---
_id: '9037'
abstract:
- lang: eng
  text: "We continue our study of ‘no‐dimension’ analogues of basic theorems in combinatorial
    and convex geometry in Banach spaces. We generalize some results of the paper
    (Adiprasito, Bárány and Mustafa, ‘Theorems of Carathéodory, Helly, and Tverberg
    without dimension’, Proceedings of the Thirtieth Annual ACM‐SIAM Symposium on
    Discrete Algorithms (Society for Industrial and Applied Mathematics, San Diego,
    California, 2019) 2350–2360) and prove no‐dimension versions of the colored Tverberg
    theorem, the selection lemma and the weak  \U0001D700 ‐net theorem in Banach spaces
    of type  \U0001D45D>1 . To prove these results, we use the original ideas of Adiprasito,
    Bárány and Mustafa for the Euclidean case, our no‐dimension version of the Radon
    theorem and slightly modified version of the celebrated Maurey lemma."
acknowledgement: "I wish to thank Imre Bárány for bringing the problem to my attention.
  I am grateful to Marton Naszódi and Igor Tsiutsiurupa for useful remarks and help
  with the text.\r\nThe author acknowledges the financial support from the Ministry
  of Educational and Science of the Russian Federation in the framework of MegaGrant
  no 075‐15‐2019‐1926."
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Grigory
  full_name: Ivanov, Grigory
  id: 87744F66-5C6F-11EA-AFE0-D16B3DDC885E
  last_name: Ivanov
citation:
  ama: Ivanov G. No-dimension Tverberg’s theorem and its corollaries in Banach spaces
    of type p. <i>Bulletin of the London Mathematical Society</i>. 2021;53(2):631-641.
    doi:<a href="https://doi.org/10.1112/blms.12449">10.1112/blms.12449</a>
  apa: Ivanov, G. (2021). No-dimension Tverberg’s theorem and its corollaries in Banach
    spaces of type p. <i>Bulletin of the London Mathematical Society</i>. London Mathematical
    Society. <a href="https://doi.org/10.1112/blms.12449">https://doi.org/10.1112/blms.12449</a>
  chicago: Ivanov, Grigory. “No-Dimension Tverberg’s Theorem and Its Corollaries in
    Banach Spaces of Type P.” <i>Bulletin of the London Mathematical Society</i>.
    London Mathematical Society, 2021. <a href="https://doi.org/10.1112/blms.12449">https://doi.org/10.1112/blms.12449</a>.
  ieee: G. Ivanov, “No-dimension Tverberg’s theorem and its corollaries in Banach
    spaces of type p,” <i>Bulletin of the London Mathematical Society</i>, vol. 53,
    no. 2. London Mathematical Society, pp. 631–641, 2021.
  ista: Ivanov G. 2021. No-dimension Tverberg’s theorem and its corollaries in Banach
    spaces of type p. Bulletin of the London Mathematical Society. 53(2), 631–641.
  mla: Ivanov, Grigory. “No-Dimension Tverberg’s Theorem and Its Corollaries in Banach
    Spaces of Type P.” <i>Bulletin of the London Mathematical Society</i>, vol. 53,
    no. 2, London Mathematical Society, 2021, pp. 631–41, doi:<a href="https://doi.org/10.1112/blms.12449">10.1112/blms.12449</a>.
  short: G. Ivanov, Bulletin of the London Mathematical Society 53 (2021) 631–641.
date_created: 2021-01-24T23:01:08Z
date_published: 2021-04-01T00:00:00Z
date_updated: 2023-08-07T13:35:20Z
day: '01'
ddc:
- '510'
department:
- _id: UlWa
doi: 10.1112/blms.12449
external_id:
  arxiv:
  - '1912.08561'
  isi:
  - '000607265100001'
file:
- access_level: open_access
  checksum: e6ceaa6470d835eb4c211cbdd38fdfd1
  content_type: application/pdf
  creator: kschuh
  date_created: 2021-08-06T09:59:45Z
  date_updated: 2021-08-06T09:59:45Z
  file_id: '9796'
  file_name: 2021_BLMS_Ivanov.pdf
  file_size: 194550
  relation: main_file
  success: 1
file_date_updated: 2021-08-06T09:59:45Z
has_accepted_license: '1'
intvolume: '        53'
isi: 1
issue: '2'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
page: 631-641
publication: Bulletin of the London Mathematical Society
publication_identifier:
  eissn:
  - '14692120'
  issn:
  - '00246093'
publication_status: published
publisher: London Mathematical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: No-dimension Tverberg's theorem and its corollaries in Banach spaces of type
  p
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 53
year: '2021'
...
---
_id: '9038'
abstract:
- lang: eng
  text: 'Layered materials in which individual atomic layers are bonded by weak van
    der Waals forces (vdW materials) constitute one of the most prominent platforms
    for materials research. Particularly, polar vdW crystals, such as hexagonal boron
    nitride (h-BN), alpha-molybdenum trioxide (α-MoO3) or alpha-vanadium pentoxide
    (α-V2O5), have received significant attention in nano-optics, since they support
    phonon polaritons (PhPs)―light coupled to lattice vibrations― with strong electromagnetic
    confinement and low optical losses. Recently, correlative far- and near-field
    studies of α-MoO3 have been demonstrated as an effective strategy to accurately
    extract the permittivity of this material. Here, we use this accurately characterized
    and low-loss polaritonic material to sense its local dielectric environment, namely
    silica (SiO2), one of the most widespread substrates in nanotechnology. By studying
    the propagation of PhPs on α-MoO3 flakes with different thicknesses laying on
    SiO2 substrates via near-field microscopy (s-SNOM), we extract locally the infrared
    permittivity of SiO2. Our work reveals PhPs nanoimaging as a versatile method
    for the quantitative characterization of the local optical properties of dielectric
    substrates, crucial for understanding and predicting the response of nanomaterials
    and for the future scalability of integrated nanophotonic devices. '
acknowledgement: "P.A.-M. acknowledges financial support through JAE Intro program
  from the Superior\r\nCouncil of Scientific Investigations and the Spanish Ministry
  of Science and Innovation (grant number JAEINT_20_00589). G.Á.-P. and J.T.-G. acknowledge
  financial support through the Severo Ochoa Program from the Government of the Principality
  of Asturias (grant numbers PA-20-PF-BP19-053 and PA-18-PF-BP17-126, respectively).
  J.M.-S. acknowledges financial support from the Ramón y Cajal Program of the Government
  of Spain (RYC2018-026196-I) and the Spanish Ministry of Science and Innovation (State
  Plan for Scientific and Technical Research and Innovation grant number PID2019-110308GA-I00).
  P.A.-G. acknowledges support from the European Research Council under starting grant
  no. 715496, 2DNANOPTICA and the Spanish Ministry of Science and Innovation (State
  Plan for Scientific and Technical Research and Innovation grant number PID2019-111156GB-I00)."
article_number: '120'
article_processing_charge: No
article_type: original
author:
- first_name: Patricia
  full_name: Aguilar-Merino, Patricia
  last_name: Aguilar-Merino
- first_name: Gonzalo
  full_name: Álvarez-Pérez, Gonzalo
  last_name: Álvarez-Pérez
- first_name: Javier
  full_name: Taboada-Gutiérrez, Javier
  last_name: Taboada-Gutiérrez
- first_name: Jiahua
  full_name: Duan, Jiahua
  last_name: Duan
- first_name: Ivan
  full_name: Prieto Gonzalez, Ivan
  id: 2A307FE2-F248-11E8-B48F-1D18A9856A87
  last_name: Prieto Gonzalez
  orcid: 0000-0002-7370-5357
- first_name: Luis Manuel
  full_name: Álvarez-Prado, Luis Manuel
  last_name: Álvarez-Prado
- first_name: Alexey Y.
  full_name: Nikitin, Alexey Y.
  last_name: Nikitin
- first_name: Javier
  full_name: Martín-Sánchez, Javier
  last_name: Martín-Sánchez
- first_name: Pablo
  full_name: Alonso-González, Pablo
  last_name: Alonso-González
citation:
  ama: Aguilar-Merino P, Álvarez-Pérez G, Taboada-Gutiérrez J, et al. Extracting the
    infrared permittivity of SiO2 substrates locally by near-field imaging of phonon
    polaritons in a van der Waals crystal. <i>Nanomaterials</i>. 2021;11(1). doi:<a
    href="https://doi.org/10.3390/nano11010120">10.3390/nano11010120</a>
  apa: Aguilar-Merino, P., Álvarez-Pérez, G., Taboada-Gutiérrez, J., Duan, J., Prieto
    Gonzalez, I., Álvarez-Prado, L. M., … Alonso-González, P. (2021). Extracting the
    infrared permittivity of SiO2 substrates locally by near-field imaging of phonon
    polaritons in a van der Waals crystal. <i>Nanomaterials</i>. MDPI. <a href="https://doi.org/10.3390/nano11010120">https://doi.org/10.3390/nano11010120</a>
  chicago: Aguilar-Merino, Patricia, Gonzalo Álvarez-Pérez, Javier Taboada-Gutiérrez,
    Jiahua Duan, Ivan Prieto Gonzalez, Luis Manuel Álvarez-Prado, Alexey Y. Nikitin,
    Javier Martín-Sánchez, and Pablo Alonso-González. “Extracting the Infrared Permittivity
    of SiO2 Substrates Locally by Near-Field Imaging of Phonon Polaritons in a van
    Der Waals Crystal.” <i>Nanomaterials</i>. MDPI, 2021. <a href="https://doi.org/10.3390/nano11010120">https://doi.org/10.3390/nano11010120</a>.
  ieee: P. Aguilar-Merino <i>et al.</i>, “Extracting the infrared permittivity of
    SiO2 substrates locally by near-field imaging of phonon polaritons in a van der
    Waals crystal,” <i>Nanomaterials</i>, vol. 11, no. 1. MDPI, 2021.
  ista: Aguilar-Merino P, Álvarez-Pérez G, Taboada-Gutiérrez J, Duan J, Prieto Gonzalez
    I, Álvarez-Prado LM, Nikitin AY, Martín-Sánchez J, Alonso-González P. 2021. Extracting
    the infrared permittivity of SiO2 substrates locally by near-field imaging of
    phonon polaritons in a van der Waals crystal. Nanomaterials. 11(1), 120.
  mla: Aguilar-Merino, Patricia, et al. “Extracting the Infrared Permittivity of SiO2
    Substrates Locally by Near-Field Imaging of Phonon Polaritons in a van Der Waals
    Crystal.” <i>Nanomaterials</i>, vol. 11, no. 1, 120, MDPI, 2021, doi:<a href="https://doi.org/10.3390/nano11010120">10.3390/nano11010120</a>.
  short: P. Aguilar-Merino, G. Álvarez-Pérez, J. Taboada-Gutiérrez, J. Duan, I. Prieto
    Gonzalez, L.M. Álvarez-Prado, A.Y. Nikitin, J. Martín-Sánchez, P. Alonso-González,
    Nanomaterials 11 (2021).
date_created: 2021-01-24T23:01:09Z
date_published: 2021-01-07T00:00:00Z
date_updated: 2023-08-07T13:35:50Z
day: '07'
ddc:
- '620'
department:
- _id: NanoFab
doi: 10.3390/nano11010120
external_id:
  isi:
  - '000610636600001'
  pmid:
  - '33430225'
file:
- access_level: open_access
  checksum: 1edc13eeda83df5cd9fff9504727b1f5
  content_type: application/pdf
  creator: dernst
  date_created: 2021-01-25T08:02:32Z
  date_updated: 2021-01-25T08:02:32Z
  file_id: '9042'
  file_name: 2020_Nanomaterials_Aguilar_Merino.pdf
  file_size: 2730267
  relation: main_file
  success: 1
file_date_updated: 2021-01-25T08:02:32Z
has_accepted_license: '1'
intvolume: '        11'
isi: 1
issue: '1'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
pmid: 1
publication: Nanomaterials
publication_identifier:
  eissn:
  - '20794991'
publication_status: published
publisher: MDPI
quality_controlled: '1'
scopus_import: '1'
status: public
title: Extracting the infrared permittivity of SiO2 substrates locally by near-field
  imaging of phonon polaritons in a van der Waals crystal
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 11
year: '2021'
...
---
_id: '9046'
acknowledgement: Our work was supported by the Swedish Research Council (grant 2017-01527)
  to DIA
article_number: e1009172
article_processing_charge: No
article_type: original
author:
- first_name: Roderich
  full_name: Römhild, Roderich
  id: 68E56E44-62B0-11EA-B963-444F3DDC885E
  last_name: Römhild
  orcid: 0000-0001-9480-5261
- first_name: Dan I.
  full_name: Andersson, Dan I.
  last_name: Andersson
citation:
  ama: Römhild R, Andersson DI. Mechanisms and therapeutic potential of collateral
    sensitivity to antibiotics. <i>PLoS Pathogens</i>. 2021;17(1). doi:<a href="https://doi.org/10.1371/journal.ppat.1009172">10.1371/journal.ppat.1009172</a>
  apa: Römhild, R., &#38; Andersson, D. I. (2021). Mechanisms and therapeutic potential
    of collateral sensitivity to antibiotics. <i>PLoS Pathogens</i>. Public Library
    of Science. <a href="https://doi.org/10.1371/journal.ppat.1009172">https://doi.org/10.1371/journal.ppat.1009172</a>
  chicago: Römhild, Roderich, and Dan I. Andersson. “Mechanisms and Therapeutic Potential
    of Collateral Sensitivity to Antibiotics.” <i>PLoS Pathogens</i>. Public Library
    of Science, 2021. <a href="https://doi.org/10.1371/journal.ppat.1009172">https://doi.org/10.1371/journal.ppat.1009172</a>.
  ieee: R. Römhild and D. I. Andersson, “Mechanisms and therapeutic potential of collateral
    sensitivity to antibiotics,” <i>PLoS Pathogens</i>, vol. 17, no. 1. Public Library
    of Science, 2021.
  ista: Römhild R, Andersson DI. 2021. Mechanisms and therapeutic potential of collateral
    sensitivity to antibiotics. PLoS Pathogens. 17(1), e1009172.
  mla: Römhild, Roderich, and Dan I. Andersson. “Mechanisms and Therapeutic Potential
    of Collateral Sensitivity to Antibiotics.” <i>PLoS Pathogens</i>, vol. 17, no.
