand how montane cloud forest biodiversity originates, and how it is likely to be impacted by ongoing climate change.},
  author       = {Salces-Castellano, Antonia and Stankowski, Sean and Arribas, Paula and Patino, Jairo and Karger, Dirk N.  and Butlin, Roger and Emerson, Brent C.},
  issn         = {1558-5646},
  journal      = {Evolution},
  number       = {2},
  pages        = {231--244},
  publisher    = {Wiley},
  title        = {{Long-term cloud forest response to climate warming revealed by insect speciation history}},
  doi          = {10.1111/evo.14111},
  volume       = {75},
  year         = {2021},
}

@article{8757,
  abstract     = {Traditional scientific conferences and seminar events have been hugely disrupted by the COVID-19 pandemic, paving the way for virtual forms of scientific communication to take hold and be put to the test.},
  author       = {Bozelos, Panagiotis and Vogels, Tim P},
  issn         = {14710048},
  journal      = {Nature Reviews Neuroscience},
  number       = {1},
  pages        = {1--2},
  publisher    = {Springer Nature},
  title        = {{Talking science, online}},
  doi          = {10.1038/s41583-020-00408-6},
  volume       = {22},
  year         = {2021},
}

@article{8773,
  abstract     = {Let g be a complex semisimple Lie algebra. We give a classification of contravariant forms on the nondegenerate Whittaker g-modules Y(χ,η) introduced by Kostant. We prove that the set of all contravariant forms on Y(χ,η) forms a vector space whose dimension is given by the cardinality of the Weyl group of g. We also describe a procedure for parabolically inducing contravariant forms. As a corollary, we deduce the existence of the Shapovalov form on a Verma module, and provide a formula for the dimension of the space of contravariant forms on the degenerate Whittaker modules M(χ,η) introduced by McDowell.},
  author       = {Brown, Adam and Romanov, Anna},
  issn         = {1088-6826},
  journal      = {Proceedings of the American Mathematical Society},
  keywords     = {Applied Mathematics, General Mathematics},
  number       = {1},
  pages        = {37--52},
  publisher    = {American Mathematical Society},
  title        = {{Contravariant forms on Whittaker modules}},
  doi          = {10.1090/proc/15205},
  volume       = {149},
  year         = {2021},
}

@article{8792,
  abstract     = {This paper is concerned with a non-isothermal Cahn-Hilliard model based on a microforce balance. The model was derived by A. Miranville and G. Schimperna starting from the two fundamental laws of Thermodynamics, following M. Gurtin's two-scale approach. The main working assumptions are made on the behaviour of the heat flux as the absolute temperature tends to zero and to infinity. A suitable Ginzburg-Landau free energy is considered. Global-in-time existence for the initial-boundary value problem associated to the entropy formulation and, in a subcase, also to the weak formulation of the model is proved by deriving suitable a priori estimates and by showing weak sequential stability of families of approximating solutions. At last, some highlights are given regarding a possible approximation scheme compatible with the a-priori estimates available for the system.},
  author       = {Marveggio, Alice and Schimperna, Giulio},
  issn         = {10902732},
  journal      = {Journal of Differential Equations},
  number       = {2},
  pages        = {924--970},
  publisher    = {Elsevier},
  title        = {{On a non-isothermal Cahn-Hilliard model based on a microforce balance}},
  doi          = {10.1016/j.jde.2020.10.030},
  volume       = {274},
  year         = {2021},
}

@article{8793,
  abstract     = {We study optimal election sequences for repeatedly selecting a (very) small group of leaders among a set of participants (players) with publicly known unique ids. In every time slot, every player has to select exactly one player that it considers to be the current leader, oblivious to the selection of the other players, but with the overarching goal of maximizing a given parameterized global (“social”) payoff function in the limit. We consider a quite generic model, where the local payoff achieved by a given player depends, weighted by some arbitrary but fixed real parameter, on the number of different leaders chosen in a round, the number of players that choose the given player as the leader, and whether the chosen leader has changed w.r.t. the previous round or not. The social payoff can be the maximum, average or minimum local payoff of the players. Possible applications include quite diverse examples such as rotating coordinator-based distributed algorithms and long-haul formation flying of social birds. Depending on the weights and the particular social payoff, optimal sequences can be very different, from simple round-robin where all players chose the same leader alternatingly every time slot to very exotic patterns, where a small group of leaders (at most 2) is elected in every time slot. Moreover, we study the question if and when a single player would not benefit w.r.t. its local payoff when deviating from the given optimal sequence, i.e., when our optimal sequences are Nash equilibria in the restricted strategy space of oblivious strategies. As this is the case for many parameterizations of our model, our results reveal that no punishment is needed to make it rational for the players to optimize the social payoff.},
  author       = {Zeiner, Martin and Schmid, Ulrich and Chatterjee, Krishnendu},
  issn         = {0166218X},
  journal      = {Discrete Applied Mathematics},
  number       = {1},
  pages        = {392--415},
  publisher    = {Elsevier},
  title        = {{Optimal strategies for selecting coordinators}},
  doi          = {10.1016/j.dam.2020.10.022},
  volume       = {289},
  year         = {2021},
}

