---
_id: '9781'
abstract:
- lang: eng
  text: We consider the Pekar functional on a ball in ℝ3. We prove uniqueness of minimizers,
    and a quadratic lower bound in terms of the distance to the minimizer. The latter
    follows from nondegeneracy of the Hessian at the minimum.
acknowledgement: We are grateful for the hospitality at the Mittag-Leffler Institute,
  where part of this work has been done. The work of the authors was supported by
  the European Research Council (ERC)under the European Union's Horizon 2020 research
  and innovation programme grant 694227.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Dario
  full_name: Feliciangeli, Dario
  id: 41A639AA-F248-11E8-B48F-1D18A9856A87
  last_name: Feliciangeli
  orcid: 0000-0003-0754-8530
- first_name: Robert
  full_name: Seiringer, Robert
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
citation:
  ama: Feliciangeli D, Seiringer R. Uniqueness and nondegeneracy of minimizers of
    the Pekar functional on a ball. <i>SIAM Journal on Mathematical Analysis</i>.
    2020;52(1):605-622. doi:<a href="https://doi.org/10.1137/19m126284x">10.1137/19m126284x</a>
  apa: Feliciangeli, D., &#38; Seiringer, R. (2020). Uniqueness and nondegeneracy
    of minimizers of the Pekar functional on a ball. <i>SIAM Journal on Mathematical
    Analysis</i>. Society for Industrial &#38; Applied Mathematics . <a href="https://doi.org/10.1137/19m126284x">https://doi.org/10.1137/19m126284x</a>
  chicago: Feliciangeli, Dario, and Robert Seiringer. “Uniqueness and Nondegeneracy
    of Minimizers of the Pekar Functional on a Ball.” <i>SIAM Journal on Mathematical
    Analysis</i>. Society for Industrial &#38; Applied Mathematics , 2020. <a href="https://doi.org/10.1137/19m126284x">https://doi.org/10.1137/19m126284x</a>.
  ieee: D. Feliciangeli and R. Seiringer, “Uniqueness and nondegeneracy of minimizers
    of the Pekar functional on a ball,” <i>SIAM Journal on Mathematical Analysis</i>,
    vol. 52, no. 1. Society for Industrial &#38; Applied Mathematics , pp. 605–622,
    2020.
  ista: Feliciangeli D, Seiringer R. 2020. Uniqueness and nondegeneracy of minimizers
    of the Pekar functional on a ball. SIAM Journal on Mathematical Analysis. 52(1),
    605–622.
  mla: Feliciangeli, Dario, and Robert Seiringer. “Uniqueness and Nondegeneracy of
    Minimizers of the Pekar Functional on a Ball.” <i>SIAM Journal on Mathematical
    Analysis</i>, vol. 52, no. 1, Society for Industrial &#38; Applied Mathematics
    , 2020, pp. 605–22, doi:<a href="https://doi.org/10.1137/19m126284x">10.1137/19m126284x</a>.
  short: D. Feliciangeli, R. Seiringer, SIAM Journal on Mathematical Analysis 52 (2020)
    605–622.
date_created: 2021-08-06T07:34:16Z
date_published: 2020-02-12T00:00:00Z
date_updated: 2023-09-07T13:30:11Z
day: '12'
ddc:
- '510'
department:
- _id: RoSe
doi: 10.1137/19m126284x
ec_funded: 1
external_id:
  arxiv:
  - '1904.08647 '
  isi:
  - '000546967700022'
has_accepted_license: '1'
intvolume: '        52'
isi: 1
issue: '1'
keyword:
- Applied Mathematics
- Computational Mathematics
- Analysis
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1904.08647
month: '02'
oa: 1
oa_version: Preprint
page: 605-622
project:
- _id: 25C6DC12-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '694227'
  name: Analysis of quantum many-body systems
publication: SIAM Journal on Mathematical Analysis
publication_identifier:
  eissn:
  - 1095-7154
  issn:
  - 0036-1410
publication_status: published
publisher: 'Society for Industrial & Applied Mathematics '
quality_controlled: '1'
related_material:
  record:
  - id: '9733'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Uniqueness and nondegeneracy of minimizers of the Pekar functional on a ball
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 52
year: '2020'
...
---
_id: '9798'
abstract:
- lang: eng
  text: Fitness interactions between mutations can influence a population’s evolution
    in many different ways. While epistatic effects are difficult to measure precisely,
    important information is captured by the mean and variance of log fitnesses for
    individuals carrying different numbers of mutations. We derive predictions for
    these quantities from a class of simple fitness landscapes, based on models of
    optimizing selection on quantitative traits. We also explore extensions to the
    models, including modular pleiotropy, variable effect sizes, mutational bias and
    maladaptation of the wild type. We illustrate our approach by reanalysing a large
    dataset of mutant effects in a yeast snoRNA. Though characterized by some large
    epistatic effects, these data give a good overall fit to the non-epistatic null
    model, suggesting that epistasis might have limited influence on the evolutionary
    dynamics in this system. We also show how the amount of epistasis depends on both
    the underlying fitness landscape and the distribution of mutations, and so is
    expected to vary in consistent ways between new mutations, standing variation
    and fixed mutations.
article_processing_charge: No
author:
- first_name: Christelle
  full_name: Fraisse, Christelle
  id: 32DF5794-F248-11E8-B48F-1D18A9856A87
  last_name: Fraisse
  orcid: 0000-0001-8441-5075
- first_name: John J.
  full_name: Welch, John J.
  last_name: Welch
citation:
  ama: Fraisse C, Welch JJ. Simulation code for Fig S2 from the distribution of epistasis
    on simple fitness landscapes. 2020. doi:<a href="https://doi.org/10.6084/m9.figshare.7957472.v1">10.6084/m9.figshare.7957472.v1</a>
  apa: Fraisse, C., &#38; Welch, J. J. (2020). Simulation code for Fig S2 from the
    distribution of epistasis on simple fitness landscapes. Royal Society of London.
    <a href="https://doi.org/10.6084/m9.figshare.7957472.v1">https://doi.org/10.6084/m9.figshare.7957472.v1</a>
  chicago: Fraisse, Christelle, and John J. Welch. “Simulation Code for Fig S2 from
    the Distribution of Epistasis on Simple Fitness Landscapes.” Royal Society of
    London, 2020. <a href="https://doi.org/10.6084/m9.figshare.7957472.v1">https://doi.org/10.6084/m9.figshare.7957472.v1</a>.
  ieee: C. Fraisse and J. J. Welch, “Simulation code for Fig S2 from the distribution
    of epistasis on simple fitness landscapes.” Royal Society of London, 2020.
  ista: Fraisse C, Welch JJ. 2020. Simulation code for Fig S2 from the distribution
    of epistasis on simple fitness landscapes, Royal Society of London, <a href="https://doi.org/10.6084/m9.figshare.7957472.v1">10.6084/m9.figshare.7957472.v1</a>.
  mla: Fraisse, Christelle, and John J. Welch. <i>Simulation Code for Fig S2 from
    the Distribution of Epistasis on Simple Fitness Landscapes</i>. Royal Society
    of London, 2020, doi:<a href="https://doi.org/10.6084/m9.figshare.7957472.v1">10.6084/m9.figshare.7957472.v1</a>.
  short: C. Fraisse, J.J. Welch, (2020).
date_created: 2021-08-06T11:18:15Z
date_published: 2020-10-15T00:00:00Z
date_updated: 2023-08-25T10:34:41Z
day: '15'
department:
- _id: BeVi
- _id: NiBa
doi: 10.6084/m9.figshare.7957472.v1
main_file_link:
- open_access: '1'
  url: https://doi.org/10.6084/m9.figshare.7957472.v1
month: '10'
oa: 1
oa_version: Published Version
publisher: Royal Society of London
related_material:
  record:
  - id: '6467'
    relation: used_in_publication
    status: public
status: public
title: Simulation code for Fig S2 from the distribution of epistasis on simple fitness
  landscapes
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2020'
...
---
_id: '9799'
abstract:
- lang: eng
  text: Fitness interactions between mutations can influence a population’s evolution
    in many different ways. While epistatic effects are difficult to measure precisely,
    important information is captured by the mean and variance of log fitnesses for
    individuals carrying different numbers of mutations. We derive predictions for
    these quantities from a class of simple fitness landscapes, based on models of
    optimizing selection on quantitative traits. We also explore extensions to the
    models, including modular pleiotropy, variable effect sizes, mutational bias and
    maladaptation of the wild type. We illustrate our approach by reanalysing a large
    dataset of mutant effects in a yeast snoRNA. Though characterized by some large
    epistatic effects, these data give a good overall fit to the non-epistatic null
    model, suggesting that epistasis might have limited influence on the evolutionary
    dynamics in this system. We also show how the amount of epistasis depends on both
    the underlying fitness landscape and the distribution of mutations, and so is
    expected to vary in consistent ways between new mutations, standing variation
    and fixed mutations.
article_processing_charge: No
author:
- first_name: Christelle
  full_name: Fraisse, Christelle
  id: 32DF5794-F248-11E8-B48F-1D18A9856A87
  last_name: Fraisse
  orcid: 0000-0001-8441-5075
- first_name: John J.
  full_name: Welch, John J.
  last_name: Welch
citation:
  ama: Fraisse C, Welch JJ. Simulation code for Fig S1 from the distribution of epistasis
    on simple fitness landscapes. 2020. doi:<a href="https://doi.org/10.6084/m9.figshare.7957469.v1">10.6084/m9.figshare.7957469.v1</a>
  apa: Fraisse, C., &#38; Welch, J. J. (2020). Simulation code for Fig S1 from the
    distribution of epistasis on simple fitness landscapes. Royal Society of London.
    <a href="https://doi.org/10.6084/m9.figshare.7957469.v1">https://doi.org/10.6084/m9.figshare.7957469.v1</a>
  chicago: Fraisse, Christelle, and John J. Welch. “Simulation Code for Fig S1 from
    the Distribution of Epistasis on Simple Fitness Landscapes.” Royal Society of
    London, 2020. <a href="https://doi.org/10.6084/m9.figshare.7957469.v1">https://doi.org/10.6084/m9.figshare.7957469.v1</a>.
  ieee: C. Fraisse and J. J. Welch, “Simulation code for Fig S1 from the distribution
    of epistasis on simple fitness landscapes.” Royal Society of London, 2020.
  ista: Fraisse C, Welch JJ. 2020. Simulation code for Fig S1 from the distribution
    of epistasis on simple fitness landscapes, Royal Society of London, <a href="https://doi.org/10.6084/m9.figshare.7957469.v1">10.6084/m9.figshare.7957469.v1</a>.
  mla: Fraisse, Christelle, and John J. Welch. <i>Simulation Code for Fig S1 from
    the Distribution of Epistasis on Simple Fitness Landscapes</i>. Royal Society
    of London, 2020, doi:<a href="https://doi.org/10.6084/m9.figshare.7957469.v1">10.6084/m9.figshare.7957469.v1</a>.
  short: C. Fraisse, J.J. Welch, (2020).
date_created: 2021-08-06T11:26:57Z
date_published: 2020-10-15T00:00:00Z
date_updated: 2023-08-25T10:34:41Z
day: '15'
department:
- _id: BeVi
- _id: NiBa
doi: 10.6084/m9.figshare.7957469.v1
main_file_link:
- open_access: '1'
  url: https://doi.org/10.6084/m9.figshare.7957469.v1
month: '10'
oa: 1
oa_version: Published Version
publisher: Royal Society of London
related_material:
  record:
  - id: '6467'
    relation: used_in_publication
    status: public
status: public
title: Simulation code for Fig S1 from the distribution of epistasis on simple fitness
  landscapes
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2020'
...