    1, e1009172, Public Library of Science, 2021, doi:<a href="https://doi.org/10.1371/journal.ppat.1009172">10.1371/journal.ppat.1009172</a>.
  short: R. Römhild, D.I. Andersson, PLoS Pathogens 17 (2021).
date_created: 2021-01-31T23:01:21Z
date_published: 2021-01-14T00:00:00Z
date_updated: 2023-08-07T13:36:55Z
day: '14'
ddc:
- '570'
department:
- _id: CaGu
doi: 10.1371/journal.ppat.1009172
external_id:
  isi:
  - '000610190400007'
  pmid:
  - '33444399'
file:
- access_level: open_access
  checksum: d745d7f8fcbb9b95fea16a36f94dee31
  content_type: application/pdf
  creator: dernst
  date_created: 2021-02-03T12:13:03Z
  date_updated: 2021-02-03T12:13:03Z
  file_id: '9070'
  file_name: 2021_PlosPathogens_Roemhild.pdf
  file_size: 570066
  relation: main_file
  success: 1
file_date_updated: 2021-02-03T12:13:03Z
has_accepted_license: '1'
intvolume: '        17'
isi: 1
issue: '1'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
pmid: 1
publication: PLoS Pathogens
publication_identifier:
  eissn:
  - '15537374'
  issn:
  - '15537366'
publication_status: published
publisher: Public Library of Science
quality_controlled: '1'
scopus_import: '1'
status: public
title: Mechanisms and therapeutic potential of collateral sensitivity to antibiotics
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 17
year: '2021'
...
---
_id: '9047'
abstract:
- lang: eng
  text: This work analyzes the latency of the simplified successive cancellation (SSC)
    decoding scheme for polar codes proposed by Alamdar-Yazdi and Kschischang. It
    is shown that, unlike conventional successive cancellation decoding, where latency
    is linear in the block length, the latency of SSC decoding is sublinear. More
    specifically, the latency of SSC decoding is O(N1−1/μ) , where N is the block
    length and μ is the scaling exponent of the channel, which captures the speed
    of convergence of the rate to capacity. Numerical results demonstrate the tightness
    of the bound and show that most of the latency reduction arises from the parallel
    decoding of subcodes of rate 0 or 1.
acknowledgement: M. Mondelli was partially supported by grants NSF DMS-1613091, CCF-1714305,
  IIS-1741162, and ONR N00014-18-1-2729. S. A. Hashemi is supported by a Postdoctoral
  Fellowship from the Natural Sciences and Engineering Research Council of Canada
  (NSERC) and by Huawei. The authors would like to thank the anonymous reviewers for
  their comments that helped improving the quality of the manuscript.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Marco
  full_name: Mondelli, Marco
  id: 27EB676C-8706-11E9-9510-7717E6697425
  last_name: Mondelli
  orcid: 0000-0002-3242-7020
- first_name: Seyyed Ali
  full_name: Hashemi, Seyyed Ali
  last_name: Hashemi
- first_name: John M.
  full_name: Cioffi, John M.
  last_name: Cioffi
- first_name: Andrea
  full_name: Goldsmith, Andrea
  last_name: Goldsmith
citation:
  ama: Mondelli M, Hashemi SA, Cioffi JM, Goldsmith A. Sublinear latency for simplified
    successive cancellation decoding of polar codes. <i>IEEE Transactions on Wireless
    Communications</i>. 2021;20(1):18-27. doi:<a href="https://doi.org/10.1109/TWC.2020.3022922">10.1109/TWC.2020.3022922</a>
  apa: Mondelli, M., Hashemi, S. A., Cioffi, J. M., &#38; Goldsmith, A. (2021). Sublinear
    latency for simplified successive cancellation decoding of polar codes. <i>IEEE
    Transactions on Wireless Communications</i>. IEEE. <a href="https://doi.org/10.1109/TWC.2020.3022922">https://doi.org/10.1109/TWC.2020.3022922</a>
  chicago: Mondelli, Marco, Seyyed Ali Hashemi, John M. Cioffi, and Andrea Goldsmith.
    “Sublinear Latency for Simplified Successive Cancellation Decoding of Polar Codes.”
    <i>IEEE Transactions on Wireless Communications</i>. IEEE, 2021. <a href="https://doi.org/10.1109/TWC.2020.3022922">https://doi.org/10.1109/TWC.2020.3022922</a>.
  ieee: M. Mondelli, S. A. Hashemi, J. M. Cioffi, and A. Goldsmith, “Sublinear latency
    for simplified successive cancellation decoding of polar codes,” <i>IEEE Transactions
    on Wireless Communications</i>, vol. 20, no. 1. IEEE, pp. 18–27, 2021.
  ista: Mondelli M, Hashemi SA, Cioffi JM, Goldsmith A. 2021. Sublinear latency for
    simplified successive cancellation decoding of polar codes. IEEE Transactions
    on Wireless Communications. 20(1), 18–27.
  mla: Mondelli, Marco, et al. “Sublinear Latency for Simplified Successive Cancellation
    Decoding of Polar Codes.” <i>IEEE Transactions on Wireless Communications</i>,
    vol. 20, no. 1, IEEE, 2021, pp. 18–27, doi:<a href="https://doi.org/10.1109/TWC.2020.3022922">10.1109/TWC.2020.3022922</a>.
  short: M. Mondelli, S.A. Hashemi, J.M. Cioffi, A. Goldsmith, IEEE Transactions on
    Wireless Communications 20 (2021) 18–27.
date_created: 2021-01-31T23:01:21Z
date_published: 2021-01-01T00:00:00Z
date_updated: 2023-08-07T13:36:25Z
day: '01'
department:
- _id: MaMo
doi: 10.1109/TWC.2020.3022922
external_id:
  arxiv:
  - '1909.04892'
  isi:
  - '000607808800002'
intvolume: '        20'
isi: 1
issue: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1909.04892
month: '01'
oa: 1
oa_version: Preprint
page: 18-27
publication: IEEE Transactions on Wireless Communications
publication_identifier:
  eissn:
  - '15582248'
  issn:
  - '15361276'
publication_status: published
publisher: IEEE
quality_controlled: '1'
related_material:
  record:
  - id: '8536'
    relation: earlier_version
    status: public
scopus_import: '1'
status: public
title: Sublinear latency for simplified successive cancellation decoding of polar
  codes
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 20
year: '2021'
...
---
_id: '9048'
abstract:
- lang: eng
  text: The analogy between an equilibrium partition function and the return probability
    in many-body unitary dynamics has led to the concept of dynamical quantum phase
    transition (DQPT). DQPTs are defined by nonanalyticities in the return amplitude
    and are present in many models. In some cases, DQPTs can be related to equilibrium
    concepts, such as order parameters, yet their universal description is an open
    question. In this Letter, we provide first steps toward a classification of DQPTs
    by using a matrix product state description of unitary dynamics in the thermodynamic
    limit. This allows us to distinguish the two limiting cases of “precession” and
    “entanglement” DQPTs, which are illustrated using an analytical description in
    the quantum Ising model. While precession DQPTs are characterized by a large entanglement
    gap and are semiclassical in their nature, entanglement DQPTs occur near avoided
    crossings in the entanglement spectrum and can be distinguished by a complex pattern
    of nonlocal correlations. We demonstrate the existence of precession and entanglement
    DQPTs beyond Ising models, discuss observables that can distinguish them, and
    relate their interplay to complex DQPT phenomenology.
acknowledgement: "S. D. N. acknowledges funding from the Institute of Science and
  Technology (IST) Austria and from the European Union’s Horizon 2020 Research and
  Innovation Programme under the Marie Skłodowska-Curie Grant Agreement No. 754411.
  A. M. and M. S. were supported by the European Research Council (ERC) under the
  European Union’s Horizon 2020 Research and\r\nInnovation Programme (Grant Agreement
  No. 850899)."
article_number: '040602'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Stefano
  full_name: De Nicola, Stefano
  id: 42832B76-F248-11E8-B48F-1D18A9856A87
  last_name: De Nicola
  orcid: 0000-0002-4842-6671
- first_name: Alexios
  full_name: Michailidis, Alexios
  id: 36EBAD38-F248-11E8-B48F-1D18A9856A87
  last_name: Michailidis
  orcid: 0000-0002-8443-1064
- first_name: Maksym
  full_name: Serbyn, Maksym
  id: 47809E7E-F248-11E8-B48F-1D18A9856A87
  last_name: Serbyn
  orcid: 0000-0002-2399-5827
citation:
  ama: De Nicola S, Michailidis A, Serbyn M. Entanglement view of dynamical quantum
    phase transitions. <i>Physical Review Letters</i>. 2021;126(4). doi:<a href="https://doi.org/10.1103/physrevlett.126.040602">10.1103/physrevlett.126.040602</a>
  apa: De Nicola, S., Michailidis, A., &#38; Serbyn, M. (2021). Entanglement view
    of dynamical quantum phase transitions. <i>Physical Review Letters</i>. American
    Physical Society. <a href="https://doi.org/10.1103/physrevlett.126.040602">https://doi.org/10.1103/physrevlett.126.040602</a>
  chicago: De Nicola, Stefano, Alexios Michailidis, and Maksym Serbyn. “Entanglement
    View of Dynamical Quantum Phase Transitions.” <i>Physical Review Letters</i>.
    American Physical Society, 2021. <a href="https://doi.org/10.1103/physrevlett.126.040602">https://doi.org/10.1103/physrevlett.126.040602</a>.
  ieee: S. De Nicola, A. Michailidis, and M. Serbyn, “Entanglement view of dynamical
    quantum phase transitions,” <i>Physical Review Letters</i>, vol. 126, no. 4. American
    Physical Society, 2021.
  ista: De Nicola S, Michailidis A, Serbyn M. 2021. Entanglement view of dynamical
    quantum phase transitions. Physical Review Letters. 126(4), 040602.
  mla: De Nicola, Stefano, et al. “Entanglement View of Dynamical Quantum Phase Transitions.”
    <i>Physical Review Letters</i>, vol. 126, no. 4, 040602, American Physical Society,
    2021, doi:<a href="https://doi.org/10.1103/physrevlett.126.040602">10.1103/physrevlett.126.040602</a>.
  short: S. De Nicola, A. Michailidis, M. Serbyn, Physical Review Letters 126 (2021).
date_created: 2021-02-01T09:20:00Z
date_published: 2021-01-29T00:00:00Z
date_updated: 2023-09-05T12:08:58Z
day: '29'
ddc:
- '530'
department:
- _id: MaSe
doi: 10.1103/physrevlett.126.040602
ec_funded: 1
external_id:
  arxiv:
  - '2008.04894'
  isi:
  - '000613148200001'
file:
- access_level: open_access
  checksum: d9acbc502390ed7a97e631d23ae19ecd
  content_type: application/pdf
  creator: dernst
  date_created: 2021-02-03T12:47:04Z
  date_updated: 2021-02-03T12:47:04Z
  file_id: '9074'
  file_name: 2021_PhysicalRevLett_DeNicola.pdf
  file_size: 398075
  relation: main_file
  success: 1
file_date_updated: 2021-02-03T12:47:04Z
has_accepted_license: '1'
intvolume: '       126'
isi: 1
issue: '4'
keyword:
- General Physics and Astronomy
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '754411'
  name: ISTplus - Postdoctoral Fellowships
- _id: 23841C26-32DE-11EA-91FC-C7463DDC885E
  call_identifier: H2020
  grant_number: '850899'
  name: 'Non-Ergodic Quantum Matter: Universality, Dynamics and Control'
publication: Physical Review Letters
publication_identifier:
  eissn:
  - 1079-7114
  issn:
  - 0031-9007
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
status: public
title: Entanglement view of dynamical quantum phase transitions
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 126
year: '2021'
...
---
_id: '9056'
abstract:
- lang: eng
  text: "In this thesis we study persistence of multi-covers of Euclidean balls and
    the geometric structures underlying their computation, in particular Delaunay
    mosaics and Voronoi tessellations. The k-fold cover for some discrete input point
    set consists of the space where at least k balls of radius r around the input
    points overlap. Persistence is a notion that captures, in some sense, the topology
    of the shape underlying the input. While persistence is usually computed for the
    union of balls, the k-fold cover is of interest as it captures local density,\r\nand
    thus might approximate the shape of the input better if the input data is noisy.
    To compute persistence of these k-fold covers, we need a discretization that is
    provided by higher-order Delaunay mosaics. We present and implement a simple and
    efficient algorithm for the computation of higher-order Delaunay mosaics, and
    use it to give experimental results for their combinatorial properties. The algorithm
    makes use of a new geometric structure, the rhomboid tiling. It contains the higher-order
    Delaunay mosaics as slices, and by introducing a filtration\r\nfunction on the
    tiling, we also obtain higher-order α-shapes as slices. These allow us to compute
    persistence of the multi-covers for varying radius r; the computation for varying
    k is less straight-foward and involves the rhomboid tiling directly. We apply
    our algorithms to experimental sphere packings to shed light on their structural
    properties. Finally, inspired by periodic structures in packings and materials,
    we propose and implement an algorithm for periodic Delaunay triangulations to
    be integrated into the Computational Geometry Algorithms Library (CGAL), and discuss
    the implications on persistence for periodic data sets."