@article{8816,
  abstract     = {Area-dependent quantum field theory is a modification of two-dimensional topological quantum field theory, where one equips each connected component of a bordism with a positive real number—interpreted as area—which behaves additively under glueing. As opposed to topological theories, in area-dependent theories the state spaces can be infinite-dimensional. We introduce the notion of regularised Frobenius algebras in Hilbert spaces and show that area-dependent theories are in one-to-one correspondence to commutative regularised Frobenius algebras. We also provide a state sum construction for area-dependent theories. Our main example is two-dimensional Yang–Mills theory with compact gauge group, which we treat in detail.},
  author       = {Runkel, Ingo and Szegedy, Lorant},
  issn         = {14320916},
  journal      = {Communications in Mathematical Physics},
  number       = {1},
  pages        = {83–117},
  publisher    = {Springer Nature},
  title        = {{Area-dependent quantum field theory}},
  doi          = {10.1007/s00220-020-03902-1},
  volume       = {381},
  year         = {2021},
}

@article{8817,
  abstract     = {The paper introduces an inertial extragradient subgradient method with self-adaptive step sizes for solving equilibrium problems in real Hilbert spaces. Weak convergence of the proposed method is obtained under the condition that the bifunction is pseudomonotone and Lipchitz continuous. Linear convergence is also given when the bifunction is strongly pseudomonotone and Lipchitz continuous. Numerical implementations and comparisons with other related inertial methods are given using test problems including a real-world application to Nash–Cournot oligopolistic electricity market equilibrium model.},
  author       = {Shehu, Yekini and Iyiola, Olaniyi S. and Thong, Duong Viet and Van, Nguyen Thi Cam},
  issn         = {1432-5217},
  journal      = {Mathematical Methods of Operations Research},
  number       = {2},
  pages        = {213--242},
  publisher    = {Springer Nature},
  title        = {{An inertial subgradient extragradient algorithm extended to pseudomonotone equilibrium problems}},
  doi          = {10.1007/s00186-020-00730-w},
  volume       = {93},
  year         = {2021},
}

@article{8818,
  abstract     = {The hippocampus has a major role in encoding and consolidating long-term memories, and undergoes plastic changes during sleep1. These changes require precise homeostatic control by subcortical neuromodulatory structures2. The underlying mechanisms of this phenomenon, however, remain unknown. Here, using multi-structure recordings in macaque monkeys, we show that the brainstem transiently modulates hippocampal network events through phasic pontine waves known as pontogeniculooccipital waves (PGO waves). Two physiologically distinct types of PGO wave appear to occur sequentially, selectively influencing high-frequency ripples and low-frequency theta events, respectively. The two types of PGO wave are associated with opposite hippocampal spike-field coupling, prompting periods of high neural synchrony of neural populations during periods of ripple and theta instances. The coupling between PGO waves and ripples, classically associated with distinct sleep stages, supports the notion that a global coordination mechanism of hippocampal sleep dynamics by cholinergic pontine transients may promote systems and synaptic memory consolidation as well as synaptic homeostasis.},
  author       = {Ramirez Villegas, Juan F and Besserve, Michel and Murayama, Yusuke and Evrard, Henry C. and Oeltermann, Axel and Logothetis, Nikos K.},
  issn         = {14764687},
  journal      = {Nature},
  number       = {7840},
  pages        = {96--102},
  publisher    = {Springer Nature},
  title        = {{Coupling of hippocampal theta and ripples with pontogeniculooccipital waves}},
  doi          = {10.1038/s41586-020-2914-4},
  volume       = {589},
  year         = {2021},
}