---
_id: '9814'
abstract:
- lang: eng
  text: Data and mathematica notebooks for plotting figures from Language learning
    with communication between learners
article_processing_charge: No
author:
- first_name: Rasmus
  full_name: Ibsen-Jensen, Rasmus
  id: 3B699956-F248-11E8-B48F-1D18A9856A87
  last_name: Ibsen-Jensen
  orcid: 0000-0003-4783-0389
- first_name: Josef
  full_name: Tkadlec, Josef
  id: 3F24CCC8-F248-11E8-B48F-1D18A9856A87
  last_name: Tkadlec
  orcid: 0000-0002-1097-9684
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Martin
  full_name: Nowak, Martin
  last_name: Nowak
citation:
  ama: Ibsen-Jensen R, Tkadlec J, Chatterjee K, Nowak M. Data and mathematica notebooks
    for plotting figures from language learning with communication between learners
    from language acquisition with communication between learners. 2020. doi:<a href="https://doi.org/10.6084/m9.figshare.5973013.v1">10.6084/m9.figshare.5973013.v1</a>
  apa: Ibsen-Jensen, R., Tkadlec, J., Chatterjee, K., &#38; Nowak, M. (2020). Data
    and mathematica notebooks for plotting figures from language learning with communication
    between learners from language acquisition with communication between learners.
    Royal Society. <a href="https://doi.org/10.6084/m9.figshare.5973013.v1">https://doi.org/10.6084/m9.figshare.5973013.v1</a>
  chicago: Ibsen-Jensen, Rasmus, Josef Tkadlec, Krishnendu Chatterjee, and Martin
    Nowak. “Data and Mathematica Notebooks for Plotting Figures from Language Learning
    with Communication between Learners from Language Acquisition with Communication
    between Learners.” Royal Society, 2020. <a href="https://doi.org/10.6084/m9.figshare.5973013.v1">https://doi.org/10.6084/m9.figshare.5973013.v1</a>.
  ieee: R. Ibsen-Jensen, J. Tkadlec, K. Chatterjee, and M. Nowak, “Data and mathematica
    notebooks for plotting figures from language learning with communication between
    learners from language acquisition with communication between learners.” Royal
    Society, 2020.
  ista: Ibsen-Jensen R, Tkadlec J, Chatterjee K, Nowak M. 2020. Data and mathematica
    notebooks for plotting figures from language learning with communication between
    learners from language acquisition with communication between learners, Royal
    Society, <a href="https://doi.org/10.6084/m9.figshare.5973013.v1">10.6084/m9.figshare.5973013.v1</a>.
  mla: Ibsen-Jensen, Rasmus, et al. <i>Data and Mathematica Notebooks for Plotting
    Figures from Language Learning with Communication between Learners from Language
    Acquisition with Communication between Learners</i>. Royal Society, 2020, doi:<a
    href="https://doi.org/10.6084/m9.figshare.5973013.v1">10.6084/m9.figshare.5973013.v1</a>.
  short: R. Ibsen-Jensen, J. Tkadlec, K. Chatterjee, M. Nowak, (2020).
date_created: 2021-08-06T13:09:57Z
date_published: 2020-10-15T00:00:00Z
date_updated: 2023-10-18T06:36:00Z
day: '15'
department:
- _id: KrCh
doi: 10.6084/m9.figshare.5973013.v1
main_file_link:
- open_access: '1'
  url: https://doi.org/10.6084/m9.figshare.5973013.v1
month: '10'
oa: 1
oa_version: Published Version
publisher: Royal Society
related_material:
  record:
  - id: '198'
    relation: used_in_publication
    status: public
status: public
title: Data and mathematica notebooks for plotting figures from language learning
  with communication between learners from language acquisition with communication
  between learners
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2020'
...
---
_id: '9878'
article_processing_charge: No
author:
- first_name: Chitrak
  full_name: Gupta, Chitrak
  last_name: Gupta
- first_name: Umesh
  full_name: Khaniya, Umesh
  last_name: Khaniya
- first_name: Chun Kit
  full_name: Chan, Chun Kit
  last_name: Chan
- first_name: Francois
  full_name: Dehez, Francois
  last_name: Dehez
- first_name: Mrinal
  full_name: Shekhar, Mrinal
  last_name: Shekhar
- first_name: M.R.
  full_name: Gunner, M.R.
  last_name: Gunner
- first_name: Leonid A
  full_name: Sazanov, Leonid A
  id: 338D39FE-F248-11E8-B48F-1D18A9856A87
  last_name: Sazanov
  orcid: 0000-0002-0977-7989
- first_name: Christophe
  full_name: Chipot, Christophe
  last_name: Chipot
- first_name: Abhishek
  full_name: Singharoy, Abhishek
  last_name: Singharoy
citation:
  ama: Gupta C, Khaniya U, Chan CK, et al. Movies. 2020. doi:<a href="https://doi.org/10.1021/jacs.9b13450.s002">10.1021/jacs.9b13450.s002</a>
  apa: Gupta, C., Khaniya, U., Chan, C. K., Dehez, F., Shekhar, M., Gunner, M. R.,
    … Singharoy, A. (2020). Movies. American Chemical Society. <a href="https://doi.org/10.1021/jacs.9b13450.s002">https://doi.org/10.1021/jacs.9b13450.s002</a>
  chicago: Gupta, Chitrak, Umesh Khaniya, Chun Kit Chan, Francois Dehez, Mrinal Shekhar,
    M.R. Gunner, Leonid A Sazanov, Christophe Chipot, and Abhishek Singharoy. “Movies.”
    American Chemical Society, 2020. <a href="https://doi.org/10.1021/jacs.9b13450.s002">https://doi.org/10.1021/jacs.9b13450.s002</a>.
  ieee: C. Gupta <i>et al.</i>, “Movies.” American Chemical Society, 2020.
  ista: Gupta C, Khaniya U, Chan CK, Dehez F, Shekhar M, Gunner MR, Sazanov LA, Chipot
    C, Singharoy A. 2020. Movies, American Chemical Society, <a href="https://doi.org/10.1021/jacs.9b13450.s002">10.1021/jacs.9b13450.s002</a>.
  mla: Gupta, Chitrak, et al. <i>Movies</i>. American Chemical Society, 2020, doi:<a
    href="https://doi.org/10.1021/jacs.9b13450.s002">10.1021/jacs.9b13450.s002</a>.
  short: C. Gupta, U. Khaniya, C.K. Chan, F. Dehez, M. Shekhar, M.R. Gunner, L.A.
    Sazanov, C. Chipot, A. Singharoy, (2020).
date_created: 2021-08-11T09:18:54Z
date_published: 2020-05-20T00:00:00Z
date_updated: 2023-08-22T07:49:38Z
day: '20'
department:
- _id: LeSa
doi: 10.1021/jacs.9b13450.s002
month: '05'
oa_version: Published Version
publisher: American Chemical Society
related_material:
  record:
  - id: '8040'
    relation: used_in_publication
    status: public
status: public
title: Movies
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2020'
...
---
_id: '9885'
abstract:
- lang: eng
  text: Data obtained from the fine-grained simulations used in Figures 2-5, data
    obtained from the coarse-grained numerical calculations used in Figure 6, and
    a sample script for the fine-grained simulation as a Jupyter notebook (ZIP)
article_processing_charge: No
author:
- first_name: Mehmet C
  full_name: Ucar, Mehmet C
  id: 50B2A802-6007-11E9-A42B-EB23E6697425
  last_name: Ucar
  orcid: 0000-0003-0506-4217
- first_name: Reinhard
  full_name: Lipowsky, Reinhard
  last_name: Lipowsky
citation:
  ama: Ucar MC, Lipowsky R. MURL_Dataz. 2020. doi:<a href="https://doi.org/10.1021/acs.nanolett.9b04445.s002">10.1021/acs.nanolett.9b04445.s002</a>
  apa: Ucar, M. C., &#38; Lipowsky, R. (2020). MURL_Dataz. American Chemical Society
    . <a href="https://doi.org/10.1021/acs.nanolett.9b04445.s002">https://doi.org/10.1021/acs.nanolett.9b04445.s002</a>
  chicago: Ucar, Mehmet C, and Reinhard Lipowsky. “MURL_Dataz.” American Chemical
    Society , 2020. <a href="https://doi.org/10.1021/acs.nanolett.9b04445.s002">https://doi.org/10.1021/acs.nanolett.9b04445.s002</a>.
  ieee: M. C. Ucar and R. Lipowsky, “MURL_Dataz.” American Chemical Society , 2020.
  ista: Ucar MC, Lipowsky R. 2020. MURL_Dataz, American Chemical Society , <a href="https://doi.org/10.1021/acs.nanolett.9b04445.s002">10.1021/acs.nanolett.9b04445.s002</a>.
  mla: Ucar, Mehmet C., and Reinhard Lipowsky. <i>MURL_Dataz</i>. American Chemical
    Society , 2020, doi:<a href="https://doi.org/10.1021/acs.nanolett.9b04445.s002">10.1021/acs.nanolett.9b04445.s002</a>.
  short: M.C. Ucar, R. Lipowsky, (2020).
date_created: 2021-08-11T13:16:03Z
date_published: 2020-01-08T00:00:00Z
date_updated: 2023-08-17T14:07:52Z
day: '08'
department:
- _id: EdHa
doi: 10.1021/acs.nanolett.9b04445.s002
month: '01'
oa_version: Published Version
publisher: 'American Chemical Society '
related_material:
  record:
  - id: '7166'
    relation: used_in_publication
    status: public
status: public
title: MURL_Dataz
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2020'
...
---
_id: '27'
abstract:
- lang: eng
  text: The cerebral cortex is composed of a large variety of distinct cell-types
    including projection neurons, interneurons and glial cells which emerge from distinct
    neural stem cell (NSC) lineages. The vast majority of cortical projection neurons
    and certain classes of glial cells are generated by radial glial progenitor cells
    (RGPs) in a highly orchestrated manner. Recent studies employing single cell analysis
    and clonal lineage tracing suggest that NSC and RGP lineage progression are regulated
    in a profound deterministic manner. In this review we focus on recent advances
    based mainly on correlative phenotypic data emerging from functional genetic studies
    in mice. We establish hypotheses to test in future research and outline a conceptual
    framework how epigenetic cues modulate the generation of cell-type diversity during
    cortical development. This article is protected by copyright. All rights reserved.
acknowledgement: " This work was supported by IST Austria institutional funds; NÖ
  Forschung und Bildung \r\nn[f+b]   (C13-002)   to   SH;   a   program   grant   from
  \  the   Human   Frontiers   Science   Program (RGP0053/2014)  to SH;  the  People
  \ Programme  (Marie  Curie  Actions)  of  the  European  Union’s Seventh Framework
  Programme (FP7/2007-2013) under REA grant agreement No 618444 to SH, and the  European
  \ Research  Council  (ERC)  under  the  European  Union’s  Horizon  2020  research
  \ and innovation programme (grant agreement No 725780 LinPro)to SH.\r\n"
article_processing_charge: Yes (via OA deal)
article_type: review
author:
- first_name: Nicole
  full_name: Amberg, Nicole
  id: 4CD6AAC6-F248-11E8-B48F-1D18A9856A87
  last_name: Amberg
  orcid: 0000-0002-3183-8207
- first_name: Susanne
  full_name: Laukoter, Susanne
  id: 2D6B7A9A-F248-11E8-B48F-1D18A9856A87
  last_name: Laukoter
  orcid: 0000-0002-7903-3010
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
citation:
  ama: Amberg N, Laukoter S, Hippenmeyer S. Epigenetic cues modulating the generation
    of cell type diversity in the cerebral cortex. <i>Journal of Neurochemistry</i>.
