---
_id: '4462'
abstract:
- lang: eng
  text: 'A major hurdle in the algorithmic verification and control of systems is
    the need to find suitable abstract models, which omit enough details to overcome
    the state-explosion problem, but retain enough details to exhibit satisfaction
    or controllability with respect to the specification. The paradigm of counterexample-guided
    abstraction refinement suggests a fully automatic way of finding suitable abstract
    models: one starts with a coarse abstraction, attempts to verify or control the
    abstract model, and if this attempt fails and the abstract counterexample does
    not correspond to a concrete counterexample, then one uses the spurious counterexample
    to guide the refinement of the abstract model. We present a counterexample-guided
    refinement algorithm for solving ω-regular control objectives. The main difficulty
    is that in control, unlike in verification, counterexamples are strategies in
    a game between system and controller. In the case that the controller has no choices,
    our scheme subsumes known counterexample-guided refinement algorithms for the
    verification of ω-regular specifications. Our algorithm is useful in all situations
    where ω-regular games need to be solved, such as supervisory control, sequential
    and program synthesis, and modular verification. The algorithm is fully symbolic,
    and therefore applicable also to infinite-state systems.'
acknowledgement: This research was supported in part by the DARPA SEC grant F33615-C-98-3614,
  the ONR grant N00014-02-1-0671, and the NSF grants CCR-9988172, CCR-0085949, and
  CCR-0225610.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Ranjit
  full_name: Jhala, Ranjit
  last_name: Jhala
- first_name: Ritankar
  full_name: Majumdar, Ritankar
  last_name: Majumdar
citation:
  ama: 'Henzinger TA, Jhala R, Majumdar R. Counterexample-guided control. In: <i>Proceedings
    of the 30th International Colloquium on Automata, Languages and Programming</i>.
    Vol 2719. Springer; 2003:886-902. doi:<a href="https://doi.org/10.1007/3-540-45061-0_69">10.1007/3-540-45061-0_69</a>'
  apa: 'Henzinger, T. A., Jhala, R., &#38; Majumdar, R. (2003). Counterexample-guided
    control. In <i>Proceedings of the 30th International Colloquium on Automata, Languages
    and Programming</i> (Vol. 2719, pp. 886–902). Eindhoven, The Netherlands: Springer.
    <a href="https://doi.org/10.1007/3-540-45061-0_69">https://doi.org/10.1007/3-540-45061-0_69</a>'
  chicago: Henzinger, Thomas A, Ranjit Jhala, and Ritankar Majumdar. “Counterexample-Guided
    Control.” In <i>Proceedings of the 30th International Colloquium on Automata,
    Languages and Programming</i>, 2719:886–902. Springer, 2003. <a href="https://doi.org/10.1007/3-540-45061-0_69">https://doi.org/10.1007/3-540-45061-0_69</a>.
  ieee: T. A. Henzinger, R. Jhala, and R. Majumdar, “Counterexample-guided control,”
    in <i>Proceedings of the 30th International Colloquium on Automata, Languages
    and Programming</i>, Eindhoven, The Netherlands, 2003, vol. 2719, pp. 886–902.
  ista: 'Henzinger TA, Jhala R, Majumdar R. 2003. Counterexample-guided control. Proceedings
    of the 30th International Colloquium on Automata, Languages and Programming. ICALP:
    Automata, Languages and Programming, LNCS, vol. 2719, 886–902.'
  mla: Henzinger, Thomas A., et al. “Counterexample-Guided Control.” <i>Proceedings
    of the 30th International Colloquium on Automata, Languages and Programming</i>,
    vol. 2719, Springer, 2003, pp. 886–902, doi:<a href="https://doi.org/10.1007/3-540-45061-0_69">10.1007/3-540-45061-0_69</a>.
  short: T.A. Henzinger, R. Jhala, R. Majumdar, in:, Proceedings of the 30th International
    Colloquium on Automata, Languages and Programming, Springer, 2003, pp. 886–902.
conference:
  end_date: 2003-07-04
  location: Eindhoven, The Netherlands
  name: 'ICALP: Automata, Languages and Programming'
  start_date: 2003-06-30
date_created: 2018-12-11T12:08:58Z
date_published: 2003-06-25T00:00:00Z
date_updated: 2024-01-10T11:19:41Z
day: '25'
doi: 10.1007/3-540-45061-0_69
extern: '1'
intvolume: '      2719'
language:
- iso: eng
month: '06'
oa_version: None
page: 886 - 902
publication: Proceedings of the 30th International Colloquium on Automata, Languages
  and Programming
publication_identifier:
  isbn:
  - '9783540404934'
publication_status: published
publisher: Springer
publist_id: '265'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Counterexample-guided control
type: conference
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
volume: 2719
year: '2003'
...
---
_id: '4463'
abstract:
- lang: eng
  text: We present an algorithm called TAR (“Thread-modular Abstraction Refinement”)
    for model checking safety properties of concurrent software. The TAR algorithm
    uses thread-modular assume-guarantee reasoning to overcome the exponential complexity
    in the control state of multithreaded programs. Thread modularity means that TAR
    explores the state space of one thread at a time, making assumptions about how
    the environment can interfere. The TAR algorithm uses counterexample-guided predicate-abstraction
    refinement to overcome the usually infinite complexity in the data state of C
    programs. A successive approximation scheme automatically infers the necessary
    precision on data variables as well as suitable environment assumptions. The scheme
    is novel in that transition relations are approximated from above, while at the
    same time environment assumptions are approximated from below. In our software
    verification tool BLAST we have implemented a fully automatic race checker for
    multithreaded C programs which is based on the TAR algorithm. This tool has verified
    a wide variety of commonly used locking idioms, including locking schemes that
    are not amenable to existing dynamic and static race checkers such as ERASER or
    WARLOCK.
acknowledgement: This work was supported in part by the NSF grants CCR-0085949 and
  CCR-0234690, the DARPA grant F33615-00-C-1693, and the MARCO grant 98-DT-660.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Ranjit
  full_name: Jhala, Ranjit
  last_name: Jhala
- first_name: Ritankar
  full_name: Majumdar, Ritankar
  last_name: Majumdar
- first_name: Shaz
  full_name: Qadeer, Shaz
  last_name: Qadeer
citation:
  ama: 'Henzinger TA, Jhala R, Majumdar R, Qadeer S. Thread-modular abstraction refinement.
    In: <i>Proceedings of the 15th International Conference on Computer Aided Verification</i>.
    Vol 2725. Springer; 2003:262-274. doi:<a href="https://doi.org/10.1007/978-3-540-45069-6_27">10.1007/978-3-540-45069-6_27</a>'
  apa: 'Henzinger, T. A., Jhala, R., Majumdar, R., &#38; Qadeer, S. (2003). Thread-modular
    abstraction refinement. In <i>Proceedings of the 15th International Conference
    on Computer Aided Verification</i> (Vol. 2725, pp. 262–274). Boulder, CO, USA:
    Springer. <a href="https://doi.org/10.1007/978-3-540-45069-6_27">https://doi.org/10.1007/978-3-540-45069-6_27</a>'
  chicago: Henzinger, Thomas A, Ranjit Jhala, Ritankar Majumdar, and Shaz Qadeer.
    “Thread-Modular Abstraction Refinement.” In <i>Proceedings of the 15th International
    Conference on Computer Aided Verification</i>, 2725:262–74. Springer, 2003. <a
    href="https://doi.org/10.1007/978-3-540-45069-6_27">https://doi.org/10.1007/978-3-540-45069-6_27</a>.
  ieee: T. A. Henzinger, R. Jhala, R. Majumdar, and S. Qadeer, “Thread-modular abstraction
    refinement,” in <i>Proceedings of the 15th International Conference on Computer
    Aided Verification</i>, Boulder, CO, USA, 2003, vol. 2725, pp. 262–274.
  ista: 'Henzinger TA, Jhala R, Majumdar R, Qadeer S. 2003. Thread-modular abstraction
    refinement. Proceedings of the 15th International Conference on Computer Aided
    Verification. CAV: Computer Aided Verification, LNCS, vol. 2725, 262–274.'
  mla: Henzinger, Thomas A., et al. “Thread-Modular Abstraction Refinement.” <i>Proceedings
    of the 15th International Conference on Computer Aided Verification</i>, vol.
    2725, Springer, 2003, pp. 262–74, doi:<a href="https://doi.org/10.1007/978-3-540-45069-6_27">10.1007/978-3-540-45069-6_27</a>.
  short: T.A. Henzinger, R. Jhala, R. Majumdar, S. Qadeer, in:, Proceedings of the
    15th International Conference on Computer Aided Verification, Springer, 2003,
    pp. 262–274.
conference:
  end_date: 2003-07-12
  location: Boulder, CO, USA
  name: 'CAV: Computer Aided Verification'
  start_date: 2003-07-08
date_created: 2018-12-11T12:08:59Z
date_published: 2003-06-27T00:00:00Z
date_updated: 2024-01-10T11:05:53Z
day: '27'
doi: 10.1007/978-3-540-45069-6_27
extern: '1'
intvolume: '      2725'
language:
- iso: eng
month: '06'
oa_version: None
page: 262 - 274
publication: Proceedings of the 15th International Conference on Computer Aided Verification
publication_identifier:
  isbn:
  - '9783540405245'
publication_status: published
publisher: Springer
publist_id: '266'
quality_controlled: '1'
status: public
title: Thread-modular abstraction refinement
type: conference
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
volume: 2725
year: '2003'
...