@article{8824,
  abstract     = {Plants are able to orient their growth according to gravity, which ultimately controls both shoot and root architecture.1 Gravitropism is a dynamic process whereby gravistimulation induces the asymmetric distribution of the plant hormone auxin, leading to asymmetric growth, organ bending, and subsequent reset of auxin distribution back to the original pre-gravistimulation situation.1,  2,  3 Differential auxin accumulation during the gravitropic response depends on the activity of polarly localized PIN-FORMED (PIN) auxin-efflux carriers.1,  2,  3,  4 In particular, the timing of this dynamic response is regulated by PIN2,5,6 but the underlying molecular mechanisms are poorly understood. Here, we show that MEMBRANE ASSOCIATED KINASE REGULATOR2 (MAKR2) controls the pace of the root gravitropic response. We found that MAKR2 is required for the PIN2 asymmetry during gravitropism by acting as a negative regulator of the cell-surface signaling mediated by the receptor-like kinase TRANSMEMBRANE KINASE1 (TMK1).2,7,  8,  9,  10 Furthermore, we show that the MAKR2 inhibitory effect on TMK1 signaling is antagonized by auxin itself, which triggers rapid MAKR2 membrane dissociation in a TMK1-dependent manner. Our findings suggest that the timing of the root gravitropic response is orchestrated by the reversible inhibition of the TMK1 signaling pathway at the cell surface.},
  author       = {Marquès-Bueno, MM and Armengot, L and Noack, LC and Bareille, J and Rodriguez Solovey, Lesia and Platre, MP and Bayle, V and Liu, M and Opdenacker, D and Vanneste, S and Möller, BK and Nimchuk, ZL and Beeckman, T and Caño-Delgado, AI and Friml, Jiří and Jaillais, Y},
  issn         = {1879-0445},
  journal      = {Current Biology},
  number       = {1},
  publisher    = {Elsevier},
  title        = {{Auxin-regulated reversible inhibition of TMK1 signaling by MAKR2 modulates the dynamics of root gravitropism}},
  doi          = {10.1016/j.cub.2020.10.011},
  volume       = {31},
  year         = {2021},
}

@article{8909,
  abstract     = {Spin qubits are considered to be among the most promising candidates for building a quantum processor. Group IV hole spin qubits have moved into the focus of interest due to the ease of operation and compatibility with Si technology. In addition, Ge offers the option for monolithic superconductor-semiconductor integration. Here we demonstrate a hole spin qubit operating at fields below 10 mT, the critical field of Al, by exploiting the large out-of-plane hole g-factors in planar Ge and by encoding the qubit into the singlet-triplet states of a double quantum dot. We observe electrically controlled X and Z-rotations with tunable frequencies exceeding 100 MHz and dephasing times of 1μs which we extend beyond 15μs with echo techniques. These results show that Ge hole singlet triplet qubits outperform their electronic Si and GaAs based counterparts in speed and coherence, respectively. In addition, they are on par with Ge single spin qubits, but can be operated at much lower fields underlining their potential for on chip integration with superconducting technologies.},
  author       = {Jirovec, Daniel and Hofmann, Andrea C and Ballabio, Andrea and Mutter, Philipp M. and Tavani, Giulio and Botifoll, Marc and Crippa, Alessandro and Kukucka, Josip and Sagi, Oliver and Martins, Frederico and Saez Mollejo, Jaime and Prieto Gonzalez, Ivan and Borovkov, Maksim and Arbiol, Jordi and Chrastina, Daniel and Isella, Giovanni and Katsaros, Georgios},
  issn         = {1476-4660},
  journal      = {Nature Materials},
  number       = {8},
  pages        = {1106–1112},
  publisher    = {Springer Nature},
  title        = {{A singlet triplet hole spin qubit in planar Ge}},
  doi          = {10.1038/s41563-021-01022-2},
  volume       = {20},
  year         = {2021},
}

@article{8910,
  abstract     = {A semiconducting nanowire fully wrapped by a superconducting shell has been proposed as a platform for obtaining Majorana modes at small magnetic fields. In this study, we demonstrate that the appearance of subgap states in such structures is actually governed by the junction region in tunneling spectroscopy measurements and not the full-shell nanowire itself. Short tunneling regions never show subgap states, whereas longer junctions always do. This can be understood in terms of quantum dots forming in the junction and hosting Andreev levels in the Yu-Shiba-Rusinov regime. The intricate magnetic field dependence of the Andreev levels, through both the Zeeman and Little-Parks effects, may result in robust zero-bias peaks—features that could be easily misinterpreted as originating from Majorana zero modes but are unrelated to topological superconductivity.},
  author       = {Valentini, Marco and Peñaranda, Fernando and Hofmann, Andrea C and Brauns, Matthias and Hauschild, Robert and Krogstrup, Peter and San-Jose, Pablo and Prada, Elsa and Aguado, Ramón and Katsaros, Georgios},
  issn         = {10959203},
  journal      = {Science},
  number       = {6550},
  publisher    = {American Association for the Advancement of Science},
  title        = {{Nontopological zero-bias peaks in full-shell nanowires induced by flux-tunable Andreev states}},
  doi          = {10.1126/science.abf1513},
  volume       = {373},
  year         = {2021},
}

