Please note that LibreCat no longer supports Internet Explorer versions 8 or 9 (or earlier).
We recommend upgrading to the latest Internet Explorer, Google Chrome, or Firefox.
182 Publications
2020 | Published | Journal Article | IST-REx-ID: 8698 | 
Learning probabilistic neural representations with randomly connected circuits
O. Maoz, G. Tkačik, M.S. Esteki, R. Kiani, E. Schneidman, Proceedings of the National Academy of Sciences of the United States of America 117 (2020) 25066–25073.
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
O. Maoz, G. Tkačik, M.S. Esteki, R. Kiani, E. Schneidman, Proceedings of the National Academy of Sciences of the United States of America 117 (2020) 25066–25073.
2020 | Research Data | IST-REx-ID: 8930 |
Analysis scripts and research data for the paper "Minimal biophysical model of combined antibiotic action"
B. Kavcic, (2020).
[Published Version]
View
| Files available
| DOI
B. Kavcic, (2020).
2020 | Published | Journal Article | IST-REx-ID: 8955 |
Network physiology of cortico–muscular interactions
R. Rizzo, X. Zhang, J.W.J.L. Wang, F. Lombardi, P.C. Ivanov, Frontiers in Physiology 11 (2020).
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
R. Rizzo, X. Zhang, J.W.J.L. Wang, F. Lombardi, P.C. Ivanov, Frontiers in Physiology 11 (2020).
2020 | Published | Journal Article | IST-REx-ID: 9000 |
Nonequilibrium models of optimal enhancer function
R. Grah, B. Zoller, G. Tkačik, PNAS 117 (2020) 31614–31622.
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
R. Grah, B. Zoller, G. Tkačik, PNAS 117 (2020) 31614–31622.
2020 | Research Data | IST-REx-ID: 7383 |
Matlab scripts for the Paper: Gene Amplification as a Form of Population-Level Gene Expression regulation
R. Grah, (2020).
[Published Version]
View
| Files available
| DOI
R. Grah, (2020).
2020 | Published | Journal Article | IST-REx-ID: 7490 |
Evolutionarily unique mechanistic framework of clathrin-mediated endocytosis in plants
M. Narasimhan, A.J. Johnson, R. Prizak, W. Kaufmann, S. Tan, B.E. Casillas Perez, J. Friml, ELife 9 (2020).
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
M. Narasimhan, A.J. Johnson, R. Prizak, W. Kaufmann, S. Tan, B.E. Casillas Perez, J. Friml, ELife 9 (2020).
2020 | Research Data Reference | IST-REx-ID: 9776
Supporting information
R. Grah, T. Friedlander, (2020).
[Published Version]
View
| Files available
| DOI
R. Grah, T. Friedlander, (2020).
2020 | Research Data Reference | IST-REx-ID: 9777 |
Maximizing crosstalk
R. Grah, T. Friedlander, (2020).
View
| Files available
| DOI
| Download None (ext.)
R. Grah, T. Friedlander, (2020).
2020 | Research Data Reference | IST-REx-ID: 9779
Distribution of crosstalk values
R. Grah, T. Friedlander, (2020).
[Published Version]
View
| Files available
| DOI
R. Grah, T. Friedlander, (2020).
2019 | Published | Journal Article | IST-REx-ID: 5817 |
Limiting shapes of confined lipid vesicles
B. Kavcic, A. Sakashita, H. Noguchi, P. Ziherl, Soft Matter 15 (2019) 602–614.
[Submitted Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
B. Kavcic, A. Sakashita, H. Noguchi, P. Ziherl, Soft Matter 15 (2019) 602–614.
2019 | Published | Journal Article | IST-REx-ID: 5945 |
Optimal decoding of cellular identities in a genetic network
M.D. Petkova, G. Tkačik, W. Bialek, E.F. Wieschaus, T. Gregor, Cell 176 (2019) 844–855.e15.
[Published Version]
View
| Files available
| DOI
| Download Published Version (ext.)
| WoS
| PubMed | Europe PMC
M.D. Petkova, G. Tkačik, W. Bialek, E.F. Wieschaus, T. Gregor, Cell 176 (2019) 844–855.e15.