---
_id: '4464'
abstract:
- lang: eng
  text: We introduce the paradigm of schedule-carrying code (SCC). A hard real-time
    program can be executed on a given platform only if there exists a feasible schedule
    for the real-time tasks of the program. Traditionally, a scheduler determines
    the existence of a feasible schedule according to some scheduling strategy. With
    SCC, a compiler proves the existence of a feasible schedule by generating executable
    code that is attached to the program and represents its schedule. An SCC executable
    is a real-time program that carries its schedule as code, which is produced once
    and can be revalidated and executed with each use. We evaluate SCC both in theory
    and practice. In theory, we give two scenarios, of nonpreemptive and distributed
    scheduling for Giotto programs, where the generation of a feasible schedule is
    hard, while the validation of scheduling instructions that are attached to the
    programs is easy. In practice, we implement SCC and show that explicit scheduling
    instructions can reduce the scheduling overhead up to 35% and can provide an efficient,
    flexible, and verifiable means for compiling Giotto programs on complex architectures,
    such as the TTA.
acknowledgement: This work was supported by the AFOSR MURI grant F49620-00-1-0327,
  the California MICRO grant 01-037, the DARPA grant F33615-C-98-3614, the MARCO grant
  98-DT-660, and the NSF grants CCR-0208875, CCR-0085949, and CCR-0225610.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Christoph
  full_name: Kirsch, Christoph
  last_name: Kirsch
- first_name: Slobodan
  full_name: Matic, Slobodan
  last_name: Matic
citation:
  ama: 'Henzinger TA, Kirsch C, Matic S. Schedule-carrying code. In: <i>Proceedings
    of the 3rd International Conference on Embedded Software</i>. Vol 2855. ACM; 2003:241-256.
    doi:<a href="https://doi.org/10.1007/978-3-540-45212-6_16">10.1007/978-3-540-45212-6_16</a>'
  apa: 'Henzinger, T. A., Kirsch, C., &#38; Matic, S. (2003). Schedule-carrying code.
    In <i>Proceedings of the 3rd International Conference on Embedded Software</i>
    (Vol. 2855, pp. 241–256). Philadelphia, PA, USA: ACM. <a href="https://doi.org/10.1007/978-3-540-45212-6_16">https://doi.org/10.1007/978-3-540-45212-6_16</a>'
  chicago: Henzinger, Thomas A, Christoph Kirsch, and Slobodan Matic. “Schedule-Carrying
    Code.” In <i>Proceedings of the 3rd International Conference on Embedded Software</i>,
    2855:241–56. ACM, 2003. <a href="https://doi.org/10.1007/978-3-540-45212-6_16">https://doi.org/10.1007/978-3-540-45212-6_16</a>.
  ieee: T. A. Henzinger, C. Kirsch, and S. Matic, “Schedule-carrying code,” in <i>Proceedings
    of the 3rd International Conference on Embedded Software</i>, Philadelphia, PA,
    USA, 2003, vol. 2855, pp. 241–256.
  ista: 'Henzinger TA, Kirsch C, Matic S. 2003. Schedule-carrying code. Proceedings
    of the 3rd International Conference on Embedded Software. EMSOFT: Embedded Software
    , LNCS, vol. 2855, 241–256.'
  mla: Henzinger, Thomas A., et al. “Schedule-Carrying Code.” <i>Proceedings of the
    3rd International Conference on Embedded Software</i>, vol. 2855, ACM, 2003, pp.
    241–56, doi:<a href="https://doi.org/10.1007/978-3-540-45212-6_16">10.1007/978-3-540-45212-6_16</a>.
  short: T.A. Henzinger, C. Kirsch, S. Matic, in:, Proceedings of the 3rd International
    Conference on Embedded Software, ACM, 2003, pp. 241–256.
conference:
  end_date: 2003-10-15
  location: Philadelphia, PA, USA
  name: 'EMSOFT: Embedded Software '
  start_date: 2003-10-13
date_created: 2018-12-11T12:08:59Z
date_published: 2003-09-29T00:00:00Z
date_updated: 2024-01-10T11:33:57Z
day: '29'
doi: 10.1007/978-3-540-45212-6_16
extern: '1'
intvolume: '      2855'
language:
- iso: eng
month: '09'
oa_version: None
page: 241 - 256
publication: Proceedings of the 3rd International Conference on Embedded Software
publication_identifier:
  isbn:
  - '9783540202233'
publication_status: published
publisher: ACM
publist_id: '267'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Schedule-carrying code
type: conference
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
volume: 2855
year: '2003'
...
---
_id: '4465'
abstract:
- lang: eng
  text: Giotto is a principled, tool-supported design methodology for implementing
    embedded control systems on platforms of possibly distributed sensors, actuators,
    CPUs, and networks. Giotto is based on the principle that time-triggered task
    invocations plus time-triggered mode switches can form the abstract essence of
    programming real-time control systems. Giotto consists of a programming language
    with a formal semantics, and a retargetable compiler and runtime library. Giotto
    supports the automation of control system design by strictly separating platform-independent
    functionality and timing concerns from platform-dependent scheduling and communication
    issues. The time-triggered predictability of Giotto makes it particularly suitable
    for safety-critical applications with hard real-time constraints. We illustrate
    the platform independence and time-triggered execution of Giotto by coordinating
    a heterogeneous flock of Intel x86 robots and Lego Mindstorms robots.
article_processing_charge: No
author:
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Benjamin
  full_name: Horowitz, Benjamin
  last_name: Horowitz
- first_name: Christoph
  full_name: Kirsch, Christoph
  last_name: Kirsch
citation:
  ama: 'Henzinger TA, Horowitz B, Kirsch C. Embedded control systems development with
    Giotto. In: <i>Software-Enabled Control: Information Technology for Dynamical
    Systems</i>. Wiley-Blackwell; 2003:123-146. doi:<a href="https://doi.org/10.1002/047172288X.ch8">10.1002/047172288X.ch8</a>'
  apa: 'Henzinger, T. A., Horowitz, B., &#38; Kirsch, C. (2003). Embedded control
    systems development with Giotto. In <i>Software-Enabled Control: Information Technology
    for Dynamical Systems</i> (pp. 123–146). Wiley-Blackwell. <a href="https://doi.org/10.1002/047172288X.ch8">https://doi.org/10.1002/047172288X.ch8</a>'
  chicago: 'Henzinger, Thomas A, Benjamin Horowitz, and Christoph Kirsch. “Embedded
    Control Systems Development with Giotto.” In <i>Software-Enabled Control: Information
    Technology for Dynamical Systems</i>, 123–46. Wiley-Blackwell, 2003. <a href="https://doi.org/10.1002/047172288X.ch8">https://doi.org/10.1002/047172288X.ch8</a>.'
  ieee: 'T. A. Henzinger, B. Horowitz, and C. Kirsch, “Embedded control systems development
    with Giotto,” in <i>Software-Enabled Control: Information Technology for Dynamical
    Systems</i>, Wiley-Blackwell, 2003, pp. 123–146.'
  ista: 'Henzinger TA, Horowitz B, Kirsch C. 2003.Embedded control systems development
    with Giotto. In: Software-Enabled Control: Information Technology for Dynamical
    Systems. , 123–146.'
  mla: 'Henzinger, Thomas A., et al. “Embedded Control Systems Development with Giotto.”
    <i>Software-Enabled Control: Information Technology for Dynamical Systems</i>,
    Wiley-Blackwell, 2003, pp. 123–46, doi:<a href="https://doi.org/10.1002/047172288X.ch8">10.1002/047172288X.ch8</a>.'
  short: 'T.A. Henzinger, B. Horowitz, C. Kirsch, in:, Software-Enabled Control: Information
    Technology for Dynamical Systems, Wiley-Blackwell, 2003, pp. 123–146.'
date_created: 2018-12-11T12:08:59Z
date_published: 2003-05-20T00:00:00Z
date_updated: 2024-01-08T12:24:01Z
day: '20'
doi: 10.1002/047172288X.ch8
extern: '1'
language:
- iso: eng
month: '05'
oa_version: None
page: 123 - 146
publication: 'Software-Enabled Control: Information Technology for Dynamical Systems'
publication_identifier:
  isbn:
  - '9780471234364 '
publication_status: published
publisher: Wiley-Blackwell
publist_id: '262'
quality_controlled: '1'
status: public
title: Embedded control systems development with Giotto
type: book_chapter
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
year: '2003'
...
---
_id: '4466'
abstract:
- lang: eng
  text: One source of complexity in the μ-calculus is its ability to specify an unbounded
    number of switches between universal (AX) and existential (EX) branching modes.