    2019;149(1):12-26. doi:<a href="https://doi.org/10.1111/jnc.14601">10.1111/jnc.14601</a>
  apa: Amberg, N., Laukoter, S., &#38; Hippenmeyer, S. (2019). Epigenetic cues modulating
    the generation of cell type diversity in the cerebral cortex. <i>Journal of Neurochemistry</i>.
    Wiley. <a href="https://doi.org/10.1111/jnc.14601">https://doi.org/10.1111/jnc.14601</a>
  chicago: Amberg, Nicole, Susanne Laukoter, and Simon Hippenmeyer. “Epigenetic Cues
    Modulating the Generation of Cell Type Diversity in the Cerebral Cortex.” <i>Journal
    of Neurochemistry</i>. Wiley, 2019. <a href="https://doi.org/10.1111/jnc.14601">https://doi.org/10.1111/jnc.14601</a>.
  ieee: N. Amberg, S. Laukoter, and S. Hippenmeyer, “Epigenetic cues modulating the
    generation of cell type diversity in the cerebral cortex,” <i>Journal of Neurochemistry</i>,
    vol. 149, no. 1. Wiley, pp. 12–26, 2019.
  ista: Amberg N, Laukoter S, Hippenmeyer S. 2019. Epigenetic cues modulating the
    generation of cell type diversity in the cerebral cortex. Journal of Neurochemistry.
    149(1), 12–26.
  mla: Amberg, Nicole, et al. “Epigenetic Cues Modulating the Generation of Cell Type
    Diversity in the Cerebral Cortex.” <i>Journal of Neurochemistry</i>, vol. 149,
    no. 1, Wiley, 2019, pp. 12–26, doi:<a href="https://doi.org/10.1111/jnc.14601">10.1111/jnc.14601</a>.
  short: N. Amberg, S. Laukoter, S. Hippenmeyer, Journal of Neurochemistry 149 (2019)
    12–26.
date_created: 2018-12-11T11:44:14Z
date_published: 2019-04-01T00:00:00Z
date_updated: 2023-09-11T13:40:26Z
day: '01'
ddc:
- '570'
department:
- _id: SiHi
doi: 10.1111/jnc.14601
ec_funded: 1
external_id:
  isi:
  - '000462680200002'
file:
- access_level: open_access
  checksum: db027721a95d36f5de36aadcd0bdf7e6
  content_type: application/pdf
  creator: kschuh
  date_created: 2020-01-07T13:35:52Z
  date_updated: 2020-07-14T12:45:45Z
  file_id: '7239'
  file_name: 2019_Wiley_Amberg.pdf
  file_size: 889709
  relation: main_file
file_date_updated: 2020-07-14T12:45:45Z
has_accepted_license: '1'
intvolume: '       149'
isi: 1
issue: '1'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
page: 12-26
project:
- _id: 25D92700-B435-11E9-9278-68D0E5697425
  grant_number: LS13-002
  name: Mapping Cell-Type Specificity of the Genomic Imprintome in the Brain
- _id: 25D7962E-B435-11E9-9278-68D0E5697425
  grant_number: RGP0053/2014
  name: Quantitative Structure-Function Analysis of Cerebral Cortex Assembly at Clonal
    Level
- _id: 25D61E48-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '618444'
  name: Molecular Mechanisms of Cerebral Cortex Development
- _id: 260018B0-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '725780'
  name: Principles of Neural Stem Cell Lineage Progression in Cerebral Cortex Development
publication: Journal of Neurochemistry
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: Epigenetic cues modulating the generation of cell type diversity in the cerebral
  cortex
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 149
year: '2019'
...
---
_id: '301'
abstract:
- lang: eng
  text: A representation formula for solutions of stochastic partial differential
    equations with Dirichlet boundary conditions is proved. The scope of our setting
    is wide enough to cover the general situation when the backward characteristics
    that appear in the usual formulation are not even defined in the Itô sense.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Mate
  full_name: Gerencser, Mate
  id: 44ECEDF2-F248-11E8-B48F-1D18A9856A87
  last_name: Gerencser
- first_name: István
  full_name: Gyöngy, István
  last_name: Gyöngy
citation:
  ama: Gerencser M, Gyöngy I. A Feynman–Kac formula for stochastic Dirichlet problems.
    <i>Stochastic Processes and their Applications</i>. 2019;129(3):995-1012. doi:<a
    href="https://doi.org/10.1016/j.spa.2018.04.003">10.1016/j.spa.2018.04.003</a>
  apa: Gerencser, M., &#38; Gyöngy, I. (2019). A Feynman–Kac formula for stochastic
    Dirichlet problems. <i>Stochastic Processes and Their Applications</i>. Elsevier.
    <a href="https://doi.org/10.1016/j.spa.2018.04.003">https://doi.org/10.1016/j.spa.2018.04.003</a>
  chicago: Gerencser, Mate, and István Gyöngy. “A Feynman–Kac Formula for Stochastic
    Dirichlet Problems.” <i>Stochastic Processes and Their Applications</i>. Elsevier,
    2019. <a href="https://doi.org/10.1016/j.spa.2018.04.003">https://doi.org/10.1016/j.spa.2018.04.003</a>.
  ieee: M. Gerencser and I. Gyöngy, “A Feynman–Kac formula for stochastic Dirichlet
    problems,” <i>Stochastic Processes and their Applications</i>, vol. 129, no. 3.
    Elsevier, pp. 995–1012, 2019.
  ista: Gerencser M, Gyöngy I. 2019. A Feynman–Kac formula for stochastic Dirichlet
    problems. Stochastic Processes and their Applications. 129(3), 995–1012.
  mla: Gerencser, Mate, and István Gyöngy. “A Feynman–Kac Formula for Stochastic Dirichlet
    Problems.” <i>Stochastic Processes and Their Applications</i>, vol. 129, no. 3,
    Elsevier, 2019, pp. 995–1012, doi:<a href="https://doi.org/10.1016/j.spa.2018.04.003">10.1016/j.spa.2018.04.003</a>.
  short: M. Gerencser, I. Gyöngy, Stochastic Processes and Their Applications 129
    (2019) 995–1012.
date_created: 2018-12-11T11:45:42Z
date_published: 2019-03-01T00:00:00Z
date_updated: 2023-08-24T14:20:49Z
day: '01'
department:
- _id: JaMa
doi: 10.1016/j.spa.2018.04.003
external_id:
  arxiv:
  - '1611.04177'
  isi:
  - '000458945300012'
intvolume: '       129'
isi: 1
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1611.04177
month: '03'
oa: 1
oa_version: Preprint
page: 995-1012
publication: Stochastic Processes and their Applications
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: A Feynman–Kac formula for stochastic Dirichlet problems
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 129
year: '2019'
...
---
_id: '319'
abstract:
- lang: eng
  text: We study spaces of modelled distributions with singular behaviour near the
    boundary of a domain that, in the context of the theory of regularity structures,
    allow one to give robust solution theories for singular stochastic PDEs with boundary
    conditions. The calculus of modelled distributions established in Hairer (Invent
    Math 198(2):269–504, 2014. https://doi.org/10.1007/s00222-014-0505-4) is extended
    to this setting. We formulate and solve fixed point problems in these spaces with
    a class of kernels that is sufficiently large to cover in particular the Dirichlet
    and Neumann heat kernels. These results are then used to provide solution theories
    for the KPZ equation with Dirichlet and Neumann boundary conditions and for the
    2D generalised parabolic Anderson model with Dirichlet boundary conditions. In
    the case of the KPZ equation with Neumann boundary conditions, we show that, depending
    on the class of mollifiers one considers, a “boundary renormalisation” takes place.
    In other words, there are situations in which a certain boundary condition is
    applied to an approximation to the KPZ equation, but the limiting process is the
    Hopf–Cole solution to the KPZ equation with a different boundary condition.
acknowledgement: "MG thanks the support of the LMS Postdoctoral Mobility Grant.\r\n\r\n"
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Mate
  full_name: Gerencser, Mate
  id: 44ECEDF2-F248-11E8-B48F-1D18A9856A87
  last_name: Gerencser
- first_name: Martin
  full_name: Hairer, Martin
  last_name: Hairer
citation:
  ama: Gerencser M, Hairer M. Singular SPDEs in domains with boundaries. <i>Probability
    Theory and Related Fields</i>. 2019;173(3-4):697–758. doi:<a href="https://doi.org/10.1007/s00440-018-0841-1">10.1007/s00440-018-0841-1</a>
  apa: Gerencser, M., &#38; Hairer, M. (2019). Singular SPDEs in domains with boundaries.
    <i>Probability Theory and Related Fields</i>. Springer. <a href="https://doi.org/10.1007/s00440-018-0841-1">https://doi.org/10.1007/s00440-018-0841-1</a>
  chicago: Gerencser, Mate, and Martin Hairer. “Singular SPDEs in Domains with Boundaries.”
    <i>Probability Theory and Related Fields</i>. Springer, 2019. <a href="https://doi.org/10.1007/s00440-018-0841-1">https://doi.org/10.1007/s00440-018-0841-1</a>.
  ieee: M. Gerencser and M. Hairer, “Singular SPDEs in domains with boundaries,” <i>Probability
    Theory and Related Fields</i>, vol. 173, no. 3–4. Springer, pp. 697–758, 2019.
  ista: Gerencser M, Hairer M. 2019. Singular SPDEs in domains with boundaries. Probability
    Theory and Related Fields. 173(3–4), 697–758.
  mla: Gerencser, Mate, and Martin Hairer. “Singular SPDEs in Domains with Boundaries.”
    <i>Probability Theory and Related Fields</i>, vol. 173, no. 3–4, Springer, 2019,
    pp. 697–758, doi:<a href="https://doi.org/10.1007/s00440-018-0841-1">10.1007/s00440-018-0841-1</a>.
  short: M. Gerencser, M. Hairer, Probability Theory and Related Fields 173 (2019)
    697–758.
date_created: 2018-12-11T11:45:48Z
date_published: 2019-04-01T00:00:00Z
date_updated: 2023-08-24T14:38:32Z
day: '01'
ddc:
- '510'
department:
- _id: JaMa
doi: 10.1007/s00440-018-0841-1
external_id:
  isi:
  - '000463613800001'
file:
- access_level: open_access
  checksum: 288d16ef7291242f485a9660979486e3
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  creator: dernst
  date_created: 2018-12-17T16:25:24Z
  date_updated: 2020-07-14T12:46:03Z
  file_id: '5722'
  file_name: 2018_ProbTheory_Gerencser.pdf
  file_size: 893182
  relation: main_file
file_date_updated: 2020-07-14T12:46:03Z
has_accepted_license: '1'
intvolume: '       173'
isi: 1
issue: 3-4
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
page: 697–758
project:
- _id: B67AFEDC-15C9-11EA-A837-991A96BB2854
  name: IST Austria Open Access Fund
publication: Probability Theory and Related Fields
publication_identifier:
  eissn:
  - '14322064'
  issn:
  - '01788051'
publication_status: published
publisher: Springer
publist_id: '7546'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Singular SPDEs in domains with boundaries
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 173
year: '2019'
...