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Georg F
  full_name: Osang, Georg F
  id: 464B40D6-F248-11E8-B48F-1D18A9856A87
  last_name: Osang
  orcid: 0000-0002-8882-5116
citation:
  ama: Osang GF. Multi-cover persistence and Delaunay mosaics. 2021. doi:<a href="https://doi.org/10.15479/AT:ISTA:9056">10.15479/AT:ISTA:9056</a>
  apa: Osang, G. F. (2021). <i>Multi-cover persistence and Delaunay mosaics</i>. Institute
    of Science and Technology Austria, Klosterneuburg. <a href="https://doi.org/10.15479/AT:ISTA:9056">https://doi.org/10.15479/AT:ISTA:9056</a>
  chicago: Osang, Georg F. “Multi-Cover Persistence and Delaunay Mosaics.” Institute
    of Science and Technology Austria, 2021. <a href="https://doi.org/10.15479/AT:ISTA:9056">https://doi.org/10.15479/AT:ISTA:9056</a>.
  ieee: G. F. Osang, “Multi-cover persistence and Delaunay mosaics,” Institute of
    Science and Technology Austria, Klosterneuburg, 2021.
  ista: 'Osang GF. 2021. Multi-cover persistence and Delaunay mosaics. Klosterneuburg:
    Institute of Science and Technology Austria.'
  mla: Osang, Georg F. <i>Multi-Cover Persistence and Delaunay Mosaics</i>. Institute
    of Science and Technology Austria, 2021, doi:<a href="https://doi.org/10.15479/AT:ISTA:9056">10.15479/AT:ISTA:9056</a>.
  short: G.F. Osang, Multi-Cover Persistence and Delaunay Mosaics, Institute of Science
    and Technology Austria, 2021.
date_created: 2021-02-02T14:11:06Z
date_published: 2021-02-01T00:00:00Z
date_updated: 2023-09-07T13:29:01Z
day: '01'
ddc:
- '006'
- '514'
- '516'
degree_awarded: PhD
department:
- _id: HeEd
- _id: GradSch
doi: 10.15479/AT:ISTA:9056
file:
- access_level: closed
  checksum: bcf27986147cab0533b6abadd74e7629
  content_type: application/zip
  creator: patrickd
  date_created: 2021-02-02T14:09:25Z
  date_updated: 2021-02-03T10:37:28Z
  file_id: '9063'
  file_name: thesis_source.zip
  file_size: 13446994
  relation: source_file
- access_level: open_access
  checksum: 9cc8af266579a464385bbe2aff6af606
  content_type: application/pdf
  creator: patrickd
  date_created: 2021-02-02T14:09:18Z
  date_updated: 2021-02-02T14:09:18Z
  file_id: '9064'
  file_name: thesis_pdfA2b.pdf
  file_size: 5210329
  relation: main_file
  success: 1
file_date_updated: 2021-02-03T10:37:28Z
has_accepted_license: '1'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
page: '134'
place: Klosterneuburg
publication_identifier:
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '187'
    relation: part_of_dissertation
    status: public
  - id: '8703'
    relation: part_of_dissertation
    status: public
status: public
supervisor:
- first_name: Herbert
  full_name: Edelsbrunner, Herbert
  id: 3FB178DA-F248-11E8-B48F-1D18A9856A87
  last_name: Edelsbrunner
  orcid: 0000-0002-9823-6833
title: Multi-cover persistence and Delaunay mosaics
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: dissertation
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
year: '2021'
...
---
_id: '9073'
abstract:
- lang: eng
  text: The sensory and cognitive abilities of the mammalian neocortex are underpinned
    by intricate columnar and laminar circuits formed from an array of diverse neuronal
    populations. One approach to determining how interactions between these circuit
    components give rise to complex behavior is to investigate the rules by which
    cortical circuits are formed and acquire functionality during development. This
    review summarizes recent research on the development of the neocortex, from genetic
    determination in neural stem cells through to the dynamic role that specific neuronal
    populations play in the earliest circuits of neocortex, and how they contribute
    to emergent function and cognition. While many of these endeavors take advantage
    of model systems, consideration will also be given to advances in our understanding
    of activity in nascent human circuits. Such cross-species perspective is imperative
    when investigating the mechanisms underlying the dysfunction of early neocortical
    circuits in neurodevelopmental disorders, so that one can identify targets amenable
    to therapeutic intervention.
acknowledgement: Work in the I.L.H.-O. laboratory was supported by European Research
  Council Grant ERC-2015-CoG 681577 and German Research Foundation Ha 4466/10-1, Ha4466/11-1,
  Ha4466/12-1, SPP 1665, and SFB 936B5. Work in the S.J.B.B. laboratory was supported
  by Biotechnology and Biological Sciences Research Council BB/P003796/1, Medical
  Research Council MR/K004387/1 and MR/T033320/1, Wellcome Trust 215199/Z/19/Z and
  102386/Z/13/Z, and John Fell Fund. Work in the S.H. laboratory was supported by
  European Research Council Grants ERC-2016-CoG 725780 LinPro and FWF SFB F78. This
  work was supported by National Institutes of Health Grant NIMH 1R01MH110553 to N.V.D.M.G.
  Work in the J.A.C. laboratory was supported by the Ludwig Family Foundation, Simons
  Foundation SFARI Research Award, and National Institutes of Health/National Institute
  of Mental Health R01 MH102365 and R01MH113852. The B.V. laboratory was supported
  by Whitehall Foundation 2017-12-73, National Science Foundation 1736028, National
  Institutes of Health, National Institute of General Medical Sciences R01GM134363-01,
  and Halıcıoğlu Data Science Institute Fellowship. This work was supported by the
  University of California San Diego School of Medicine.
article_processing_charge: No
article_type: original
author:
- first_name: Ileana L.
  full_name: Hanganu-Opatz, Ileana L.
  last_name: Hanganu-Opatz
- first_name: Simon J. B.
  full_name: Butt, Simon J. B.
  last_name: Butt
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
- first_name: Natalia V.
  full_name: De Marco García, Natalia V.
  last_name: De Marco García
- first_name: Jessica A.
  full_name: Cardin, Jessica A.
  last_name: Cardin
- first_name: Bradley
  full_name: Voytek, Bradley
  last_name: Voytek
- first_name: Alysson R.
  full_name: Muotri, Alysson R.
  last_name: Muotri
citation:
  ama: Hanganu-Opatz IL, Butt SJB, Hippenmeyer S, et al. The logic of developing neocortical
    circuits in health and disease. <i>The Journal of Neuroscience</i>. 2021;41(5):813-822.
    doi:<a href="https://doi.org/10.1523/jneurosci.1655-20.2020">10.1523/jneurosci.1655-20.2020</a>
  apa: Hanganu-Opatz, I. L., Butt, S. J. B., Hippenmeyer, S., De Marco García, N.
    V., Cardin, J. A., Voytek, B., &#38; Muotri, A. R. (2021). The logic of developing
    neocortical circuits in health and disease. <i>The Journal of Neuroscience</i>.
    Society for Neuroscience. <a href="https://doi.org/10.1523/jneurosci.1655-20.2020">https://doi.org/10.1523/jneurosci.1655-20.2020</a>
  chicago: Hanganu-Opatz, Ileana L., Simon J. B. Butt, Simon Hippenmeyer, Natalia
    V. De Marco García, Jessica A. Cardin, Bradley Voytek, and Alysson R. Muotri.
    “The Logic of Developing Neocortical Circuits in Health and Disease.” <i>The Journal
    of Neuroscience</i>. Society for Neuroscience, 2021. <a href="https://doi.org/10.1523/jneurosci.1655-20.2020">https://doi.org/10.1523/jneurosci.1655-20.2020</a>.
  ieee: I. L. Hanganu-Opatz <i>et al.</i>, “The logic of developing neocortical circuits
    in health and disease,” <i>The Journal of Neuroscience</i>, vol. 41, no. 5. Society
    for Neuroscience, pp. 813–822, 2021.
  ista: Hanganu-Opatz IL, Butt SJB, Hippenmeyer S, De Marco García NV, Cardin JA,
    Voytek B, Muotri AR. 2021. The logic of developing neocortical circuits in health
    and disease. The Journal of Neuroscience. 41(5), 813–822.
  mla: Hanganu-Opatz, Ileana L., et al. “The Logic of Developing Neocortical Circuits
    in Health and Disease.” <i>The Journal of Neuroscience</i>, vol. 41, no. 5, Society
    for Neuroscience, 2021, pp. 813–22, doi:<a href="https://doi.org/10.1523/jneurosci.1655-20.2020">10.1523/jneurosci.1655-20.2020</a>.
  short: I.L. Hanganu-Opatz, S.J.B. Butt, S. Hippenmeyer, N.V. De Marco García, J.A.
    Cardin, B. Voytek, A.R. Muotri, The Journal of Neuroscience 41 (2021) 813–822.
date_created: 2021-02-03T12:23:51Z
date_published: 2021-02-03T00:00:00Z
date_updated: 2023-09-05T14:03:17Z
day: '03'
ddc:
- '570'
department:
- _id: SiHi
doi: 10.1523/jneurosci.1655-20.2020
ec_funded: 1
external_id:
  isi:
  - '000616763400002'
  pmid:
  - '33431633'
file:
- access_level: open_access
  checksum: 578fd7ed1a0aef74bce61bea2d987b33
  content_type: application/pdf
  creator: dernst
  date_created: 2022-05-27T06:59:55Z
  date_updated: 2022-05-27T06:59:55Z
  file_id: '11414'
  file_name: 2021_JourNeuroscience_Hanganu.pdf
  file_size: 1031150
  relation: main_file
  success: 1
file_date_updated: 2022-05-27T06:59:55Z
has_accepted_license: '1'
intvolume: '        41'
isi: 1
issue: '5'
keyword:
- General Neuroscience
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
page: 813-822
pmid: 1
project:
- _id: 260018B0-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '725780'
  name: Principles of Neural Stem Cell Lineage Progression in Cerebral Cortex Development
- _id: 059F6AB4-7A3F-11EA-A408-12923DDC885E
  grant_number: F07805
  name: Molecular Mechanisms of Neural Stem Cell Lineage Progression
publication: The Journal of Neuroscience
publication_identifier:
  eissn:
  - 1529-2401
  issn:
  - 0270-6474
publication_status: published
publisher: Society for Neuroscience
quality_controlled: '1'
scopus_import: '1'
status: public
title: The logic of developing neocortical circuits in health and disease
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 41
year: '2021'
...
---
_id: '9082'
abstract:
- lang: eng
  text: Acquired mutations are sufficiently frequent such that the genome of a single
    cell offers a record of its history of cell divisions. Among more common somatic
    genomic alterations are loss of heterozygosity (LOH). Large LOH events are potentially
    detectable in single cell RNA sequencing (scRNA-seq) datasets as tracts of monoallelic
    expression for constitutionally heterozygous single nucleotide variants (SNVs)
    located among contiguous genes. We identified runs of monoallelic expression,
    consistent with LOH, uniquely distributed throughout the genome in single cell
    brain cortex transcriptomes of F1 hybrids involving different inbred mouse strains.
    We then phylogenetically reconstructed single cell lineages and simultaneously
    identified cell types by corresponding gene expression patterns. Our results are
    consistent with progenitor cells giving rise to multiple cortical cell types through
    stereotyped expansion and distinct waves of neurogenesis. Compared to engineered
    recording systems, LOH events accumulate throughout the genome and across the
    lifetime of an organism, affording tremendous capacity for encoding lineage information
    and increasing resolution for later cell divisions. This approach can conceivably
    be computationally incorporated into scRNA-seq analysis and may be useful for
    organisms where genetic engineering is prohibitive, such as humans.
acknowledgement: "We thank Bill Bolosky, Microsoft Research, for earlier work showing
  proof of concept in TCGA\r\nbulk RNA-seq data. Supported by the Paul G. Allen Frontiers
  Group (University of Washington);\r\nNIH R00HG010152 (Dartmouth); and NÖ Forschung
  und Bildung n[f+b] life science call grant\r\n(C13-002) to SH, and the European
  Research Council (ERC) under the European Union’s\r\nHorizon 2020 research and innovation
  program 725780 LinPro to SH."
article_processing_charge: No
author:
- first_name: Donovan J.
  full_name: Anderson, Donovan J.
  last_name: Anderson
- first_name: Florian
  full_name: Pauler, Florian
  id: 48EA0138-F248-11E8-B48F-1D18A9856A87
  last_name: Pauler
- first_name: Aaron
  full_name: McKenna, Aaron
  last_name: McKenna
- first_name: Jay
  full_name: Shendure, Jay
  last_name: Shendure
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
- first_name: Marshall S.
  full_name: Horwitz, Marshall S.
  last_name: Horwitz
citation:
  ama: Anderson DJ, Pauler F, McKenna A, Shendure J, Hippenmeyer S, Horwitz MS. Simultaneous
    identification of brain cell type and lineage via single cell RNA sequencing.
    <i>bioRxiv</i>. doi:<a href="https://doi.org/10.1101/2020.12.31.425016">10.1101/2020.12.31.425016</a>
  apa: Anderson, D. J., Pauler, F., McKenna, A., Shendure, J., Hippenmeyer, S., &#38;
    Horwitz, M. S. (n.d.). Simultaneous identification of brain cell type and lineage
    via single cell RNA sequencing. <i>bioRxiv</i>. Cold Spring Harbor Laboratory.
