---
_id: '3245'
abstract:
- lang: eng
  text: How cells orchestrate their behavior during collective migration is a long-standing
    question. Using magnetic tweezers to apply mechanical stimuli to Xenopus mesendoderm
    cells, Weber etal. (2012) now reveal, in this issue of Developmental Cell, a cadherin-mediated
    mechanosensitive response that promotes cell polarization and movement persistence
    during the collective mesendoderm migration in gastrulation.
author:
- first_name: Martin
  full_name: Behrndt, Martin
  id: 3ECECA3A-F248-11E8-B48F-1D18A9856A87
  last_name: Behrndt
- first_name: Carl-Philipp J
  full_name: Heisenberg, Carl-Philipp J
  id: 39427864-F248-11E8-B48F-1D18A9856A87
  last_name: Heisenberg
  orcid: 0000-0002-0912-4566
citation:
  ama: Behrndt M, Heisenberg C-PJ. Spurred by resistance mechanosensation in collective
    migration. <i>Developmental Cell</i>. 2012;22(1):3-4. doi:<a href="https://doi.org/10.1016/j.devcel.2011.12.018">10.1016/j.devcel.2011.12.018</a>
  apa: Behrndt, M., &#38; Heisenberg, C.-P. J. (2012). Spurred by resistance mechanosensation
    in collective migration. <i>Developmental Cell</i>. Cell Press. <a href="https://doi.org/10.1016/j.devcel.2011.12.018">https://doi.org/10.1016/j.devcel.2011.12.018</a>
  chicago: Behrndt, Martin, and Carl-Philipp J Heisenberg. “Spurred by Resistance
    Mechanosensation in Collective Migration.” <i>Developmental Cell</i>. Cell Press,
    2012. <a href="https://doi.org/10.1016/j.devcel.2011.12.018">https://doi.org/10.1016/j.devcel.2011.12.018</a>.
  ieee: M. Behrndt and C.-P. J. Heisenberg, “Spurred by resistance mechanosensation
    in collective migration,” <i>Developmental Cell</i>, vol. 22, no. 1. Cell Press,
    pp. 3–4, 2012.
  ista: Behrndt M, Heisenberg C-PJ. 2012. Spurred by resistance mechanosensation in
    collective migration. Developmental Cell. 22(1), 3–4.
  mla: Behrndt, Martin, and Carl-Philipp J. Heisenberg. “Spurred by Resistance Mechanosensation
    in Collective Migration.” <i>Developmental Cell</i>, vol. 22, no. 1, Cell Press,
    2012, pp. 3–4, doi:<a href="https://doi.org/10.1016/j.devcel.2011.12.018">10.1016/j.devcel.2011.12.018</a>.
  short: M. Behrndt, C.-P.J. Heisenberg, Developmental Cell 22 (2012) 3–4.
date_created: 2018-12-11T12:02:14Z
date_published: 2012-01-17T00:00:00Z
date_updated: 2021-01-12T07:42:05Z
day: '17'
department:
- _id: CaHe
doi: 10.1016/j.devcel.2011.12.018
intvolume: '        22'
issue: '1'
language:
- iso: eng
month: '01'
oa_version: None
page: 3 - 4
publication: Developmental Cell
publication_status: published
publisher: Cell Press
publist_id: '3426'
quality_controlled: '1'
scopus_import: 1
status: public
title: Spurred by resistance mechanosensation in collective migration
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 22
year: '2012'
...
---
_id: '3246'
abstract:
- lang: eng
  text: Visualizing and analyzing shape changes at various scales, ranging from single
    molecules to whole organisms, are essential for understanding complex morphogenetic
    processes, such as early embryonic development. Embryo morphogenesis relies on
    the interplay between different tissues, the properties of which are again determined
    by the interaction between their constituent cells. Cell interactions, on the
    other hand, are controlled by various molecules, such as signaling and adhesion
    molecules, which in order to exert their functions need to be spatiotemporally
    organized within and between the interacting cells. In this review, we will focus
    on the role of cell adhesion functioning at different scales to organize cell,
    tissue and embryo morphogenesis. We will specifically ask how the subcellular
    distribution of adhesion molecules controls the formation of cell-cell contacts,
    how cell-cell contacts determine tissue shape, and how tissue interactions regulate
    embryo morphogenesis.
acknowledgement: This review comes from a themed issue on Cell structure and dynamics
  Edited by Jason Swedlow and Gaudenz Danuser
author:
- first_name: Vanessa
  full_name: Barone, Vanessa
  id: 419EECCC-F248-11E8-B48F-1D18A9856A87
  last_name: Barone
  orcid: 0000-0003-2676-3367
- first_name: Carl-Philipp J
  full_name: Heisenberg, Carl-Philipp J
  id: 39427864-F248-11E8-B48F-1D18A9856A87
  last_name: Heisenberg
  orcid: 0000-0002-0912-4566
citation:
  ama: Barone V, Heisenberg C-PJ. Cell adhesion in embryo morphogenesis. <i>Current
    Opinion in Cell Biology</i>. 2012;24(1):148-153. doi:<a href="https://doi.org/10.1016/j.ceb.2011.11.006">10.1016/j.ceb.2011.11.006</a>
  apa: Barone, V., &#38; Heisenberg, C.-P. J. (2012). Cell adhesion in embryo morphogenesis.
    <i>Current Opinion in Cell Biology</i>. Elsevier. <a href="https://doi.org/10.1016/j.ceb.2011.11.006">https://doi.org/10.1016/j.ceb.2011.11.006</a>
  chicago: Barone, Vanessa, and Carl-Philipp J Heisenberg. “Cell Adhesion in Embryo
    Morphogenesis.” <i>Current Opinion in Cell Biology</i>. Elsevier, 2012. <a href="https://doi.org/10.1016/j.ceb.2011.11.006">https://doi.org/10.1016/j.ceb.2011.11.006</a>.
  ieee: V. Barone and C.-P. J. Heisenberg, “Cell adhesion in embryo morphogenesis,”
    <i>Current Opinion in Cell Biology</i>, vol. 24, no. 1. Elsevier, pp. 148–153,
    2012.
  ista: Barone V, Heisenberg C-PJ. 2012. Cell adhesion in embryo morphogenesis. Current
    Opinion in Cell Biology. 24(1), 148–153.
  mla: Barone, Vanessa, and Carl-Philipp J. Heisenberg. “Cell Adhesion in Embryo Morphogenesis.”
    <i>Current Opinion in Cell Biology</i>, vol. 24, no. 1, Elsevier, 2012, pp. 148–53,
    doi:<a href="https://doi.org/10.1016/j.ceb.2011.11.006">10.1016/j.ceb.2011.11.006</a>.
  short: V. Barone, C.-P.J. Heisenberg, Current Opinion in Cell Biology 24 (2012)
    148–153.
date_created: 2018-12-11T12:02:14Z
date_published: 2012-02-01T00:00:00Z
date_updated: 2023-09-07T12:05:08Z
day: '01'
department:
- _id: CaHe
doi: 10.1016/j.ceb.2011.11.006
intvolume: '        24'
issue: '1'
language:
- iso: eng
month: '02'
oa_version: None
page: 148 - 153
publication: Current Opinion in Cell Biology
publication_status: published
publisher: Elsevier
publist_id: '3423'
quality_controlled: '1'
related_material:
  record:
  - id: '961'
    relation: dissertation_contains
    status: public
scopus_import: 1
status: public
title: Cell adhesion in embryo morphogenesis
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 24
year: '2012'
...
---
_id: '3247'
abstract:
- lang: eng
  text: The Brazilian Merganser is a very rare and threatened species that nowadays
    inhabits only a few protected areas and their surroundings in the Brazilian territory.
    In order to estimate the remaining genetic diversity and population structure
    in this species, two mitochondrial genes were sequenced in 39 individuals belonging
    to two populations and in one individual collected in Argentina in 1950. We found
    a highly significant divergence between two major remaining populations of Mergus
    octosetaceus, which suggests a historical population structure in this species.
    Furthermore, two deeply divergent lineages were found in a single location, which
    could due to current or historical secondary contact. Based on the available genetic
    data, we point out future directions which would contribute to design strategies
    for conservation and management of this threatened species.
acknowledgement: "The present study received grants from FAPEMIG, CNPq, Petrobras
  Ambiental and Fundação O Boticário de Conservação da Natureza, and followed all
  ethical guidelines and legal requirements of Brazil for sampling and studying an
  endangered species.\r\nWe thank the Specialist Work Group for the Conservation of
  Brazilian Merganser for valuable discussions and opinions on this manuscript. We
  also thank all the staff from Instituto Terra Brasilis and Funatura (Vivian S. Braz
  and Gislaine Disconzi) for collecting the samples at Serra da Canastra and Chapada
  dos Veadeiros, respectively; Dario A. Lijtmaerand and Pablo Tubaro for providing
  the samples from Argentina, Bradley C. Livezey for sending copies of his papers,
  and Geoff M. Hilton and Paulo de Tarso Z. Antas for useful suggestions that greatly
  improved this manuscript."
author:
- first_name: Sibelle
  full_name: Vilaça, Sibelle
  last_name: Vilaça
- first_name: Rodrigo A
  full_name: Fernandes Redondo, Rodrigo A
  id: 409D5C96-F248-11E8-B48F-1D18A9856A87
  last_name: Fernandes Redondo
  orcid: 0000-0002-5837-2793
- first_name: Lívia
  full_name: Lins, Lívia
  last_name: Lins
- first_name: Fabrício
  full_name: Santos, Fabrício
  last_name: Santos
citation:
  ama: Vilaça S, Fernandes Redondo RA, Lins L, Santos F. Remaining genetic diversity
    in Brazilian Merganser (Mergus octosetaceus). <i>Conservation Genetics</i>. 2012;13(1):293-298.
    doi:<a href="https://doi.org/10.1007/s10592-011-0262-5">10.1007/s10592-011-0262-5</a>
  apa: Vilaça, S., Fernandes Redondo, R. A., Lins, L., &#38; Santos, F. (2012). Remaining
    genetic diversity in Brazilian Merganser (Mergus octosetaceus). <i>Conservation
    Genetics</i>. Springer. <a href="https://doi.org/10.1007/s10592-011-0262-5">https://doi.org/10.1007/s10592-011-0262-5</a>
  chicago: Vilaça, Sibelle, Rodrigo A Fernandes Redondo, Lívia Lins, and Fabrício
    Santos. “Remaining Genetic Diversity in Brazilian Merganser (Mergus Octosetaceus).”
    <i>Conservation Genetics</i>. Springer, 2012. <a href="https://doi.org/10.1007/s10592-011-0262-5">https://doi.org/10.1007/s10592-011-0262-5</a>.
  ieee: S. Vilaça, R. A. Fernandes Redondo, L. Lins, and F. Santos, “Remaining genetic
    diversity in Brazilian Merganser (Mergus octosetaceus),” <i>Conservation Genetics</i>,
    vol. 13, no. 1. Springer, pp. 293–298, 2012.
  ista: Vilaça S, Fernandes Redondo RA, Lins L, Santos F. 2012. Remaining genetic
    diversity in Brazilian Merganser (Mergus octosetaceus). Conservation Genetics.