@article{8911,
  abstract     = {In the worldwide endeavor for disruptive quantum technologies, germanium is emerging as a versatile material to realize devices capable of encoding, processing, or transmitting quantum information. These devices leverage special properties of the germanium valence-band states, commonly known as holes, such as their inherently strong spin-orbit coupling and the ability to host superconducting pairing correlations. In this Review, we initially introduce the physics of holes in low-dimensional germanium structures with key insights from a theoretical perspective. We then examine the material science progress underpinning germanium-based planar heterostructures and nanowires. We review the most significant experimental results demonstrating key building blocks for quantum technology, such as an electrically driven universal quantum gate set with spin qubits in quantum dots and superconductor-semiconductor devices for hybrid quantum systems. We conclude by identifying the most promising prospects
toward scalable quantum information processing. },
  author       = {Scappucci, Giordano and Kloeffel, Christoph and Zwanenburg, Floris A. and Loss, Daniel and Myronov, Maksym and Zhang, Jian-Jun and Franceschi, Silvano De and Katsaros, Georgios and Veldhorst, Menno},
  issn         = {2058-8437},
  journal      = {Nature Reviews Materials},
  pages        = {926–943 },
  publisher    = {Springer Nature},
  title        = {{The germanium quantum information route}},
  doi          = {10.1038/s41578-020-00262-z},
  volume       = {6},
  year         = {2021},
}

@article{8912,
  abstract     = {For automata, synchronization, the problem of bringing an automaton to a particular state regardless of its initial state, is important. It has several applications in practice and is related to a fifty-year-old conjecture on the length of the shortest synchronizing word. Although using shorter words increases the effectiveness in practice, finding a shortest one (which is not necessarily unique) is NP-hard. For this reason, there exist various heuristics in the literature. However, high-quality heuristics such as SynchroP producing relatively shorter sequences are very expensive and can take hours when the automaton has tens of thousands of states. The SynchroP heuristic has been frequently used as a benchmark to evaluate the performance of the new heuristics. In this work, we first improve the runtime of SynchroP and its variants by using algorithmic techniques. We then focus on adapting SynchroP for many-core architectures,
and overall, we obtain more than 1000× speedup on GPUs compared to naive sequential implementation that has been frequently used as a benchmark to evaluate new heuristics in the literature. We also propose two SynchroP variants and evaluate their performance.},
  author       = {Sarac, Naci E and Altun, Ömer Faruk and Atam, Kamil Tolga and Karahoda, Sertac and Kaya, Kamer and Yenigün, Hüsnü},
  issn         = {09574174},
  journal      = {Expert Systems with Applications},
  number       = {4},
  publisher    = {Elsevier},
  title        = {{Boosting expensive synchronizing heuristics}},
  doi          = {10.1016/j.eswa.2020.114203},
  volume       = {167},
  year         = {2021},
}

@article{8928,
  abstract     = {Domestication is a human‐induced selection process that imprints the genomes of domesticated populations over a short evolutionary time scale and that occurs in a given demographic context. Reconstructing historical gene flow, effective population size changes and their timing is therefore of fundamental interest to understand how plant demography and human selection jointly shape genomic divergence during domestication. Yet, the comparison under a single statistical framework of independent domestication histories across different crop species has been little evaluated so far. Thus, it is unclear whether domestication leads to convergent demographic changes that similarly affect crop genomes. To address this question, we used existing and new transcriptome data on three crop species of Solanaceae (eggplant, pepper and tomato), together with their close wild relatives. We fitted twelve demographic models of increasing complexity on the unfolded joint allele frequency spectrum for each wild/crop pair, and we found evidence for both shared and species‐specific demographic processes between species. A convergent history of domestication with gene flow was inferred for all three species, along with evidence of strong reduction in the effective population size during the cultivation stage of tomato and pepper. The absence of any reduction in size of the crop in eggplant stands out from the classical view of the domestication process; as does the existence of a “protracted period” of management before cultivation. Our results also suggest divergent management strategies of modern cultivars among species as their current demography substantially differs. Finally, the timing of domestication is species‐specific and supported by the few historical records available.},
  author       = {Arnoux, Stéphanie and Fraisse, Christelle and Sauvage, Christopher},
  issn         = {14209101},
  journal      = {Journal of Evolutionary Biology},
  number       = {2},
  pages        = {270--283},
  publisher    = {Wiley},
  title        = {{Genomic inference of complex domestication histories in three Solanaceae species}},
  doi          = {10.1111/jeb.13723},
  volume       = {34},
  year         = {2021},
}