    <a href="https://doi.org/10.1101/2020.12.31.425016">https://doi.org/10.1101/2020.12.31.425016</a>
  chicago: Anderson, Donovan J., Florian Pauler, Aaron McKenna, Jay Shendure, Simon
    Hippenmeyer, and Marshall S. Horwitz. “Simultaneous Identification of Brain Cell
    Type and Lineage via Single Cell RNA Sequencing.” <i>BioRxiv</i>. Cold Spring
    Harbor Laboratory, n.d. <a href="https://doi.org/10.1101/2020.12.31.425016">https://doi.org/10.1101/2020.12.31.425016</a>.
  ieee: D. J. Anderson, F. Pauler, A. McKenna, J. Shendure, S. Hippenmeyer, and M.
    S. Horwitz, “Simultaneous identification of brain cell type and lineage via single
    cell RNA sequencing,” <i>bioRxiv</i>. Cold Spring Harbor Laboratory.
  ista: Anderson DJ, Pauler F, McKenna A, Shendure J, Hippenmeyer S, Horwitz MS. Simultaneous
    identification of brain cell type and lineage via single cell RNA sequencing.
    bioRxiv, <a href="https://doi.org/10.1101/2020.12.31.425016">10.1101/2020.12.31.425016</a>.
  mla: Anderson, Donovan J., et al. “Simultaneous Identification of Brain Cell Type
    and Lineage via Single Cell RNA Sequencing.” <i>BioRxiv</i>, Cold Spring Harbor
    Laboratory, doi:<a href="https://doi.org/10.1101/2020.12.31.425016">10.1101/2020.12.31.425016</a>.
  short: D.J. Anderson, F. Pauler, A. McKenna, J. Shendure, S. Hippenmeyer, M.S. Horwitz,
    BioRxiv (n.d.).
date_created: 2021-02-04T07:23:23Z
date_published: 2021-01-01T00:00:00Z
date_updated: 2021-02-04T07:29:53Z
day: '01'
department:
- _id: SiHi
doi: 10.1101/2020.12.31.425016
ec_funded: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1101/2020.12.31.425016
month: '01'
oa: 1
oa_version: Preprint
project:
- _id: 260018B0-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '725780'
  name: Principles of Neural Stem Cell Lineage Progression in Cerebral Cortex Development
publication: bioRxiv
publication_status: submitted
publisher: Cold Spring Harbor Laboratory
status: public
title: Simultaneous identification of brain cell type and lineage via single cell
  RNA sequencing
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2021'
...
---
_id: '9093'
abstract:
- lang: eng
  text: We employ the Gross-Pitaevskii equation to study acoustic emission generated
    in a uniform Bose gas by a static impurity. The impurity excites a sound-wave
    packet, which propagates through the gas. We calculate the shape of this wave
    packet in the limit of long wave lengths, and argue that it is possible to extract
    properties of the impurity by observing this shape. We illustrate here this possibility
    for a Bose gas with a trapped impurity atom -- an example of a relevant experimental
    setup. Presented results are general for all one-dimensional systems described
    by the nonlinear Schrödinger equation and can also be used in nonatomic systems,
    e.g., to analyze light propagation in nonlinear optical media. Finally, we calculate
    the shape of the sound-wave packet for a three-dimensional Bose gas assuming a
    spherically symmetric perturbation.
acknowledgement: "We acknowledge fruitful discussions with Dr. Simos Mistakidis regarding
  beyond mean-field\r\neffects in our system. We also thank Prof. Maxim Olshanii for
  valuable suggestions to improve\r\nthe manuscript.O.V.M acknowledges the support
  from the National Science Foundation\r\nthrough grants No. PHY-1402249, No. PHY-1607221,
  and No. PHY-1912542 and the\r\nBinational (US-Israel) Science Foundation through
  grant No. 2015616, as well as by the Israel\r\nScience Foundation (grant No. 1287/17)
  and from the German Aeronautics and Space Administration\r\n(DLR) through Grant
  No. 50WM1957. This work has also received funding from\r\nthe DFG Project No.413495248
  [VO 2437/1-1] and European Union’s Horizon 2020 research\r\nand innovation programme
  under the Marie Skłodowska-Curie Grant Agreement No. 754411\r\n(A. G. V.)"
article_number: '025'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Oleksandr
  full_name: Marchukov, Oleksandr
  last_name: Marchukov
- first_name: Artem
  full_name: Volosniev, Artem
  id: 37D278BC-F248-11E8-B48F-1D18A9856A87
  last_name: Volosniev
  orcid: 0000-0003-0393-5525
citation:
  ama: Marchukov O, Volosniev A. Shape of a sound wave in a weakly-perturbed Bose
    gas. <i>SciPost Physics</i>. 2021;10(2). doi:<a href="https://doi.org/10.21468/scipostphys.10.2.025">10.21468/scipostphys.10.2.025</a>
  apa: Marchukov, O., &#38; Volosniev, A. (2021). Shape of a sound wave in a weakly-perturbed
    Bose gas. <i>SciPost Physics</i>. SciPost Foundation. <a href="https://doi.org/10.21468/scipostphys.10.2.025">https://doi.org/10.21468/scipostphys.10.2.025</a>
  chicago: Marchukov, Oleksandr, and Artem Volosniev. “Shape of a Sound Wave in a
    Weakly-Perturbed Bose Gas.” <i>SciPost Physics</i>. SciPost Foundation, 2021.
    <a href="https://doi.org/10.21468/scipostphys.10.2.025">https://doi.org/10.21468/scipostphys.10.2.025</a>.
  ieee: O. Marchukov and A. Volosniev, “Shape of a sound wave in a weakly-perturbed
    Bose gas,” <i>SciPost Physics</i>, vol. 10, no. 2. SciPost Foundation, 2021.
  ista: Marchukov O, Volosniev A. 2021. Shape of a sound wave in a weakly-perturbed
    Bose gas. SciPost Physics. 10(2), 025.
  mla: Marchukov, Oleksandr, and Artem Volosniev. “Shape of a Sound Wave in a Weakly-Perturbed
    Bose Gas.” <i>SciPost Physics</i>, vol. 10, no. 2, 025, SciPost Foundation, 2021,
    doi:<a href="https://doi.org/10.21468/scipostphys.10.2.025">10.21468/scipostphys.10.2.025</a>.
  short: O. Marchukov, A. Volosniev, SciPost Physics 10 (2021).
date_created: 2021-02-04T12:39:24Z
date_published: 2021-02-03T00:00:00Z
date_updated: 2023-08-07T13:39:37Z
day: '03'
ddc:
- '530'
department:
- _id: MiLe
doi: 10.21468/scipostphys.10.2.025
ec_funded: 1
external_id:
  arxiv:
  - '2004.08075'
  isi:
  - '000646783100027'
file:
- access_level: open_access
  checksum: 9fd614b7ab49999e7267874df2582f7e
  content_type: application/pdf
  creator: dernst
  date_created: 2021-02-09T07:06:22Z
  date_updated: 2021-02-09T07:06:22Z
  file_id: '9105'
  file_name: 2021_SciPostPhysics_Marchukov.pdf
  file_size: 666512
  relation: main_file
  success: 1
file_date_updated: 2021-02-09T07:06:22Z
has_accepted_license: '1'
intvolume: '        10'
isi: 1
issue: '2'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '754411'
  name: ISTplus - Postdoctoral Fellowships
publication: SciPost Physics
publication_identifier:
  issn:
  - 2542-4653
publication_status: published
publisher: SciPost Foundation
quality_controlled: '1'
status: public
title: Shape of a sound wave in a weakly-perturbed Bose gas
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 10
year: '2021'
...
---
_id: '9094'
abstract:
- lang: eng
  text: Dendritic cells (DCs) are crucial for the priming of naive T cells and the
    initiation of adaptive immunity. Priming is initiated at a heterologous cell–cell
    contact, the immunological synapse (IS). While it is established that F-actin
    dynamics regulates signaling at the T cell side of the contact, little is known
    about the cytoskeletal contribution on the DC side. Here, we show that the DC
    actin cytoskeleton is decisive for the formation of a multifocal synaptic structure,
    which correlates with T cell priming efficiency. DC actin at the IS appears in
    transient foci that are dynamized by the WAVE regulatory complex (WRC). The absence
    of the WRC in DCs leads to stabilized contacts with T cells, caused by an increase
    in ICAM1-integrin–mediated cell–cell adhesion. This results in lower numbers of
    activated and proliferating T cells, demonstrating an important role for DC actin
    in the regulation of immune synapse functionality.
article_number: e202006081
article_processing_charge: No
article_type: original
author:
- first_name: Alexander F
  full_name: Leithner, Alexander F
  id: 3B1B77E4-F248-11E8-B48F-1D18A9856A87
  last_name: Leithner
  orcid: 0000-0002-1073-744X
- first_name: LM
  full_name: Altenburger, LM
  last_name: Altenburger
- first_name: R
  full_name: Hauschild, R
  last_name: Hauschild
- first_name: Frank P
  full_name: Assen, Frank P
  id: 3A8E7F24-F248-11E8-B48F-1D18A9856A87
  last_name: Assen
  orcid: 0000-0003-3470-6119
- first_name: K
  full_name: Rottner, K
  last_name: Rottner
- first_name: Stradal
  full_name: TEB, Stradal
  last_name: TEB
- first_name: A
  full_name: Diz-Muñoz, A
  last_name: Diz-Muñoz
- first_name: JV
  full_name: Stein, JV
  last_name: Stein
- first_name: Michael K
  full_name: Sixt, Michael K
  id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87
  last_name: Sixt
  orcid: 0000-0002-6620-9179
citation:
  ama: Leithner AF, Altenburger L, Hauschild R, et al. Dendritic cell actin dynamics
    control contact duration and priming efficiency at the immunological synapse.
    <i>Journal of Cell Biology</i>. 2021;220(4). doi:<a href="https://doi.org/10.1083/jcb.202006081">10.1083/jcb.202006081</a>
  apa: Leithner, A. F., Altenburger, L., Hauschild, R., Assen, F. P., Rottner, K.,
    TEB, S., … Sixt, M. K. (2021). Dendritic cell actin dynamics control contact duration
    and priming efficiency at the immunological synapse. <i>Journal of Cell Biology</i>.
    Rockefeller University Press. <a href="https://doi.org/10.1083/jcb.202006081">https://doi.org/10.1083/jcb.202006081</a>
  chicago: Leithner, Alexander F, LM Altenburger, R Hauschild, Frank P Assen, K Rottner,
    Stradal TEB, A Diz-Muñoz, JV Stein, and Michael K Sixt. “Dendritic Cell Actin
    Dynamics Control Contact Duration and Priming Efficiency at the Immunological
    Synapse.” <i>Journal of Cell Biology</i>. Rockefeller University Press, 2021.
    <a href="https://doi.org/10.1083/jcb.202006081">https://doi.org/10.1083/jcb.202006081</a>.
  ieee: A. F. Leithner <i>et al.</i>, “Dendritic cell actin dynamics control contact
    duration and priming efficiency at the immunological synapse,” <i>Journal of Cell
    Biology</i>, vol. 220, no. 4. Rockefeller University Press, 2021.
  ista: Leithner AF, Altenburger L, Hauschild R, Assen FP, Rottner K, TEB S, Diz-Muñoz
    A, Stein J, Sixt MK. 2021. Dendritic cell actin dynamics control contact duration
    and priming efficiency at the immunological synapse. Journal of Cell Biology.
    220(4), e202006081.
  mla: Leithner, Alexander F., et al. “Dendritic Cell Actin Dynamics Control Contact
    Duration and Priming Efficiency at the Immunological Synapse.” <i>Journal of Cell
    Biology</i>, vol. 220, no. 4, e202006081, Rockefeller University Press, 2021,
    doi:<a href="https://doi.org/10.1083/jcb.202006081">10.1083/jcb.202006081</a>.
  short: A.F. Leithner, L. Altenburger, R. Hauschild, F.P. Assen, K. Rottner, S. TEB,
    A. Diz-Muñoz, J. Stein, M.K. Sixt, Journal of Cell Biology 220 (2021).
date_created: 2021-02-05T10:08:04Z
date_published: 2021-04-05T00:00:00Z
date_updated: 2023-09-05T13:57:53Z
day: '05'
ddc:
- '570'
department:
- _id: MiSi
doi: 10.1083/jcb.202006081
external_id:
  isi:
  - '000626365700001'
  pmid:
  - '33533935'
file:
- access_level: open_access
  checksum: 843ebc153847c8626e13c9c5ce71d533
  content_type: application/pdf
  creator: dernst
  date_created: 2022-05-12T14:16:21Z
  date_updated: 2022-05-12T14:16:21Z
  file_id: '11367'
  file_name: 2021_JournCellBiology_Leithner.pdf
  file_size: 5102328
  relation: main_file
  success: 1
file_date_updated: 2022-05-12T14:16:21Z
has_accepted_license: '1'
intvolume: '       220'
isi: 1
issue: '4'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
pmid: 1
publication: Journal of Cell Biology
publication_identifier:
  eissn:
  - 1540-8140
  issn:
  - 0021-9525
publication_status: published
publisher: Rockefeller University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Dendritic cell actin dynamics control contact duration and priming efficiency
  at the immunological synapse
tmp:
  image: /images/cc_by_nc_sa.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC
    BY-NC-SA 4.0)
  short: CC BY-NC-SA (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 220
year: '2021'
...