    13(1), 293–298.
  mla: Vilaça, Sibelle, et al. “Remaining Genetic Diversity in Brazilian Merganser
    (Mergus Octosetaceus).” <i>Conservation Genetics</i>, vol. 13, no. 1, Springer,
    2012, pp. 293–98, doi:<a href="https://doi.org/10.1007/s10592-011-0262-5">10.1007/s10592-011-0262-5</a>.
  short: S. Vilaça, R.A. Fernandes Redondo, L. Lins, F. Santos, Conservation Genetics
    13 (2012) 293–298.
date_created: 2018-12-11T12:02:15Z
date_published: 2012-02-01T00:00:00Z
date_updated: 2021-01-12T07:42:05Z
day: '01'
department:
- _id: JoBo
doi: 10.1007/s10592-011-0262-5
intvolume: '        13'
issue: '1'
language:
- iso: eng
month: '02'
oa_version: None
page: 293 - 298
publication: Conservation Genetics
publication_status: published
publisher: Springer
publist_id: '3420'
quality_controlled: '1'
scopus_import: 1
status: public
title: Remaining genetic diversity in Brazilian Merganser (Mergus octosetaceus)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 13
year: '2012'
...
---
_id: '3248'
abstract:
- lang: eng
  text: We describe RTblob, a high speed vision system that detects objects in cluttered
    scenes based on their color and shape at a speed of over 800 frames/s. Because
    the system is available as open-source software and relies only on off-the-shelf
    PC hardware components, it can provide the basis for multiple application scenarios.
    As an illustrative example, we show how RTblob can be used in a robotic table
    tennis scenario to estimate ball trajectories through 3D space simultaneously
    from four cameras images at a speed of 200 Hz.
article_processing_charge: No
article_type: original
author:
- first_name: Christoph
  full_name: Lampert, Christoph
  id: 40C20FD2-F248-11E8-B48F-1D18A9856A87
  last_name: Lampert
  orcid: 0000-0001-8622-7887
- first_name: Jan
  full_name: Peters, Jan
  last_name: Peters
citation:
  ama: Lampert C, Peters J. Real-time detection of colored objects in multiple camera
    streams with off-the-shelf hardware components. <i>Journal of Real-Time Image
    Processing</i>. 2012;7(1):31-41. doi:<a href="https://doi.org/10.1007/s11554-010-0168-3">10.1007/s11554-010-0168-3</a>
  apa: Lampert, C., &#38; Peters, J. (2012). Real-time detection of colored objects
    in multiple camera streams with off-the-shelf hardware components. <i>Journal
    of Real-Time Image Processing</i>. Springer. <a href="https://doi.org/10.1007/s11554-010-0168-3">https://doi.org/10.1007/s11554-010-0168-3</a>
  chicago: Lampert, Christoph, and Jan Peters. “Real-Time Detection of Colored Objects
    in Multiple Camera Streams with off-the-Shelf Hardware Components.” <i>Journal
    of Real-Time Image Processing</i>. Springer, 2012. <a href="https://doi.org/10.1007/s11554-010-0168-3">https://doi.org/10.1007/s11554-010-0168-3</a>.
  ieee: C. Lampert and J. Peters, “Real-time detection of colored objects in multiple
    camera streams with off-the-shelf hardware components,” <i>Journal of Real-Time
    Image Processing</i>, vol. 7, no. 1. Springer, pp. 31–41, 2012.
  ista: Lampert C, Peters J. 2012. Real-time detection of colored objects in multiple
    camera streams with off-the-shelf hardware components. Journal of Real-Time Image
    Processing. 7(1), 31–41.
  mla: Lampert, Christoph, and Jan Peters. “Real-Time Detection of Colored Objects
    in Multiple Camera Streams with off-the-Shelf Hardware Components.” <i>Journal
    of Real-Time Image Processing</i>, vol. 7, no. 1, Springer, 2012, pp. 31–41, doi:<a
    href="https://doi.org/10.1007/s11554-010-0168-3">10.1007/s11554-010-0168-3</a>.
  short: C. Lampert, J. Peters, Journal of Real-Time Image Processing 7 (2012) 31–41.
date_created: 2018-12-11T12:02:15Z
date_published: 2012-03-01T00:00:00Z
date_updated: 2022-05-24T08:05:40Z
day: '01'
ddc:
- '000'
department:
- _id: ChLa
doi: 10.1007/s11554-010-0168-3
file:
- access_level: open_access
  checksum: 241be47ea50e81a283bcf4c45b07e8cc
  content_type: application/pdf
  creator: kschuh
  date_created: 2019-02-12T10:52:25Z
  date_updated: 2020-07-14T12:46:04Z
  file_id: '5958'
  file_name: 2012_Springer_Lampert.pdf
  file_size: 2933187
  relation: main_file
file_date_updated: 2020-07-14T12:46:04Z
has_accepted_license: '1'
intvolume: '         7'
issue: '1'
language:
- iso: eng
month: '03'
oa: 1
oa_version: Submitted Version
page: 31 - 41
publication: Journal of Real-Time Image Processing
publication_identifier:
  eissn:
  - 1861-8219
  issn:
  - 1861-8200
publication_status: published
publisher: Springer
publist_id: '3417'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Real-time detection of colored objects in multiple camera streams with off-the-shelf
  hardware components
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 7
year: '2012'
...
---
_id: '3249'
abstract:
- lang: eng
  text: Boolean notions of correctness are formalized by preorders on systems. Quantitative
    measures of correctness can be formalized by real-valued distance functions between
    systems, where the distance between implementation and specification provides
    a measure of &quot;fit&quot; or &quot;desirability&quot;. We extend the simulation
    preorder to the quantitative setting by making each player of a simulation game
    pay a certain price for her choices. We use the resulting games with quantitative
    objectives to define three different simulation distances. The correctness distance
    measures how much the specification must be changed in order to be satisfied by
    the implementation. The coverage distance measures how much the implementation
    restricts the degrees of freedom offered by the specification. The robustness
    distance measures how much a system can deviate from the implementation description
    without violating the specification. We consider these distances for safety as
    well as liveness specifications. The distances can be computed in polynomial time
    for safety specifications, and for liveness specifications given by weak fairness
    constraints. We show that the distance functions satisfy the triangle inequality,
    that the distance between two systems does not increase under parallel composition
    with a third system, and that the distance between two systems can be bounded
    from above and below by distances between abstractions of the two systems. These
    properties suggest that our simulation distances provide an appropriate basis
    for a quantitative theory of discrete systems. We also demonstrate how the robustness
    distance can be used to measure how many transmission errors are tolerated by
    error correcting codes.
acknowledgement: This work was partially supported by the ERC Advanced Grant QUAREM,
  the FWF NFN Grant S11402-N23 (RiSE), the European Union project COMBEST and the
  European Network of Excellence Artist Design.
author:
- first_name: Pavol
  full_name: Cerny, Pavol
  id: 4DCBEFFE-F248-11E8-B48F-1D18A9856A87
  last_name: Cerny
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Arjun
  full_name: Radhakrishna, Arjun
  id: 3B51CAC4-F248-11E8-B48F-1D18A9856A87
  last_name: Radhakrishna
citation:
  ama: Cerny P, Henzinger TA, Radhakrishna A. Simulation distances. <i>Theoretical
    Computer Science</i>. 2012;413(1):21-35. doi:<a href="https://doi.org/10.1016/j.tcs.2011.08.002">10.1016/j.tcs.2011.08.002</a>
  apa: Cerny, P., Henzinger, T. A., &#38; Radhakrishna, A. (2012). Simulation distances.
    <i>Theoretical Computer Science</i>. Elsevier. <a href="https://doi.org/10.1016/j.tcs.2011.08.002">https://doi.org/10.1016/j.tcs.2011.08.002</a>
  chicago: Cerny, Pavol, Thomas A Henzinger, and Arjun Radhakrishna. “Simulation Distances.”
    <i>Theoretical Computer Science</i>. Elsevier, 2012. <a href="https://doi.org/10.1016/j.tcs.2011.08.002">https://doi.org/10.1016/j.tcs.2011.08.002</a>.
  ieee: P. Cerny, T. A. Henzinger, and A. Radhakrishna, “Simulation distances,” <i>Theoretical
    Computer Science</i>, vol. 413, no. 1. Elsevier, pp. 21–35, 2012.
  ista: Cerny P, Henzinger TA, Radhakrishna A. 2012. Simulation distances. Theoretical
    Computer Science. 413(1), 21–35.
  mla: Cerny, Pavol, et al. “Simulation Distances.” <i>Theoretical Computer Science</i>,
    vol. 413, no. 1, Elsevier, 2012, pp. 21–35, doi:<a href="https://doi.org/10.1016/j.tcs.2011.08.002">10.1016/j.tcs.2011.08.002</a>.
  short: P. Cerny, T.A. Henzinger, A. Radhakrishna, Theoretical Computer Science 413
    (2012) 21–35.
date_created: 2018-12-11T12:02:15Z
date_published: 2012-01-06T00:00:00Z
date_updated: 2023-02-23T12:24:04Z
day: '06'
department:
- _id: ToHe
doi: 10.1016/j.tcs.2011.08.002
ec_funded: 1
intvolume: '       413'
issue: '1'
language:
- iso: eng
month: '01'
oa_version: None
page: 21 - 35
project:
- _id: 25EE3708-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '267989'
  name: Quantitative Reactive Modeling
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S 11407_N23
  name: Rigorous Systems Engineering
- _id: 25EFB36C-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '215543'
  name: COMponent-Based Embedded Systems design Techniques
- _id: 25F1337C-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '214373'
  name: Design for Embedded Systems
publication: Theoretical Computer Science
publication_status: published
publisher: Elsevier
publist_id: '3408'
pubrep_id: '42'
quality_controlled: '1'
related_material:
  record:
  - id: '4393'
    relation: earlier_version
    status: public
  - id: '5389'
    relation: earlier_version
    status: public
scopus_import: 1
status: public
title: Simulation distances
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 413
year: '2012'
...
---
_id: '3250'
abstract:
- lang: eng
  text: The Learning Parity with Noise (LPN) problem has recently found many applications
    in cryptography as the hardness assumption underlying the constructions of &quot;provably
    secure&quot; cryptographic schemes like encryption or authentication protocols.