2019 | Submitted | Preprint | IST-REx-ID: 7552 |
Action at a distance in transcriptional regulation
W. Bialek, T. Gregor, G. Tkačik, ArXiv:1912.08579 (n.d.).
[Preprint]
View
| Download Preprint (ext.)
| arXiv
W. Bialek, T. Gregor, G. Tkačik, ArXiv:1912.08579 (n.d.).
2019 | Published | Conference Paper | IST-REx-ID: 7606 |
A tight upper bound on mutual information
M. Hledik, T.R. Sokolowski, G. Tkačik, in:, IEEE Information Theory Workshop, ITW 2019, IEEE, 2019.
[Preprint]
View
| Files available
| DOI
| Download Preprint (ext.)
| WoS
| arXiv
M. Hledik, T.R. Sokolowski, G. Tkačik, in:, IEEE Information Theory Workshop, ITW 2019, IEEE, 2019.
2019 | Published | Journal Article | IST-REx-ID: 6046 |
Temporal order and precision of complex stress responses in individual bacteria
K. Mitosch, G. Rieckh, M.T. Bollenbach, Molecular Systems Biology 15 (2019).
[Submitted Version]
View
| DOI
| Download Submitted Version (ext.)
| WoS
| PubMed | Europe PMC
K. Mitosch, G. Rieckh, M.T. Bollenbach, Molecular Systems Biology 15 (2019).
2019 | Published | Journal Article | IST-REx-ID: 6049 |
Feedback-induced self-oscillations in large interacting systems subjected to phase transitions
D. De Martino, Journal of Physics A: Mathematical and Theoretical 52 (2019).
[Published Version]
View
| Files available
| DOI
| WoS
D. De Martino, Journal of Physics A: Mathematical and Theoretical 52 (2019).
2019 | Published | Thesis | IST-REx-ID: 6071 |
Coevolution of transcription factors and their binding sites in sequence space
R. Prizak, Coevolution of Transcription Factors and Their Binding Sites in Sequence Space, Institute of Science and Technology Austria, 2019.
[Published Version]
View
| Files available
| DOI
R. Prizak, Coevolution of Transcription Factors and Their Binding Sites in Sequence Space, Institute of Science and Technology Austria, 2019.
2019 | Published | Journal Article | IST-REx-ID: 6090 |
Receptor crosstalk improves concentration sensing of multiple ligands
M. Carballo-Pacheco, J. Desponds, T. Gavrilchenko, A. Mayer, R. Prizak, G. Reddy, I. Nemenman, T. Mora, Physical Review E 99 (2019).
[Preprint]
View
| DOI
| Download Preprint (ext.)
| WoS
M. Carballo-Pacheco, J. Desponds, T. Gavrilchenko, A. Mayer, R. Prizak, G. Reddy, I. Nemenman, T. Mora, Physical Review E 99 (2019).
2019 | Published | Thesis | IST-REx-ID: 6473 |
Estimating information flow in single cells
S.A. Cepeda Humerez, Estimating Information Flow in Single Cells, Institute of Science and Technology Austria, 2019.
[Published Version]
View
| Files available
| DOI
S.A. Cepeda Humerez, Estimating Information Flow in Single Cells, Institute of Science and Technology Austria, 2019.
2019 | Published | Journal Article | IST-REx-ID: 6784 |
Molecular noise of innate immunity shapes bacteria-phage ecologies
J. Ruess, M. Pleska, C.C. Guet, G. Tkačik, PLoS Computational Biology 15 (2019).
[Published Version]
View
| Files available
| DOI
| WoS
J. Ruess, M. Pleska, C.C. Guet, G. Tkačik, PLoS Computational Biology 15 (2019).
2019 | Published | Journal Article | IST-REx-ID: 6900 |
Estimating information in time-varying signals
S.A. Cepeda Humerez, J. Ruess, G. Tkačik, PLoS Computational Biology 15 (2019) e1007290.
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
S.A. Cepeda Humerez, J. Ruess, G. Tkačik, PLoS Computational Biology 15 (2019) e1007290.