---
_id: '9097'
abstract:
- lang: eng
  text: Psoriasis is a chronic inflammatory skin disease clinically characterized
    by the appearance of red colored, well-demarcated plaques with thickened skin
    and with silvery scales. Recent studies have established the involvement of a
    complex signalling network of interactions between cytokines, immune cells and
    skin cells called keratinocytes. Keratinocytes form the cells of the outermost
    layer of the skin (epidermis). Visible plaques in psoriasis are developed due
    to the fast proliferation and unusual differentiation of keratinocyte cells. Despite
    that, the exact mechanism of the appearance of these plaques in the cytokine-immune
    cell network is not clear. A mathematical model embodying interactions between
    key immune cells believed to be involved in psoriasis, keratinocytes and relevant
    cytokines has been developed. The complex network formed of these interactions
    poses several challenges. Here, we choose to study subnetworks of this complex
    network and initially focus on interactions involving TNFα, IL-23/IL-17, and IL-15.
    These are chosen based on known evidence of their therapeutic efficacy. In addition,
    we explore the role of IL-15 in the pathogenesis of psoriasis and its potential
    as a future drug target for a novel treatment option. We perform steady state
    analyses for these subnetworks and demonstrate that the interactions between cells,
    driven by cytokines could cause the emergence of a psoriasis state (hyper-proliferation
    of keratinocytes) when levels of TNFα, IL-23/IL-17 or IL-15 are increased. The
    model results explain and support the clinical potentiality of anti-cytokine treatments.
    Interestingly, our results suggest different dynamic scenarios underpin the pathogenesis
    of psoriasis, depending upon the dominant cytokines of subnetworks. We observed
    that the increase in the level of IL-23/IL-17 and IL-15 could lead to psoriasis
    via a bistable route, whereas an increase in the level of TNFα would lead to a
    monotonic and gradual disease progression. Further, we demonstrate how this insight,
    bistability, could be exploited to improve the current therapies and develop novel
    treatment strategies for psoriasis.
acknowledgement: RP acknowledges the Department of Science and Technology, India for
  the support through the DST-INSPIRE Faculty Award (DST/INSPIRE/04/2015/001939).
  This work was supported by the Engineering and Physical Sciences Research Council
  (EPSRC), United Kingdom (Grant numbers EP/J018295/1, EP/J018392/1, EP/N014391/1).
  The contribution of RP was also supported by the later Grant. This work was generously
  supported by the Welcome Trust Institutional Strategic Support Award (204909/Z/16/Z)
  too. The contribution of MG was supported by the EPSRC via EP/N014391/1 and a Wellcome
  Trust Institutional Strategic Support Award (WT105618MA). The contribution of YA
  was generously supported by the Wellcome Trust Institutional Strategic Support Award
  (WT105618MA).
article_number: '2204'
article_processing_charge: No
article_type: original
author:
- first_name: Rakesh
  full_name: Pandey, Rakesh
  last_name: Pandey
- first_name: Yusur
  full_name: Al-Nuaimi, Yusur
  last_name: Al-Nuaimi
- first_name: Rajiv Kumar
  full_name: Mishra, Rajiv Kumar
  id: 46CB58F2-F248-11E8-B48F-1D18A9856A87
  last_name: Mishra
- first_name: Sarah K.
  full_name: Spurgeon, Sarah K.
  last_name: Spurgeon
- first_name: Marc
  full_name: Goodfellow, Marc
  last_name: Goodfellow
citation:
  ama: Pandey R, Al-Nuaimi Y, Mishra RK, Spurgeon SK, Goodfellow M. Role of subnetworks
    mediated by TNF α, IL-23/IL-17 and IL-15 in a network involved in the pathogenesis
    of psoriasis. <i>Scientific Reports</i>. 2021;11. doi:<a href="https://doi.org/10.1038/s41598-020-80507-7">10.1038/s41598-020-80507-7</a>
  apa: Pandey, R., Al-Nuaimi, Y., Mishra, R. K., Spurgeon, S. K., &#38; Goodfellow,
    M. (2021). Role of subnetworks mediated by TNF α, IL-23/IL-17 and IL-15 in a network
    involved in the pathogenesis of psoriasis. <i>Scientific Reports</i>. Springer
    Nature. <a href="https://doi.org/10.1038/s41598-020-80507-7">https://doi.org/10.1038/s41598-020-80507-7</a>
  chicago: Pandey, Rakesh, Yusur Al-Nuaimi, Rajiv Kumar Mishra, Sarah K. Spurgeon,
    and Marc Goodfellow. “Role of Subnetworks Mediated by TNF α, IL-23/IL-17 and IL-15
    in a Network Involved in the Pathogenesis of Psoriasis.” <i>Scientific Reports</i>.
    Springer Nature, 2021. <a href="https://doi.org/10.1038/s41598-020-80507-7">https://doi.org/10.1038/s41598-020-80507-7</a>.
  ieee: R. Pandey, Y. Al-Nuaimi, R. K. Mishra, S. K. Spurgeon, and M. Goodfellow,
    “Role of subnetworks mediated by TNF α, IL-23/IL-17 and IL-15 in a network involved
    in the pathogenesis of psoriasis,” <i>Scientific Reports</i>, vol. 11. Springer
    Nature, 2021.
  ista: Pandey R, Al-Nuaimi Y, Mishra RK, Spurgeon SK, Goodfellow M. 2021. Role of
    subnetworks mediated by TNF α, IL-23/IL-17 and IL-15 in a network involved in
    the pathogenesis of psoriasis. Scientific Reports. 11, 2204.
  mla: Pandey, Rakesh, et al. “Role of Subnetworks Mediated by TNF α, IL-23/IL-17
    and IL-15 in a Network Involved in the Pathogenesis of Psoriasis.” <i>Scientific
    Reports</i>, vol. 11, 2204, Springer Nature, 2021, doi:<a href="https://doi.org/10.1038/s41598-020-80507-7">10.1038/s41598-020-80507-7</a>.
  short: R. Pandey, Y. Al-Nuaimi, R.K. Mishra, S.K. Spurgeon, M. Goodfellow, Scientific
    Reports 11 (2021).
date_created: 2021-02-07T23:01:12Z
date_published: 2021-01-26T00:00:00Z
date_updated: 2022-08-19T07:22:23Z
day: '26'
ddc:
- '570'
department:
- _id: PeJo
doi: 10.1038/s41598-020-80507-7
file:
- access_level: open_access
  checksum: e8a68df48750712671f5c47b0228e531
  content_type: application/pdf
  creator: dernst
  date_created: 2021-02-09T07:33:23Z
  date_updated: 2021-02-09T07:33:23Z
  file_id: '9106'
  file_name: 2021_ScientificReports_Pandey.pdf
  file_size: 2885056
  relation: main_file
  success: 1
file_date_updated: 2021-02-09T07:33:23Z
has_accepted_license: '1'
intvolume: '        11'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
publication: Scientific Reports
publication_identifier:
  eissn:
  - '20452322'
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Role of subnetworks mediated by TNF α, IL-23/IL-17 and IL-15 in a network involved
  in the pathogenesis of psoriasis
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 11
year: '2021'
...
---
_id: '9098'
abstract:
- lang: eng
  text: "We study properties of the volume of projections of the n-dimensional\r\ncross-polytope
    $\\crosp^n = \\{ x \\in \\R^n \\mid |x_1| + \\dots + |x_n| \\leqslant 1\\}.$ We
    prove that the projection of $\\crosp^n$ onto a k-dimensional coordinate subspace
    has the maximum possible volume for k=2 and for k=3.\r\nWe obtain the exact lower
    bound on the volume of such a projection onto a two-dimensional plane. Also, we
    show that there exist local maxima which are not global ones for the volume of
    a projection of $\\crosp^n$ onto a k-dimensional subspace for any n>k⩾2."
acknowledgement: Research was supported by the Russian Foundation for Basic Research,
  project 18-01-00036A (Theorems 1.5 and 5.3) and by the Ministry of Education and
  Science of the Russian Federation in the framework of MegaGrant no 075-15-2019-1926
  (Theorems 1.2 and 7.3).
article_number: '112312'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Grigory
  full_name: Ivanov, Grigory
  id: 87744F66-5C6F-11EA-AFE0-D16B3DDC885E
  last_name: Ivanov
citation:
  ama: Ivanov G. On the volume of projections of the cross-polytope. <i>Discrete Mathematics</i>.
    2021;344(5). doi:<a href="https://doi.org/10.1016/j.disc.2021.112312">10.1016/j.disc.2021.112312</a>
  apa: Ivanov, G. (2021). On the volume of projections of the cross-polytope. <i>Discrete
    Mathematics</i>. Elsevier. <a href="https://doi.org/10.1016/j.disc.2021.112312">https://doi.org/10.1016/j.disc.2021.112312</a>
  chicago: Ivanov, Grigory. “On the Volume of Projections of the Cross-Polytope.”
    <i>Discrete Mathematics</i>. Elsevier, 2021. <a href="https://doi.org/10.1016/j.disc.2021.112312">https://doi.org/10.1016/j.disc.2021.112312</a>.
  ieee: G. Ivanov, “On the volume of projections of the cross-polytope,” <i>Discrete
    Mathematics</i>, vol. 344, no. 5. Elsevier, 2021.
  ista: Ivanov G. 2021. On the volume of projections of the cross-polytope. Discrete
    Mathematics. 344(5), 112312.
  mla: Ivanov, Grigory. “On the Volume of Projections of the Cross-Polytope.” <i>Discrete
    Mathematics</i>, vol. 344, no. 5, 112312, Elsevier, 2021, doi:<a href="https://doi.org/10.1016/j.disc.2021.112312">10.1016/j.disc.2021.112312</a>.
  short: G. Ivanov, Discrete Mathematics 344 (2021).
date_created: 2021-02-07T23:01:12Z
date_published: 2021-05-01T00:00:00Z
date_updated: 2023-08-07T13:40:37Z
day: '01'
department:
- _id: UlWa
doi: 10.1016/j.disc.2021.112312
external_id:
  arxiv:
  - '1808.09165'
  isi:
  - '000633365200001'
intvolume: '       344'
isi: 1
issue: '5'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1808.09165
month: '05'
oa: 1
oa_version: Preprint
publication: Discrete Mathematics
publication_identifier:
  issn:
  - 0012365X
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: On the volume of projections of the cross-polytope
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 344
year: '2021'
...
---
_id: '9099'
abstract:
- lang: eng
  text: We show that on an Abelian variety over an algebraically closed field of positive
    characteristic, the obstruction to lifting an automorphism to a field of characteristic
    zero as a morphism vanishes if and only if it vanishes for lifting it as a derived
    autoequivalence. We also compare the deformation space of these two types of deformations.
acknowledgement: I would like to thank Piotr Achinger, Daniel Huybrechts, Katrina
  Honigs, Marcin Lara, and Maciek Zdanowicz for the mathematical discussions, Tamas
  Hausel for hosting me in his research group at IST Austria, and the referees for
  their valuable suggestions. This research has received funding from the European
  Union’s Horizon 2020 research and innovation programme under Marie Sklodowska-Curie
  Grant Agreement No. 754411.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Tanya K
  full_name: Srivastava, Tanya K
  id: 4D046628-F248-11E8-B48F-1D18A9856A87
  last_name: Srivastava
citation:
  ama: Srivastava TK. Lifting automorphisms on Abelian varieties as derived autoequivalences.
    <i>Archiv der Mathematik</i>. 2021;116(5):515-527. doi:<a href="https://doi.org/10.1007/s00013-020-01564-y">10.1007/s00013-020-01564-y</a>
  apa: Srivastava, T. K. (2021). Lifting automorphisms on Abelian varieties as derived
    autoequivalences. <i>Archiv Der Mathematik</i>. Springer Nature. <a href="https://doi.org/10.1007/s00013-020-01564-y">https://doi.org/10.1007/s00013-020-01564-y</a>
  chicago: Srivastava, Tanya K. “Lifting Automorphisms on Abelian Varieties as Derived
    Autoequivalences.” <i>Archiv Der Mathematik</i>. Springer Nature, 2021. <a href="https://doi.org/10.1007/s00013-020-01564-y">https://doi.org/10.1007/s00013-020-01564-y</a>.
  ieee: T. K. Srivastava, “Lifting automorphisms on Abelian varieties as derived autoequivalences,”
    <i>Archiv der Mathematik</i>, vol. 116, no. 5. Springer Nature, pp. 515–527, 2021.
  ista: Srivastava TK. 2021. Lifting automorphisms on Abelian varieties as derived
    autoequivalences. Archiv der Mathematik. 116(5), 515–527.
  mla: Srivastava, Tanya K. “Lifting Automorphisms on Abelian Varieties as Derived
    Autoequivalences.” <i>Archiv Der Mathematik</i>, vol. 116, no. 5, Springer Nature,
    2021, pp. 515–27, doi:<a href="https://doi.org/10.1007/s00013-020-01564-y">10.1007/s00013-020-01564-y</a>.
  short: T.K. Srivastava, Archiv Der Mathematik 116 (2021) 515–527.
date_created: 2021-02-07T23:01:13Z
date_published: 2021-05-01T00:00:00Z
date_updated: 2023-08-07T13:42:38Z
day: '01'
department:
- _id: TaHa
doi: 10.1007/s00013-020-01564-y
ec_funded: 1
external_id:
  arxiv:
  - '2001.07762'
  isi:
  - '000612580200001'
intvolume: '       116'
isi: 1
issue: '5'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2001.07762
month: '05'
oa: 1
oa_version: Preprint
page: 515-527
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '754411'
  name: ISTplus - Postdoctoral Fellowships
publication: Archiv der Mathematik
publication_identifier:
  eissn:
  - '14208938'
  issn:
  - 0003889X
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Lifting automorphisms on Abelian varieties as derived autoequivalences
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 116
year: '2021'
...