    We therefore study the problems of satisfiability, validity, model checking, and
    implication for the universal and existential fragments of the μ-calculus, in
    which only one branching mode is allowed. The universal fragment is rich enough
    to express most specifications of interest, and therefore improved algorithms
    are of practical importance. We show that while the satisfiability and validity
    problems become indeed simpler for the existential and universal fragments, this
    is, unfortunately, not the case for model checking and implication. We also show
    the corresponding results for the alternationfree fragment of the μ-calculus,
    where no alternations between least and greatest fixed points are allowed. Our
    results imply that efforts to find a polynomial-time model-checking algorithm
    for the μ-calculus can be replaced by efforts to find such an algorithm for the
    universal or existential fragment.
acknowledgement: This work was supported in part by NSF grant CCR-9988172, the AFOSR
  MURI grant F49620-00-1-0327, and a Microsoft Research Fellowship.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Orna
  full_name: Kupferman, Orna
  last_name: Kupferman
- first_name: Ritankar
  full_name: Majumdar, Ritankar
  last_name: Majumdar
citation:
  ama: 'Henzinger TA, Kupferman O, Majumdar R. On the universal and existential fragments
    of the mu-calculus. In: <i>Proceedings of the 9th International Conference on
    Tools and Algorithms for the Construction and Analysis of Systems </i>. Vol 2619.
    Springer; 2003:49-64. doi:<a href="https://doi.org/10.1007/3-540-36577-X_5">10.1007/3-540-36577-X_5</a>'
  apa: 'Henzinger, T. A., Kupferman, O., &#38; Majumdar, R. (2003). On the universal
    and existential fragments of the mu-calculus. In <i>Proceedings of the 9th International
    Conference on Tools and Algorithms for the Construction and Analysis of Systems
    </i> (Vol. 2619, pp. 49–64). Warsaw, Poland: Springer. <a href="https://doi.org/10.1007/3-540-36577-X_5">https://doi.org/10.1007/3-540-36577-X_5</a>'
  chicago: Henzinger, Thomas A, Orna Kupferman, and Ritankar Majumdar. “On the Universal
    and Existential Fragments of the Mu-Calculus.” In <i>Proceedings of the 9th International
    Conference on Tools and Algorithms for the Construction and Analysis of Systems
    </i>, 2619:49–64. Springer, 2003. <a href="https://doi.org/10.1007/3-540-36577-X_5">https://doi.org/10.1007/3-540-36577-X_5</a>.
  ieee: T. A. Henzinger, O. Kupferman, and R. Majumdar, “On the universal and existential
    fragments of the mu-calculus,” in <i>Proceedings of the 9th International Conference
    on Tools and Algorithms for the Construction and Analysis of Systems </i>, Warsaw,
    Poland, 2003, vol. 2619, pp. 49–64.
  ista: 'Henzinger TA, Kupferman O, Majumdar R. 2003. On the universal and existential
    fragments of the mu-calculus. Proceedings of the 9th International Conference
    on Tools and Algorithms for the Construction and Analysis of Systems . TACAS:
    Tools and Algorithms for the Construction and Analysis of Systems, LNCS, vol.
    2619, 49–64.'
  mla: Henzinger, Thomas A., et al. “On the Universal and Existential Fragments of
    the Mu-Calculus.” <i>Proceedings of the 9th International Conference on Tools
    and Algorithms for the Construction and Analysis of Systems </i>, vol. 2619, Springer,
    2003, pp. 49–64, doi:<a href="https://doi.org/10.1007/3-540-36577-X_5">10.1007/3-540-36577-X_5</a>.
  short: T.A. Henzinger, O. Kupferman, R. Majumdar, in:, Proceedings of the 9th International
    Conference on Tools and Algorithms for the Construction and Analysis of Systems
    , Springer, 2003, pp. 49–64.
conference:
  end_date: 2003-04-11
  location: Warsaw, Poland
  name: 'TACAS: Tools and Algorithms for the Construction and Analysis of Systems'
  start_date: 2003-04-07
date_created: 2018-12-11T12:08:59Z
date_published: 2003-03-14T00:00:00Z
date_updated: 2024-01-08T13:17:35Z
day: '14'
doi: 10.1007/3-540-36577-X_5
extern: '1'
intvolume: '      2619'
language:
- iso: eng
month: '03'
oa_version: None
page: 49 - 64
publication: 'Proceedings of the 9th International Conference on Tools and Algorithms
  for the Construction and Analysis of Systems '
publication_identifier:
  isbn:
  - '9783540008989'
publication_status: published
publisher: Springer
publist_id: '263'
quality_controlled: '1'
status: public
title: On the universal and existential fragments of the mu-calculus
type: conference
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
volume: 2619
year: '2003'
...
---
_id: '4467'
abstract:
- lang: eng
  text: 'BLAST (the Berkeley Lazy Abstraction Software verification Tool) is a verification
    system for checking safety properties of C programs using automatic property-driven
    construction and model checking of software abstractions. Blast implements an
    abstract-model check-refine loop to check for reachability of a specified label
    in the program. The abstract model is built on the fly using predicate abstraction.
    This model is then checked for reachability. If there is no (abstract) path to
    the specified error label, Blast reports that the system is safe and produces
    a succinct proof. Otherwise, it checks if the path is feasible using symbolic
    execution of the program. If the path is feasible, Blast outputs the path as an
    error trace, otherwise, it uses the infeasibility of the path to refine the abstract
    model. Blast short-circuits the loop from abstraction to verification to refinement,
    integrating the three steps tightly through “lazy abstraction” [5]. This integration
    can offer significant advantages in performance by avoiding the repetition of
    work from one iteration of the loop to the next. '
acknowledgement: This work was supported in part by the NSF grants CCR-0085949 and
  CCR-9988172, the DARPA PCES grant F33615-00-C-1693, the MARCO GSRC grant 98-DT-660,
  and a Microsoft Research Fellowship.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Ranjit
  full_name: Jhala, Ranjit
  last_name: Jhala
- first_name: Ritankar
  full_name: Majumdar, Ritankar
  last_name: Majumdar
- first_name: Grégoire
  full_name: Sutre, Grégoire
  last_name: Sutre
citation:
  ama: 'Henzinger TA, Jhala R, Majumdar R, Sutre G. Software verification with BLAST.
    In: <i>Proceedings of the 10th International SPIN Workshop </i>. Vol 2648. Springer;
    2003:235-239. doi:<a href="https://doi.org/10.1007/3-540-44829-2_17">10.1007/3-540-44829-2_17</a>'
  apa: 'Henzinger, T. A., Jhala, R., Majumdar, R., &#38; Sutre, G. (2003). Software
    verification with BLAST. In <i>Proceedings of the 10th International SPIN Workshop
    </i> (Vol. 2648, pp. 235–239). Portland, OR, USA: Springer. <a href="https://doi.org/10.1007/3-540-44829-2_17">https://doi.org/10.1007/3-540-44829-2_17</a>'
  chicago: Henzinger, Thomas A, Ranjit Jhala, Ritankar Majumdar, and Grégoire Sutre.
    “Software Verification with BLAST.” In <i>Proceedings of the 10th International
    SPIN Workshop </i>, 2648:235–39. Springer, 2003. <a href="https://doi.org/10.1007/3-540-44829-2_17">https://doi.org/10.1007/3-540-44829-2_17</a>.
  ieee: T. A. Henzinger, R. Jhala, R. Majumdar, and G. Sutre, “Software verification
    with BLAST,” in <i>Proceedings of the 10th International SPIN Workshop </i>, Portland,
    OR, USA, 2003, vol. 2648, pp. 235–239.
  ista: 'Henzinger TA, Jhala R, Majumdar R, Sutre G. 2003. Software verification with
    BLAST. Proceedings of the 10th International SPIN Workshop . SPIN: Model Checking
    Software, LNCS, vol. 2648, 235–239.'
  mla: Henzinger, Thomas A., et al. “Software Verification with BLAST.” <i>Proceedings
    of the 10th International SPIN Workshop </i>, vol. 2648, Springer, 2003, pp. 235–39,
    doi:<a href="https://doi.org/10.1007/3-540-44829-2_17">10.1007/3-540-44829-2_17</a>.
  short: T.A. Henzinger, R. Jhala, R. Majumdar, G. Sutre, in:, Proceedings of the
    10th International SPIN Workshop , Springer, 2003, pp. 235–239.
conference:
  end_date: 2003-05-10
  location: Portland, OR, USA
  name: 'SPIN: Model Checking Software'
  start_date: 2003-05-09
date_created: 2018-12-11T12:09:00Z
date_published: 2003-04-28T00:00:00Z
date_updated: 2024-01-08T14:05:29Z
day: '28'
doi: 10.1007/3-540-44829-2_17
extern: '1'
intvolume: '      2648'
language:
- iso: eng
month: '04'
oa_version: None
page: 235 - 239
publication: 'Proceedings of the 10th International SPIN Workshop '
publication_identifier:
  isbn:
  - '9783540401179'
publication_status: published
publisher: Springer
publist_id: '264'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Software verification with BLAST
type: conference
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
volume: 2648
year: '2003'
...
---
_id: '4468'
abstract:
- lang: eng
  text: Giotto is a high-level programming language for time-triggered control applications.