---
_id: '10874'
abstract:
- lang: eng
  text: In this article we prove an analogue of a theorem of Lachaud, Ritzenthaler,
    and Zykin, which allows us to connect invariants of binary octics to Siegel modular
    forms of genus 3. We use this connection to show that certain modular functions,
    when restricted to the hyperelliptic locus, assume values whose denominators are
    products of powers of primes of bad reduction for the associated hyperelliptic
    curves. We illustrate our theorem with explicit computations. This work is motivated
    by the study of the values of these modular functions at CM points of the Siegel
    upper half-space, which, if their denominators are known, can be used to effectively
    compute models of (hyperelliptic, in our case) curves with CM.
acknowledgement: "The authors would like to thank the Lorentz Center in Leiden for
  hosting the Women in Numbers Europe 2 workshop and providing a productive and enjoyable
  environment for our initial work on this project. We are grateful to the organizers
  of WIN-E2, Irene Bouw, Rachel Newton and Ekin Ozman, for making this conference
  and this collaboration possible. We\r\nthank Irene Bouw and Christophe Ritzenhaler
  for helpful discussions. Ionica acknowledges support from the Thomas Jefferson Fund
  of the Embassy of France in the United States and the FACE Foundation. Most of Kılıçer’s
  work was carried out during her stay in Universiteit Leiden and Carl von Ossietzky
  Universität Oldenburg. Massierer was supported by the Australian Research Council
  (DP150101689). Vincent is supported by the National Science Foundation under Grant
  No. DMS-1802323 and by the Thomas Jefferson Fund of the Embassy of France in the
  United States and the FACE Foundation. "
article_number: '9'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Sorina
  full_name: Ionica, Sorina
  last_name: Ionica
- first_name: Pınar
  full_name: Kılıçer, Pınar
  last_name: Kılıçer
- first_name: Kristin
  full_name: Lauter, Kristin
  last_name: Lauter
- first_name: Elisa
  full_name: Lorenzo García, Elisa
  last_name: Lorenzo García
- first_name: Maria-Adelina
  full_name: Manzateanu, Maria-Adelina
  id: be8d652e-a908-11ec-82a4-e2867729459c
  last_name: Manzateanu
- first_name: Maike
  full_name: Massierer, Maike
  last_name: Massierer
- first_name: Christelle
  full_name: Vincent, Christelle
  last_name: Vincent
citation:
  ama: Ionica S, Kılıçer P, Lauter K, et al. Modular invariants for genus 3 hyperelliptic
    curves. <i>Research in Number Theory</i>. 2019;5. doi:<a href="https://doi.org/10.1007/s40993-018-0146-6">10.1007/s40993-018-0146-6</a>
  apa: Ionica, S., Kılıçer, P., Lauter, K., Lorenzo García, E., Manzateanu, M.-A.,
    Massierer, M., &#38; Vincent, C. (2019). Modular invariants for genus 3 hyperelliptic
    curves. <i>Research in Number Theory</i>. Springer Nature. <a href="https://doi.org/10.1007/s40993-018-0146-6">https://doi.org/10.1007/s40993-018-0146-6</a>
  chicago: Ionica, Sorina, Pınar Kılıçer, Kristin Lauter, Elisa Lorenzo García, Maria-Adelina
    Manzateanu, Maike Massierer, and Christelle Vincent. “Modular Invariants for Genus
    3 Hyperelliptic Curves.” <i>Research in Number Theory</i>. Springer Nature, 2019.
    <a href="https://doi.org/10.1007/s40993-018-0146-6">https://doi.org/10.1007/s40993-018-0146-6</a>.
  ieee: S. Ionica <i>et al.</i>, “Modular invariants for genus 3 hyperelliptic curves,”
    <i>Research in Number Theory</i>, vol. 5. Springer Nature, 2019.
  ista: Ionica S, Kılıçer P, Lauter K, Lorenzo García E, Manzateanu M-A, Massierer
    M, Vincent C. 2019. Modular invariants for genus 3 hyperelliptic curves. Research
    in Number Theory. 5, 9.
  mla: Ionica, Sorina, et al. “Modular Invariants for Genus 3 Hyperelliptic Curves.”
    <i>Research in Number Theory</i>, vol. 5, 9, Springer Nature, 2019, doi:<a href="https://doi.org/10.1007/s40993-018-0146-6">10.1007/s40993-018-0146-6</a>.
  short: S. Ionica, P. Kılıçer, K. Lauter, E. Lorenzo García, M.-A. Manzateanu, M.
    Massierer, C. Vincent, Research in Number Theory 5 (2019).
date_created: 2022-03-18T12:09:48Z
date_published: 2019-01-02T00:00:00Z
date_updated: 2023-09-05T15:39:31Z
day: '02'
department:
- _id: TiBr
doi: 10.1007/s40993-018-0146-6
external_id:
  arxiv:
  - '1807.08986'
intvolume: '         5'
keyword:
- Algebra and Number Theory
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1807.08986
month: '01'
oa: 1
oa_version: Preprint
publication: Research in Number Theory
publication_identifier:
  eissn:
  - 2363-9555
  issn:
  - 2522-0160
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Modular invariants for genus 3 hyperelliptic curves
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 5
year: '2019'
...
---
_id: '10877'
abstract:
- lang: eng
  text: 'This report presents the results of a friendly competition for formal verification
    of continuous and hybrid systems with piecewise constant dynamics. The friendly
    competition took place as part of the workshop Applied Verification for Continuous
    and Hybrid Systems (ARCH) in 2019. In this third edition, six tools have been
    applied to solve five different benchmark problems in the category for piecewise
    constant dynamics: BACH, Lyse, Hy- COMP, PHAVer/SX, PHAVerLite, and VeriSiMPL.
    Compared to last year, a new tool has participated (HyCOMP) and PHAVerLite has
    replaced PHAVer-lite. The result is a snap- shot of the current landscape of tools
    and the types of benchmarks they are particularly suited for. Due to the diversity
    of problems, we are not ranking tools, yet the presented results probably provide
    the most complete assessment of tools for the safety verification of continuous
    and hybrid systems with piecewise constant dynamics up to this date.'
acknowledgement: "The authors gratefully acknowledge \fnancial support by the European
  Commission project\r\nUnCoVerCPS under grant number 643921. Lei Bu is supported
  by the National Natural Science\r\nFoundation of China (No.61572249)."
alternative_title:
- EPiC Series in Computing
article_processing_charge: No
author:
- first_name: Goran
  full_name: Frehse, Goran
  last_name: Frehse
- first_name: Alessandro
  full_name: Abate, Alessandro
  last_name: Abate
- first_name: Dieky
  full_name: Adzkiya, Dieky
  last_name: Adzkiya
- first_name: Anna
  full_name: Becchi, Anna
  last_name: Becchi
- first_name: Lei
  full_name: Bu, Lei
  last_name: Bu
- first_name: Alessandro
  full_name: Cimatti, Alessandro
  last_name: Cimatti
- first_name: Mirco
  full_name: Giacobbe, Mirco
  id: 3444EA5E-F248-11E8-B48F-1D18A9856A87
  last_name: Giacobbe
  orcid: 0000-0001-8180-0904
- first_name: Alberto
  full_name: Griggio, Alberto
  last_name: Griggio
- first_name: Sergio
  full_name: Mover, Sergio
  last_name: Mover
- first_name: Muhammad Syifa'ul
  full_name: Mufid, Muhammad Syifa'ul
  last_name: Mufid
- first_name: Idriss
  full_name: Riouak, Idriss
  last_name: Riouak
- first_name: Stefano
  full_name: Tonetta, Stefano
  last_name: Tonetta
- first_name: Enea
  full_name: Zaffanella, Enea
  last_name: Zaffanella
citation:
  ama: 'Frehse G, Abate A, Adzkiya D, et al. ARCH-COMP19 Category Report: Hybrid systems
    with piecewise constant dynamics. In: Frehse G, Althoff M, eds. <i>ARCH19. 6th
    International Workshop on Applied Verification of Continuous and Hybrid Systems</i>.
    Vol 61. EasyChair; 2019:1-13. doi:<a href="https://doi.org/10.29007/rjwn">10.29007/rjwn</a>'
  apa: 'Frehse, G., Abate, A., Adzkiya, D., Becchi, A., Bu, L., Cimatti, A., … Zaffanella,
    E. (2019). ARCH-COMP19 Category Report: Hybrid systems with piecewise constant
    dynamics. In G. Frehse &#38; M. Althoff (Eds.), <i>ARCH19. 6th International Workshop
    on Applied Verification of Continuous and Hybrid Systems</i> (Vol. 61, pp. 1–13).
    Montreal, Canada: EasyChair. <a href="https://doi.org/10.29007/rjwn">https://doi.org/10.29007/rjwn</a>'
  chicago: 'Frehse, Goran, Alessandro Abate, Dieky Adzkiya, Anna Becchi, Lei Bu, Alessandro
    Cimatti, Mirco Giacobbe, et al. “ARCH-COMP19 Category Report: Hybrid Systems with
    Piecewise Constant Dynamics.” In <i>ARCH19. 6th International Workshop on Applied
    Verification of Continuous and Hybrid Systems</i>, edited by Goran Frehse and
    Matthias Althoff, 61:1–13. EasyChair, 2019. <a href="https://doi.org/10.29007/rjwn">https://doi.org/10.29007/rjwn</a>.'
  ieee: 'G. Frehse <i>et al.</i>, “ARCH-COMP19 Category Report: Hybrid systems with
    piecewise constant dynamics,” in <i>ARCH19. 6th International Workshop on Applied
    Verification of Continuous and Hybrid Systems</i>, Montreal, Canada, 2019, vol.
