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Céline Camila Coraly Bräutigam

Bahti Zakirov

Anuj Patel

Gasper Tkacik

Ekaterina Maksimova

Krishnan Iyer

Athina Diakogianni

Reka Borbely

Julian Renaud

Puzhen Xia

Gábor Lengyel

Alexis Benichou

Simon Rella

Natalia Ruzickova

Sofia Backlund

Tetiana Rabiichuk

David Brückner

Cristina Savin

Georg Martius

Moritz Lang

Anna Andersson

Daniele De Martino

Sreyam Sengupta

Katarina Bodova

Matthew Chalk

Heloisa Chiossi

Remy Chait

Georg Rieckh

Bor Kavcic

Anna Levina (Martius)

Gabriel Mitchell

Tamar Friedlander

Sarah Cepeda Humerez

Thomas Sokolowski

Roshan Prizak

Jan Humplik

Michal Hledik

Vicent Botella Soler

Aditya Gilra

Mantas Gabrielaitis

Rok Grah

Jakob Ruess

Fabrizio Lombardi



174 Publications

2019 | Research Data Reference | IST-REx-ID: 9786
Supporting text and results
J. Ruess, M. Pleska, C.C. Guet, G. Tkačik, (2019).
[Published Version] View | Files available | DOI
 
2018 | Published | Journal Article | IST-REx-ID: 281 | OA
Distributed and dynamic intracellular organization of extracellular information
A. Granados, J. Pietsch, S.A. Cepeda Humerez, I. Farquhar, G. Tkačik, P. Swain, PNAS 115 (2018) 6088–6093.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | PubMed | Europe PMC
 
2018 | Published | Journal Article | IST-REx-ID: 292 | OA
Nonlinear decoding of a complex movie from the mammalian retina
V. Botella Soler, S. Deny, G.S. Martius, O. Marre, G. Tkačik, PLoS Computational Biology 14 (2018).
[Published Version] View | Files available | DOI | WoS
 
2018 | Published | Journal Article | IST-REx-ID: 305
Fabrication and operation of microfluidic hanging drop networks
P. Misun, A. Birchler, M. Lang, A. Hierlemann, O. Frey, Methods in Molecular Biology 1771 (2018) 183–202.
View | DOI
 
2018 | Published | Journal Article | IST-REx-ID: 306 | OA
An introduction to the maximum entropy approach and its application to inference problems in biology
A. De Martino, D. De Martino, Heliyon 4 (2018).
[Published Version] View | Files available | DOI
 
2018 | Published | Journal Article | IST-REx-ID: 31 | OA
Separating intrinsic interactions from extrinsic correlations in a network of sensory neurons
U. Ferrari, S. Deny, M.J. Chalk, G. Tkačik, O. Marre, T. Mora, Physical Review E 98 (2018).
[Preprint] View | DOI | Download Preprint (ext.) | WoS
 
2018 | Published | Journal Article | IST-REx-ID: 316 | OA
Evolutionary pathways for the generation of new self-incompatibility haplotypes in a non-self recognition system
K. Bodova, T. Priklopil, D. Field, N.H. Barton, M. Pickup, Genetics 209 (2018) 861–883.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS
 
2018 | Published | Journal Article | IST-REx-ID: 19 | OA
Nonoptimal gene expression creates latent potential for antibiotic resistance
A. Palmer, R.P. Chait, R. Kishony, Molecular Biology and Evolution 35 (2018) 2669–2684.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 
2018 | Published | Journal Article | IST-REx-ID: 67 | OA
Evolutionary potential of transcription factors for gene regulatory rewiring
C. Igler, M. Lagator, G. Tkačik, J.P. Bollback, C.C. Guet, Nature Ecology and Evolution 2 (2018) 1633–1643.
[Submitted Version] View | Files available | DOI | WoS
 
2018 | Published | Journal Article | IST-REx-ID: 457
Phage-host population dynamics promotes prophage acquisition in bacteria with innate immunity
M. Pleska, M. Lang, D. Refardt, B. Levin, C.C. Guet, Nature Ecology and Evolution 2 (2018) 359–366.
View | Files available | DOI | WoS
 
2018 | Published | Journal Article | IST-REx-ID: 543 | OA
Toward a unified theory of efficient, predictive, and sparse coding
M.J. Chalk, O. Marre, G. Tkačik, PNAS 115 (2018) 186–191.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 
2018 | Published | Journal Article | IST-REx-ID: 607 | OA
Well posedness and maximum entropy approximation for the dynamics of quantitative traits
K. Bodova, J. Haskovec, P. Markowich, Physica D: Nonlinear Phenomena 376–377 (2018) 108–120.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | arXiv
 
2018 | Published | Journal Article | IST-REx-ID: 161 | OA
Statistical mechanics for metabolic networks during steady state growth
D. De Martino, A.A. Mc, T. Bergmiller, C.C. Guet, G. Tkačik, Nature Communications 9 (2018).
[Published Version] View | Files available | DOI | WoS
 
2018 | Published | Journal Article | IST-REx-ID: 406 | OA
Probabilistic models of individual and collective animal behavior
K. Bod’Ová, G. Mitchell, R. Harpaz, E. Schneidman, G. Tkačik, PLoS One 13 (2018).
[Submitted Version] View | Files available | DOI | WoS
 
2018 | Research Data Reference | IST-REx-ID: 9813 | OA
Supplemental material for Bodova et al., 2018
K. Bodova, T. Priklopil, D. Field, N.H. Barton, M. Pickup, (2018).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
2018 | Research Data Reference | IST-REx-ID: 9831
Implementation of the inference method in Matlab
K. Bod’Ová, G. Mitchell, R. Harpaz, E. Schneidman, G. Tkačik, (2018).
[Published Version] View | Files available | DOI
 
2017 | Published | Journal Article | IST-REx-ID: 1104 | OA
Multiplexed computations in retinal ganglion cells of a single type
S. Deny, U. Ferrari, E. Mace, P. Yger, R. Caplette, S. Picaud, G. Tkačik, O. Marre, Nature Communications 8 (2017).
[Published Version] View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 823 | OA
Phase transitions in integer linear problems
S. Colabrese, D. De Martino, L. Leuzzi, E. Marinari, Journal of Statistical Mechanics: Theory and Experiment 2017 (2017).
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 2016 | OA
Exact goodness-of-fit testing for the Ising model
A. Martin Del Campo Sanchez, S.A. Cepeda Humerez, C. Uhler, Scandinavian Journal of Statistics 44 (2017) 285–306.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 
2017 | Published | Journal Article | IST-REx-ID: 665
Biased partitioning of the multidrug efflux pump AcrAB TolC underlies long lived phenotypic heterogeneity
T. Bergmiller, A.M. Andersson, K. Tomasek, E. Balleza, D. Kiviet, R. Hauschild, G. Tkačik, C.C. Guet, Science 356 (2017) 311–315.
View | Files available | DOI
 

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