    The authors begin with a conceptual overview of its methodology, discuss the Giotto
    helicopter project, and summarize available Giotto implementations.
acknowledgement: We thank Niklaus Wirth and Walter Schaufelberger for their advice
  and support of the reengineering effort of the ETH Zurich helicopter control system
  using Giotto. This research was supported in part by DARPA SEC grant F33615-C-98–3614,
  MARCO GSRC grant 98-DT-660, and AFOSR MURI grant F49620–00-1–0327. A preliminary
  version of this article appeared as [1].
article_processing_charge: No
article_type: original
author:
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Christoph
  full_name: Kirsch, Christoph
  last_name: Kirsch
- first_name: Marco
  full_name: Sanvido, Marco
  last_name: Sanvido
- first_name: Wolfgang
  full_name: Pree, Wolfgang
  last_name: Pree
citation:
  ama: Henzinger TA, Kirsch C, Sanvido M, Pree W. From control models to real-time
    code using Giotto. <i>IEEE Control Systems Magazine</i>. 2003;23(1):50-64. doi:<a
    href="https://doi.org/10.1109/MCS.2003.1172829">10.1109/MCS.2003.1172829</a>
  apa: Henzinger, T. A., Kirsch, C., Sanvido, M., &#38; Pree, W. (2003). From control
    models to real-time code using Giotto. <i>IEEE Control Systems Magazine</i>. IEEE.
    <a href="https://doi.org/10.1109/MCS.2003.1172829">https://doi.org/10.1109/MCS.2003.1172829</a>
  chicago: Henzinger, Thomas A, Christoph Kirsch, Marco Sanvido, and Wolfgang Pree.
    “From Control Models to Real-Time Code Using Giotto.” <i>IEEE Control Systems
    Magazine</i>. IEEE, 2003. <a href="https://doi.org/10.1109/MCS.2003.1172829">https://doi.org/10.1109/MCS.2003.1172829</a>.
  ieee: T. A. Henzinger, C. Kirsch, M. Sanvido, and W. Pree, “From control models
    to real-time code using Giotto,” <i>IEEE Control Systems Magazine</i>, vol. 23,
    no. 1. IEEE, pp. 50–64, 2003.
  ista: Henzinger TA, Kirsch C, Sanvido M, Pree W. 2003. From control models to real-time
    code using Giotto. IEEE Control Systems Magazine. 23(1), 50–64.
  mla: Henzinger, Thomas A., et al. “From Control Models to Real-Time Code Using Giotto.”
    <i>IEEE Control Systems Magazine</i>, vol. 23, no. 1, IEEE, 2003, pp. 50–64, doi:<a
    href="https://doi.org/10.1109/MCS.2003.1172829">10.1109/MCS.2003.1172829</a>.
  short: T.A. Henzinger, C. Kirsch, M. Sanvido, W. Pree, IEEE Control Systems Magazine
    23 (2003) 50–64.
date_created: 2018-12-11T12:09:00Z
date_published: 2003-01-29T00:00:00Z
date_updated: 2024-01-08T10:54:53Z
day: '29'
doi: 10.1109/MCS.2003.1172829
extern: '1'
intvolume: '        23'
issue: '1'
language:
- iso: eng
month: '01'
oa_version: None
page: 50 - 64
publication: IEEE Control Systems Magazine
publication_identifier:
  issn:
  - '1066-033X '
publication_status: published
publisher: IEEE
publist_id: '260'
quality_controlled: '1'
scopus_import: '1'
status: public
title: From control models to real-time code using Giotto
type: journal_article
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
volume: 23
year: '2003'
...
---
_id: '4469'
abstract:
- lang: eng
  text: Giotto provides an abstract programmer's model for the implementation of embedded
    control systems with hard real-time constraints. A typical control application
    consists of periodic software tasks together with a mode-switching logic for enabling
    and disabling tasks. Giotto specifies time-triggered sensor readings, task invocations,
    actuator updates, and mode switches independent of any implementation platform.
    Giotto can be annotated with platform constraints such as task-to-host mappings,
    and task and communication schedules. The annotations are directives for the Giotto
    compiler, but they do not alter the functionality and timing of a Giotto program.
    By separating the platform-independent from the platform-dependent concerns, Giotto
    enables a great deal of flexibility in choosing control platforms as well as a
    great deal of automation in the validation and synthesis of control software.
    The time-triggered nature of Giotto achieves timing predictability, which makes
    Giotto particularly suitable for safety-critical applications.
acknowledgement: The authors would like to thank R. Majumdar for implementing a prototype
  Giotto compiler for Lego Mindstorms robots. They would like to thank D. Derevyanko
  and W. Williams for building the Intel x86 robots; and E. Lee and X. Liu for help
  with implementing Giotto as a “model of computation” in Ptolemy II [26]. Finally,
  they would also like to thank M. Sanvido for his suggestions on the design of the
  Giotto drivers; and P. Griffiths for implementing the functionality code of the
  electronic throttle controller.
article_processing_charge: No
article_type: original
author:
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Benjamin
  full_name: Horowitz, Benjamin
  last_name: Horowitz
- first_name: Christoph
  full_name: Kirsch, Christoph
  last_name: Kirsch
citation:
  ama: 'Henzinger TA, Horowitz B, Kirsch C. Giotto: A time-triggered language for
    embedded programming. <i>Proceedings of the IEEE</i>. 2003;91(1):84-99. doi:<a
    href="https://doi.org/10.1109/JPROC.2002.805825">10.1109/JPROC.2002.805825</a>'
  apa: 'Henzinger, T. A., Horowitz, B., &#38; Kirsch, C. (2003). Giotto: A time-triggered
    language for embedded programming. <i>Proceedings of the IEEE</i>. IEEE. <a href="https://doi.org/10.1109/JPROC.2002.805825">https://doi.org/10.1109/JPROC.2002.805825</a>'
  chicago: 'Henzinger, Thomas A, Benjamin Horowitz, and Christoph Kirsch. “Giotto:
    A Time-Triggered Language for Embedded Programming.” <i>Proceedings of the IEEE</i>.
    IEEE, 2003. <a href="https://doi.org/10.1109/JPROC.2002.805825">https://doi.org/10.1109/JPROC.2002.805825</a>.'
  ieee: 'T. A. Henzinger, B. Horowitz, and C. Kirsch, “Giotto: A time-triggered language
    for embedded programming,” <i>Proceedings of the IEEE</i>, vol. 91, no. 1. IEEE,
    pp. 84–99, 2003.'
  ista: 'Henzinger TA, Horowitz B, Kirsch C. 2003. Giotto: A time-triggered language
    for embedded programming. Proceedings of the IEEE. 91(1), 84–99.'
  mla: 'Henzinger, Thomas A., et al. “Giotto: A Time-Triggered Language for Embedded
    Programming.” <i>Proceedings of the IEEE</i>, vol. 91, no. 1, IEEE, 2003, pp.
    84–99, doi:<a href="https://doi.org/10.1109/JPROC.2002.805825">10.1109/JPROC.2002.805825</a>.'
  short: T.A. Henzinger, B. Horowitz, C. Kirsch, Proceedings of the IEEE 91 (2003)
    84–99.
date_created: 2018-12-11T12:09:00Z
date_published: 2003-01-29T00:00:00Z
date_updated: 2024-01-10T11:55:18Z
day: '29'
doi: 10.1109/JPROC.2002.805825
extern: '1'
intvolume: '        91'
issue: '1'
language:
- iso: eng
month: '01'
oa_version: None
page: 84 - 99
publication: Proceedings of the IEEE
publication_identifier:
  issn:
  - '0018-9219 '
publication_status: published
publisher: IEEE
publist_id: '261'
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Giotto: A time-triggered language for embedded programming'
type: journal_article
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
volume: 91
year: '2003'
...
---
_id: '4561'
abstract:
- lang: eng
  text: 'We present a formalism for specifying component interfaces that expose component
    requirements on limited resources. The formalism permits an algorithmic check
    if two or more components, when put together, exceed the available resources.
    Moreover, the formalism can be used to compute the quantity of resources necessary
    for satisfying the requirements of a collection of components. The formalism can
    be instantiated in several ways. For example, several components may draw power
    from the same source. Then, the formalism supports compatibility checks such as:
    can two components, when put together, achieve their tasks without ever exceeding
    the available amount of peak power? or, can they achieve their tasks by using
    no more than the initially available amount of energy (i.e., power accumulated
    over time)? The corresponding quantitative questions that our algorithms answer
    are the following: what is the amount of peak power needed for two components
    to be put together? what is the corresponding amount of initial energy? To solve
    these questions, we model interfaces with resource requirements as games with
    quantitative objectives. The games are played on state spaces where each state
    is labeled by a number (representing, e.g., power consumption), and a play produces
    an infinite path of labels. The objective may be, for example, to minimize the
    largest label that occurs during a play. We illustrate our approach by modeling
    compatibility questions for the components of robot control software, and of wireless
    sensor networks.'
acknowledgement: This research was supported in part by the DARPA grant F33615-00-C-1693,
  the MARCO grant 98-DT-660, the ONR grant N00014-02-1-0671, and the NSF grants CCR-0085949,
  CCR-0132780, CCR-0234690, and CCR-9988172.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Arindam
  full_name: Chakrabarti, Arindam
  last_name: Chakrabarti
- first_name: Luca
  full_name: De Alfaro, Luca
  last_name: De Alfaro
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Mariëlle
  full_name: Stoelinga, Mariëlle
  last_name: Stoelinga
citation:
  ama: 'Chakrabarti A, De Alfaro L, Henzinger TA, Stoelinga M. Resource interfaces.