    Being provably secure means that the scheme comes with a proof showing that the
    existence of an efficient adversary against the scheme implies that the underlying
    hardness assumption is wrong. LPN based schemes are appealing for theoretical
    and practical reasons. On the theoretical side, LPN based schemes offer a very
    strong security guarantee. The LPN problem is equivalent to the problem of decoding
    random linear codes, a problem that has been extensively studied in the last half
    century. The fastest known algorithms run in exponential time and unlike most
    number-theoretic problems used in cryptography, the LPN problem does not succumb
    to known quantum algorithms. On the practical side, LPN based schemes are often
    extremely simple and efficient in terms of code-size as well as time and space
    requirements. This makes them prime candidates for light-weight devices like RFID
    tags, which are too weak to implement standard cryptographic primitives like the
    AES block-cipher. This talk will be a gentle introduction to provable security
    using simple LPN based schemes as examples. Starting from pseudorandom generators
    and symmetric key encryption, over secret-key authentication protocols, and, if
    time admits, touching on recent constructions of public-key identification, commitments
    and zero-knowledge proofs.
alternative_title:
- LNCS
author:
- first_name: Krzysztof Z
  full_name: Pietrzak, Krzysztof Z
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
citation:
  ama: 'Pietrzak KZ. Cryptography from learning parity with noise. In: Vol 7147. Springer;
    2012:99-114. doi:<a href="https://doi.org/10.1007/978-3-642-27660-6_9">10.1007/978-3-642-27660-6_9</a>'
  apa: 'Pietrzak, K. Z. (2012). Cryptography from learning parity with noise (Vol.
    7147, pp. 99–114). Presented at the SOFSEM: Current Trends in Theory and Practice
    of Computer Science, Špindlerův Mlýn, Czech Republic: Springer. <a href="https://doi.org/10.1007/978-3-642-27660-6_9">https://doi.org/10.1007/978-3-642-27660-6_9</a>'
  chicago: Pietrzak, Krzysztof Z. “Cryptography from Learning Parity with Noise,”
    7147:99–114. Springer, 2012. <a href="https://doi.org/10.1007/978-3-642-27660-6_9">https://doi.org/10.1007/978-3-642-27660-6_9</a>.
  ieee: 'K. Z. Pietrzak, “Cryptography from learning parity with noise,” presented
    at the SOFSEM: Current Trends in Theory and Practice of Computer Science, Špindlerův
    Mlýn, Czech Republic, 2012, vol. 7147, pp. 99–114.'
  ista: 'Pietrzak KZ. 2012. Cryptography from learning parity with noise. SOFSEM:
    Current Trends in Theory and Practice of Computer Science, LNCS, vol. 7147, 99–114.'
  mla: Pietrzak, Krzysztof Z. <i>Cryptography from Learning Parity with Noise</i>.
    Vol. 7147, Springer, 2012, pp. 99–114, doi:<a href="https://doi.org/10.1007/978-3-642-27660-6_9">10.1007/978-3-642-27660-6_9</a>.
  short: K.Z. Pietrzak, in:, Springer, 2012, pp. 99–114.
conference:
  end_date: 2012-01-27
  location: Špindlerův Mlýn, Czech Republic
  name: 'SOFSEM: Current Trends in Theory and Practice of Computer Science'
  start_date: 2012-01-21
date_created: 2018-12-11T12:02:15Z
date_published: 2012-02-19T00:00:00Z
date_updated: 2021-01-12T07:42:07Z
day: '19'
department:
- _id: KrPi
doi: 10.1007/978-3-642-27660-6_9
intvolume: '      7147'
language:
- iso: eng
month: '02'
oa_version: None
page: 99 - 114
publication_status: published
publisher: Springer
publist_id: '3407'
quality_controlled: '1'
scopus_import: 1
status: public
title: Cryptography from learning parity with noise
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 7147
year: '2012'
...
---
_id: '3251'
abstract:
- lang: eng
  text: Many infinite state systems can be seen as well-structured transition systems
    (WSTS), i.e., systems equipped with a well-quasi-ordering on states that is also
    a simulation relation. WSTS are an attractive target for formal analysis because
    there exist generic algorithms that decide interesting verification problems for
    this class. Among the most popular algorithms are acceleration-based forward analyses
    for computing the covering set. Termination of these algorithms can only be guaranteed
    for flattable WSTS. Yet, many WSTS of practical interest are not flattable and
    the question whether any given WSTS is flattable is itself undecidable. We therefore
    propose an analysis that computes the covering set and captures the essence of
    acceleration-based algorithms, but sacrifices precision for guaranteed termination.
    Our analysis is an abstract interpretation whose abstract domain builds on the
    ideal completion of the well-quasi-ordered state space, and a widening operator
    that mimics acceleration and controls the loss of precision of the analysis. We
    present instances of our framework for various classes of WSTS. Our experience
    with a prototype implementation indicates that, despite the inherent precision
    loss, our analysis often computes the precise covering set of the analyzed system.
acknowledgement: This research was supported in part by the European Research Council
  (ERC) Advanced Investigator Grant QUAREM and by the Austrian Science Fund (FWF)
  project S11402-N23.
alternative_title:
- LNCS
author:
- first_name: Damien
  full_name: Zufferey, Damien
  id: 4397AC76-F248-11E8-B48F-1D18A9856A87
  last_name: Zufferey
  orcid: 0000-0002-3197-8736
- first_name: Thomas
  full_name: Wies, Thomas
  id: 447BFB88-F248-11E8-B48F-1D18A9856A87
  last_name: Wies
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
citation:
  ama: 'Zufferey D, Wies T, Henzinger TA. Ideal abstractions for well structured transition
    systems. In: Vol 7148. Springer; 2012:445-460. doi:<a href="https://doi.org/10.1007/978-3-642-27940-9_29">10.1007/978-3-642-27940-9_29</a>'
  apa: 'Zufferey, D., Wies, T., &#38; Henzinger, T. A. (2012). Ideal abstractions
    for well structured transition systems (Vol. 7148, pp. 445–460). Presented at
    the VMCAI: Verification, Model Checking and Abstract Interpretation, Philadelphia,
    PA, USA: Springer. <a href="https://doi.org/10.1007/978-3-642-27940-9_29">https://doi.org/10.1007/978-3-642-27940-9_29</a>'
  chicago: Zufferey, Damien, Thomas Wies, and Thomas A Henzinger. “Ideal Abstractions
    for Well Structured Transition Systems,” 7148:445–60. Springer, 2012. <a href="https://doi.org/10.1007/978-3-642-27940-9_29">https://doi.org/10.1007/978-3-642-27940-9_29</a>.
  ieee: 'D. Zufferey, T. Wies, and T. A. Henzinger, “Ideal abstractions for well structured
    transition systems,” presented at the VMCAI: Verification, Model Checking and
    Abstract Interpretation, Philadelphia, PA, USA, 2012, vol. 7148, pp. 445–460.'
  ista: 'Zufferey D, Wies T, Henzinger TA. 2012. Ideal abstractions for well structured
    transition systems. VMCAI: Verification, Model Checking and Abstract Interpretation,
    LNCS, vol. 7148, 445–460.'
  mla: Zufferey, Damien, et al. <i>Ideal Abstractions for Well Structured Transition
    Systems</i>. Vol. 7148, Springer, 2012, pp. 445–60, doi:<a href="https://doi.org/10.1007/978-3-642-27940-9_29">10.1007/978-3-642-27940-9_29</a>.
  short: D. Zufferey, T. Wies, T.A. Henzinger, in:, Springer, 2012, pp. 445–460.
conference:
  end_date: 2012-01-24
  location: Philadelphia, PA, USA
  name: 'VMCAI: Verification, Model Checking and Abstract Interpretation'
  start_date: 2012-01-22
date_created: 2018-12-11T12:02:16Z
date_published: 2012-01-01T00:00:00Z
date_updated: 2023-09-07T11:36:36Z
day: '01'
ddc:
- '000'
- '005'
department:
- _id: ToHe
doi: 10.1007/978-3-642-27940-9_29
ec_funded: 1
file:
- access_level: open_access
  checksum: f2f0d55efa32309ad1fe65a5fcaad90c
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:09:35Z
  date_updated: 2020-07-14T12:46:05Z
  file_id: '4759'
  file_name: IST-2012-100-v1+1_Ideal_abstractions_for_well-structured_transition_systems.pdf
  file_size: 217104
  relation: main_file
file_date_updated: 2020-07-14T12:46:05Z
has_accepted_license: '1'
intvolume: '      7148'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Submitted Version
page: 445 - 460
project:
- _id: 25EE3708-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '267989'
  name: Quantitative Reactive Modeling
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S 11407_N23
  name: Rigorous Systems Engineering
publication_status: published
publisher: Springer
publist_id: '3406'
pubrep_id: '100'
quality_controlled: '1'
related_material:
  record:
  - id: '1405'
    relation: dissertation_contains
    status: public
status: public
title: Ideal abstractions for well structured transition systems
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 7148
year: '2012'
...
---
_id: '3252'
abstract:
- lang: eng
  text: 'We study the automatic synthesis of fair non-repudiation protocols, a class
    of fair exchange protocols, used for digital contract signing. First, we show
    how to specify the objectives of the participating agents, the trusted third party
    (TTP) and the protocols as path formulas in Linear Temporal Logic (LTL) and prove
    that the satisfaction of the objectives of the agents and the TTP imply satisfaction
    of the protocol objectives. We then show that weak (co-operative) co-synthesis
    and classical (strictly competitive) co-synthesis fail in synthesizing these protocols,
    whereas assume-guarantee synthesis (AGS) succeeds. We demonstrate the success
    of assume-guarantee synthesis as follows: (a) any solution of assume-guarantee
    synthesis is attack-free; no subset of participants can violate the objectives
    of the other participants without violating their own objectives; (b) the Asokan-Shoup-Waidner
    (ASW) certified mail protocol that has known vulnerabilities is not a solution
    of AGS; and (c) the Kremer-Markowitch (KM) non-repudiation protocol is a solution
    of AGS. To our knowledge this is the first application of synthesis to fair non-repudiation
    protocols, and our results show how synthesis can generate correct protocols and
    automatically discover vulnerabilities. The solution to assume-guarantee synthesis
    can be computed efficiently as the secure equilibrium solution of three-player
    graph games. © 2012 Springer-Verlag.'
acknowledgement: "The research was supported by Austrian Science Fund (FWF) Grant
  No P 23499-N23 (Modern Graph Algorithmic Techniques in Formal Verification), FWF
  NFN Grant No S11407-N23 (RiSE), ERC Start grant (279307: Graph Games), and Microsoft
  faculty fellows award.\r\nThe authors would like to thank Avik Chaudhuri for his
  invaluable help and feedback."
alternative_title:
- LNCS
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Vishwanath
  full_name: Raman, Vishwanath
  last_name: Raman
citation:
  ama: 'Chatterjee K, Raman V. Synthesizing protocols for digital contract signing.