---
_id: '9100'
abstract:
- lang: eng
  text: 'Marine environments are inhabited by a broad representation of the tree of
    life, yet our understanding of speciation in marine ecosystems is extremely limited
    compared with terrestrial and freshwater environments. Developing a more comprehensive
    picture of speciation in marine environments requires that we ''dive under the
    surface'' by studying a wider range of taxa and ecosystems is necessary for a
    more comprehensive picture of speciation. Although studying marine evolutionary
    processes is often challenging, recent technological advances in different fields,
    from maritime engineering to genomics, are making it increasingly possible to
    study speciation of marine life forms across diverse ecosystems and taxa. Motivated
    by recent research in the field, including the 14 contributions in this issue,
    we highlight and discuss six axes of research that we think will deepen our understanding
    of speciation in the marine realm: (a) study a broader range of marine environments
    and organisms; (b) identify the reproductive barriers driving speciation between
    marine taxa; (c) understand the role of different genomic architectures underlying
    reproductive isolation; (d) infer the evolutionary history of divergence using
    model‐based approaches; (e) study patterns of hybridization and introgression
    between marine taxa; and (f) implement highly interdisciplinary, collaborative
    research programmes. In outlining these goals, we hope to inspire researchers
    to continue filling this critical knowledge gap surrounding the origins of marine
    biodiversity.'
acknowledgement: "We would like to thank all the participants in the speciation symposium
  of the Marine Evolution Conference in Sweden for the interesting discussions and
  to all the contributors to this special\r\nissue. We thank Nicolas Bierne and Wolf
  Blanckenhorn (reviewer and editor, respectively) for valuable suggestions during
  the revision of the manuscript, and Roger K. Butlin and Anja M. Westram for very
  helpful comments on a previous draft. We would also like to thank Wolf Blanckenhorn
  and Nicola Cook, the Editor in Chief and the Managing Editor of the Journal of Evolutionary
  Biology, respectively, for the encouragement and support in putting together this
  special issue, and to all reviewers involved. RF was financed by the European Union's
  Horizon 2020 Research and Innovation Programme under the Marie Sklodowska-Curie
  Grant Agreement Number 706376 and is currently financed by the FEDER Funds through
  the Operational Competitiveness Factors Program COMPETE and by National Funds through
  the Foundation for Science and Technology (FCT) within the scope of the project
  ‘Hybrabbid' (PTDC/BIA-EVL/30628/2017-POCI-01-0145-FEDER-030628). KJ was funded by
  the Swedish\r\nResearch Council, VR. SS was supported by NERC and ERC funding awarded
  to Roger K. Butlin."
article_processing_charge: No
article_type: original
author:
- first_name: Rui
  full_name: Faria, Rui
  last_name: Faria
- first_name: Kerstin
  full_name: Johannesson, Kerstin
  last_name: Johannesson
- first_name: Sean
  full_name: Stankowski, Sean
  id: 43161670-5719-11EA-8025-FABC3DDC885E
  last_name: Stankowski
citation:
  ama: 'Faria R, Johannesson K, Stankowski S. Speciation in marine environments: Diving
    under the surface. <i>Journal of Evolutionary Biology</i>. 2021;34(1):4-15. doi:<a
    href="https://doi.org/10.1111/jeb.13756">10.1111/jeb.13756</a>'
  apa: 'Faria, R., Johannesson, K., &#38; Stankowski, S. (2021). Speciation in marine
    environments: Diving under the surface. <i>Journal of Evolutionary Biology</i>.
    Wiley. <a href="https://doi.org/10.1111/jeb.13756">https://doi.org/10.1111/jeb.13756</a>'
  chicago: 'Faria, Rui, Kerstin Johannesson, and Sean Stankowski. “Speciation in Marine
    Environments: Diving under the Surface.” <i>Journal of Evolutionary Biology</i>.
    Wiley, 2021. <a href="https://doi.org/10.1111/jeb.13756">https://doi.org/10.1111/jeb.13756</a>.'
  ieee: 'R. Faria, K. Johannesson, and S. Stankowski, “Speciation in marine environments:
    Diving under the surface,” <i>Journal of Evolutionary Biology</i>, vol. 34, no.
    1. Wiley, pp. 4–15, 2021.'
  ista: 'Faria R, Johannesson K, Stankowski S. 2021. Speciation in marine environments:
    Diving under the surface. Journal of Evolutionary Biology. 34(1), 4–15.'
  mla: 'Faria, Rui, et al. “Speciation in Marine Environments: Diving under the Surface.”
    <i>Journal of Evolutionary Biology</i>, vol. 34, no. 1, Wiley, 2021, pp. 4–15,
    doi:<a href="https://doi.org/10.1111/jeb.13756">10.1111/jeb.13756</a>.'
  short: R. Faria, K. Johannesson, S. Stankowski, Journal of Evolutionary Biology
    34 (2021) 4–15.
date_created: 2021-02-07T23:01:13Z
date_published: 2021-01-18T00:00:00Z
date_updated: 2023-08-07T13:42:08Z
day: '18'
ddc:
- '570'
department:
- _id: NiBa
doi: 10.1111/jeb.13756
external_id:
  isi:
  - '000608367500001'
file:
- access_level: open_access
  checksum: 5755856a5368d4b4cdd6fad5ab27f4d1
  content_type: application/pdf
  creator: dernst
  date_created: 2021-02-09T09:04:02Z
  date_updated: 2021-02-09T09:04:02Z
  file_id: '9108'
  file_name: 2021_JourEvolBiology_Faria.pdf
  file_size: 561340
  relation: main_file
  success: 1
file_date_updated: 2021-02-09T09:04:02Z
has_accepted_license: '1'
intvolume: '        34'
isi: 1
issue: '1'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
page: 4-15
publication: Journal of Evolutionary Biology
publication_identifier:
  eissn:
  - '14209101'
  issn:
  - 1010061X
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Speciation in marine environments: Diving under the surface'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 34
year: '2021'
...
---
_id: '9101'
abstract:
- lang: eng
  text: 'Behavioral predispositions are innate tendencies of animals to behave in
    a given way without the input of learning. They increase survival chances and,
    due to environmental and ecological challenges, may vary substantially even between
    closely related taxa. These differences are likely to be especially pronounced
    in long-lived species like crocodilians. This order is particularly relevant for
    comparative cognition due to its phylogenetic proximity to birds. Here we compared
    early life behavioral predispositions in two Alligatoridae species. We exposed
    American alligator and spectacled caiman hatchlings to three different novel situations:
    a novel object, a novel environment that was open and a novel environment with
    a shelter. This was then repeated a week later. During exposure to the novel environments,
    alligators moved around more and explored a larger range of the arena than the
    caimans. When exposed to the novel object, the alligators reduced the mean distance
    to the novel object in the second phase, while the caimans further increased it,
    indicating diametrically opposite ontogenetic development in behavioral predispositions.
    Although all crocodilian hatchlings face comparable challenges, e.g., high predation
    pressure, the effectiveness of parental protection might explain the observed
    pattern. American alligators are apex predators capable of protecting their offspring
    against most dangers, whereas adult spectacled caimans are frequently predated
    themselves. Their distancing behavior might be related to increased predator avoidance
    and also explain the success of invasive spectacled caimans in the natural habitats
    of other crocodilians.'
acknowledgement: We thank Jamie Gilks and Terry Miles for their support at Crocodiles
  of the World. We are grateful to the Department of Cognitive Biology, University
  of Vienna for provision of working space and hardware. Finally, we would like to
  thank Cliodhna Quigley, Rachael Harrison and Urs A. Reber for discussion. Open Access
  funding provided by Lund University. This project was funded by the Marietta Blau
  grant (BMFWF) to S. A. R.
article_processing_charge: No
article_type: original
author:
- first_name: Stephan A.
  full_name: Reber, Stephan A.
  last_name: Reber
- first_name: Jinook
  full_name: Oh, Jinook
  id: 403169A4-080F-11EA-9993-BF3F3DDC885E
  last_name: Oh
  orcid: 0000-0001-7425-2372
- first_name: Judith
  full_name: Janisch, Judith
  last_name: Janisch
- first_name: Colin
  full_name: Stevenson, Colin
  last_name: Stevenson
- first_name: Shaun
  full_name: Foggett, Shaun
  last_name: Foggett
- first_name: Anna
  full_name: Wilkinson, Anna
  last_name: Wilkinson
citation:
  ama: Reber SA, Oh J, Janisch J, Stevenson C, Foggett S, Wilkinson A. Early life
    differences in behavioral predispositions in two Alligatoridae species. <i>Animal
    Cognition</i>. 2021;24(4):753-764. doi:<a href="https://doi.org/10.1007/s10071-020-01461-5">10.1007/s10071-020-01461-5</a>
  apa: Reber, S. A., Oh, J., Janisch, J., Stevenson, C., Foggett, S., &#38; Wilkinson,
    A. (2021). Early life differences in behavioral predispositions in two Alligatoridae
    species. <i>Animal Cognition</i>. Springer Nature. <a href="https://doi.org/10.1007/s10071-020-01461-5">https://doi.org/10.1007/s10071-020-01461-5</a>
  chicago: Reber, Stephan A., Jinook Oh, Judith Janisch, Colin Stevenson, Shaun Foggett,
    and Anna Wilkinson. “Early Life Differences in Behavioral Predispositions in Two
    Alligatoridae Species.” <i>Animal Cognition</i>. Springer Nature, 2021. <a href="https://doi.org/10.1007/s10071-020-01461-5">https://doi.org/10.1007/s10071-020-01461-5</a>.
  ieee: S. A. Reber, J. Oh, J. Janisch, C. Stevenson, S. Foggett, and A. Wilkinson,
    “Early life differences in behavioral predispositions in two Alligatoridae species,”
    <i>Animal Cognition</i>, vol. 24, no. 4. Springer Nature, pp. 753–764, 2021.
  ista: Reber SA, Oh J, Janisch J, Stevenson C, Foggett S, Wilkinson A. 2021. Early
    life differences in behavioral predispositions in two Alligatoridae species. Animal
    Cognition. 24(4), 753–764.
  mla: Reber, Stephan A., et al. “Early Life Differences in Behavioral Predispositions
    in Two Alligatoridae Species.” <i>Animal Cognition</i>, vol. 24, no. 4, Springer
    Nature, 2021, pp. 753–64, doi:<a href="https://doi.org/10.1007/s10071-020-01461-5">10.1007/s10071-020-01461-5</a>.
  short: S.A. Reber, J. Oh, J. Janisch, C. Stevenson, S. Foggett, A. Wilkinson, Animal
    Cognition 24 (2021) 753–764.
date_created: 2021-02-07T23:01:13Z
date_published: 2021-07-01T00:00:00Z
date_updated: 2023-08-07T13:41:08Z
day: '01'
ddc:
- '590'
department:
- _id: SyCr
doi: 10.1007/s10071-020-01461-5
external_id:
  isi:
  - '000608382100001'
file:
- access_level: open_access
  checksum: d9dfa0d1de6d684692b041d936dd858e
  content_type: application/pdf
  creator: dernst
  date_created: 2021-02-09T07:40:14Z
  date_updated: 2021-02-09T07:40:14Z
  file_id: '9107'
  file_name: 2021_AnimalCognition_Reber.pdf
  file_size: 1117991
  relation: main_file
  success: 1
file_date_updated: 2021-02-09T07:40:14Z
has_accepted_license: '1'
intvolume: '        24'
isi: 1
issue: '4'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
page: 753-764
publication: Animal Cognition
publication_identifier:
  eissn:
  - '14359456'
  issn:
  - '14359448'
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Early life differences in behavioral predispositions in two Alligatoridae species
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 24
year: '2021'
...
---
_id: '9111'
abstract:
- lang: eng
  text: 'We study the probabilistic convergence between the mapper graph and the Reeb
    graph of a topological space X equipped with a continuous function f:X→R. We first
    give a categorification of the mapper graph and the Reeb graph by interpreting
    them in terms of cosheaves and stratified covers of the real line R. We then introduce
    a variant of the classic mapper graph of Singh et al. (in: Eurographics symposium
    on point-based graphics, 2007), referred to as the enhanced mapper graph, and
    demonstrate that such a construction approximates the Reeb graph of (X,f) when
    it is applied to points randomly sampled from a probability density function concentrated
    on (X,f). Our techniques are based on the interleaving distance of constructible
    cosheaves and topological estimation via kernel density estimates. Following Munch
    and Wang (In: 32nd international symposium on computational geometry, volume 51
    of Leibniz international proceedings in informatics (LIPIcs), Dagstuhl, Germany,
    pp 53:1–53:16, 2016), we first show that the mapper graph of (X,f), a constructible
    R-space (with a fixed open cover), approximates the Reeb graph of the same space.
    We then construct an isomorphism between the mapper of (X,f) to the mapper of
    a super-level set of a probability density function concentrated on (X,f). Finally,
    building on the approach of Bobrowski et al. (Bernoulli 23(1):288–328, 2017b),
    we show that, with high probability, we can recover the mapper of the super-level
    set given a sufficiently large sample. Our work is the first to consider the mapper
    construction using the theory of cosheaves in a probabilistic setting. It is part
    of an ongoing effort to combine sheaf theory, probability, and statistics, to
    support topological data analysis with random data.'
acknowledgement: "AB was supported in part by the European Union’s Horizon 2020 research
  and innovation\r\nprogramme under the Marie Sklodowska-Curie GrantAgreement No.