    In: <i>Third International Conference on Embedded Software</i>. Vol 2855. ACM;
    2003:117-133. doi:<a href="https://doi.org/10.1007/978-3-540-45212-6_9">10.1007/978-3-540-45212-6_9</a>'
  apa: 'Chakrabarti, A., De Alfaro, L., Henzinger, T. A., &#38; Stoelinga, M. (2003).
    Resource interfaces. In <i>Third International Conference on Embedded Software</i>
    (Vol. 2855, pp. 117–133). Philadelphia, PA, USA: ACM. <a href="https://doi.org/10.1007/978-3-540-45212-6_9">https://doi.org/10.1007/978-3-540-45212-6_9</a>'
  chicago: Chakrabarti, Arindam, Luca De Alfaro, Thomas A Henzinger, and Mariëlle
    Stoelinga. “Resource Interfaces.” In <i>Third International Conference on Embedded
    Software</i>, 2855:117–33. ACM, 2003. <a href="https://doi.org/10.1007/978-3-540-45212-6_9">https://doi.org/10.1007/978-3-540-45212-6_9</a>.
  ieee: A. Chakrabarti, L. De Alfaro, T. A. Henzinger, and M. Stoelinga, “Resource
    interfaces,” in <i>Third International Conference on Embedded Software</i>, Philadelphia,
    PA, USA, 2003, vol. 2855, pp. 117–133.
  ista: 'Chakrabarti A, De Alfaro L, Henzinger TA, Stoelinga M. 2003. Resource interfaces.
    Third International Conference on Embedded Software. EMSOFT: Embedded Software
    , LNCS, vol. 2855, 117–133.'
  mla: Chakrabarti, Arindam, et al. “Resource Interfaces.” <i>Third International
    Conference on Embedded Software</i>, vol. 2855, ACM, 2003, pp. 117–33, doi:<a
    href="https://doi.org/10.1007/978-3-540-45212-6_9">10.1007/978-3-540-45212-6_9</a>.
  short: A. Chakrabarti, L. De Alfaro, T.A. Henzinger, M. Stoelinga, in:, Third International
    Conference on Embedded Software, ACM, 2003, pp. 117–133.
conference:
  end_date: 2003-10-15
  location: Philadelphia, PA, USA
  name: 'EMSOFT: Embedded Software '
  start_date: 2003-10-13
date_created: 2018-12-11T12:09:29Z
date_published: 2003-09-29T00:00:00Z
date_updated: 2024-01-08T10:48:11Z
day: '29'
doi: 10.1007/978-3-540-45212-6_9
extern: '1'
intvolume: '      2855'
language:
- iso: eng
month: '09'
oa_version: None
page: 117 - 133
publication: Third International Conference on Embedded Software
publication_identifier:
  isbn:
  - '9783540202233'
publication_status: published
publisher: ACM
publist_id: '148'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Resource interfaces
type: conference
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
volume: 2855
year: '2003'
...
---
_id: '4628'
abstract:
- lang: eng
  text: 'Discounting the future means that the value, today, of a unit payoffis 1
    if the payoffo ccurs today, a if it occurs tomorrow, a 2 if it occurs the day
    after tomorrow, and so on, for some real-valued discount factor 0 &lt; a &lt;
    1. Discounting (or inflation) is a key paradigm in economics and has been studied
    in Markov decision processes as well as game theory. We submit that discounting
    also has a natural place in systems engineering: for nonterminating systems, a
    potential bug in the far-away future is less troubling than a potential bug today.
    We therefore develop a systems theory with discounting. Our theory includes several
    basic elements: discounted versions of system properties that correspond to the
    ω-regular properties, fixpoint-based algorithms for checking discounted properties,
    and a quantitative notion of bisimilarity for capturing the difference between
    two states with respect to discounted properties. We present the theory in a general
    form that applies to probabilistic systems as well as multicomponent systems (games),
    but it readily specializes to classical transition systems. We show that discounting,
    besides its natural practical appeal, has also several mathematical benefits.
    First, the resulting theory is robust, in that small perturbations of a system
    can cause only small changes in the properties of the system. Second, the theory
    is computational, in that the values of discounted properties, as well as the
    discounted bisimilarity distance between states, can be computed to any desired
    degree of precision.'
acknowledgement: This research was supported in part by the NSF CAREER award CCR-0132780,
  the DARPA grant F33615-C-98-3614, the NSF grants CCR-9988172, CCR-0234690 and CCR-0225610,
  and the ONR grant N00014-02-1-0671.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Luca
  full_name: De Alfaro, Luca
  last_name: De Alfaro
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Ritankar
  full_name: Majumdar, Ritankar
  last_name: Majumdar
citation:
  ama: 'De Alfaro L, Henzinger TA, Majumdar R. Discounting the future in systems theory.
    In: <i>Proceedings of the 30th International Colloquium on Automata, Languages
    and Programming</i>. Vol 2719. Springer; 2003:1022-1037. doi:<a href="https://doi.org/10.1007/3-540-45061-0_79">10.1007/3-540-45061-0_79</a>'
  apa: 'De Alfaro, L., Henzinger, T. A., &#38; Majumdar, R. (2003). Discounting the
    future in systems theory. In <i>Proceedings of the 30th International Colloquium
    on Automata, Languages and Programming</i> (Vol. 2719, pp. 1022–1037). Eindhoven,
    The Netherlands: Springer. <a href="https://doi.org/10.1007/3-540-45061-0_79">https://doi.org/10.1007/3-540-45061-0_79</a>'
  chicago: De Alfaro, Luca, Thomas A Henzinger, and Ritankar Majumdar. “Discounting
    the Future in Systems Theory.” In <i>Proceedings of the 30th International Colloquium
    on Automata, Languages and Programming</i>, 2719:1022–37. Springer, 2003. <a href="https://doi.org/10.1007/3-540-45061-0_79">https://doi.org/10.1007/3-540-45061-0_79</a>.
  ieee: L. De Alfaro, T. A. Henzinger, and R. Majumdar, “Discounting the future in
    systems theory,” in <i>Proceedings of the 30th International Colloquium on Automata,
    Languages and Programming</i>, Eindhoven, The Netherlands, 2003, vol. 2719, pp.
    1022–1037.
  ista: 'De Alfaro L, Henzinger TA, Majumdar R. 2003. Discounting the future in systems
    theory. Proceedings of the 30th International Colloquium on Automata, Languages
    and Programming. ICALP: Automata, Languages and Programming, LNCS, vol. 2719,
    1022–1037.'
  mla: De Alfaro, Luca, et al. “Discounting the Future in Systems Theory.” <i>Proceedings
    of the 30th International Colloquium on Automata, Languages and Programming</i>,
    vol. 2719, Springer, 2003, pp. 1022–37, doi:<a href="https://doi.org/10.1007/3-540-45061-0_79">10.1007/3-540-45061-0_79</a>.
  short: L. De Alfaro, T.A. Henzinger, R. Majumdar, in:, Proceedings of the 30th International
    Colloquium on Automata, Languages and Programming, Springer, 2003, pp. 1022–1037.
conference:
  end_date: 2003-07-04
  location: Eindhoven, The Netherlands
  name: 'ICALP: Automata, Languages and Programming'
  start_date: 2003-06-30
date_created: 2018-12-11T12:09:50Z
date_published: 2003-06-25T00:00:00Z
date_updated: 2023-07-26T13:07:31Z
day: '25'
doi: 10.1007/3-540-45061-0_79
extern: '1'
intvolume: '      2719'
language:
- iso: eng
month: '06'
oa_version: None
page: 1022 - 1037
publication: Proceedings of the 30th International Colloquium on Automata, Languages
  and Programming
publication_identifier:
  isbn:
  - '9783540404934'
publication_status: published
publisher: Springer
publist_id: '77'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Discounting the future in systems theory
type: conference
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
volume: 2719
year: '2003'
...
---
_id: '4630'
abstract:
- lang: eng
  text: We consider concurrent two-person games played in real time, in which the
    players decide both which action to play, and when to play it. Such timed games
    differ from untimed games in two essential ways. First, players can take each
    other by surprise, because actions are played with delays that cannot be anticipated
    by the opponent. Second, a player should not be able to win the game by preventing
    time from diverging. We present a model of timed games that preserves the element
    of surprise and accounts for time divergence in a way that treats both players
    symmetrically and applies to all ω-regular winning conditions. We prove that the
    ability to take each other by surprise adds extra power to the players. For the
    case that the games are specified in the style of timed automata, we provide symbolic
    algorithms for their solution with respect to all ω-regular winning conditions.