    In: Vol 7148. Springer; 2012:152-168. doi:<a href="https://doi.org/10.1007/978-3-642-27940-9_11">10.1007/978-3-642-27940-9_11</a>'
  apa: 'Chatterjee, K., &#38; Raman, V. (2012). Synthesizing protocols for digital
    contract signing (Vol. 7148, pp. 152–168). Presented at the VMCAI: Verification,
    Model Checking and Abstract Interpretation, Philadelphia, PA, USA: Springer. <a
    href="https://doi.org/10.1007/978-3-642-27940-9_11">https://doi.org/10.1007/978-3-642-27940-9_11</a>'
  chicago: Chatterjee, Krishnendu, and Vishwanath Raman. “Synthesizing Protocols for
    Digital Contract Signing,” 7148:152–68. Springer, 2012. <a href="https://doi.org/10.1007/978-3-642-27940-9_11">https://doi.org/10.1007/978-3-642-27940-9_11</a>.
  ieee: 'K. Chatterjee and V. Raman, “Synthesizing protocols for digital contract
    signing,” presented at the VMCAI: Verification, Model Checking and Abstract Interpretation,
    Philadelphia, PA, USA, 2012, vol. 7148, pp. 152–168.'
  ista: 'Chatterjee K, Raman V. 2012. Synthesizing protocols for digital contract
    signing. VMCAI: Verification, Model Checking and Abstract Interpretation, LNCS,
    vol. 7148, 152–168.'
  mla: Chatterjee, Krishnendu, and Vishwanath Raman. <i>Synthesizing Protocols for
    Digital Contract Signing</i>. Vol. 7148, Springer, 2012, pp. 152–68, doi:<a href="https://doi.org/10.1007/978-3-642-27940-9_11">10.1007/978-3-642-27940-9_11</a>.
  short: K. Chatterjee, V. Raman, in:, Springer, 2012, pp. 152–168.
conference:
  end_date: 2012-01-24
  location: Philadelphia, PA, USA
  name: 'VMCAI: Verification, Model Checking and Abstract Interpretation'
  start_date: 2012-01-22
date_created: 2018-12-11T12:02:16Z
date_published: 2012-01-20T00:00:00Z
date_updated: 2021-01-12T07:42:08Z
day: '20'
department:
- _id: KrCh
doi: 10.1007/978-3-642-27940-9_11
ec_funded: 1
intvolume: '      7148'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1004.2697
month: '01'
oa: 1
oa_version: Preprint
page: 152 - 168
project:
- _id: 2584A770-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P 23499-N23
  name: Modern Graph Algorithmic Techniques in Formal Verification
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S 11407_N23
  name: Rigorous Systems Engineering
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
- _id: 2587B514-B435-11E9-9278-68D0E5697425
  name: Microsoft Research Faculty Fellowship
publication_status: published
publisher: Springer
publist_id: '3405'
quality_controlled: '1'
scopus_import: 1
status: public
title: Synthesizing protocols for digital contract signing
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 7148
year: '2012'
...
---
_id: '3253'
abstract:
- lang: eng
  text: We describe a framework for reasoning about programs with lists carrying integer
    numerical data. We use abstract domains to describe and manipulate complex constraints
    on configurations of these programs mixing constraints on the shape of the heap,
    sizes of the lists, on the multisets of data stored in these lists, and on the
    data at their different positions. Moreover, we provide powerful techniques for
    automatic validation of Hoare-triples and invariant checking, as well as for automatic
    synthesis of invariants and procedure summaries using modular inter-procedural
    analysis. The approach has been implemented in a tool called Celia and experimented
    successfully on a large benchmark of programs.
acknowledgement: This work was partly supported by the French National Research Agency
  (ANR) project Veridyc (ANR-09-SEGI-016).
alternative_title:
- LNCS
author:
- first_name: Ahmed
  full_name: Bouajjani, Ahmed
  last_name: Bouajjani
- first_name: Cezara
  full_name: Dragoi, Cezara
  id: 2B2B5ED0-F248-11E8-B48F-1D18A9856A87
  last_name: Dragoi
- first_name: Constantin
  full_name: Enea, Constantin
  last_name: Enea
- first_name: Mihaela
  full_name: Sighireanu, Mihaela
  last_name: Sighireanu
citation:
  ama: 'Bouajjani A, Dragoi C, Enea C, Sighireanu M. Abstract domains for automated
    reasoning about list manipulating programs with infinite data. In: Vol 7148. Springer;
    2012:1-22. doi:<a href="https://doi.org/10.1007/978-3-642-27940-9_1">10.1007/978-3-642-27940-9_1</a>'
  apa: 'Bouajjani, A., Dragoi, C., Enea, C., &#38; Sighireanu, M. (2012). Abstract
    domains for automated reasoning about list manipulating programs with infinite
    data (Vol. 7148, pp. 1–22). Presented at the VMCAI: Verification, Model Checking
    and Abstract Interpretation, Philadelphia, PA, USA: Springer. <a href="https://doi.org/10.1007/978-3-642-27940-9_1">https://doi.org/10.1007/978-3-642-27940-9_1</a>'
  chicago: Bouajjani, Ahmed, Cezara Dragoi, Constantin Enea, and Mihaela Sighireanu.
    “Abstract Domains for Automated Reasoning about List Manipulating Programs with
    Infinite Data,” 7148:1–22. Springer, 2012. <a href="https://doi.org/10.1007/978-3-642-27940-9_1">https://doi.org/10.1007/978-3-642-27940-9_1</a>.
  ieee: 'A. Bouajjani, C. Dragoi, C. Enea, and M. Sighireanu, “Abstract domains for
    automated reasoning about list manipulating programs with infinite data,” presented
    at the VMCAI: Verification, Model Checking and Abstract Interpretation, Philadelphia,
    PA, USA, 2012, vol. 7148, pp. 1–22.'
  ista: 'Bouajjani A, Dragoi C, Enea C, Sighireanu M. 2012. Abstract domains for automated
    reasoning about list manipulating programs with infinite data. VMCAI: Verification,
    Model Checking and Abstract Interpretation, LNCS, vol. 7148, 1–22.'
  mla: Bouajjani, Ahmed, et al. <i>Abstract Domains for Automated Reasoning about
    List Manipulating Programs with Infinite Data</i>. Vol. 7148, Springer, 2012,
    pp. 1–22, doi:<a href="https://doi.org/10.1007/978-3-642-27940-9_1">10.1007/978-3-642-27940-9_1</a>.
  short: A. Bouajjani, C. Dragoi, C. Enea, M. Sighireanu, in:, Springer, 2012, pp.
    1–22.
conference:
  end_date: 2012-01-24
  location: Philadelphia, PA, USA
  name: 'VMCAI: Verification, Model Checking and Abstract Interpretation'
  start_date: 2012-01-22
date_created: 2018-12-11T12:02:17Z
date_published: 2012-02-26T00:00:00Z
date_updated: 2021-01-12T07:42:09Z
day: '26'
department:
- _id: ToHe
doi: 10.1007/978-3-642-27940-9_1
intvolume: '      7148'
language:
- iso: eng
month: '02'
oa_version: None
page: 1 - 22
publication_status: published
publisher: Springer
publist_id: '3404'
quality_controlled: '1'
status: public
title: Abstract domains for automated reasoning about list manipulating programs with
  infinite data
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 7148
year: '2012'
...
---
_id: '3254'
abstract:
- lang: eng
  text: 'The theory of graph games with ω-regular winning conditions is the foundation
    for modeling and synthesizing reactive processes. In the case of stochastic reactive
    processes, the corresponding stochastic graph games have three players, two of
    them (System and Environment) behaving adversarially, and the third (Uncertainty)
    behaving probabilistically. We consider two problems for stochastic graph games:
    the qualitative problem asks for the set of states from which a player can win
    with probability 1 (almost-sure winning); and the quantitative problem asks for
    the maximal probability of winning (optimal winning) from each state. We consider
    ω-regular winning conditions formalized as Müller winning conditions. We present
    optimal memory bounds for pure (deterministic) almost-sure winning and optimal
    winning strategies in stochastic graph games with Müller winning conditions. We
    also study the complexity of stochastic Müller games and show that both the qualitative
    and quantitative analysis problems are PSPACE-complete. Our results are relevant
    in synthesis of stochastic reactive processes.'
acknowledgement: 'The research was supported by Austrian Science Fund (FWF) Grant
  No. P 23499-N23, FWF NFN Grant No. S11407-N23 (RiSE), ERC Start grant (279307: Graph
  Games), and Microsoft faculty fellows award.'
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
citation:
  ama: Chatterjee K. The complexity of stochastic Müller games. <i>Information and
    Computation</i>. 2012;211:29-48. doi:<a href="https://doi.org/10.1016/j.ic.2011.11.004">10.1016/j.ic.2011.11.004</a>
  apa: Chatterjee, K. (2012). The complexity of stochastic Müller games. <i>Information
    and Computation</i>. Elsevier. <a href="https://doi.org/10.1016/j.ic.2011.11.004">https://doi.org/10.1016/j.ic.2011.11.004</a>
  chicago: Chatterjee, Krishnendu. “The Complexity of Stochastic Müller Games.” <i>Information
    and Computation</i>. Elsevier, 2012. <a href="https://doi.org/10.1016/j.ic.2011.11.004">https://doi.org/10.1016/j.ic.2011.11.004</a>.
  ieee: K. Chatterjee, “The complexity of stochastic Müller games,” <i>Information
    and Computation</i>, vol. 211. Elsevier, pp. 29–48, 2012.
  ista: Chatterjee K. 2012. The complexity of stochastic Müller games. Information
    and Computation. 211, 29–48.
  mla: Chatterjee, Krishnendu. “The Complexity of Stochastic Müller Games.” <i>Information
    and Computation</i>, vol. 211, Elsevier, 2012, pp. 29–48, doi:<a href="https://doi.org/10.1016/j.ic.2011.11.004">10.1016/j.ic.2011.11.004</a>.
  short: K. Chatterjee, Information and Computation 211 (2012) 29–48.
date_created: 2018-12-11T12:02:17Z
date_published: 2012-02-01T00:00:00Z
date_updated: 2021-01-12T07:42:09Z
day: '01'
department:
- _id: KrCh
doi: 10.1016/j.ic.2011.11.004
ec_funded: 1
intvolume: '       211'
language:
- iso: eng
main_file_link:
- url: http://arise.or.at/pubpdf/The_complexity_of_stochastic_M___u_ller_games.pdf
month: '02'
oa_version: None
page: 29 - 48
project:
- _id: 2584A770-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P 23499-N23
  name: Modern Graph Algorithmic Techniques in Formal Verification
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S 11407_N23
  name: Rigorous Systems Engineering
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
- _id: 2587B514-B435-11E9-9278-68D0E5697425
  name: Microsoft Research Faculty Fellowship
publication: Information and Computation
publication_status: published
publisher: Elsevier
publist_id: '3403'
quality_controlled: '1'
scopus_import: 1
status: public
title: The complexity of stochastic Müller games
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 211
year: '2012'
...