    61, pp. 1–13.'
  ista: 'Frehse G, Abate A, Adzkiya D, Becchi A, Bu L, Cimatti A, Giacobbe M, Griggio
    A, Mover S, Mufid MS, Riouak I, Tonetta S, Zaffanella E. 2019. ARCH-COMP19 Category
    Report: Hybrid systems with piecewise constant dynamics. ARCH19. 6th International
    Workshop on Applied Verification of Continuous and Hybrid Systems. ARCH: International
    Workshop on Applied Verification on Continuous and Hybrid Systems, EPiC Series
    in Computing, vol. 61, 1–13.'
  mla: 'Frehse, Goran, et al. “ARCH-COMP19 Category Report: Hybrid Systems with Piecewise
    Constant Dynamics.” <i>ARCH19. 6th International Workshop on Applied Verification
    of Continuous and Hybrid Systems</i>, edited by Goran Frehse and Matthias Althoff,
    vol. 61, EasyChair, 2019, pp. 1–13, doi:<a href="https://doi.org/10.29007/rjwn">10.29007/rjwn</a>.'
  short: G. Frehse, A. Abate, D. Adzkiya, A. Becchi, L. Bu, A. Cimatti, M. Giacobbe,
    A. Griggio, S. Mover, M.S. Mufid, I. Riouak, S. Tonetta, E. Zaffanella, in:, G.
    Frehse, M. Althoff (Eds.), ARCH19. 6th International Workshop on Applied Verification
    of Continuous and Hybrid Systems, EasyChair, 2019, pp. 1–13.
conference:
  end_date: 2019-04-15
  location: Montreal, Canada
  name: 'ARCH: International Workshop on Applied Verification on Continuous and Hybrid
    Systems'
  start_date: 2019-04-15
date_created: 2022-03-18T12:29:23Z
date_published: 2019-05-25T00:00:00Z
date_updated: 2022-05-17T07:09:47Z
day: '25'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.29007/rjwn
editor:
- first_name: Goran
  full_name: Frehse, Goran
  last_name: Frehse
- first_name: Matthias
  full_name: Althoff, Matthias
  last_name: Althoff
file:
- access_level: open_access
  checksum: 4b92e333db7b4e2349501a804dfede69
  content_type: application/pdf
  creator: dernst
  date_created: 2022-05-17T06:55:49Z
  date_updated: 2022-05-17T06:55:49Z
  file_id: '11391'
  file_name: 2019_EPiCs_Frehse.pdf
  file_size: 346415
  relation: main_file
  success: 1
file_date_updated: 2022-05-17T06:55:49Z
has_accepted_license: '1'
intvolume: '        61'
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
page: 1-13
publication: ARCH19. 6th International Workshop on Applied Verification of Continuous
  and Hybrid Systems
publication_identifier:
  issn:
  - 2398-7340
publication_status: published
publisher: EasyChair
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'ARCH-COMP19 Category Report: Hybrid systems with piecewise constant dynamics'
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 61
year: '2019'
...
---
_id: '10878'
abstract:
- lang: eng
  text: Starting from a microscopic model for a system of neurons evolving in time
    which individually follow a stochastic integrate-and-fire type model, we study
    a mean-field limit of the system. Our model is described by a system of SDEs with
    discontinuous coefficients for the action potential of each neuron and takes into
    account the (random) spatial configuration of neurons allowing the interaction
    to depend on it. In the limit as the number of particles tends to infinity, we
    obtain a nonlinear Fokker-Planck type PDE in two variables, with derivatives only
    with respect to one variable and discontinuous coefficients. We also study strong
    well-posedness of the system of SDEs and prove the existence and uniqueness of
    a weak measure-valued solution to the PDE, obtained as the limit of the laws of
    the empirical measures for the system of particles.
acknowledgement: "The second author has been partially supported by INdAM through
  the GNAMPA Research\r\nProject (2017) “Sistemi stocastici singolari: buona posizione
  e problemi di controllo”. The third\r\nauthor was partly funded by the Austrian
  Science Fund (FWF) project F 65."
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Franco
  full_name: Flandoli, Franco
  last_name: Flandoli
- first_name: Enrico
  full_name: Priola, Enrico
  last_name: Priola
- first_name: Giovanni A
  full_name: Zanco, Giovanni A
  id: 47491882-F248-11E8-B48F-1D18A9856A87
  last_name: Zanco
citation:
  ama: Flandoli F, Priola E, Zanco GA. A mean-field model with discontinuous coefficients
    for neurons with spatial interaction. <i>Discrete and Continuous Dynamical Systems</i>.
    2019;39(6):3037-3067. doi:<a href="https://doi.org/10.3934/dcds.2019126">10.3934/dcds.2019126</a>
  apa: Flandoli, F., Priola, E., &#38; Zanco, G. A. (2019). A mean-field model with
    discontinuous coefficients for neurons with spatial interaction. <i>Discrete and
    Continuous Dynamical Systems</i>. American Institute of Mathematical Sciences.
    <a href="https://doi.org/10.3934/dcds.2019126">https://doi.org/10.3934/dcds.2019126</a>
  chicago: Flandoli, Franco, Enrico Priola, and Giovanni A Zanco. “A Mean-Field Model
    with Discontinuous Coefficients for Neurons with Spatial Interaction.” <i>Discrete
    and Continuous Dynamical Systems</i>. American Institute of Mathematical Sciences,
    2019. <a href="https://doi.org/10.3934/dcds.2019126">https://doi.org/10.3934/dcds.2019126</a>.
  ieee: F. Flandoli, E. Priola, and G. A. Zanco, “A mean-field model with discontinuous
    coefficients for neurons with spatial interaction,” <i>Discrete and Continuous
    Dynamical Systems</i>, vol. 39, no. 6. American Institute of Mathematical Sciences,
    pp. 3037–3067, 2019.
  ista: Flandoli F, Priola E, Zanco GA. 2019. A mean-field model with discontinuous
    coefficients for neurons with spatial interaction. Discrete and Continuous Dynamical
    Systems. 39(6), 3037–3067.
  mla: Flandoli, Franco, et al. “A Mean-Field Model with Discontinuous Coefficients
    for Neurons with Spatial Interaction.” <i>Discrete and Continuous Dynamical Systems</i>,
    vol. 39, no. 6, American Institute of Mathematical Sciences, 2019, pp. 3037–67,
    doi:<a href="https://doi.org/10.3934/dcds.2019126">10.3934/dcds.2019126</a>.
  short: F. Flandoli, E. Priola, G.A. Zanco, Discrete and Continuous Dynamical Systems
    39 (2019) 3037–3067.
date_created: 2022-03-18T12:33:34Z
date_published: 2019-06-01T00:00:00Z
date_updated: 2023-09-08T11:34:45Z
day: '01'
department:
- _id: JaMa
doi: 10.3934/dcds.2019126
external_id:
  arxiv:
  - '1708.04156'
  isi:
  - '000459954800003'
intvolume: '        39'
isi: 1
issue: '6'
keyword:
- Applied Mathematics
- Discrete Mathematics and Combinatorics
- Analysis
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1708.04156
month: '06'
oa: 1
oa_version: Preprint
page: 3037-3067
project:
- _id: fc31cba2-9c52-11eb-aca3-ff467d239cd2
  grant_number: F6504
  name: Taming Complexity in Partial Differential Systems
publication: Discrete and Continuous Dynamical Systems
publication_identifier:
  issn:
  - 1553-5231
publication_status: published
publisher: American Institute of Mathematical Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: A mean-field model with discontinuous coefficients for neurons with spatial
  interaction
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 39
year: '2019'
...
---
_id: '10879'
abstract:
- lang: eng
  text: We study effects of a bounded and compactly supported perturbation on multidimensional
    continuum random Schrödinger operators in the region of complete localisation.
    Our main emphasis is on Anderson orthogonality for random Schrödinger operators.
    Among others, we prove that Anderson orthogonality does occur for Fermi energies
    in the region of complete localisation with a non-zero probability. This partially
    confirms recent non-rigorous findings [V. Khemani et al., Nature Phys. 11 (2015),
    560–565]. The spectral shift function plays an important role in our analysis
    of Anderson orthogonality. We identify it with the index of the corresponding
    pair of spectral projections and explore the consequences thereof. All our results
    rely on the main technical estimate of this paper which guarantees separate exponential
    decay of the disorder-averaged Schatten p-norm of χa(f(H)−f(Hτ))χb in a and b.
    Here, Hτ is a perturbation of the random Schrödinger operator H, χa is the multiplication
    operator corresponding to the indicator function of a unit cube centred about
    a∈Rd, and f is in a suitable class of functions of bounded variation with distributional
    derivative supported in the region of complete localisation for H.
acknowledgement: M.G. was supported by the DFG under grant GE 2871/1-1.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Adrian M
  full_name: Dietlein, Adrian M
  id: 317CB464-F248-11E8-B48F-1D18A9856A87
  last_name: Dietlein
- first_name: Martin
  full_name: Gebert, Martin
  last_name: Gebert
- first_name: Peter
  full_name: Müller, Peter
  last_name: Müller
citation:
  ama: Dietlein AM, Gebert M, Müller P. Perturbations of continuum random Schrödinger
    operators with applications to Anderson orthogonality and the spectral shift function.
    <i>Journal of Spectral Theory</i>. 2019;9(3):921-965. doi:<a href="https://doi.org/10.4171/jst/267">10.4171/jst/267</a>
  apa: Dietlein, A. M., Gebert, M., &#38; Müller, P. (2019). Perturbations of continuum
    random Schrödinger operators with applications to Anderson orthogonality and the
    spectral shift function. <i>Journal of Spectral Theory</i>. European Mathematical
    Society Publishing House. <a href="https://doi.org/10.4171/jst/267">https://doi.org/10.4171/jst/267</a>
  chicago: Dietlein, Adrian M, Martin Gebert, and Peter Müller. “Perturbations of
    Continuum Random Schrödinger Operators with Applications to Anderson Orthogonality
    and the Spectral Shift Function.” <i>Journal of Spectral Theory</i>. European
    Mathematical Society Publishing House, 2019. <a href="https://doi.org/10.4171/jst/267">https://doi.org/10.4171/jst/267</a>.
  ieee: A. M. Dietlein, M. Gebert, and P. Müller, “Perturbations of continuum random
    Schrödinger operators with applications to Anderson orthogonality and the spectral
    shift function,” <i>Journal of Spectral Theory</i>, vol. 9, no. 3. European Mathematical
    Society Publishing House, pp. 921–965, 2019.
  ista: Dietlein AM, Gebert M, Müller P. 2019. Perturbations of continuum random Schrödinger
    operators with applications to Anderson orthogonality and the spectral shift function.
    Journal of Spectral Theory. 9(3), 921–965.
  mla: Dietlein, Adrian M., et al. “Perturbations of Continuum Random Schrödinger
    Operators with Applications to Anderson Orthogonality and the Spectral Shift Function.”
    <i>Journal of Spectral Theory</i>, vol. 9, no. 3, European Mathematical Society
    Publishing House, 2019, pp. 921–65, doi:<a href="https://doi.org/10.4171/jst/267">10.4171/jst/267</a>.
  short: A.M. Dietlein, M. Gebert, P. Müller, Journal of Spectral Theory 9 (2019)
    921–965.
date_created: 2022-03-18T12:36:42Z
date_published: 2019-03-01T00:00:00Z
date_updated: 2023-09-08T11:35:31Z
day: '01'
department:
- _id: LaEr
doi: 10.4171/jst/267
external_id:
  arxiv:
  - '1701.02956'
  isi:
  - '000484709400006'
intvolume: '         9'
isi: 1
issue: '3'
keyword:
- Random Schrödinger operators
- spectral shift function
- Anderson orthogonality
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1701.02956
month: '03'
oa: 1
oa_version: Preprint
page: 921-965
publication: Journal of Spectral Theory
publication_identifier:
  issn:
  - 1664-039X
publication_status: published
publisher: European Mathematical Society Publishing House
quality_controlled: '1'
scopus_import: '1'
status: public
title: Perturbations of continuum random Schrödinger operators with applications to
  Anderson orthogonality and the spectral shift function
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 9
year: '2019'
...