    We also show that for these timed games, memory strategies are more powerful than
    memoryless strategies already in the case of reachability objectives.
acknowledgement: Supported in part by the AFOSR MURI grant F49620-00-1-0327, the DARPA
  grant F33615-C-98-3614, the MARCO grant 98-DT-660, -the ONR grant N00014-02-1-0671,
  the NSF grants CCR-9988172, CCR-0225610, and CCR-0234690, the NSF CAREER award CCR-0132780,
  and the MIUR grant MEFISTO.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Luca
  full_name: De Alfaro, Luca
  last_name: De Alfaro
- first_name: Marco
  full_name: Faella, Marco
  last_name: Faella
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Ritankar
  full_name: Majumdar, Ritankar
  last_name: Majumdar
- first_name: Mariëlle
  full_name: Stoelinga, Mariëlle
  last_name: Stoelinga
citation:
  ama: 'De Alfaro L, Faella M, Henzinger TA, Majumdar R, Stoelinga M. The element
    of surprise in timed games. In: <i>Proceedings of the 14th International Conference
    on Concurrency Theory</i>. Vol 2761. Schloss Dagstuhl - Leibniz-Zentrum für Informatik;
    2003:144-158. doi:<a href="https://doi.org/10.1007/978-3-540-45187-7_9">10.1007/978-3-540-45187-7_9</a>'
  apa: 'De Alfaro, L., Faella, M., Henzinger, T. A., Majumdar, R., &#38; Stoelinga,
    M. (2003). The element of surprise in timed games. In <i>Proceedings of the 14th
    International Conference on Concurrency Theory</i> (Vol. 2761, pp. 144–158). Marseille,
    France: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href="https://doi.org/10.1007/978-3-540-45187-7_9">https://doi.org/10.1007/978-3-540-45187-7_9</a>'
  chicago: De Alfaro, Luca, Marco Faella, Thomas A Henzinger, Ritankar Majumdar, and
    Mariëlle Stoelinga. “The Element of Surprise in Timed Games.” In <i>Proceedings
    of the 14th International Conference on Concurrency Theory</i>, 2761:144–58. Schloss
    Dagstuhl - Leibniz-Zentrum für Informatik, 2003. <a href="https://doi.org/10.1007/978-3-540-45187-7_9">https://doi.org/10.1007/978-3-540-45187-7_9</a>.
  ieee: L. De Alfaro, M. Faella, T. A. Henzinger, R. Majumdar, and M. Stoelinga, “The
    element of surprise in timed games,” in <i>Proceedings of the 14th International
    Conference on Concurrency Theory</i>, Marseille, France, 2003, vol. 2761, pp.
    144–158.
  ista: 'De Alfaro L, Faella M, Henzinger TA, Majumdar R, Stoelinga M. 2003. The element
    of surprise in timed games. Proceedings of the 14th International Conference on
    Concurrency Theory. CONCUR: Concurrency Theory, LNCS, vol. 2761, 144–158.'
  mla: De Alfaro, Luca, et al. “The Element of Surprise in Timed Games.” <i>Proceedings
    of the 14th International Conference on Concurrency Theory</i>, vol. 2761, Schloss
    Dagstuhl - Leibniz-Zentrum für Informatik, 2003, pp. 144–58, doi:<a href="https://doi.org/10.1007/978-3-540-45187-7_9">10.1007/978-3-540-45187-7_9</a>.
  short: L. De Alfaro, M. Faella, T.A. Henzinger, R. Majumdar, M. Stoelinga, in:,
    Proceedings of the 14th International Conference on Concurrency Theory, Schloss
    Dagstuhl - Leibniz-Zentrum für Informatik, 2003, pp. 144–158.
conference:
  end_date: 2003-09-05
  location: Marseille, France
  name: 'CONCUR: Concurrency Theory'
  start_date: 2003-09-03
date_created: 2018-12-11T12:09:51Z
date_published: 2003-08-21T00:00:00Z
date_updated: 2024-01-08T10:05:30Z
day: '21'
doi: 10.1007/978-3-540-45187-7_9
extern: '1'
intvolume: '      2761'
language:
- iso: eng
month: '08'
oa_version: None
page: 144 - 158
publication: Proceedings of the 14th International Conference on Concurrency Theory
publication_identifier:
  isbn:
  - '9783540407539'
publication_status: published
publisher: Schloss Dagstuhl - Leibniz-Zentrum für Informatik
publist_id: '78'
quality_controlled: '1'
scopus_import: '1'
status: public
title: The element of surprise in timed games
type: conference
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
volume: 2761
year: '2003'
...
---
_id: '12659'
abstract:
- lang: eng
  text: "For many years considerable efforts have been put into investigating and
    modelling hydrological processes of mountainous catchments. On the one hand, the
    complexity and intrinsically high variability of the involved processes as well
    as insufficient knowledge of the underlying physical mechanisms still induce large
    uncertainties in understanding observed phenomena and predicting the behaviour
    of the system. On the other hand, the demand for models that are able to simulate
    mountainous water resource systems is increasing because of the needs related
    to both water exploitation and water conservation, which clearly call for an integrated
    vision and modelling of these systems.\r\nAccordingly, this paper moves from a
    brief survey of the most significant achievements in mountain hydrology to discuss
    what could be future challenging issues related to the broader spectrum of questions,
    which hydrologic modelling of mountainous river systems may face in the next decades.
    Firstly, reference is made to existing methodologies for modelling alpine water
    systems, focussing on some specific aspects that provide a basis for the discussion
    of the weaknesses and perspectives of present simulation tools. The future is
    thus discussed, delineating some of the research challenges that may foster a
    comprehensive and integrated vision of water related issues in mountainous regions."
article_processing_charge: No
article_type: original
author:
- first_name: Paolo
  full_name: Burlando, Paolo
  last_name: Burlando
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
- first_name: Ulrich
  full_name: Strasser, Ulrich
  last_name: Strasser
citation:
  ama: Burlando P, Pellicciotti F, Strasser U. Modelling mountainous water systems
    between learning and speculating looking for challenges. <i>Hydrology Research</i>.
    2002;33(1):47-74. doi:<a href="https://doi.org/10.2166/nh.2002.0004">10.2166/nh.2002.0004</a>
  apa: Burlando, P., Pellicciotti, F., &#38; Strasser, U. (2002). Modelling mountainous
    water systems between learning and speculating looking for challenges. <i>Hydrology
    Research</i>. IWA Publishing. <a href="https://doi.org/10.2166/nh.2002.0004">https://doi.org/10.2166/nh.2002.0004</a>
  chicago: Burlando, Paolo, Francesca Pellicciotti, and Ulrich Strasser. “Modelling
    Mountainous Water Systems between Learning and Speculating Looking for Challenges.”
    <i>Hydrology Research</i>. IWA Publishing, 2002. <a href="https://doi.org/10.2166/nh.2002.0004">https://doi.org/10.2166/nh.2002.0004</a>.
  ieee: P. Burlando, F. Pellicciotti, and U. Strasser, “Modelling mountainous water
    systems between learning and speculating looking for challenges,” <i>Hydrology
    Research</i>, vol. 33, no. 1. IWA Publishing, pp. 47–74, 2002.
  ista: Burlando P, Pellicciotti F, Strasser U. 2002. Modelling mountainous water
    systems between learning and speculating looking for challenges. Hydrology Research.
    33(1), 47–74.
  mla: Burlando, Paolo, et al. “Modelling Mountainous Water Systems between Learning
    and Speculating Looking for Challenges.” <i>Hydrology Research</i>, vol. 33, no.
    1, IWA Publishing, 2002, pp. 47–74, doi:<a href="https://doi.org/10.2166/nh.2002.0004">10.2166/nh.2002.0004</a>.
  short: P. Burlando, F. Pellicciotti, U. Strasser, Hydrology Research 33 (2002) 47–74.
date_created: 2023-02-20T08:19:02Z
date_published: 2002-02-01T00:00:00Z
date_updated: 2023-02-20T08:30:15Z
day: '01'
doi: 10.2166/nh.2002.0004
extern: '1'
intvolume: '        33'
issue: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.2166/nh.2002.0004
month: '02'
oa: 1
oa_version: Published Version
page: 47-74
publication: Hydrology Research
publication_identifier:
  eissn:
  - 2224-7955
  issn:
  - 0029-1277
publication_status: published
publisher: IWA Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Modelling mountainous water systems between learning and speculating looking
  for challenges
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 33
year: '2002'
...
---
_id: '859'
abstract:
- lang: eng
  text: The polymeric ubiquitin (poly-u) genes are composed of tandem 228-bp repeats
    with no spacer sequences between individual monomer units. Ubiquitin is one of
    the most conserved proteins known to date, and the individual units within a number
    of poly-u genes are significantly more similar to each other than would be expected
    if each unit evolved independently. It has been proposed that the rather striking
    similarity among poly-u monomers in some lineages is caused by a series of homogenization
    events. Here we report the sequences of the polyubiquitin-C (Ubc) genes in two
    mouse strains. Analysis of these sequences, as well as those of the previously
    reported Chinese hamster and rat poly-u genes, supports the assertion that the
    homogenization of the ubiquitin-C gene in rodents is due to unequal crossing-over
    events. The sequence divergence of noncoding DNA was used to estimate the frequency
    of unequal crossing-over events (6.3 x 10-5 events per generation) in the Ubc
    gene, as well as to provide evidence of apparent selection in the poly-u gene.
acknowledgement: We are thankful to J.A. Southerland and P.L. Jiang for technical
  assistance in DNA sequencing, as well as to Y.I. Pavlov for helpful discussions.