@article{8931,
  abstract     = {Auxin is a major plant growth regulator, but current models on auxin perception and signaling cannot explain the whole plethora of auxin effects, in particular those associated with rapid responses. A possible candidate for a component of additional auxin perception mechanisms is the AUXIN BINDING PROTEIN 1 (ABP1), whose function in planta remains unclear.
Here we combined expression analysis with gain- and loss-of-function approaches to analyze the role of ABP1 in plant development. ABP1 shows a broad expression largely overlapping with, but not regulated by, transcriptional auxin response activity. Furthermore, ABP1 activity is not essential for the transcriptional auxin signaling. Genetic in planta analysis revealed that abp1 loss-of-function mutants show largely normal development with minor defects in bolting. On the other hand, ABP1 gain-of-function alleles show a broad range of growth and developmental defects, including root and hypocotyl growth and bending, lateral root and leaf development, bolting, as well as response to heat stress. At the cellular level, ABP1 gain-of-function leads to impaired auxin effect on PIN polar distribution and affects BFA-sensitive PIN intracellular aggregation.
The gain-of-function analysis suggests a broad, but still mechanistically unclear involvement of ABP1 in plant development, possibly masked in abp1 loss-of-function mutants by a functional redundancy.},
  author       = {Gelová, Zuzana and Gallei, Michelle C and Pernisová, Markéta and Brunoud, Géraldine and Zhang, Xixi and Glanc, Matous and Li, Lanxin and Michalko, Jaroslav and Pavlovicova, Zlata and Verstraeten, Inge and Han, Huibin and Hajny, Jakub and Hauschild, Robert and Čovanová, Milada and Zwiewka, Marta and Hörmayer, Lukas and Fendrych, Matyas and Xu, Tongda and Vernoux, Teva and Friml, Jiří},
  issn         = {0168-9452},
  journal      = {Plant Science},
  keywords     = {Agronomy and Crop Science, Plant Science, Genetics, General Medicine},
  publisher    = {Elsevier},
  title        = {{Developmental roles of auxin binding protein 1 in Arabidopsis thaliana}},
  doi          = {10.1016/j.plantsci.2020.110750},
  volume       = {303},
  year         = {2021},
}

@phdthesis{8934,
  abstract     = {In this thesis, we consider several of the most classical and fundamental problems in static analysis and formal verification, including invariant generation, reachability analysis, termination analysis of probabilistic programs, data-flow analysis, quantitative analysis of Markov chains and Markov decision processes, and the problem of data packing in cache management.
We use techniques from parameterized complexity theory, polyhedral geometry, and real algebraic geometry to significantly improve the state-of-the-art, in terms of both scalability and completeness guarantees, for the mentioned problems. In some cases, our results are the first theoretical improvements for the respective problems in two or three decades.},
  author       = {Goharshady, Amir Kafshdar},
  issn         = {2663-337X},
  pages        = {278},
  publisher    = {Institute of Science and Technology Austria},
  title        = {{Parameterized and algebro-geometric advances in static program analysis}},
  doi          = {10.15479/AT:ISTA:8934},
  year         = {2021},
}

@article{8940,
  abstract     = {We quantise Whitney’s construction to prove the existence of a triangulation for any C^2 manifold, so that we get an algorithm with explicit bounds. We also give a new elementary proof, which is completely geometric.},
  author       = {Boissonnat, Jean-Daniel and Kachanovich, Siargey and Wintraecken, Mathijs},
  issn         = {1432-0444},
  journal      = {Discrete & Computational Geometry},
  keywords     = {Theoretical Computer Science, Computational Theory and Mathematics, Geometry and Topology, Discrete Mathematics and Combinatorics},
  number       = {1},
  pages        = {386--434},
  publisher    = {Springer Nature},
  title        = {{Triangulating submanifolds: An elementary and quantified version of Whitney’s method}},
  doi          = {10.1007/s00454-020-00250-8},
  volume       = {66},
  year         = {2021},
}