---
_id: '11222'
acknowledgement: This work was supported by the ERC and EU Horizon 2020 (ERC 692692;
  MSC-IF 708497) and FWF Z 312-B27 Wittgenstein award; W 1205-B09).
article_number: A3.27
article_processing_charge: No
author:
- first_name: Olena
  full_name: Kim, Olena
  id: 3F8ABDDA-F248-11E8-B48F-1D18A9856A87
  last_name: Kim
- first_name: Carolina
  full_name: Borges Merjane, Carolina
  id: 4305C450-F248-11E8-B48F-1D18A9856A87
  last_name: Borges Merjane
  orcid: 0000-0003-0005-401X
- first_name: Peter M
  full_name: Jonas, Peter M
  id: 353C1B58-F248-11E8-B48F-1D18A9856A87
  last_name: Jonas
  orcid: 0000-0001-5001-4804
citation:
  ama: 'Kim O, Borges Merjane C, Jonas PM. Functional analysis of the docked vesicle
    pool in hippocampal mossy fiber terminals by electron microscopy. In: <i>Intrinsic
    Activity</i>. Vol 7. Austrian Pharmacological Society; 2019. doi:<a href="https://doi.org/10.25006/ia.7.s1-a3.27">10.25006/ia.7.s1-a3.27</a>'
  apa: 'Kim, O., Borges Merjane, C., &#38; Jonas, P. M. (2019). Functional analysis
    of the docked vesicle pool in hippocampal mossy fiber terminals by electron microscopy.
    In <i>Intrinsic Activity</i> (Vol. 7). Innsbruck, Austria: Austrian Pharmacological
    Society. <a href="https://doi.org/10.25006/ia.7.s1-a3.27">https://doi.org/10.25006/ia.7.s1-a3.27</a>'
  chicago: Kim, Olena, Carolina Borges Merjane, and Peter M Jonas. “Functional Analysis
    of the Docked Vesicle Pool in Hippocampal Mossy Fiber Terminals by Electron Microscopy.”
    In <i>Intrinsic Activity</i>, Vol. 7. Austrian Pharmacological Society, 2019.
    <a href="https://doi.org/10.25006/ia.7.s1-a3.27">https://doi.org/10.25006/ia.7.s1-a3.27</a>.
  ieee: O. Kim, C. Borges Merjane, and P. M. Jonas, “Functional analysis of the docked
    vesicle pool in hippocampal mossy fiber terminals by electron microscopy,” in
    <i>Intrinsic Activity</i>, Innsbruck, Austria, 2019, vol. 7, no. Suppl. 1.
  ista: 'Kim O, Borges Merjane C, Jonas PM. 2019. Functional analysis of the docked
    vesicle pool in hippocampal mossy fiber terminals by electron microscopy. Intrinsic
    Activity. ANA: Austrian Neuroscience Association ; APHAR: Austrian Pharmacological
    Society vol. 7, A3.27.'
  mla: Kim, Olena, et al. “Functional Analysis of the Docked Vesicle Pool in Hippocampal
    Mossy Fiber Terminals by Electron Microscopy.” <i>Intrinsic Activity</i>, vol.
    7, no. Suppl. 1, A3.27, Austrian Pharmacological Society, 2019, doi:<a href="https://doi.org/10.25006/ia.7.s1-a3.27">10.25006/ia.7.s1-a3.27</a>.
  short: O. Kim, C. Borges Merjane, P.M. Jonas, in:, Intrinsic Activity, Austrian
    Pharmacological Society, 2019.
conference:
  end_date: 2019-09-27
  location: Innsbruck, Austria
  name: 'ANA: Austrian Neuroscience Association ; APHAR: Austrian Pharmacological
    Society'
  start_date: 2019-09-25
date_created: 2022-04-20T15:06:05Z
date_published: 2019-09-11T00:00:00Z
date_updated: 2024-03-25T23:30:04Z
day: '11'
department:
- _id: PeJo
doi: 10.25006/ia.7.s1-a3.27
ec_funded: 1
intvolume: '         7'
issue: Suppl. 1
keyword:
- hippocampus
- mossy fibers
- readily releasable pool
- electron microscopy
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.intrinsicactivity.org/2019/7/S1/A3.27/
month: '09'
oa: 1
oa_version: Published Version
project:
- _id: 25B7EB9E-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '692692'
  name: Biophysics and circuit function of a giant cortical glumatergic synapse
- _id: 25BAF7B2-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '708497'
  name: Presynaptic calcium channels distribution and impact on coupling at the hippocampal
    mossy fiber synapse
- _id: 25C3DBB6-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: W01205
  name: Zellkommunikation in Gesundheit und Krankheit
- _id: 25C5A090-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: Z00312
  name: The Wittgenstein Prize
publication: Intrinsic Activity
publication_identifier:
  issn:
  - 2309-8503
publication_status: published
publisher: Austrian Pharmacological Society
quality_controlled: '1'
related_material:
  record:
  - id: '11196'
    relation: dissertation_contains
    status: public
status: public
title: Functional analysis of the docked vesicle pool in hippocampal mossy fiber terminals
  by electron microscopy
type: conference_abstract
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 7
year: '2019'
...
---
_id: '7950'
abstract:
- lang: eng
  text: "The input to the token swapping problem is a graph with vertices v1, v2,
    . . . , vn, and n tokens with labels 1,2, . . . , n, one on each vertex.  The
    goal is to get token i to vertex vi for all i= 1, . . . , n using a minimum number
    of swaps, where a swap exchanges the tokens on the endpoints of an edge.Token
    swapping on a tree, also known as “sorting with a transposition tree,” is not
    known to be in P nor NP-complete.  We present some partial results:\r\n1.  An
    optimum swap sequence may need to perform a swap on a leaf vertex that has the
    correct token (a “happy leaf”), disproving a conjecture of Vaughan.\r\n2.  Any
    algorithm that fixes happy leaves—as all known approximation algorithms for the
    problem do—has approximation factor at least 4/3.  Furthermore, the two best-known
    2-approximation algorithms have approximation factor exactly 2.\r\n3.  A generalized
    problem—weighted coloured token swapping—is NP-complete on trees, but solvable
    in polynomial time on paths and stars.  In this version, tokens and  vertices
    \ have  colours,  and  colours  have  weights.   The  goal  is  to  get  every
    token to a vertex of the same colour, and the cost of a swap is the sum of the
    weights of the two tokens involved."
article_number: '1903.06981'
article_processing_charge: No
arxiv: 1
author:
- first_name: Ahmad
  full_name: Biniaz, Ahmad
  last_name: Biniaz
- first_name: Kshitij
  full_name: Jain, Kshitij
  last_name: Jain
- first_name: Anna
  full_name: Lubiw, Anna
  last_name: Lubiw
- first_name: Zuzana
  full_name: Masárová, Zuzana
  id: 45CFE238-F248-11E8-B48F-1D18A9856A87
  last_name: Masárová
  orcid: 0000-0002-6660-1322
- first_name: Tillmann
  full_name: Miltzow, Tillmann
  last_name: Miltzow
- first_name: Debajyoti
  full_name: Mondal, Debajyoti
  last_name: Mondal
- first_name: Anurag Murty
  full_name: Naredla, Anurag Murty
  last_name: Naredla
- first_name: Josef
  full_name: Tkadlec, Josef
  id: 3F24CCC8-F248-11E8-B48F-1D18A9856A87
  last_name: Tkadlec
  orcid: 0000-0002-1097-9684
- first_name: Alexi
  full_name: Turcotte, Alexi
  last_name: Turcotte
citation:
  ama: Biniaz A, Jain K, Lubiw A, et al. Token swapping on trees. <i>arXiv</i>.
  apa: Biniaz, A., Jain, K., Lubiw, A., Masárová, Z., Miltzow, T., Mondal, D., … Turcotte,
    A. (n.d.). Token swapping on trees. <i>arXiv</i>.
  chicago: Biniaz, Ahmad, Kshitij Jain, Anna Lubiw, Zuzana Masárová, Tillmann Miltzow,
    Debajyoti Mondal, Anurag Murty Naredla, Josef Tkadlec, and Alexi Turcotte. “Token
    Swapping on Trees.” <i>ArXiv</i>, n.d.
  ieee: A. Biniaz <i>et al.</i>, “Token swapping on trees,” <i>arXiv</i>. .
  ista: Biniaz A, Jain K, Lubiw A, Masárová Z, Miltzow T, Mondal D, Naredla AM, Tkadlec
    J, Turcotte A. Token swapping on trees. arXiv, 1903.06981.
  mla: Biniaz, Ahmad, et al. “Token Swapping on Trees.” <i>ArXiv</i>, 1903.06981.
  short: A. Biniaz, K. Jain, A. Lubiw, Z. Masárová, T. Miltzow, D. Mondal, A.M. Naredla,
    J. Tkadlec, A. Turcotte, ArXiv (n.d.).
date_created: 2020-06-08T12:25:25Z
date_published: 2019-03-16T00:00:00Z
date_updated: 2024-01-04T12:42:08Z
day: '16'
department:
- _id: HeEd
- _id: UlWa
- _id: KrCh
external_id:
  arxiv:
  - '1903.06981'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1903.06981
month: '03'
oa: 1
oa_version: Preprint
publication: arXiv
publication_status: submitted
related_material:
  record:
  - id: '7944'
    relation: dissertation_contains
    status: public
  - id: '12833'
    relation: later_version
    status: public
status: public
title: Token swapping on trees
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2019'
...
---
_id: '8'
abstract:
- lang: eng
  text: Despite their different origins, Drosophila glia and hemocytes are related
    cell populations that provide an immune function. Drosophila hemocytes patrol
    the body cavity and act as macrophages outside the nervous system whereas glia
    originate from the neuroepithelium and provide the scavenger population of the
    nervous system. Drosophila glia are hence the functional orthologs of vertebrate
    microglia, even though the latter are cells of immune origin that subsequently
    move into the brain during development. Interestingly, the Drosophila immune cells
    within (glia) and outside the nervous system (hemocytes) require the same transcription
    factor Glide/Gcm for their development. This raises the issue of how do glia specifically
    differentiate in the nervous system and hemocytes in the procephalic mesoderm.
    The Repo homeodomain transcription factor and pan-glial direct target of Glide/Gcm
    is known to ensure glial terminal differentiation. Here we show that Repo also
    takes center stage in the process that discriminates between glia and hemocytes.
    First, Repo expression is repressed in the hemocyte anlagen by mesoderm-specific
    factors. Second, Repo ectopic activation in the procephalic mesoderm is sufficient
    to repress the expression of hemocyte-specific genes. Third, the lack of Repo
    triggers the expression of hemocyte markers in glia. Thus, a complex network of
    tissue-specific cues biases the potential of Glide/Gcm. These data allow us to
    revise the concept of fate determinants and help us understand the bases of cell
    specification. Both sexes were analyzed.SIGNIFICANCE STATEMENTDistinct cell types
    often require the same pioneer transcription factor, raising the issue of how
    does one factor trigger different fates. In Drosophila, glia and hemocytes provide
    a scavenger activity within and outside the nervous system, respectively. While
    they both require the Glide/Gcm transcription factor, glia originate from the
    ectoderm, hemocytes from the mesoderm. Here we show that tissue-specific factors
    inhibit the gliogenic potential of Glide/Gcm in the mesoderm by repressing the
    expression of the homeodomain protein Repo, a major glial-specific target of Glide/Gcm.