  This work was supported by public Health Service Research Grant AI45135 from the
  Institute of Allergy and Infectious Diseases, National Institutes of Health.
article_processing_charge: No
article_type: original
author:
- first_name: Andrey
  full_name: Perelygin, Andrey
  last_name: Perelygin
- first_name: Fyodor
  full_name: Kondrashov, Fyodor
  id: 44FDEF62-F248-11E8-B48F-1D18A9856A87
  last_name: Kondrashov
  orcid: 0000-0001-8243-4694
- first_name: Igor
  full_name: Rogozin, Igor
  last_name: Rogozin
- first_name: Margo
  full_name: Brinton, Margo
  last_name: Brinton
citation:
  ama: Perelygin A, Kondrashov F, Rogozin I, Brinton M. Evolution of the mouse polyubiquitin
    C gene. <i>Journal of Molecular Evolution</i>. 2002;55(2):202-210. doi:<a href="https://doi.org/10.1007/s00239-002-2318-0">10.1007/s00239-002-2318-0</a>
  apa: Perelygin, A., Kondrashov, F., Rogozin, I., &#38; Brinton, M. (2002). Evolution
    of the mouse polyubiquitin C gene. <i>Journal of Molecular Evolution</i>. Springer.
    <a href="https://doi.org/10.1007/s00239-002-2318-0">https://doi.org/10.1007/s00239-002-2318-0</a>
  chicago: Perelygin, Andrey, Fyodor Kondrashov, Igor Rogozin, and Margo Brinton.
    “Evolution of the Mouse Polyubiquitin C Gene.” <i>Journal of Molecular Evolution</i>.
    Springer, 2002. <a href="https://doi.org/10.1007/s00239-002-2318-0">https://doi.org/10.1007/s00239-002-2318-0</a>.
  ieee: A. Perelygin, F. Kondrashov, I. Rogozin, and M. Brinton, “Evolution of the
    mouse polyubiquitin C gene,” <i>Journal of Molecular Evolution</i>, vol. 55, no.
    2. Springer, pp. 202–210, 2002.
  ista: Perelygin A, Kondrashov F, Rogozin I, Brinton M. 2002. Evolution of the mouse
    polyubiquitin C gene. Journal of Molecular Evolution. 55(2), 202–210.
  mla: Perelygin, Andrey, et al. “Evolution of the Mouse Polyubiquitin C Gene.” <i>Journal
    of Molecular Evolution</i>, vol. 55, no. 2, Springer, 2002, pp. 202–10, doi:<a
    href="https://doi.org/10.1007/s00239-002-2318-0">10.1007/s00239-002-2318-0</a>.
  short: A. Perelygin, F. Kondrashov, I. Rogozin, M. Brinton, Journal of Molecular
    Evolution 55 (2002) 202–210.
date_created: 2018-12-11T11:48:53Z
date_published: 2002-01-01T00:00:00Z
date_updated: 2023-07-26T12:01:34Z
day: '01'
doi: 10.1007/s00239-002-2318-0
extern: '1'
external_id:
  pmid:
  - '12107596'
intvolume: '        55'
issue: '2'
language:
- iso: eng
month: '01'
oa_version: None
page: 202 - 210
pmid: 1
publication: Journal of Molecular Evolution
publication_identifier:
  issn:
  - 0022-2844
publication_status: published
publisher: Springer
publist_id: '6787'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Evolution of the mouse polyubiquitin C gene
type: journal_article
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
volume: 55
year: '2002'
...
---
_id: '871'
abstract:
- lang: eng
  text: 'BACKGROUND: Gene duplications have a major role in the evolution of new biological
    functions. Theoretical studies often assume that a duplication per se is selectively
    neutral and that, following a duplication, one of the gene copies is freed from
    purifying (stabilizing) selection, which creates the potential for evolution of
    a new function. RESULTS: In search of systematic evidence of accelerated evolution
    after duplication, we used data from 26 bacterial, six archaeal, and seven eukaryotic
    genomes to compare the mode and strength of selection acting on recently duplicated
    genes (paralogs) and on similarly diverged, unduplicated orthologous genes in
    different species. We find that the ratio of nonsynonymous to synonymous substitutions
    (Kn/Ks) in most paralogous pairs is &lt;&lt;1 and that paralogs typically evolve
    at similar rates, without significant asymmetry, indicating that both paralogs
    produced by a duplication are subject to purifying selection. This selection is,
    however, substantially weaker than the purifying selection affecting unduplicated
    orthologs that have diverged to the same extent as the analyzed paralogs. Most
    of the recently duplicated genes appear to be involved in various forms of environmental
    response; in particular, many of them encode membrane and secreted proteins. CONCLUSIONS:
    The results of this analysis indicate that recently duplicated paralogs evolve
    faster than orthologs with the same level of divergence and similar functions,
    but apparently do not experience a phase of neutral evolution. We hypothesize
    that gene duplications that persist in an evolving lineage are beneficial from
    the time of their origin, due primarily to a protein dosage effect in response
    to variable environmental conditions; duplications are likely to give rise to
    new functions at a later phase of their evolution once a higher level of divergence
    is reached.'
acknowledgement: We are grateful to A.S. Kondrashov for numerous helpful suggestions,
  to I. King Jordan, M.A. Roytberg, J.L. Spouge and D.A. Kondrashov for useful discussions
  and to A.S. Kondrashov, I. King Jordan and D.J. Lipman for critical reading of the
  manuscript.
article_processing_charge: No
article_type: original
author:
- first_name: Fyodor
  full_name: Kondrashov, Fyodor
  id: 44FDEF62-F248-11E8-B48F-1D18A9856A87
  last_name: Kondrashov
  orcid: 0000-0001-8243-4694
- first_name: Igor
  full_name: Rogozin, Igor
  last_name: Rogozin
- first_name: Yuri
  full_name: Wolf, Yuri
  last_name: Wolf
- first_name: Eugene
  full_name: Koonin, Eugene
  last_name: Koonin
citation:
  ama: Kondrashov F, Rogozin I, Wolf Y, Koonin E. Selection in the evolution of gene
    duplications . <i>Genome Biology</i>. 2002;3(2). doi:<a href="https://doi.org/10.1186/gb-2002-3-2-research0008">10.1186/gb-2002-3-2-research0008</a>
  apa: Kondrashov, F., Rogozin, I., Wolf, Y., &#38; Koonin, E. (2002). Selection in
    the evolution of gene duplications . <i>Genome Biology</i>. BioMed Central. <a
    href="https://doi.org/10.1186/gb-2002-3-2-research0008">https://doi.org/10.1186/gb-2002-3-2-research0008</a>
  chicago: Kondrashov, Fyodor, Igor Rogozin, Yuri Wolf, and Eugene Koonin. “Selection
    in the Evolution of Gene Duplications .” <i>Genome Biology</i>. BioMed Central,
    2002. <a href="https://doi.org/10.1186/gb-2002-3-2-research0008">https://doi.org/10.1186/gb-2002-3-2-research0008</a>.
  ieee: F. Kondrashov, I. Rogozin, Y. Wolf, and E. Koonin, “Selection in the evolution
    of gene duplications ,” <i>Genome Biology</i>, vol. 3, no. 2. BioMed Central,
    2002.
  ista: Kondrashov F, Rogozin I, Wolf Y, Koonin E. 2002. Selection in the evolution
    of gene duplications . Genome Biology. 3(2).
  mla: Kondrashov, Fyodor, et al. “Selection in the Evolution of Gene Duplications
    .” <i>Genome Biology</i>, vol. 3, no. 2, BioMed Central, 2002, doi:<a href="https://doi.org/10.1186/gb-2002-3-2-research0008">10.1186/gb-2002-3-2-research0008</a>.
  short: F. Kondrashov, I. Rogozin, Y. Wolf, E. Koonin, Genome Biology 3 (2002).
date_created: 2018-12-11T11:48:57Z
date_published: 2002-01-01T00:00:00Z
date_updated: 2023-07-26T11:48:27Z
day: '01'
doi: 10.1186/gb-2002-3-2-research0008
extern: '1'
external_id:
  pmid:
  - '11864370'
intvolume: '         3'
issue: '2'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC65685/
month: '01'
oa: 1
oa_version: Published Version
pmid: 1
publication: Genome Biology
publication_identifier:
  issn:
  - 1465-6906
publication_status: published
publisher: BioMed Central
publist_id: '6781'
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Selection in the evolution of gene duplications '
type: journal_article
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
volume: 3
year: '2002'
...