---
_id: '3255'
abstract:
- lang: eng
  text: In this paper we survey results of two-player games on graphs and Markov decision
    processes with parity, mean-payoff and energy objectives, and the combination
    of mean-payoff and energy objectives with parity objectives. These problems have
    applications in verification and synthesis of reactive systems in resource-constrained
    environments.
acknowledgement: This work was partially supported by FWF NFN Grant S11407-N23 (RiSE)
  and a Microsoft faculty fellowship.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Laurent
  full_name: Doyen, Laurent
  last_name: Doyen
citation:
  ama: 'Chatterjee K, Doyen L. Games and Markov decision processes with mean payoff
    parity and energy parity objectives. In: Vol 7119. Springer; 2012:37-46. doi:<a
    href="https://doi.org/10.1007/978-3-642-25929-6_3">10.1007/978-3-642-25929-6_3</a>'
  apa: 'Chatterjee, K., &#38; Doyen, L. (2012). Games and Markov decision processes
    with mean payoff parity and energy parity objectives (Vol. 7119, pp. 37–46). Presented
    at the MEMICS: Mathematical and Engineering Methods in Computer Science, Lednice,
    Czech Republic: Springer. <a href="https://doi.org/10.1007/978-3-642-25929-6_3">https://doi.org/10.1007/978-3-642-25929-6_3</a>'
  chicago: Chatterjee, Krishnendu, and Laurent Doyen. “Games and Markov Decision Processes
    with Mean Payoff Parity and Energy Parity Objectives,” 7119:37–46. Springer, 2012.
    <a href="https://doi.org/10.1007/978-3-642-25929-6_3">https://doi.org/10.1007/978-3-642-25929-6_3</a>.
  ieee: 'K. Chatterjee and L. Doyen, “Games and Markov decision processes with mean
    payoff parity and energy parity objectives,” presented at the MEMICS: Mathematical
    and Engineering Methods in Computer Science, Lednice, Czech Republic, 2012, vol.
    7119, pp. 37–46.'
  ista: 'Chatterjee K, Doyen L. 2012. Games and Markov decision processes with mean
    payoff parity and energy parity objectives. MEMICS: Mathematical and Engineering
    Methods in Computer Science, LNCS, vol. 7119, 37–46.'
  mla: Chatterjee, Krishnendu, and Laurent Doyen. <i>Games and Markov Decision Processes
    with Mean Payoff Parity and Energy Parity Objectives</i>. Vol. 7119, Springer,
    2012, pp. 37–46, doi:<a href="https://doi.org/10.1007/978-3-642-25929-6_3">10.1007/978-3-642-25929-6_3</a>.
  short: K. Chatterjee, L. Doyen, in:, Springer, 2012, pp. 37–46.
conference:
  end_date: 2011-10-16
  location: Lednice, Czech Republic
  name: 'MEMICS: Mathematical and Engineering Methods in Computer Science'
  start_date: 2011-10-14
date_created: 2018-12-11T12:02:17Z
date_published: 2012-01-01T00:00:00Z
date_updated: 2021-01-12T07:42:10Z
day: '01'
ddc:
- '000'
department:
- _id: KrCh
doi: 10.1007/978-3-642-25929-6_3
file:
- access_level: open_access
  checksum: eed2cc1e76b160418c977e76e8899a60
  content_type: application/pdf
  creator: dernst
  date_created: 2020-05-15T12:53:12Z
  date_updated: 2020-07-14T12:46:05Z
  file_id: '7863'
  file_name: 2012_MEMICS_Chatterjee.pdf
  file_size: 114060
  relation: main_file
file_date_updated: 2020-07-14T12:46:05Z
has_accepted_license: '1'
intvolume: '      7119'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Submitted Version
page: 37 - 46
project:
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S 11407_N23
  name: Rigorous Systems Engineering
publication_status: published
publisher: Springer
publist_id: '3400'
quality_controlled: '1'
scopus_import: 1
status: public
title: Games and Markov decision processes with mean payoff parity and energy parity
  objectives
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 7119
year: '2012'
...
---
_id: '3256'
abstract:
- lang: eng
  text: We use a distortion to define the dual complex of a cubical subdivision of
    ℝ n as an n-dimensional subcomplex of the nerve of the set of n-cubes. Motivated
    by the topological analysis of high-dimensional digital image data, we consider
    such subdivisions defined by generalizations of quad- and oct-trees to n dimensions.
    Assuming the subdivision is balanced, we show that mapping each vertex to the
    center of the corresponding n-cube gives a geometric realization of the dual complex
    in ℝ n.
acknowledgement: This research is partially supported by the Defense Advanced Research
  Projects Agency (DARPA) under grants HR0011-05-1-0057 and HR0011-09-0065 as well
  as the National Science Foundation (NSF) under grant DBI-0820624.
author:
- first_name: Herbert
  full_name: Edelsbrunner, Herbert
  id: 3FB178DA-F248-11E8-B48F-1D18A9856A87
  last_name: Edelsbrunner
  orcid: 0000-0002-9823-6833
- first_name: Michael
  full_name: Kerber, Michael
  id: 36E4574A-F248-11E8-B48F-1D18A9856A87
  last_name: Kerber
  orcid: 0000-0002-8030-9299
citation:
  ama: Edelsbrunner H, Kerber M. Dual complexes of cubical subdivisions of ℝn. <i>Discrete
    &#38; Computational Geometry</i>. 2012;47(2):393-414. doi:<a href="https://doi.org/10.1007/s00454-011-9382-4">10.1007/s00454-011-9382-4</a>
  apa: Edelsbrunner, H., &#38; Kerber, M. (2012). Dual complexes of cubical subdivisions
    of ℝn. <i>Discrete &#38; Computational Geometry</i>. Springer. <a href="https://doi.org/10.1007/s00454-011-9382-4">https://doi.org/10.1007/s00454-011-9382-4</a>
  chicago: Edelsbrunner, Herbert, and Michael Kerber. “Dual Complexes of Cubical Subdivisions
    of ℝn.” <i>Discrete &#38; Computational Geometry</i>. Springer, 2012. <a href="https://doi.org/10.1007/s00454-011-9382-4">https://doi.org/10.1007/s00454-011-9382-4</a>.
  ieee: H. Edelsbrunner and M. Kerber, “Dual complexes of cubical subdivisions of
    ℝn,” <i>Discrete &#38; Computational Geometry</i>, vol. 47, no. 2. Springer, pp.
    393–414, 2012.
  ista: Edelsbrunner H, Kerber M. 2012. Dual complexes of cubical subdivisions of
    ℝn. Discrete &#38; Computational Geometry. 47(2), 393–414.
  mla: Edelsbrunner, Herbert, and Michael Kerber. “Dual Complexes of Cubical Subdivisions
    of ℝn.” <i>Discrete &#38; Computational Geometry</i>, vol. 47, no. 2, Springer,
    2012, pp. 393–414, doi:<a href="https://doi.org/10.1007/s00454-011-9382-4">10.1007/s00454-011-9382-4</a>.
  short: H. Edelsbrunner, M. Kerber, Discrete &#38; Computational Geometry 47 (2012)
    393–414.
date_created: 2018-12-11T12:02:17Z
date_published: 2012-03-01T00:00:00Z
date_updated: 2021-01-12T07:42:10Z
day: '01'
ddc:
- '000'
department:
- _id: HeEd
doi: 10.1007/s00454-011-9382-4
file:
- access_level: open_access
  checksum: 76486f3b2c9e7fd81342f3832ca387e7
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:08:15Z
  date_updated: 2020-07-14T12:46:05Z
  file_id: '4675'
  file_name: IST-2016-543-v1+1_2012-J-08-HierarchyCubeComplex.pdf
  file_size: 203636
  relation: main_file
file_date_updated: 2020-07-14T12:46:05Z
has_accepted_license: '1'
intvolume: '        47'
issue: '2'
language:
- iso: eng
month: '03'
oa: 1
oa_version: Submitted Version
page: 393 - 414
publication: Discrete & Computational Geometry
publication_status: published
publisher: Springer
publist_id: '3398'
pubrep_id: '543'
quality_controlled: '1'
scopus_import: 1
status: public
title: Dual complexes of cubical subdivisions of ℝn
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 47
year: '2012'
...
---
_id: '3257'
abstract:
- lang: eng
  text: Consider a convex relaxation f̂ of a pseudo-Boolean function f. We say that
    the relaxation is totally half-integral if f̂(x) is a polyhedral function with
    half-integral extreme points x, and this property is preserved after adding an
    arbitrary combination of constraints of the form x i=x j, x i=1-x j, and x i=γ
    where γ∈{0,1,1/2} is a constant. A well-known example is the roof duality relaxation
    for quadratic pseudo-Boolean functions f. We argue that total half-integrality
    is a natural requirement for generalizations of roof duality to arbitrary pseudo-Boolean
    functions. Our contributions are as follows. First, we provide a complete characterization
    of totally half-integral relaxations f̂ by establishing a one-to-one correspondence
    with bisubmodular functions. Second, we give a new characterization of bisubmodular
    functions. Finally, we show some relationships between general totally half-integral
    relaxations and relaxations based on the roof duality. On the conceptual level,
    our results show that bisubmodular functions provide a natural generalization
    of the roof duality approach to higher-order terms. This can be viewed as a non-submodular
    analogue of the fact that submodular functions generalize the s-t minimum cut
    problem with non-negative weights to higher-order terms.
arxiv: 1
author:
- first_name: Vladimir
  full_name: Kolmogorov, Vladimir
  id: 3D50B0BA-F248-11E8-B48F-1D18A9856A87
  last_name: Kolmogorov
citation:
  ama: Kolmogorov V. Generalized roof duality and bisubmodular functions. <i>Discrete
    Applied Mathematics</i>. 2012;160(4-5):416-426. doi:<a href="https://doi.org/10.1016/j.dam.2011.10.026">10.1016/j.dam.2011.10.026</a>
  apa: Kolmogorov, V. (2012). Generalized roof duality and bisubmodular functions.
    <i>Discrete Applied Mathematics</i>. Elsevier. <a href="https://doi.org/10.1016/j.dam.2011.10.026">https://doi.org/10.1016/j.dam.2011.10.026</a>
  chicago: Kolmogorov, Vladimir. “Generalized Roof Duality and Bisubmodular Functions.”
    <i>Discrete Applied Mathematics</i>. Elsevier, 2012. <a href="https://doi.org/10.1016/j.dam.2011.10.026">https://doi.org/10.1016/j.dam.2011.10.026</a>.
  ieee: V. Kolmogorov, “Generalized roof duality and bisubmodular functions,” <i>Discrete
    Applied Mathematics</i>, vol. 160, no. 4–5. Elsevier, pp. 416–426, 2012.
  ista: Kolmogorov V. 2012. Generalized roof duality and bisubmodular functions. Discrete
    Applied Mathematics. 160(4–5), 416–426.
  mla: Kolmogorov, Vladimir. “Generalized Roof Duality and Bisubmodular Functions.”