  754411 and NSF IIS-1513616. OB was supported in part by the Israel Science Foundation,
  Grant 1965/19. BW was supported in part by NSF IIS-1513616 and DBI-1661375. EM was
  supported in part by NSF CMMI-1800466, DMS-1800446, and CCF-1907591.We would like
  to thank the Institute for Mathematics and its Applications for hosting a workshop
  titled Bridging Statistics and Sheaves in May 2018, where this work was conceived.\r\nOpen
  Access funding provided by Institute of Science and Technology (IST Austria)."
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Adam
  full_name: Brown, Adam
  id: 70B7FDF6-608D-11E9-9333-8535E6697425
  last_name: Brown
- first_name: Omer
  full_name: Bobrowski, Omer
  last_name: Bobrowski
- first_name: Elizabeth
  full_name: Munch, Elizabeth
  last_name: Munch
- first_name: Bei
  full_name: Wang, Bei
  last_name: Wang
citation:
  ama: Brown A, Bobrowski O, Munch E, Wang B. Probabilistic convergence and stability
    of random mapper graphs. <i>Journal of Applied and Computational Topology</i>.
    2021;5(1):99-140. doi:<a href="https://doi.org/10.1007/s41468-020-00063-x">10.1007/s41468-020-00063-x</a>
  apa: Brown, A., Bobrowski, O., Munch, E., &#38; Wang, B. (2021). Probabilistic convergence
    and stability of random mapper graphs. <i>Journal of Applied and Computational
    Topology</i>. Springer Nature. <a href="https://doi.org/10.1007/s41468-020-00063-x">https://doi.org/10.1007/s41468-020-00063-x</a>
  chicago: Brown, Adam, Omer Bobrowski, Elizabeth Munch, and Bei Wang. “Probabilistic
    Convergence and Stability of Random Mapper Graphs.” <i>Journal of Applied and
    Computational Topology</i>. Springer Nature, 2021. <a href="https://doi.org/10.1007/s41468-020-00063-x">https://doi.org/10.1007/s41468-020-00063-x</a>.
  ieee: A. Brown, O. Bobrowski, E. Munch, and B. Wang, “Probabilistic convergence
    and stability of random mapper graphs,” <i>Journal of Applied and Computational
    Topology</i>, vol. 5, no. 1. Springer Nature, pp. 99–140, 2021.
  ista: Brown A, Bobrowski O, Munch E, Wang B. 2021. Probabilistic convergence and
    stability of random mapper graphs. Journal of Applied and Computational Topology.
    5(1), 99–140.
  mla: Brown, Adam, et al. “Probabilistic Convergence and Stability of Random Mapper
    Graphs.” <i>Journal of Applied and Computational Topology</i>, vol. 5, no. 1,
    Springer Nature, 2021, pp. 99–140, doi:<a href="https://doi.org/10.1007/s41468-020-00063-x">10.1007/s41468-020-00063-x</a>.
  short: A. Brown, O. Bobrowski, E. Munch, B. Wang, Journal of Applied and Computational
    Topology 5 (2021) 99–140.
date_created: 2021-02-11T14:41:02Z
date_published: 2021-03-01T00:00:00Z
date_updated: 2023-09-05T15:37:56Z
day: '01'
ddc:
- '510'
department:
- _id: HeEd
doi: 10.1007/s41468-020-00063-x
ec_funded: 1
external_id:
  arxiv:
  - '1909.03488'
file:
- access_level: open_access
  checksum: 3f02e9d47c428484733da0f588a3c069
  content_type: application/pdf
  creator: dernst
  date_created: 2021-02-11T14:43:59Z
  date_updated: 2021-02-11T14:43:59Z
  file_id: '9112'
  file_name: 2020_JourApplCompTopology_Brown.pdf
  file_size: 2090265
  relation: main_file
  success: 1
file_date_updated: 2021-02-11T14:43:59Z
has_accepted_license: '1'
intvolume: '         5'
issue: '1'
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
page: 99-140
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '754411'
  name: ISTplus - Postdoctoral Fellowships
publication: Journal of Applied and Computational Topology
publication_identifier:
  eissn:
  - 2367-1734
  issn:
  - 2367-1726
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Probabilistic convergence and stability of random mapper graphs
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 5
year: '2021'
...
---
_id: '9113'
abstract:
- lang: eng
  text: “Hydrogen economy” could enable a carbon-neutral sustainable energy chain.
    However, issues with safety, storage, and transport of molecular hydrogen impede
    its realization. Alcohols as liquid H2 carriers could be enablers, but state-of-the-art
    reforming is difficult, requiring high temperatures >200 °C and pressures >25
    bar, and the resulting H2 is carbonized beyond tolerance levels for direct use
    in fuel cells. Here, we demonstrate ambient temperature and pressure alcohol reforming
    in a fuel cell (ARFC) with a simultaneous electrical power output. The alcohol
    is oxidized at the alkaline anode, where the resulting CO2 is sequestrated as
    carbonate. Carbon-free H2 is liberated at the acidic cathode. The neutralization
    energy between the alkaline anode and the acidic cathode drives the process, particularly
    the unusually high entropy gain (1.27-fold ΔH). The significantly positive temperature
    coefficient of the resulting electromotive force allows us to harvest a large
    fraction of the output energy from the surrounding, achieving a thermodynamic
    efficiency as high as 2.27. MoS2 as the cathode catalyst allows alcohol reforming
    even under open-air conditions, a challenge that state-of-the-art alcohol reforming
    failed to overcome. We further show reforming of a wide range of alcohols. The
    ARFC offers an unprecedented route toward hydrogen economy as CO2 is simultaneously
    captured and pure H2 produced at mild conditions.
acknowledgement: M.O.T. acknowledges DST/TMD/HFC/2 K18/58, DST-SERB, MHRD fast track,
  and DST Nanomission forfinancialassistance. Z.M.B. acknowledges CSIR-SRF fellowship
  fromMHRD, India. S.A.F. acknowledges support from IST Austria.
article_processing_charge: No
article_type: original
author:
- first_name: Zahid Manzoor
  full_name: Manzoor Bhat, Zahid Manzoor
  last_name: Manzoor Bhat
- first_name: Ravikumar
  full_name: Thimmappa, Ravikumar
  last_name: Thimmappa
- first_name: 'Neethu Christudas '
  full_name: 'Dargily, Neethu Christudas '
  last_name: Dargily
- first_name: 'Abdul '
  full_name: 'Raafik, Abdul '
  last_name: Raafik
- first_name: 'Alagar Raja '
  full_name: 'Kottaichamy, Alagar Raja '
  last_name: Kottaichamy
- first_name: 'Mruthyunjayachari Chattanahalli '
  full_name: 'Devendrachari, Mruthyunjayachari Chattanahalli '
  last_name: Devendrachari
- first_name: Mahesh
  full_name: Itagi, Mahesh
  last_name: Itagi
- first_name: Harish
  full_name: ' Makri Nimbegondi Kotresh, Harish'
  last_name: ' Makri Nimbegondi Kotresh'
- first_name: Stefan Alexander
  full_name: Freunberger, Stefan Alexander
  id: A8CA28E6-CE23-11E9-AD2D-EC27E6697425
  last_name: Freunberger
  orcid: 0000-0003-2902-5319
- first_name: 'Musthafa '
  full_name: 'Ottakam Thotiyl, Musthafa '
  last_name: Ottakam Thotiyl
citation:
  ama: Manzoor Bhat ZM, Thimmappa R, Dargily NC, et al. Ambient condition alcohol
    reforming to hydrogen with electricity output. <i>ACS Sustainable Chemistry and
    Engineering</i>. 2021;9(8):3104-3111. doi:<a href="https://doi.org/10.1021/acssuschemeng.0c07547">10.1021/acssuschemeng.0c07547</a>
  apa: Manzoor Bhat, Z. M., Thimmappa, R., Dargily, N. C., Raafik, A., Kottaichamy,
    A. R., Devendrachari, M. C., … Ottakam Thotiyl, M. (2021). Ambient condition alcohol
    reforming to hydrogen with electricity output. <i>ACS Sustainable Chemistry and
    Engineering</i>. American Chemical Society. <a href="https://doi.org/10.1021/acssuschemeng.0c07547">https://doi.org/10.1021/acssuschemeng.0c07547</a>
  chicago: Manzoor Bhat, Zahid Manzoor, Ravikumar Thimmappa, Neethu Christudas  Dargily,
    Abdul  Raafik, Alagar Raja  Kottaichamy, Mruthyunjayachari Chattanahalli  Devendrachari,
    Mahesh Itagi, Harish  Makri Nimbegondi Kotresh, Stefan Alexander Freunberger,
    and Musthafa  Ottakam Thotiyl. “Ambient Condition Alcohol Reforming to Hydrogen
    with Electricity Output.” <i>ACS Sustainable Chemistry and Engineering</i>. American
    Chemical Society, 2021. <a href="https://doi.org/10.1021/acssuschemeng.0c07547">https://doi.org/10.1021/acssuschemeng.0c07547</a>.
  ieee: Z. M. Manzoor Bhat <i>et al.</i>, “Ambient condition alcohol reforming to
    hydrogen with electricity output,” <i>ACS Sustainable Chemistry and Engineering</i>,
    vol. 9, no. 8. American Chemical Society, pp. 3104–3111, 2021.
  ista: Manzoor Bhat ZM, Thimmappa R, Dargily NC, Raafik A, Kottaichamy AR, Devendrachari
    MC, Itagi M,  Makri Nimbegondi Kotresh H, Freunberger SA, Ottakam Thotiyl M. 2021.
    Ambient condition alcohol reforming to hydrogen with electricity output. ACS Sustainable
    Chemistry and Engineering. 9(8), 3104–3111.
  mla: Manzoor Bhat, Zahid Manzoor, et al. “Ambient Condition Alcohol Reforming to
    Hydrogen with Electricity Output.” <i>ACS Sustainable Chemistry and Engineering</i>,
    vol. 9, no. 8, American Chemical Society, 2021, pp. 3104–11, doi:<a href="https://doi.org/10.1021/acssuschemeng.0c07547">10.1021/acssuschemeng.0c07547</a>.
  short: Z.M. Manzoor Bhat, R. Thimmappa, N.C. Dargily, A. Raafik, A.R. Kottaichamy,
    M.C. Devendrachari, M. Itagi, H.  Makri Nimbegondi Kotresh, S.A. Freunberger,
    M. Ottakam Thotiyl, ACS Sustainable Chemistry and Engineering 9 (2021) 3104–3111.
date_created: 2021-02-12T09:20:18Z
date_published: 2021-02-11T00:00:00Z
date_updated: 2023-08-07T13:43:19Z
day: '11'
department:
- _id: StFr
doi: 10.1021/acssuschemeng.0c07547
external_id:
  isi:
  - '000625460400010'
intvolume: '         9'
isi: 1
issue: '8'
language:
- iso: eng
month: '02'
oa_version: None
page: 3104-3111
publication: ACS Sustainable Chemistry and Engineering
publication_identifier:
  eissn:
  - 2168-0485
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Ambient condition alcohol reforming to hydrogen with electricity output
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 9
year: '2021'
...
---
_id: '9118'
abstract:
- lang: eng
  text: Cesium lead halides have intrinsically unstable crystal lattices and easily
    transform within perovskite and nonperovskite structures. In this work, we explore
    the conversion of the perovskite CsPbBr3 into Cs4PbBr6 in the presence of PbS
    at 450 °C to produce doped nanocrystal-based composites with embedded Cs4PbBr6
    nanoprecipitates. We show that PbBr2 is extracted from CsPbBr3 and diffuses into
    the PbS lattice with a consequent increase in the concentration of free charge
    carriers. This new doping strategy enables the adjustment of the density of charge
    carriers between 1019 and 1020 cm–3, and it may serve as a general strategy for
    doping other nanocrystal-based semiconductors.
acknowledgement: "M.C. has received funding from the European Union’s Horizon 2020
  research and innovation programme under the Marie Skłodowska-Curie Grant Agreement
  No. 665385. ICN2\r\nacknowledges funding from Generalitat de Catalunya 2017 SGR
  327. ICN2 is supported by the Severo Ochoa program from Spanish MINECO (Grant No.
  SEV-2017-0706) and is funded by the CERCA Programme/Generalitat de Catalunya. This
  project has received funding from the European Union’s Horizon 2020 research and
  innovation programme under grant agreement No 823717 − ESTEEM3. M.V.K. acknowledges
  the support by the European Research Council under the Horizon 2020 Framework Program
  (ERC Consolidator Grant SCALEHALO\r\nGrant Agreement No. 819740) and by FET-OPEN
  project no. 862656 (DROP-IT)."
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Mariano
  full_name: Calcabrini, Mariano
  id: 45D7531A-F248-11E8-B48F-1D18A9856A87
  last_name: Calcabrini
- first_name: Aziz
  full_name: Genc, Aziz
  last_name: Genc
- first_name: Yu
  full_name: Liu, Yu
  id: 2A70014E-F248-11E8-B48F-1D18A9856A87
  last_name: Liu
  orcid: 0000-0001-7313-6740
- first_name: Tobias
  full_name: Kleinhanns, Tobias
  id: 8BD9DE16-AB3C-11E9-9C8C-2A03E6697425
  last_name: Kleinhanns
- first_name: Seungho
  full_name: Lee, Seungho
  id: BB243B88-D767-11E9-B658-BC13E6697425
  last_name: Lee
  orcid: 0000-0002-6962-8598
- first_name: Dmitry N.
  full_name: Dirin, Dmitry N.
  last_name: Dirin
- first_name: Quinten A.
  full_name: Akkerman, Quinten A.
  last_name: Akkerman
- first_name: Maksym V.
  full_name: Kovalenko, Maksym V.
  last_name: Kovalenko
- first_name: Jordi
  full_name: Arbiol, Jordi
  last_name: Arbiol
- first_name: Maria
  full_name: Ibáñez, Maria
  id: 43C61214-F248-11E8-B48F-1D18A9856A87
  last_name: Ibáñez
  orcid: 0000-0001-5013-2843
citation:
  ama: Calcabrini M, Genc A, Liu Y, et al. Exploiting the lability of metal halide
    perovskites for doping semiconductor nanocomposites. <i>ACS Energy Letters</i>.