    Repo expression in turn inhibits the expression of hemocyte-specific genes in
    the nervous system. These cell-specific networks secure the establishment of the
    glial fate only in the nervous system and allow cell diversification.
acknowledgement: This work was supported by INSERM, CNRS, UDS, Ligue Régionale contre
  le Cancer, Hôpital de Strasbourg, Association pour la Recherche sur le Cancer (ARC)
  and Agence Nationale de la Recherche (ANR) grants. P.B.C. was funded by the ANR
  and by the ARSEP (Fondation pour l'Aide à la Recherche sur la Sclérose en Plaques),
  and G.T. by governmental and ARC fellowships. This work was also supported by grants
  from the Ataxia UK (2491) and the NC3R (NC/L000199/1) awarded to M.F. The Institut
  de Génétique et de Biologie Moléculaire et Cellulaire was also supported by a French
  state fund through the ANR labex. D.E.S. was funded by Marie Curie Grant CIG 334077/IRTIM.
  We thank B. Altenhein, K. Brückner, M. Crozatier, L. Waltzer, M. Logan, E. Kurant,
  R. Reuter, E. Kurucz, J.L Dimarcq, J. Hoffmann, C. Goodman, the DHSB, and the BDSC
  for reagents and flies. We also thank all of the laboratory members for comments
  on the manuscript; C. Diebold, C. Delaporte, M. Pezze, the fly, and imaging and
  antibody facilities for technical assistance; and D. Dembele for help with statistics.
  In addition, we thank Alison Brewer for help with Luciferase assays.
article_processing_charge: No
article_type: original
author:
- first_name: Guillaume
  full_name: Trébuchet, Guillaume
  last_name: Trébuchet
- first_name: Pierre B
  full_name: Cattenoz, Pierre B
  last_name: Cattenoz
- first_name: János
  full_name: Zsámboki, János
  last_name: Zsámboki
- first_name: David
  full_name: Mazaud, David
  last_name: Mazaud
- first_name: Daria E
  full_name: Siekhaus, Daria E
  id: 3D224B9E-F248-11E8-B48F-1D18A9856A87
  last_name: Siekhaus
  orcid: 0000-0001-8323-8353
- first_name: Manolis
  full_name: Fanto, Manolis
  last_name: Fanto
- first_name: Angela
  full_name: Giangrande, Angela
  last_name: Giangrande
citation:
  ama: Trébuchet G, Cattenoz PB, Zsámboki J, et al. The Repo homeodomain transcription
    factor suppresses hematopoiesis in Drosophila and preserves the glial fate. <i>Journal
    of Neuroscience</i>. 2019;39(2):238-255. doi:<a href="https://doi.org/10.1523/JNEUROSCI.1059-18.2018">10.1523/JNEUROSCI.1059-18.2018</a>
  apa: Trébuchet, G., Cattenoz, P. B., Zsámboki, J., Mazaud, D., Siekhaus, D. E.,
    Fanto, M., &#38; Giangrande, A. (2019). The Repo homeodomain transcription factor
    suppresses hematopoiesis in Drosophila and preserves the glial fate. <i>Journal
    of Neuroscience</i>. Society for Neuroscience. <a href="https://doi.org/10.1523/JNEUROSCI.1059-18.2018">https://doi.org/10.1523/JNEUROSCI.1059-18.2018</a>
  chicago: Trébuchet, Guillaume, Pierre B Cattenoz, János Zsámboki, David Mazaud,
    Daria E Siekhaus, Manolis Fanto, and Angela Giangrande. “The Repo Homeodomain
    Transcription Factor Suppresses Hematopoiesis in Drosophila and Preserves the
    Glial Fate.” <i>Journal of Neuroscience</i>. Society for Neuroscience, 2019. <a
    href="https://doi.org/10.1523/JNEUROSCI.1059-18.2018">https://doi.org/10.1523/JNEUROSCI.1059-18.2018</a>.
  ieee: G. Trébuchet <i>et al.</i>, “The Repo homeodomain transcription factor suppresses
    hematopoiesis in Drosophila and preserves the glial fate,” <i>Journal of Neuroscience</i>,
    vol. 39, no. 2. Society for Neuroscience, pp. 238–255, 2019.
  ista: Trébuchet G, Cattenoz PB, Zsámboki J, Mazaud D, Siekhaus DE, Fanto M, Giangrande
    A. 2019. The Repo homeodomain transcription factor suppresses hematopoiesis in
    Drosophila and preserves the glial fate. Journal of Neuroscience. 39(2), 238–255.
  mla: Trébuchet, Guillaume, et al. “The Repo Homeodomain Transcription Factor Suppresses
    Hematopoiesis in Drosophila and Preserves the Glial Fate.” <i>Journal of Neuroscience</i>,
    vol. 39, no. 2, Society for Neuroscience, 2019, pp. 238–55, doi:<a href="https://doi.org/10.1523/JNEUROSCI.1059-18.2018">10.1523/JNEUROSCI.1059-18.2018</a>.
  short: G. Trébuchet, P.B. Cattenoz, J. Zsámboki, D. Mazaud, D.E. Siekhaus, M. Fanto,
    A. Giangrande, Journal of Neuroscience 39 (2019) 238–255.
date_created: 2018-12-11T11:44:07Z
date_published: 2019-01-09T00:00:00Z
date_updated: 2023-09-19T10:10:55Z
day: '09'
ddc:
- '570'
department:
- _id: DaSi
doi: 10.1523/JNEUROSCI.1059-18.2018
ec_funded: 1
external_id:
  isi:
  - '000455189900006'
  pmid:
  - '30504274'
file:
- access_level: open_access
  checksum: 8f6925eb4cd1e8747d8ea25929c68de6
  content_type: application/pdf
  creator: dernst
  date_created: 2020-10-02T09:33:28Z
  date_updated: 2020-10-02T09:33:28Z
  file_id: '8596'
  file_name: 2019_JournNeuroscience_Trebuchet.pdf
  file_size: 9455414
  relation: main_file
  success: 1
file_date_updated: 2020-10-02T09:33:28Z
has_accepted_license: '1'
intvolume: '        39'
isi: 1
issue: '2'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
page: 238-255
pmid: 1
project:
- _id: 2536F660-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '334077'
  name: Investigating the role of transporters in invasive migration through junctions
publication: Journal of Neuroscience
publication_status: published
publisher: Society for Neuroscience
publist_id: '8048'
quality_controlled: '1'
scopus_import: '1'
status: public
title: The Repo homeodomain transcription factor suppresses hematopoiesis in Drosophila
  and preserves the glial fate
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 39
year: '2019'
...
---
_id: '80'
abstract:
- lang: eng
  text: 'We consider an interacting, dilute Bose gas trapped in a harmonic potential
    at a positive temperature. The system is analyzed in a combination of a thermodynamic
    and a Gross–Pitaevskii (GP) limit where the trap frequency ω, the temperature
    T, and the particle number N are related by N∼ (T/ ω) 3→ ∞ while the scattering
    length is so small that the interaction energy per particle around the center
    of the trap is of the same order of magnitude as the spectral gap in the trap.
    We prove that the difference between the canonical free energy of the interacting
    gas and the one of the noninteracting system can be obtained by minimizing the
    GP energy functional. We also prove Bose–Einstein condensation in the following
    sense: The one-particle density matrix of any approximate minimizer of the canonical
    free energy functional is to leading order given by that of the noninteracting
    gas but with the free condensate wavefunction replaced by the GP minimizer.'
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Andreas
  full_name: Deuchert, Andreas
  id: 4DA65CD0-F248-11E8-B48F-1D18A9856A87
  last_name: Deuchert
  orcid: 0000-0003-3146-6746
- first_name: Robert
  full_name: Seiringer, Robert
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
- first_name: Jakob
  full_name: Yngvason, Jakob
  last_name: Yngvason
citation:
  ama: Deuchert A, Seiringer R, Yngvason J. Bose–Einstein condensation in a dilute,
    trapped gas at positive temperature. <i>Communications in Mathematical Physics</i>.
    2019;368(2):723-776. doi:<a href="https://doi.org/10.1007/s00220-018-3239-0">10.1007/s00220-018-3239-0</a>
  apa: Deuchert, A., Seiringer, R., &#38; Yngvason, J. (2019). Bose–Einstein condensation
    in a dilute, trapped gas at positive temperature. <i>Communications in Mathematical
    Physics</i>. Springer. <a href="https://doi.org/10.1007/s00220-018-3239-0">https://doi.org/10.1007/s00220-018-3239-0</a>
  chicago: Deuchert, Andreas, Robert Seiringer, and Jakob Yngvason. “Bose–Einstein
    Condensation in a Dilute, Trapped Gas at Positive Temperature.” <i>Communications
    in Mathematical Physics</i>. Springer, 2019. <a href="https://doi.org/10.1007/s00220-018-3239-0">https://doi.org/10.1007/s00220-018-3239-0</a>.
  ieee: A. Deuchert, R. Seiringer, and J. Yngvason, “Bose–Einstein condensation in
    a dilute, trapped gas at positive temperature,” <i>Communications in Mathematical
    Physics</i>, vol. 368, no. 2. Springer, pp. 723–776, 2019.
  ista: Deuchert A, Seiringer R, Yngvason J. 2019. Bose–Einstein condensation in a
    dilute, trapped gas at positive temperature. Communications in Mathematical Physics.
    368(2), 723–776.
  mla: Deuchert, Andreas, et al. “Bose–Einstein Condensation in a Dilute, Trapped
    Gas at Positive Temperature.” <i>Communications in Mathematical Physics</i>, vol.
    368, no. 2, Springer, 2019, pp. 723–76, doi:<a href="https://doi.org/10.1007/s00220-018-3239-0">10.1007/s00220-018-3239-0</a>.
  short: A. Deuchert, R. Seiringer, J. Yngvason, Communications in Mathematical Physics
    368 (2019) 723–776.
date_created: 2018-12-11T11:44:31Z
date_published: 2019-06-01T00:00:00Z
date_updated: 2023-08-24T14:27:51Z
day: '01'
ddc:
- '530'
department:
- _id: RoSe
doi: 10.1007/s00220-018-3239-0
ec_funded: 1
external_id:
  isi:
  - '000467796800007'
file:
- access_level: open_access
  checksum: c7e9880b43ac726712c1365e9f2f73a6
  content_type: application/pdf
  creator: dernst
  date_created: 2018-12-17T10:34:06Z
  date_updated: 2020-07-14T12:48:07Z
  file_id: '5688'
  file_name: 2018_CommunMathPhys_Deuchert.pdf
  file_size: 893902
  relation: main_file
file_date_updated: 2020-07-14T12:48:07Z
has_accepted_license: '1'
intvolume: '       368'
isi: 1
issue: '2'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
page: 723-776
project:
- _id: 25C6DC12-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '694227'
  name: Analysis of quantum many-body systems
- _id: 25C878CE-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P27533_N27
  name: Structure of the Excitation Spectrum for Many-Body Quantum Systems
publication: Communications in Mathematical Physics
publication_status: published
publisher: Springer
publist_id: '7974'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Bose–Einstein condensation in a dilute, trapped gas at positive temperature
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 368
year: '2019'
...