    <i>Discrete Applied Mathematics</i>, vol. 160, no. 4–5, Elsevier, 2012, pp. 416–26,
    doi:<a href="https://doi.org/10.1016/j.dam.2011.10.026">10.1016/j.dam.2011.10.026</a>.
  short: V. Kolmogorov, Discrete Applied Mathematics 160 (2012) 416–426.
date_created: 2018-12-11T12:02:18Z
date_published: 2012-03-01T00:00:00Z
date_updated: 2023-02-23T11:04:49Z
day: '01'
department:
- _id: VlKo
doi: 10.1016/j.dam.2011.10.026
external_id:
  arxiv:
  - '1005.2305'
intvolume: '       160'
issue: 4-5
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1005.2305
month: '03'
oa: 1
oa_version: Preprint
page: 416 - 426
publication: Discrete Applied Mathematics
publication_status: published
publisher: Elsevier
publist_id: '3397'
quality_controlled: '1'
related_material:
  record:
  - id: '2934'
    relation: earlier_version
    status: public
scopus_import: 1
status: public
title: Generalized roof duality and bisubmodular functions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 160
year: '2012'
...
---
_id: '3258'
abstract:
- lang: eng
  text: CA3 pyramidal neurons are important for memory formation and pattern completion
    in the hippocampal network. It is generally thought that proximal synapses from
    the mossy fibers activate these neurons most efficiently, whereas distal inputs
    from the perforant path have a weaker modulatory influence. We used confocally
    targeted patch-clamp recording from dendrites and axons to map the activation
    of rat CA3 pyramidal neurons at the subcellular level. Our results reveal two
    distinct dendritic domains. In the proximal domain, action potentials initiated
    in the axon backpropagate actively with large amplitude and fast time course.
    In the distal domain, Na+ channel–mediated dendritic spikes are efficiently initiated
    by waveforms mimicking synaptic events. CA3 pyramidal neuron dendrites showed
    a high Na+-to-K+ conductance density ratio, providing ideal conditions for active
    backpropagation and dendritic spike initiation. Dendritic spikes may enhance the
    computational power of CA3 pyramidal neurons in the hippocampal network.
acknowledgement: This work was supported by the Deutsche Forschungsgemeinschaft (TR
  3/B10) and the European Union (European Research Council Advanced grant to P.J.).
article_processing_charge: No
article_type: original
author:
- first_name: Sooyun
  full_name: Kim, Sooyun
  id: 394AB1C8-F248-11E8-B48F-1D18A9856A87
  last_name: Kim
- first_name: José
  full_name: Guzmán, José
  id: 30CC5506-F248-11E8-B48F-1D18A9856A87
  last_name: Guzmán
  orcid: 0000-0003-2209-5242
- first_name: Hua
  full_name: Hu, Hua
  id: 4AC0145C-F248-11E8-B48F-1D18A9856A87
  last_name: Hu
- first_name: Peter M
  full_name: Jonas, Peter M
  id: 353C1B58-F248-11E8-B48F-1D18A9856A87
  last_name: Jonas
  orcid: 0000-0001-5001-4804
citation:
  ama: Kim S, Guzmán J, Hu H, Jonas PM. Active dendrites support efficient initiation
    of dendritic spikes in hippocampal CA3 pyramidal neurons. <i>Nature Neuroscience</i>.
    2012;15(4):600-606. doi:<a href="https://doi.org/10.1038/nn.3060">10.1038/nn.3060</a>
  apa: Kim, S., Guzmán, J., Hu, H., &#38; Jonas, P. M. (2012). Active dendrites support
    efficient initiation of dendritic spikes in hippocampal CA3 pyramidal neurons.
    <i>Nature Neuroscience</i>. Nature Publishing Group. <a href="https://doi.org/10.1038/nn.3060">https://doi.org/10.1038/nn.3060</a>
  chicago: Kim, Sooyun, José Guzmán, Hua Hu, and Peter M Jonas. “Active Dendrites
    Support Efficient Initiation of Dendritic Spikes in Hippocampal CA3 Pyramidal
    Neurons.” <i>Nature Neuroscience</i>. Nature Publishing Group, 2012. <a href="https://doi.org/10.1038/nn.3060">https://doi.org/10.1038/nn.3060</a>.
  ieee: S. Kim, J. Guzmán, H. Hu, and P. M. Jonas, “Active dendrites support efficient
    initiation of dendritic spikes in hippocampal CA3 pyramidal neurons,” <i>Nature
    Neuroscience</i>, vol. 15, no. 4. Nature Publishing Group, pp. 600–606, 2012.
  ista: Kim S, Guzmán J, Hu H, Jonas PM. 2012. Active dendrites support efficient
    initiation of dendritic spikes in hippocampal CA3 pyramidal neurons. Nature Neuroscience.
    15(4), 600–606.
  mla: Kim, Sooyun, et al. “Active Dendrites Support Efficient Initiation of Dendritic
    Spikes in Hippocampal CA3 Pyramidal Neurons.” <i>Nature Neuroscience</i>, vol.
    15, no. 4, Nature Publishing Group, 2012, pp. 600–06, doi:<a href="https://doi.org/10.1038/nn.3060">10.1038/nn.3060</a>.
  short: S. Kim, J. Guzmán, H. Hu, P.M. Jonas, Nature Neuroscience 15 (2012) 600–606.
date_created: 2018-12-11T12:02:18Z
date_published: 2012-04-01T00:00:00Z
date_updated: 2023-09-07T11:43:52Z
day: '01'
department:
- _id: PeJo
doi: 10.1038/nn.3060
external_id:
  pmid:
  - '22388958'
intvolume: '        15'
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3617474/
month: '04'
oa: 1
oa_version: Published Version
page: 600 - 606
pmid: 1
project:
- _id: 25BDE9A4-B435-11E9-9278-68D0E5697425
  grant_number: SFB-TR3-TP10B
  name: Glutamaterge synaptische Übertragung und Plastizität in hippocampalen Mikroschaltkreisen
publication: Nature Neuroscience
publication_identifier:
  issn:
  - 1546-1726
publication_status: published
publisher: Nature Publishing Group
publist_id: '3390'
quality_controlled: '1'
related_material:
  record:
  - id: '2964'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Active dendrites support efficient initiation of dendritic spikes in hippocampal
  CA3 pyramidal neurons
type: journal_article
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 15
year: '2012'
...
---
_id: '3260'
abstract:
- lang: eng
  text: "Many scenarios in the living world, where individual organisms compete for
    winning positions (or resources), have properties of auctions. Here we study the
    evolution of bids in biological auctions. For each auction, n individuals are
    drawn at random from a population of size N. Each individual makes a bid which
    entails a cost. The winner obtains a benefit of a certain value. Costs and benefits
    are translated into reproductive success (fitness). Therefore, successful bidding
    strategies spread in the population. We compare two types of auctions. In “biological
    all-pay auctions”, the costs are the bid for every participating individual. In
    “biological second price all-pay auctions”, the cost for everyone other than the
    winner is the bid, but the cost for the winner is the second highest bid. Second
    price all-pay auctions are generalizations of the “war of attrition” introduced
    by Maynard Smith. We study evolutionary dynamics in both types of auctions. We
    calculate pairwise invasion plots and evolutionarily stable distributions over
    the continuous strategy space. We find that the average bid in second price all-pay
    auctions is higher than in all-pay auctions, but the average cost for the winner
    is similar in both auctions. In both cases, the average bid is a declining function
    of the number of participants, n. The more individuals participate in an auction
    the smaller is the chance of winning, and thus expensive bids must be avoided.\r\n"
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Johannes
  full_name: Reiter, Johannes
  id: 4A918E98-F248-11E8-B48F-1D18A9856A87
  last_name: Reiter
  orcid: 0000-0002-0170-7353
- first_name: Martin
  full_name: Nowak, Martin
  last_name: Nowak
citation:
  ama: Chatterjee K, Reiter J, Nowak M. Evolutionary dynamics of biological auctions.
    <i>Theoretical Population Biology</i>. 2012;81(1):69-80. doi:<a href="https://doi.org/10.1016/j.tpb.2011.11.003">10.1016/j.tpb.2011.11.003</a>
  apa: Chatterjee, K., Reiter, J., &#38; Nowak, M. (2012). Evolutionary dynamics of
    biological auctions. <i>Theoretical Population Biology</i>. Academic Press. <a
    href="https://doi.org/10.1016/j.tpb.2011.11.003">https://doi.org/10.1016/j.tpb.2011.11.003</a>
  chicago: Chatterjee, Krishnendu, Johannes Reiter, and Martin Nowak. “Evolutionary
    Dynamics of Biological Auctions.” <i>Theoretical Population Biology</i>. Academic
    Press, 2012. <a href="https://doi.org/10.1016/j.tpb.2011.11.003">https://doi.org/10.1016/j.tpb.2011.11.003</a>.
  ieee: K. Chatterjee, J. Reiter, and M. Nowak, “Evolutionary dynamics of biological
    auctions,” <i>Theoretical Population Biology</i>, vol. 81, no. 1. Academic Press,
    pp. 69–80, 2012.
  ista: Chatterjee K, Reiter J, Nowak M. 2012. Evolutionary dynamics of biological
    auctions. Theoretical Population Biology. 81(1), 69–80.
  mla: Chatterjee, Krishnendu, et al. “Evolutionary Dynamics of Biological Auctions.”
    <i>Theoretical Population Biology</i>, vol. 81, no. 1, Academic Press, 2012, pp.
    69–80, doi:<a href="https://doi.org/10.1016/j.tpb.2011.11.003">10.1016/j.tpb.2011.11.003</a>.
  short: K. Chatterjee, J. Reiter, M. Nowak, Theoretical Population Biology 81 (2012)
    69–80.
date_created: 2018-12-11T12:02:19Z
date_published: 2012-02-01T00:00:00Z
date_updated: 2023-09-07T11:40:43Z
day: '01'
department:
- _id: KrCh
doi: 10.1016/j.tpb.2011.11.003
ec_funded: 1
external_id:
  pmid:
  - '22120126'
intvolume: '        81'
issue: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: 'http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3279759/ '
month: '02'
oa: 1
oa_version: Submitted Version
page: 69 - 80
pmid: 1
project:
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S 11407_N23
  name: Rigorous Systems Engineering
- _id: 2584A770-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P 23499-N23
  name: Modern Graph Algorithmic Techniques in Formal Verification
- _id: 2587B514-B435-11E9-9278-68D0E5697425
  name: Microsoft Research Faculty Fellowship
publication: Theoretical Population Biology
publication_status: published
publisher: Academic Press
publist_id: '3388'
quality_controlled: '1'
related_material:
  record:
  - id: '1400'
    relation: dissertation_contains
    status: public
scopus_import: 1
status: public
title: Evolutionary dynamics of biological auctions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 81
year: '2012'
...