    2021;6(2):581-587. doi:<a href="https://doi.org/10.1021/acsenergylett.0c02448">10.1021/acsenergylett.0c02448</a>
  apa: Calcabrini, M., Genc, A., Liu, Y., Kleinhanns, T., Lee, S., Dirin, D. N., …
    Ibáñez, M. (2021). Exploiting the lability of metal halide perovskites for doping
    semiconductor nanocomposites. <i>ACS Energy Letters</i>. American Chemical Society.
    <a href="https://doi.org/10.1021/acsenergylett.0c02448">https://doi.org/10.1021/acsenergylett.0c02448</a>
  chicago: Calcabrini, Mariano, Aziz Genc, Yu Liu, Tobias Kleinhanns, Seungho Lee,
    Dmitry N. Dirin, Quinten A. Akkerman, Maksym V. Kovalenko, Jordi Arbiol, and Maria
    Ibáñez. “Exploiting the Lability of Metal Halide Perovskites for Doping Semiconductor
    Nanocomposites.” <i>ACS Energy Letters</i>. American Chemical Society, 2021. <a
    href="https://doi.org/10.1021/acsenergylett.0c02448">https://doi.org/10.1021/acsenergylett.0c02448</a>.
  ieee: M. Calcabrini <i>et al.</i>, “Exploiting the lability of metal halide perovskites
    for doping semiconductor nanocomposites,” <i>ACS Energy Letters</i>, vol. 6, no.
    2. American Chemical Society, pp. 581–587, 2021.
  ista: Calcabrini M, Genc A, Liu Y, Kleinhanns T, Lee S, Dirin DN, Akkerman QA, Kovalenko
    MV, Arbiol J, Ibáñez M. 2021. Exploiting the lability of metal halide perovskites
    for doping semiconductor nanocomposites. ACS Energy Letters. 6(2), 581–587.
  mla: Calcabrini, Mariano, et al. “Exploiting the Lability of Metal Halide Perovskites
    for Doping Semiconductor Nanocomposites.” <i>ACS Energy Letters</i>, vol. 6, no.
    2, American Chemical Society, 2021, pp. 581–87, doi:<a href="https://doi.org/10.1021/acsenergylett.0c02448">10.1021/acsenergylett.0c02448</a>.
  short: M. Calcabrini, A. Genc, Y. Liu, T. Kleinhanns, S. Lee, D.N. Dirin, Q.A. Akkerman,
    M.V. Kovalenko, J. Arbiol, M. Ibáñez, ACS Energy Letters 6 (2021) 581–587.
date_created: 2021-02-14T23:01:14Z
date_published: 2021-01-20T00:00:00Z
date_updated: 2023-08-07T13:46:00Z
day: '20'
ddc:
- '540'
department:
- _id: MaIb
doi: 10.1021/acsenergylett.0c02448
ec_funded: 1
external_id:
  isi:
  - '000619803400036'
file:
- access_level: open_access
  checksum: 6fa7374bf8b95fdfe6e6c595322a6689
  content_type: application/pdf
  creator: dernst
  date_created: 2021-02-17T07:36:52Z
  date_updated: 2021-02-17T07:36:52Z
  file_id: '9155'
  file_name: 2021_ACSEnergyLetters_Calcabrini.pdf
  file_size: 5071201
  relation: main_file
  success: 1
file_date_updated: 2021-02-17T07:36:52Z
has_accepted_license: '1'
intvolume: '         6'
isi: 1
issue: '2'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
page: 581-587
project:
- _id: 2564DBCA-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '665385'
  name: International IST Doctoral Program
publication: ACS Energy Letters
publication_identifier:
  eissn:
  - 2380-8195
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
related_material:
  record:
  - id: '12885'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Exploiting the lability of metal halide perovskites for doping semiconductor
  nanocomposites
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 6
year: '2021'
...
---
_id: '9119'
abstract:
- lang: eng
  text: 'We present DILS, a deployable statistical analysis platform for conducting
    demographic inferences with linked selection from population genomic data using
    an Approximate Bayesian Computation framework. DILS takes as input single‐population
    or two‐population data sets (multilocus fasta sequences) and performs three types
    of analyses in a hierarchical manner, identifying: (a) the best demographic model
    to study the importance of gene flow and population size change on the genetic
    patterns of polymorphism and divergence, (b) the best genomic model to determine
    whether the effective size Ne and migration rate N, m are heterogeneously distributed
    along the genome (implying linked selection) and (c) loci in genomic regions most
    associated with barriers to gene flow. Also available via a Web interface, an
    objective of DILS is to facilitate collaborative research in speciation genomics.
    Here, we show the performance and limitations of DILS by using simulations and
    finally apply the method to published data on a divergence continuum composed
    by 28 pairs of Mytilus mussel populations/species.'
article_processing_charge: No
article_type: original
author:
- first_name: Christelle
  full_name: Fraisse, Christelle
  id: 32DF5794-F248-11E8-B48F-1D18A9856A87
  last_name: Fraisse
  orcid: 0000-0001-8441-5075
- first_name: Iva
  full_name: Popovic, Iva
  last_name: Popovic
- first_name: Clément
  full_name: Mazoyer, Clément
  last_name: Mazoyer
- first_name: Bruno
  full_name: Spataro, Bruno
  last_name: Spataro
- first_name: Stéphane
  full_name: Delmotte, Stéphane
  last_name: Delmotte
- first_name: Jonathan
  full_name: Romiguier, Jonathan
  last_name: Romiguier
- first_name: Étienne
  full_name: Loire, Étienne
  last_name: Loire
- first_name: Alexis
  full_name: Simon, Alexis
  last_name: Simon
- first_name: Nicolas
  full_name: Galtier, Nicolas
  last_name: Galtier
- first_name: Laurent
  full_name: Duret, Laurent
  last_name: Duret
- first_name: Nicolas
  full_name: Bierne, Nicolas
  last_name: Bierne
- first_name: Xavier
  full_name: Vekemans, Xavier
  last_name: Vekemans
- first_name: Camille
  full_name: Roux, Camille
  last_name: Roux
citation:
  ama: 'Fraisse C, Popovic I, Mazoyer C, et al. DILS: Demographic inferences with
    linked selection by using ABC. <i>Molecular Ecology Resources</i>. 2021;21:2629-2644.
    doi:<a href="https://doi.org/10.1111/1755-0998.13323">10.1111/1755-0998.13323</a>'
  apa: 'Fraisse, C., Popovic, I., Mazoyer, C., Spataro, B., Delmotte, S., Romiguier,
    J., … Roux, C. (2021). DILS: Demographic inferences with linked selection by using
    ABC. <i>Molecular Ecology Resources</i>. Wiley. <a href="https://doi.org/10.1111/1755-0998.13323">https://doi.org/10.1111/1755-0998.13323</a>'
  chicago: 'Fraisse, Christelle, Iva Popovic, Clément Mazoyer, Bruno Spataro, Stéphane
    Delmotte, Jonathan Romiguier, Étienne Loire, et al. “DILS: Demographic Inferences
    with Linked Selection by Using ABC.” <i>Molecular Ecology Resources</i>. Wiley,
    2021. <a href="https://doi.org/10.1111/1755-0998.13323">https://doi.org/10.1111/1755-0998.13323</a>.'
  ieee: 'C. Fraisse <i>et al.</i>, “DILS: Demographic inferences with linked selection
    by using ABC,” <i>Molecular Ecology Resources</i>, vol. 21. Wiley, pp. 2629–2644,
    2021.'
  ista: 'Fraisse C, Popovic I, Mazoyer C, Spataro B, Delmotte S, Romiguier J, Loire
    É, Simon A, Galtier N, Duret L, Bierne N, Vekemans X, Roux C. 2021. DILS: Demographic
    inferences with linked selection by using ABC. Molecular Ecology Resources. 21,
    2629–2644.'
  mla: 'Fraisse, Christelle, et al. “DILS: Demographic Inferences with Linked Selection
    by Using ABC.” <i>Molecular Ecology Resources</i>, vol. 21, Wiley, 2021, pp. 2629–44,
    doi:<a href="https://doi.org/10.1111/1755-0998.13323">10.1111/1755-0998.13323</a>.'
  short: C. Fraisse, I. Popovic, C. Mazoyer, B. Spataro, S. Delmotte, J. Romiguier,
    É. Loire, A. Simon, N. Galtier, L. Duret, N. Bierne, X. Vekemans, C. Roux, Molecular
    Ecology Resources 21 (2021) 2629–2644.
date_created: 2021-02-14T23:01:14Z
date_published: 2021-01-15T00:00:00Z
date_updated: 2023-08-07T13:45:18Z
day: '15'
department:
- _id: NiBa
doi: 10.1111/1755-0998.13323
external_id:
  isi:
  - '000614183100001'
intvolume: '        21'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.biorxiv.org/content/10.1101/2020.06.15.151597v2
month: '01'
oa: 1
oa_version: Preprint
page: 2629-2644
publication: Molecular Ecology Resources
publication_identifier:
  eissn:
  - '17550998'
  issn:
  - 1755098X
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'DILS: Demographic inferences with linked selection by using ABC'
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 21
year: '2021'
...
---
_id: '9121'
abstract:
- lang: eng
  text: "We show that the energy gap for the BCS gap equation is\r\nΞ=μ(8e−2+o(1))exp(π2μ−−√a)\r\nin
    the low density limit μ→0. Together with the similar result for the critical temperature
    by Hainzl and Seiringer (Lett Math Phys 84: 99–107, 2008), this shows that, in
    the low density limit, the ratio of the energy gap and critical temperature is
    a universal constant independent of the interaction potential V. The results hold
    for a class of potentials with negative scattering length a and no bound states."
acknowledgement: "Most of this work was done as part of the author’s master’s thesis.
  The author would like to thank Jan Philip Solovej for his supervision of this process.\r\nOpen
  Access funding provided by Institute of Science and Technology (IST Austria)"
article_number: '20'
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Asbjørn Bækgaard
  full_name: Lauritsen, Asbjørn Bækgaard
  id: e1a2682f-dc8d-11ea-abe3-81da9ac728f1
  last_name: Lauritsen
  orcid: 0000-0003-4476-2288
citation:
  ama: Lauritsen AB. The BCS energy gap at low density. <i>Letters in Mathematical
    Physics</i>. 2021;111. doi:<a href="https://doi.org/10.1007/s11005-021-01358-5">10.1007/s11005-021-01358-5</a>
  apa: Lauritsen, A. B. (2021). The BCS energy gap at low density. <i>Letters in Mathematical
    Physics</i>. Springer Nature. <a href="https://doi.org/10.1007/s11005-021-01358-5">https://doi.org/10.1007/s11005-021-01358-5</a>
  chicago: Lauritsen, Asbjørn Bækgaard. “The BCS Energy Gap at Low Density.” <i>Letters
    in Mathematical Physics</i>. Springer Nature, 2021. <a href="https://doi.org/10.1007/s11005-021-01358-5">https://doi.org/10.1007/s11005-021-01358-5</a>.
  ieee: A. B. Lauritsen, “The BCS energy gap at low density,” <i>Letters in Mathematical
    Physics</i>, vol. 111. Springer Nature, 2021.
  ista: Lauritsen AB. 2021. The BCS energy gap at low density. Letters in Mathematical
    Physics. 111, 20.
  mla: Lauritsen, Asbjørn Bækgaard. “The BCS Energy Gap at Low Density.” <i>Letters
    in Mathematical Physics</i>, vol. 111, 20, Springer Nature, 2021, doi:<a href="https://doi.org/10.1007/s11005-021-01358-5">10.1007/s11005-021-01358-5</a>.
  short: A.B. Lauritsen, Letters in Mathematical Physics 111 (2021).
date_created: 2021-02-15T09:27:14Z
date_published: 2021-02-12T00:00:00Z
date_updated: 2023-09-05T15:17:16Z
day: '12'
ddc:
- '510'
department:
- _id: GradSch
doi: 10.1007/s11005-021-01358-5
external_id:
  isi:
  - '000617531900001'
file:
- access_level: open_access
  checksum: eaf1b3ff5026f120f0929a5c417dc842
  content_type: application/pdf
  creator: dernst
  date_created: 2021-02-15T09:31:07Z
  date_updated: 2021-02-15T09:31:07Z
  file_id: '9122'
  file_name: 2021_LettersMathPhysics_Lauritsen.pdf
  file_size: 329332
  relation: main_file
  success: 1
file_date_updated: 2021-02-15T09:31:07Z
has_accepted_license: '1'
intvolume: '       111'
isi: 1
keyword:
- Mathematical Physics
- Statistical and Nonlinear Physics
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
project:
- _id: B67AFEDC-15C9-11EA-A837-991A96BB2854
  name: IST Austria Open Access Fund
publication: Letters in Mathematical Physics
publication_identifier:
  eissn:
  - 1573-0530
  issn:
  - 0377-9017
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
status: public
title: The BCS energy gap at low density
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 111
year: '2021'
...