@article{8966,
  abstract     = {During development, a single cell is transformed into a highly complex organism through progressive cell division, specification and rearrangement. An important prerequisite for the emergence of patterns within the developing organism is to establish asymmetries at various scales, ranging from individual cells to the entire embryo, eventually giving rise to the different body structures. This becomes especially apparent during gastrulation, when the earliest major lineage restriction events lead to the formation of the different germ layers. Traditionally, the unfolding of the developmental program from symmetry breaking to germ layer formation has been studied by dissecting the contributions of different signaling pathways and cellular rearrangements in the in vivo context of intact embryos. Recent efforts, using the intrinsic capacity of embryonic stem cells to self-assemble and generate embryo-like structures de novo, have opened new avenues for understanding the many ways by which an embryo can be built and the influence of extrinsic factors therein. Here, we discuss and compare divergent and conserved strategies leading to germ layer formation in embryos as compared to in vitro systems, their upstream molecular cascades and the role of extrinsic factors in this process.},
  author       = {Schauer, Alexandra and Heisenberg, Carl-Philipp J},
  issn         = {0012-1606},
  journal      = {Developmental Biology},
  keywords     = {Developmental Biology, Cell Biology, Molecular Biology},
  pages        = {71--81},
  publisher    = {Elsevier},
  title        = {{Reassembling gastrulation}},
  doi          = {10.1016/j.ydbio.2020.12.014},
  volume       = {474},
  year         = {2021},
}

@article{8988,
  abstract     = {The differentiation of cells depends on a precise control of their internal organization, which is the result of a complex dynamic interplay between the cytoskeleton, molecular motors, signaling molecules, and membranes. For example, in the developing neuron, the protein ADAP1 (ADP-ribosylation factor GTPase-activating protein [ArfGAP] with dual pleckstrin homology [PH] domains 1) has been suggested to control dendrite branching by regulating the small GTPase ARF6. Together with the motor protein KIF13B, ADAP1 is also thought to mediate delivery of the second messenger phosphatidylinositol (3,4,5)-trisphosphate (PIP3) to the axon tip, thus contributing to PIP3 polarity. However, what defines the function of ADAP1 and how its different roles are coordinated are still not clear. Here, we studied ADAP1’s functions using in vitro reconstitutions. We found that KIF13B transports ADAP1 along microtubules, but that PIP3 as well as PI(3,4)P2 act as stop signals for this transport instead of being transported. We also demonstrate that these phosphoinositides activate ADAP1’s enzymatic activity to catalyze GTP hydrolysis by ARF6. Together, our results support a model for the cellular function of ADAP1, where KIF13B transports ADAP1 until it encounters high PIP3/PI(3,4)P2 concentrations in the plasma membrane. Here, ADAP1 disassociates from the motor to inactivate ARF6, promoting dendrite branching.},
  author       = {Düllberg, Christian F and Auer, Albert and Canigova, Nikola and Loibl, Katrin and Loose, Martin},
  issn         = {10916490},
  journal      = {PNAS},
  number       = {1},
  publisher    = {National Academy of Sciences},
  title        = {{In vitro reconstitution reveals phosphoinositides as cargo-release factors and activators of the ARF6 GAP ADAP1}},
  doi          = {10.1073/pnas.2010054118},
  volume       = {118},
  year         = {2021},
}

@article{8992,
  abstract     = {The phytohormone auxin plays a central role in shaping plant growth and development. With decades of genetic and biochemical studies, numerous core molecular components and their networks, underlying auxin biosynthesis, transport, and signaling, have been identified. Notably, protein phosphorylation, catalyzed by kinases and oppositely hydrolyzed by phosphatases, has been emerging to be a crucial type of post-translational modification, regulating physiological and developmental auxin output at all levels. In this review, we comprehensively discuss earlier and recent advances in our understanding of genetics, biochemistry, and cell biology of the kinases and phosphatases participating in auxin action. We provide insights into the mechanisms by which reversible protein phosphorylation defines developmental auxin responses, discuss current challenges, and provide our perspectives on future directions involving the integration of the control of protein phosphorylation into the molecular auxin network.},
  author       = {Tan, Shutang and Luschnig, Christian and Friml, Jiří},
  issn         = {17529867},
  journal      = {Molecular Plant},
  number       = {1},
  pages        = {151--165},
  publisher    = {Elsevier},
  title        = {{Pho-view of auxin: Reversible protein phosphorylation in auxin biosynthesis, transport and signaling}},
  doi          = {10.1016/j.molp.2020.11.004},
  volume       = {14},
  year         = {2021},
}