---
_id: '3262'
abstract:
- lang: eng
  text: Living cells must control the reading out or &quot;expression&quot; of information
    encoded in their genomes, and this regulation often is mediated by transcription
    factors--proteins that bind to DNA and either enhance or repress the expression
    of nearby genes. But the expression of transcription factor proteins is itself
    regulated, and many transcription factors regulate their own expression in addition
    to responding to other input signals. Here we analyze the simplest of such self-regulatory
    circuits, asking how parameters can be chosen to optimize information transmission
    from inputs to outputs in the steady state. Some nonzero level of self-regulation
    is almost always optimal, with self-activation dominant when transcription factor
    concentrations are low and self-repression dominant when concentrations are high.
    In steady state the optimal self-activation is never strong enough to induce bistability,
    although there is a limit in which the optimal parameters are very close to the
    critical point.
acknowledgement: "We thank T. Gregor, E. F. Wieschaus, and, especially, C. G. Callan
  for helpful discussions.\r\nWork at Princeton was supported in part by NSF Grants
  No. PHY–0957573 and No. CCF–0939370, by NIH Grant No. R01 GM077599, and by the W.
  M. Keck Foundation. For part of this work, G.T. was supported in part by NSF Grant
  No. EF–0928048 and by the Vice Provost for Research at the University of Pennsylvania."
article_number: '041903'
author:
- first_name: Gasper
  full_name: Tkacik, Gasper
  id: 3D494DCA-F248-11E8-B48F-1D18A9856A87
  last_name: Tkacik
  orcid: 0000-0002-6699-1455
- first_name: Aleksandra
  full_name: Walczak, Aleksandra
  last_name: Walczak
- first_name: William
  full_name: Bialek, William
  last_name: Bialek
citation:
  ama: Tkačik G, Walczak A, Bialek W. Optimizing information flow in small genetic
    networks. III. A self-interacting gene. <i> Physical Review E statistical nonlinear
    and soft matter physics </i>. 2012;85(4). doi:<a href="https://doi.org/10.1103/PhysRevE.85.041903">10.1103/PhysRevE.85.041903</a>
  apa: Tkačik, G., Walczak, A., &#38; Bialek, W. (2012). Optimizing information flow
    in small genetic networks. III. A self-interacting gene. <i> Physical Review E
    Statistical Nonlinear and Soft Matter Physics </i>. American Institute of Physics.
    <a href="https://doi.org/10.1103/PhysRevE.85.041903">https://doi.org/10.1103/PhysRevE.85.041903</a>
  chicago: Tkačik, Gašper, Aleksandra Walczak, and William Bialek. “Optimizing Information
    Flow in Small Genetic Networks. III. A Self-Interacting Gene.” <i> Physical Review
    E Statistical Nonlinear and Soft Matter Physics </i>. American Institute of Physics,
    2012. <a href="https://doi.org/10.1103/PhysRevE.85.041903">https://doi.org/10.1103/PhysRevE.85.041903</a>.
  ieee: G. Tkačik, A. Walczak, and W. Bialek, “Optimizing information flow in small
    genetic networks. III. A self-interacting gene,” <i> Physical Review E statistical
    nonlinear and soft matter physics </i>, vol. 85, no. 4. American Institute of
    Physics, 2012.
  ista: Tkačik G, Walczak A, Bialek W. 2012. Optimizing information flow in small
    genetic networks. III. A self-interacting gene.  Physical Review E statistical
    nonlinear and soft matter physics . 85(4), 041903.
  mla: Tkačik, Gašper, et al. “Optimizing Information Flow in Small Genetic Networks.
    III. A Self-Interacting Gene.” <i> Physical Review E Statistical Nonlinear and
    Soft Matter Physics </i>, vol. 85, no. 4, 041903, American Institute of Physics,
    2012, doi:<a href="https://doi.org/10.1103/PhysRevE.85.041903">10.1103/PhysRevE.85.041903</a>.
  short: G. Tkačik, A. Walczak, W. Bialek,  Physical Review E Statistical Nonlinear
    and Soft Matter Physics  85 (2012).
date_created: 2018-12-11T12:02:20Z
date_published: 2012-04-01T00:00:00Z
date_updated: 2021-01-12T07:42:14Z
day: '01'
department:
- _id: GaTk
doi: 10.1103/PhysRevE.85.041903
intvolume: '        85'
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1112.5026
month: '04'
oa: 1
oa_version: Preprint
publication: ' Physical Review E statistical nonlinear and soft matter physics '
publication_status: published
publisher: American Institute of Physics
publist_id: '3386'
quality_controlled: '1'
scopus_import: 1
status: public
title: Optimizing information flow in small genetic networks. III. A self-interacting
  gene
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 85
year: '2012'
...
---
_id: '3265'
abstract:
- lang: eng
  text: We propose a mid-level statistical model for image segmentation that composes
    multiple figure-ground hypotheses (FG) obtained by applying constraints at different
    locations and scales, into larger interpretations (tilings) of the entire image.
    Inference is cast as optimization over sets of maximal cliques sampled from a
    graph connecting all non-overlapping figure-ground segment hypotheses. Potential
    functions over cliques combine unary, Gestalt-based figure qualities, and pairwise
    compatibilities among spatially neighboring segments, constrained by T-junctions
    and the boundary interface statistics of real scenes. Learning the model parameters
    is based on maximum likelihood, alternating between sampling image tilings and
    optimizing their potential function parameters. State of the art results are reported
    on the Berkeley and Stanford segmentation datasets, as well as VOC2009, where
    a 28% improvement was achieved.
article_number: '6126486'
author:
- first_name: Adrian
  full_name: Ion, Adrian
  id: 29F89302-F248-11E8-B48F-1D18A9856A87
  last_name: Ion
- first_name: Joao
  full_name: Carreira, Joao
  last_name: Carreira
- first_name: Cristian
  full_name: Sminchisescu, Cristian
  last_name: Sminchisescu
citation:
  ama: 'Ion A, Carreira J, Sminchisescu C. Image segmentation by figure-ground composition
    into maximal cliques. In: IEEE; 2012. doi:<a href="https://doi.org/10.1109/ICCV.2011.6126486">10.1109/ICCV.2011.6126486</a>'
  apa: 'Ion, A., Carreira, J., &#38; Sminchisescu, C. (2012). Image segmentation by
    figure-ground composition into maximal cliques. Presented at the ICCV: International
    Conference on Computer Vision, Barcelona, Spain: IEEE. <a href="https://doi.org/10.1109/ICCV.2011.6126486">https://doi.org/10.1109/ICCV.2011.6126486</a>'
  chicago: Ion, Adrian, Joao Carreira, and Cristian Sminchisescu. “Image Segmentation
    by Figure-Ground Composition into Maximal Cliques.” IEEE, 2012. <a href="https://doi.org/10.1109/ICCV.2011.6126486">https://doi.org/10.1109/ICCV.2011.6126486</a>.
  ieee: 'A. Ion, J. Carreira, and C. Sminchisescu, “Image segmentation by figure-ground
    composition into maximal cliques,” presented at the ICCV: International Conference
    on Computer Vision, Barcelona, Spain, 2012.'
  ista: 'Ion A, Carreira J, Sminchisescu C. 2012. Image segmentation by figure-ground
    composition into maximal cliques. ICCV: International Conference on Computer Vision,
    6126486.'
  mla: Ion, Adrian, et al. <i>Image Segmentation by Figure-Ground Composition into
    Maximal Cliques</i>. 6126486, IEEE, 2012, doi:<a href="https://doi.org/10.1109/ICCV.2011.6126486">10.1109/ICCV.2011.6126486</a>.
  short: A. Ion, J. Carreira, C. Sminchisescu, in:, IEEE, 2012.
conference:
  end_date: 2011-11-13
  location: Barcelona, Spain
  name: 'ICCV: International Conference on Computer Vision'
  start_date: 2011-11-06
date_created: 2018-12-11T12:02:21Z
date_published: 2012-01-12T00:00:00Z
date_updated: 2021-01-12T07:42:15Z
day: '12'
department:
- _id: HeEd
doi: 10.1109/ICCV.2011.6126486
language:
- iso: eng
month: '01'
oa_version: None
publication_status: published
publisher: IEEE
publist_id: '3382'
quality_controlled: '1'
status: public
title: Image segmentation by figure-ground composition into maximal cliques
type: conference
user_id: 4435EBFC-F248-11E8-B48F-1D18A9856A87
year: '2012'
...
---
_id: '3274'
abstract:
- lang: eng
  text: A boundary element model of a tunnel running through horizontally layered
    soil with anisotropic material properties is presented. Since there is no analytical
    fundamental solution for wave propagation inside a layered orthotropic medium
    in 3D, the fundamental displacements and stresses have to be calculated numerically.
    In our model this is done in the Fourier domain with respect to space and time.
    The assumption of a straight tunnel with infinite extension in the x direction
    makes it possible to decouple the system for every wave number kx, leading to
    a 2.5D-problem, which is suited for parallel computation. The special form of
    the fundamental solution, resulting from our Fourier ansatz, and the fact, that
    the calculation of the boundary integral equation is performed in the Fourier
    domain, enhances the stability and efficiency of the numerical calculations.
acknowledgement: This work was supported by the Austrian Federal Ministry of Transport,
  Innovation and Technology under the Grant Bmvit-isb2 and the FFG under the project
  Pr. Nr. 809089.
author:
- first_name: Georg
  full_name: Rieckh, Georg
  id: 34DA8BD6-F248-11E8-B48F-1D18A9856A87
  last_name: Rieckh
- first_name: Wolfgang
  full_name: Kreuzer, Wolfgang
  last_name: Kreuzer
- first_name: Holger
  full_name: Waubke, Holger
  last_name: Waubke
- first_name: Peter
  full_name: Balazs, Peter
  last_name: Balazs
citation:
  ama: Rieckh G, Kreuzer W, Waubke H, Balazs P. A 2.5D-Fourier-BEM model for vibrations
    in a tunnel running through layered anisotropic soil. <i> Engineering Analysis
    with Boundary Elements</i>. 2012;36(6):960-967. doi:<a href="https://doi.org/10.1016/j.enganabound.2011.12.014">10.1016/j.enganabound.2011.12.014</a>
  apa: Rieckh, G., Kreuzer, W., Waubke, H., &#38; Balazs, P. (2012). A 2.5D-Fourier-BEM
    model for vibrations in a tunnel running through layered anisotropic soil. <i>
    Engineering Analysis with Boundary Elements</i>. Elsevier. <a href="https://doi.org/10.1016/j.enganabound.2011.12.014">https://doi.org/10.1016/j.enganabound.2011.12.014</a>
  chicago: Rieckh, Georg, Wolfgang Kreuzer, Holger Waubke, and Peter Balazs. “A 2.5D-Fourier-BEM
    Model for Vibrations in a Tunnel Running through Layered Anisotropic Soil.” <i>
    Engineering Analysis with Boundary Elements</i>. Elsevier, 2012. <a href="https://doi.org/10.1016/j.enganabound.2011.12.014">https://doi.org/10.1016/j.enganabound.2011.12.014</a>.