---
_id: '8175'
abstract:
- lang: eng
  text: We study edge asymptotics of poissonized Plancherel-type measures on skew
    Young diagrams (integer partitions). These measures can be seen as generalizations
    of those studied by Baik--Deift--Johansson and Baik--Rains in resolving Ulam's
    problem on longest increasing subsequences of random permutations and the last
    passage percolation (corner growth) discrete versions thereof. Moreover they interpolate
    between said measures and the uniform measure on partitions. In the new KPZ-like
    1/3 exponent edge scaling limit with logarithmic corrections, we find new probability
    distributions generalizing the classical Tracy--Widom GUE, GOE and GSE distributions
    from the theory of random matrices.
acknowledgement: "D.B. is especially grateful to Patrik Ferrari for suggesting simplifications
  in Section 3 and\r\nto Alessandra Occelli for suggesting the name for the models
  of Section 2.\r\n"
article_number: '34'
article_processing_charge: No
arxiv: 1
author:
- first_name: Dan
  full_name: Betea, Dan
  last_name: Betea
- first_name: Jérémie
  full_name: Bouttier, Jérémie
  last_name: Bouttier
- first_name: Peter
  full_name: Nejjar, Peter
  id: 4BF426E2-F248-11E8-B48F-1D18A9856A87
  last_name: Nejjar
- first_name: Mirjana
  full_name: Vuletíc, Mirjana
  last_name: Vuletíc
citation:
  ama: 'Betea D, Bouttier J, Nejjar P, Vuletíc M. New edge asymptotics of skew Young
    diagrams via free boundaries. In: <i>Proceedings on the 31st International Conference
    on Formal Power Series and Algebraic Combinatorics</i>. Formal Power Series and
    Algebraic Combinatorics; 2019.'
  apa: 'Betea, D., Bouttier, J., Nejjar, P., &#38; Vuletíc, M. (2019). New edge asymptotics
    of skew Young diagrams via free boundaries. In <i>Proceedings on the 31st International
    Conference on Formal Power Series and Algebraic Combinatorics</i>. Ljubljana,
    Slovenia: Formal Power Series and Algebraic Combinatorics.'
  chicago: Betea, Dan, Jérémie Bouttier, Peter Nejjar, and Mirjana Vuletíc. “New Edge
    Asymptotics of Skew Young Diagrams via Free Boundaries.” In <i>Proceedings on
    the 31st International Conference on Formal Power Series and Algebraic Combinatorics</i>.
    Formal Power Series and Algebraic Combinatorics, 2019.
  ieee: D. Betea, J. Bouttier, P. Nejjar, and M. Vuletíc, “New edge asymptotics of
    skew Young diagrams via free boundaries,” in <i>Proceedings on the 31st International
    Conference on Formal Power Series and Algebraic Combinatorics</i>, Ljubljana,
    Slovenia, 2019.
  ista: 'Betea D, Bouttier J, Nejjar P, Vuletíc M. 2019. New edge asymptotics of skew
    Young diagrams via free boundaries. Proceedings on the 31st International Conference
    on Formal Power Series and Algebraic Combinatorics. FPSAC: International Conference
    on Formal Power Series and Algebraic Combinatorics, 34.'
  mla: Betea, Dan, et al. “New Edge Asymptotics of Skew Young Diagrams via Free Boundaries.”
    <i>Proceedings on the 31st International Conference on Formal Power Series and
    Algebraic Combinatorics</i>, 34, Formal Power Series and Algebraic Combinatorics,
    2019.
  short: D. Betea, J. Bouttier, P. Nejjar, M. Vuletíc, in:, Proceedings on the 31st
    International Conference on Formal Power Series and Algebraic Combinatorics, Formal
    Power Series and Algebraic Combinatorics, 2019.
conference:
  end_date: 2019-07-05
  location: Ljubljana, Slovenia
  name: 'FPSAC: International Conference on Formal Power Series and Algebraic Combinatorics'
  start_date: 2019-07-01
date_created: 2020-07-26T22:01:04Z
date_published: 2019-07-01T00:00:00Z
date_updated: 2021-01-12T08:17:18Z
day: '01'
department:
- _id: LaEr
ec_funded: 1
external_id:
  arxiv:
  - '1902.08750'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1902.08750
month: '07'
oa: 1
oa_version: Preprint
project:
- _id: 258DCDE6-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '338804'
  name: Random matrices, universality and disordered quantum systems
- _id: 256E75B8-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '716117'
  name: Optimal Transport and Stochastic Dynamics
publication: Proceedings on the 31st International Conference on Formal Power Series
  and Algebraic Combinatorics
publication_status: published
publisher: Formal Power Series and Algebraic Combinatorics
quality_controlled: '1'
scopus_import: '1'
status: public
title: New edge asymptotics of skew Young diagrams via free boundaries
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2019'
...
---
_id: '8182'
abstract:
- lang: eng
  text: "Suppose that $n\\neq p^k$ and $n\\neq 2p^k$ for all $k$ and all primes $p$.
    We prove that for any Hausdorff compactum $X$ with a free action of the symmetric
    group $\\mathfrak S_n$ there exists an $\\mathfrak S_n$-equivariant map $X \\to\r\n{\\mathbb
    R}^n$ whose image avoids the diagonal $\\{(x,x\\dots,x)\\in {\\mathbb R}^n|x\\in
    {\\mathbb R}\\}$.\r\n  Previously, the special cases of this statement for certain
    $X$ were usually proved using the equivartiant obstruction theory. Such calculations
    are difficult and may become infeasible past the first (primary) obstruction.
    We\r\ntake a different approach which allows us to prove the vanishing of all
    obstructions simultaneously. The essential step in the proof is classifying the
    possible degrees of $\\mathfrak S_n$-equivariant maps from the boundary\r\n$\\partial\\Delta^{n-1}$
    of $(n-1)$-simplex to itself.  Existence of equivariant maps between spaces is
    important for many questions arising from discrete mathematics and geometry, such
    as Kneser's conjecture, the Square Peg conjecture, the Splitting Necklace problem,
    and the Topological Tverberg conjecture, etc. We demonstrate the utility of our
    result  applying it to one such question, a specific instance of envy-free division
    problem."
article_number: '1910.12628'
article_processing_charge: No
arxiv: 1
author:
- first_name: Sergey
  full_name: Avvakumov, Sergey
  id: 3827DAC8-F248-11E8-B48F-1D18A9856A87
  last_name: Avvakumov
- first_name: Sergey
  full_name: Kudrya, Sergey
  id: ecf01965-d252-11ea-95a5-8ada5f6c6a67
  last_name: Kudrya
citation:
  ama: Avvakumov S, Kudrya S. Vanishing of all equivariant obstructions and the mapping
    degree. <i>arXiv</i>.
  apa: Avvakumov, S., &#38; Kudrya, S. (n.d.). Vanishing of all equivariant obstructions
    and the mapping degree. <i>arXiv</i>. arXiv.
  chicago: Avvakumov, Sergey, and Sergey Kudrya. “Vanishing of All Equivariant Obstructions
    and the Mapping Degree.” <i>ArXiv</i>. arXiv, n.d.
  ieee: S. Avvakumov and S. Kudrya, “Vanishing of all equivariant obstructions and
    the mapping degree,” <i>arXiv</i>. arXiv.
  ista: Avvakumov S, Kudrya S. Vanishing of all equivariant obstructions and the mapping
    degree. arXiv, 1910.12628.
  mla: Avvakumov, Sergey, and Sergey Kudrya. “Vanishing of All Equivariant Obstructions
    and the Mapping Degree.” <i>ArXiv</i>, 1910.12628, arXiv.
  short: S. Avvakumov, S. Kudrya, ArXiv (n.d.).
date_created: 2020-07-30T10:45:08Z
date_published: 2019-10-28T00:00:00Z
date_updated: 2023-09-07T13:12:17Z
day: '28'
department:
- _id: UlWa
external_id:
  arxiv:
  - '1910.12628'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1910.12628
month: '10'
oa: 1
oa_version: Preprint
project:
- _id: 26611F5C-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P31312
  name: Algorithms for Embeddings and Homotopy Theory
publication: arXiv
publication_status: submitted
publisher: arXiv
related_material:
  record:
  - id: '11446'
    relation: later_version
    status: public
  - id: '8156'
    relation: dissertation_contains
    status: public
status: public
title: Vanishing of all equivariant obstructions and the mapping degree
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2019'
...
---
_id: '8184'
abstract:
- lang: eng
  text: "Denote by ∆N the N-dimensional simplex. A map f : ∆N → Rd is an almost r-embedding
    if fσ1∩. . .∩fσr = ∅ whenever σ1, . . . , σr are pairwise disjoint faces. A counterexample
    to the topological Tverberg conjecture asserts that if r is not a prime power
    and d ≥ 2r + 1, then there is an almost r-embedding ∆(d+1)(r−1) → Rd. This was
    improved by Blagojevi´c–Frick–Ziegler using a simple construction of higher-dimensional
    counterexamples by taking k-fold join power of lower-dimensional ones. We improve
    this further (for d large compared to r): If r is not a prime power and N := (d+
    1)r−r l\r\nd + 2 r + 1 m−2, then there is an almost r-embedding ∆N → Rd. For the
    r-fold van Kampen–Flores conjecture we also produce counterexamples which are
    stronger than previously known. Our proof is based on generalizations of the Mabillard–Wagner
    theorem on construction of almost r-embeddings from equivariant maps, and of the
    Ozaydin theorem on existence of equivariant maps. "
acknowledgement: We would like to thank F. Frick for helpful discussions
article_number: '1908.08731'
article_processing_charge: No
arxiv: 1
author:
- first_name: Sergey
  full_name: Avvakumov, Sergey
  id: 3827DAC8-F248-11E8-B48F-1D18A9856A87
  last_name: Avvakumov
- first_name: R.
  full_name: Karasev, R.
  last_name: Karasev
- first_name: A.
  full_name: Skopenkov, A.
  last_name: Skopenkov
citation:
  ama: Avvakumov S, Karasev R, Skopenkov A. Stronger counterexamples to the topological
    Tverberg conjecture. <i>arXiv</i>.
  apa: Avvakumov, S., Karasev, R., &#38; Skopenkov, A. (n.d.). Stronger counterexamples
    to the topological Tverberg conjecture. <i>arXiv</i>. arXiv.
  chicago: Avvakumov, Sergey, R. Karasev, and A. Skopenkov. “Stronger Counterexamples
    to the Topological Tverberg Conjecture.” <i>ArXiv</i>. arXiv, n.d.
  ieee: S. Avvakumov, R. Karasev, and A. Skopenkov, “Stronger counterexamples to the
    topological Tverberg conjecture,” <i>arXiv</i>. arXiv.
  ista: Avvakumov S, Karasev R, Skopenkov A. Stronger counterexamples to the topological
    Tverberg conjecture. arXiv, 1908.08731.
  mla: Avvakumov, Sergey, et al. “Stronger Counterexamples to the Topological Tverberg
    Conjecture.” <i>ArXiv</i>, 1908.08731, arXiv.
  short: S. Avvakumov, R. Karasev, A. Skopenkov, ArXiv (n.d.).
date_created: 2020-07-30T10:45:34Z
date_published: 2019-08-23T00:00:00Z
date_updated: 2023-09-08T11:20:02Z
day: '23'
department:
- _id: UlWa
external_id:
  arxiv:
  - '1908.08731'
  isi:
  - '000986519600004'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1908.08731
month: '08'
oa: 1
oa_version: Preprint
project:
- _id: 26611F5C-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P31312
  name: Algorithms for Embeddings and Homotopy Theory
publication: arXiv
publication_status: submitted
publisher: arXiv
related_material:
  record:
  - id: '8156'
    relation: dissertation_contains
    status: public
status: public
title: Stronger counterexamples to the topological Tverberg conjecture
type: preprint
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
year: '2019'
...