  ieee: G. Rieckh, W. Kreuzer, H. Waubke, and P. Balazs, “A 2.5D-Fourier-BEM model
    for vibrations in a tunnel running through layered anisotropic soil,” <i> Engineering
    Analysis with Boundary Elements</i>, vol. 36, no. 6. Elsevier, pp. 960–967, 2012.
  ista: Rieckh G, Kreuzer W, Waubke H, Balazs P. 2012. A 2.5D-Fourier-BEM model for
    vibrations in a tunnel running through layered anisotropic soil.  Engineering
    Analysis with Boundary Elements. 36(6), 960–967.
  mla: Rieckh, Georg, et al. “A 2.5D-Fourier-BEM Model for Vibrations in a Tunnel
    Running through Layered Anisotropic Soil.” <i> Engineering Analysis with Boundary
    Elements</i>, vol. 36, no. 6, Elsevier, 2012, pp. 960–67, doi:<a href="https://doi.org/10.1016/j.enganabound.2011.12.014">10.1016/j.enganabound.2011.12.014</a>.
  short: G. Rieckh, W. Kreuzer, H. Waubke, P. Balazs,  Engineering Analysis with Boundary
    Elements 36 (2012) 960–967.
date_created: 2018-12-11T12:02:24Z
date_published: 2012-06-01T00:00:00Z
date_updated: 2021-01-12T07:42:19Z
day: '01'
department:
- _id: GaTk
doi: 10.1016/j.enganabound.2011.12.014
intvolume: '        36'
issue: '6'
language:
- iso: eng
month: '06'
oa_version: None
page: 960 - 967
publication: ' Engineering Analysis with Boundary Elements'
publication_status: published
publisher: Elsevier
publist_id: '3372'
quality_controlled: '1'
scopus_import: 1
status: public
title: A 2.5D-Fourier-BEM model for vibrations in a tunnel running through layered
  anisotropic soil
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 36
year: '2012'
...
---
_id: '3277'
abstract:
- lang: eng
  text: The problem of the origin of metazoa is becoming more urgent in the context
    of astrobiology. By now it is clear that clues to the understanding of this crucial
    transition in the evolution of life can arise in a fourth pathway besides the
    three possibilities in the quest for simplicity outlined by Bonner in his classical
    book. In other words, solar system exploration seems to be one way in the long-term
    to elucidate the simplicity of evolutionary development. We place these ideas
    in the context of different inheritance systems, namely the genotypic and phenotypic
    replicators with limited or unlimited heredity, and ask which of these can support
    multicellular development, and to which degree of complexity. However, the quest
    for evidence on the evolution of biotas from planets around other stars does not
    seem to be feasible with present technology with direct visualization of living
    organisms on exoplanets. But this may be attempted on the Galilean moons of Jupiter
    where there is a possibility of detecting reliable biomarkers in the next decade
    with the Europa Jupiter System Mission, in view of recent progress by landing
    micropenetrators on planetary, or satellite surfaces. Mars is a second possibility
    in the inner Solar System, in spite of the multiple difficulties faced by the
    fleet of past, present and future missions. We discuss a series of preliminary
    ideas for elucidating the origin of metazoan analogues with available instrumentation
    in potential payloads of feasible space missions to the Galilean moons.
alternative_title:
- Cellular Origin, Life in Extreme Habitats and Astrobiology
author:
- first_name: Harold
  full_name: de Vladar, Harold
  id: 2A181218-F248-11E8-B48F-1D18A9856A87
  last_name: de Vladar
  orcid: 0000-0002-5985-7653
- first_name: Julian
  full_name: Chela Flores, Julian
  last_name: Chela Flores
citation:
  ama: 'de Vladar H, Chela Flores J. Can the evolution of multicellularity be anticipated
    in the exploration of the solar system? In: <i>Life on Earth and Other Planetary
    Bodies</i>. Vol 24. Springer; 2012:387-405. doi:<a href="https://doi.org/10.1007/978-94-007-4966-5_22">10.1007/978-94-007-4966-5_22</a>'
  apa: de Vladar, H., &#38; Chela Flores, J. (2012). Can the evolution of multicellularity
    be anticipated in the exploration of the solar system? In <i>Life on Earth and
    other planetary bodies</i> (Vol. 24, pp. 387–405). Springer. <a href="https://doi.org/10.1007/978-94-007-4966-5_22">https://doi.org/10.1007/978-94-007-4966-5_22</a>
  chicago: Vladar, Harold de, and Julian Chela Flores. “Can the Evolution of Multicellularity
    Be Anticipated in the Exploration of the Solar System?” In <i>Life on Earth and
    Other Planetary Bodies</i>, 24:387–405. Springer, 2012. <a href="https://doi.org/10.1007/978-94-007-4966-5_22">https://doi.org/10.1007/978-94-007-4966-5_22</a>.
  ieee: H. de Vladar and J. Chela Flores, “Can the evolution of multicellularity be
    anticipated in the exploration of the solar system?,” in <i>Life on Earth and
    other planetary bodies</i>, vol. 24, Springer, 2012, pp. 387–405.
  ista: 'de Vladar H, Chela Flores J. 2012.Can the evolution of multicellularity be
    anticipated in the exploration of the solar system? In: Life on Earth and other
    planetary bodies. Cellular Origin, Life in Extreme Habitats and Astrobiology,
    vol. 24, 387–405.'
  mla: de Vladar, Harold, and Julian Chela Flores. “Can the Evolution of Multicellularity
    Be Anticipated in the Exploration of the Solar System?” <i>Life on Earth and Other
    Planetary Bodies</i>, vol. 24, Springer, 2012, pp. 387–405, doi:<a href="https://doi.org/10.1007/978-94-007-4966-5_22">10.1007/978-94-007-4966-5_22</a>.
  short: H. de Vladar, J. Chela Flores, in:, Life on Earth and Other Planetary Bodies,
    Springer, 2012, pp. 387–405.
date_created: 2018-12-11T12:02:25Z
date_published: 2012-01-01T00:00:00Z
date_updated: 2021-01-12T07:42:20Z
day: '01'
department:
- _id: NiBa
doi: 10.1007/978-94-007-4966-5_22
intvolume: '        24'
language:
- iso: eng
month: '01'
oa_version: None
page: 387 - 405
publication: Life on Earth and other planetary bodies
publication_status: published
publisher: Springer
publist_id: '3369'
quality_controlled: '1'
status: public
title: Can the evolution of multicellularity be anticipated in the exploration of
  the solar system?
type: book_chapter
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 24
year: '2012'
...
---
_id: '3279'
abstract:
- lang: eng
  text: "We show a hardness-preserving construction of a PRF from any length doubling
    PRG which improves upon known constructions whenever we can put a non-trivial
    upper bound q on the number of queries to the PRF. Our construction requires only
    O(logq) invocations to the underlying PRG with each query. In comparison, the
    number of invocations by the best previous hardness-preserving construction (GGM
    using Levin's trick) is logarithmic in the hardness of the PRG. For example, starting
    from an exponentially secure PRG {0,1} n → {0,1} 2n, we get a PRF which is exponentially
    secure if queried at most q = exp(√n)times and where each invocation of the PRF
    requires Θ(√n) queries to the underlying PRG. This is much less than the Θ(n)
    required by known constructions. \r\n"
acknowledgement: Supported by the European Research Council under the European Union’s
  Seventh Framework Programme (FP7/2007-2013) / ERC Starting Grant (259668-PSPC)
alternative_title:
- LNCS
author:
- first_name: Abhishek
  full_name: Jain, Abhishek
  last_name: Jain
- first_name: Krzysztof Z
  full_name: Pietrzak, Krzysztof Z
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
- first_name: Aris
  full_name: Tentes, Aris
  last_name: Tentes
citation:
  ama: 'Jain A, Pietrzak KZ, Tentes A. Hardness preserving constructions of pseudorandom
    functions. In: Vol 7194. Springer; 2012:369-382. doi:<a href="https://doi.org/10.1007/978-3-642-28914-9_21">10.1007/978-3-642-28914-9_21</a>'
  apa: 'Jain, A., Pietrzak, K. Z., &#38; Tentes, A. (2012). Hardness preserving constructions
    of pseudorandom functions (Vol. 7194, pp. 369–382). Presented at the TCC: Theory
    of Cryptography Conference, Taormina, Sicily, Italy: Springer. <a href="https://doi.org/10.1007/978-3-642-28914-9_21">https://doi.org/10.1007/978-3-642-28914-9_21</a>'
  chicago: Jain, Abhishek, Krzysztof Z Pietrzak, and Aris Tentes. “Hardness Preserving
    Constructions of Pseudorandom Functions,” 7194:369–82. Springer, 2012. <a href="https://doi.org/10.1007/978-3-642-28914-9_21">https://doi.org/10.1007/978-3-642-28914-9_21</a>.
  ieee: 'A. Jain, K. Z. Pietrzak, and A. Tentes, “Hardness preserving constructions
    of pseudorandom functions,” presented at the TCC: Theory of Cryptography Conference,
    Taormina, Sicily, Italy, 2012, vol. 7194, pp. 369–382.'
  ista: 'Jain A, Pietrzak KZ, Tentes A. 2012. Hardness preserving constructions of
    pseudorandom functions. TCC: Theory of Cryptography Conference, LNCS, vol. 7194,
    369–382.'
  mla: Jain, Abhishek, et al. <i>Hardness Preserving Constructions of Pseudorandom
    Functions</i>. Vol. 7194, Springer, 2012, pp. 369–82, doi:<a href="https://doi.org/10.1007/978-3-642-28914-9_21">10.1007/978-3-642-28914-9_21</a>.
  short: A. Jain, K.Z. Pietrzak, A. Tentes, in:, Springer, 2012, pp. 369–382.
conference:
  end_date: 2012-03-21
  location: Taormina, Sicily, Italy
  name: 'TCC: Theory of Cryptography Conference'
  start_date: 2012-03-19
date_created: 2018-12-11T12:02:25Z
date_published: 2012-05-04T00:00:00Z
date_updated: 2021-01-12T07:42:21Z
day: '04'
department:
- _id: KrPi
doi: 10.1007/978-3-642-28914-9_21
ec_funded: 1
intvolume: '      7194'
language:
- iso: eng
main_file_link:
- url: http://www.iacr.org/archive/tcc2012/tcc2012-index.html
month: '05'
oa_version: None
page: 369 - 382
project:
- _id: 258C570E-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '259668'
  name: Provable Security for Physical Cryptography
publication_status: published
publisher: Springer
publist_id: '3367'
quality_controlled: '1'
scopus_import: 1
status: public
title: Hardness preserving constructions of pseudorandom functions
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 7194
year: '2012'
...