---
_id: '885'
abstract:
- lang: eng
  text: We study fitness landscape in the space of protein sequences by relating sets
    of human pathogenic missense mutations in 32 proteins to amino acid substitutions
    that occurred in the course of evolution of these proteins. On average, ≈10% of
    deviations of a nonhuman protein from its human ortholog are compensated pathogenic
    deviations (CPDs), i.e., are caused by an amino acid substitution that, at this
    site, would be pathogenic to humans. Normal functioning of a CPD-containing protein
    must be caused by other, compensatory deviations of the nonhuman species from
    humans. Together, a CPD and the corresponding compensatory deviation form a Dobzhansky-Muller
    incompatibility that can be visualized as the corner on a fitness ridge. Thus,
    proteins evolve along fitness ridges which contain only ≈10 steps between sucessive
    corners. The fraction of CPDs among all deviations of a protein from its human
    ortholog does not increase with the evolutionary distance between the proteins,
    indicating that subtitutions that carry evolving proteins around these corners
    occur in rapid succession, driven by positive selection. Data on fitness of interspecies
    hybrids suggest that the compensatory change that makes a CPD fit usually occurs
    within the same protein. Data on protein structures and on cooccurrence of amino
    acids at different sites of multiple orthologous proteins often make it possible
    to provisionally identify the substitution that compensates a partiCUlar CPD.
article_processing_charge: No
article_type: original
author:
- first_name: Alexey
  full_name: Kondrashov, Alexey
  last_name: Kondrashov
- first_name: Shamil
  full_name: Sunyaev, Shamil
  last_name: Sunyaev
- first_name: Fyodor
  full_name: Kondrashov, Fyodor
  id: 44FDEF62-F248-11E8-B48F-1D18A9856A87
  last_name: Kondrashov
  orcid: 0000-0001-8243-4694
citation:
  ama: Kondrashov A, Sunyaev S, Kondrashov F. Dobzhansky-Muller incompatibilities
    in protein evolution. <i>PNAS</i>. 2002;99(23):14878-14883. doi:<a href="https://doi.org/10.1073/pnas.232565499">10.1073/pnas.232565499</a>
  apa: Kondrashov, A., Sunyaev, S., &#38; Kondrashov, F. (2002). Dobzhansky-Muller
    incompatibilities in protein evolution. <i>PNAS</i>. National Academy of Sciences.
    <a href="https://doi.org/10.1073/pnas.232565499">https://doi.org/10.1073/pnas.232565499</a>
  chicago: Kondrashov, Alexey, Shamil Sunyaev, and Fyodor Kondrashov. “Dobzhansky-Muller
    Incompatibilities in Protein Evolution.” <i>PNAS</i>. National Academy of Sciences,
    2002. <a href="https://doi.org/10.1073/pnas.232565499">https://doi.org/10.1073/pnas.232565499</a>.
  ieee: A. Kondrashov, S. Sunyaev, and F. Kondrashov, “Dobzhansky-Muller incompatibilities
    in protein evolution,” <i>PNAS</i>, vol. 99, no. 23. National Academy of Sciences,
    pp. 14878–14883, 2002.
  ista: Kondrashov A, Sunyaev S, Kondrashov F. 2002. Dobzhansky-Muller incompatibilities
    in protein evolution. PNAS. 99(23), 14878–14883.
  mla: Kondrashov, Alexey, et al. “Dobzhansky-Muller Incompatibilities in Protein
    Evolution.” <i>PNAS</i>, vol. 99, no. 23, National Academy of Sciences, 2002,
    pp. 14878–83, doi:<a href="https://doi.org/10.1073/pnas.232565499">10.1073/pnas.232565499</a>.
  short: A. Kondrashov, S. Sunyaev, F. Kondrashov, PNAS 99 (2002) 14878–14883.
date_created: 2018-12-11T11:49:01Z
date_published: 2002-11-12T00:00:00Z
date_updated: 2023-07-26T09:48:37Z
day: '12'
doi: 10.1073/pnas.232565499
extern: '1'
external_id:
  pmid:
  - '12403824'
intvolume: '        99'
issue: '23'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC137512/
month: '11'
oa: 1
oa_version: Published Version
page: 14878 - 14883
pmid: 1
publication: PNAS
publication_identifier:
  issn:
  - 0027-8424
publication_status: published
publisher: National Academy of Sciences
publist_id: '6763'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Dobzhansky-Muller incompatibilities in protein evolution
type: journal_article
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
volume: 99
year: '2002'
...
---
_id: '897'
abstract:
- lang: eng
  text: "Transcription is a slow and expensive process: in eukaryotes, approximately
    20 nucleotides can be transcribed per second at the expense of at least two ATP
    molecules per nucleotide. Thus, at least for highly expressed genes, transcription
    of long introns, which are particularly common in mammals, is costly. Using data
    on the expression of genes that encode proteins in Caenorhabditis elegans and
    Homo sapiens, we show that introns in highly expressed genes are substantially
    shorter than those in genes that are expressed at low levels. This difference
    is greater in humans, such that introns are, on average, 14 times shorter in highly
    expressed genes than in genes with low expression, whereas in C. Elegans the difference
    in intron length is only twofold. In contrast, the density of introns in a gene
    does not strongly depend on the level of gene expression. Thus, natural selection
    appears to favor short introns in highly expressed genes to minimize the cost
    of transcription and other molecular processes, such as splicing.\r\n"
acknowledgement: We are grateful to A. Kondrashov, I. Rogozin and A. Feldman for reading
  the manuscript and P. Bouman, J. Cherry, J. Blumensteil and T. Kim for discussion.
article_processing_charge: No
article_type: original
author:
- first_name: Cristian
  full_name: Castillo Davis, Cristian
  last_name: Castillo Davis
- first_name: Sergei
  full_name: Mekhedov, Sergei
  last_name: Mekhedov
- first_name: Daniel
  full_name: Hartl, Daniel
  last_name: Hartl
- first_name: Eugene
  full_name: Koonin, Eugene
  last_name: Koonin
- first_name: Fyodor
  full_name: Kondrashov, Fyodor
  id: 44FDEF62-F248-11E8-B48F-1D18A9856A87
  last_name: Kondrashov
  orcid: 0000-0001-8243-4694
citation:
  ama: Castillo Davis C, Mekhedov S, Hartl D, Koonin E, Kondrashov F. Selection for
    short introns in highly expressed genes. <i>Nature Genetics</i>. 2002;31(4):415-418.
    doi:<a href="https://doi.org/10.1038/ng940">10.1038/ng940</a>
  apa: Castillo Davis, C., Mekhedov, S., Hartl, D., Koonin, E., &#38; Kondrashov,
    F. (2002). Selection for short introns in highly expressed genes. <i>Nature Genetics</i>.
    Nature Publishing Group. <a href="https://doi.org/10.1038/ng940">https://doi.org/10.1038/ng940</a>
  chicago: Castillo Davis, Cristian, Sergei Mekhedov, Daniel Hartl, Eugene Koonin,
    and Fyodor Kondrashov. “Selection for Short Introns in Highly Expressed Genes.”
    <i>Nature Genetics</i>. Nature Publishing Group, 2002. <a href="https://doi.org/10.1038/ng940">https://doi.org/10.1038/ng940</a>.
  ieee: C. Castillo Davis, S. Mekhedov, D. Hartl, E. Koonin, and F. Kondrashov, “Selection
    for short introns in highly expressed genes,” <i>Nature Genetics</i>, vol. 31,
    no. 4. Nature Publishing Group, pp. 415–418, 2002.
  ista: Castillo Davis C, Mekhedov S, Hartl D, Koonin E, Kondrashov F. 2002. Selection
    for short introns in highly expressed genes. Nature Genetics. 31(4), 415–418.
  mla: Castillo Davis, Cristian, et al. “Selection for Short Introns in Highly Expressed
    Genes.” <i>Nature Genetics</i>, vol. 31, no. 4, Nature Publishing Group, 2002,
    pp. 415–18, doi:<a href="https://doi.org/10.1038/ng940">10.1038/ng940</a>.
  short: C. Castillo Davis, S. Mekhedov, D. Hartl, E. Koonin, F. Kondrashov, Nature
    Genetics 31 (2002) 415–418.
date_created: 2018-12-11T11:49:05Z
date_published: 2002-08-01T00:00:00Z
date_updated: 2023-07-26T09:45:30Z
day: '01'
doi: 10.1038/ng940
extern: '1'
external_id:
  pmid:
  - '12134150'
intvolume: '        31'
issue: '4'
language:
- iso: eng
month: '08'
oa_version: None
page: 415 - 418
pmid: 1
publication: Nature Genetics
publication_status: published
publisher: Nature Publishing Group
publist_id: '6751'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Selection for short introns in highly expressed genes
type: journal_article
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
volume: 31
year: '2002'
...
---
_id: '1737'
abstract:
- lang: eng
  text: A new solvent-free composite polymer electrolyte consisting of high-molecular
    mass polyethylene oxide (PEO) filled with titanium oxide and containing LiI and
    I2 was developed. The introduction of the inorganic filler (TiO2 Degussa P25)
    into the polymer matrix produces dramatic morphological changes to the host polymer
    structure. Upon addition of the inorganic oxide, the surface roughness increases,
    with respect to the original polymer and in parallel, the fractal dimension decreases.
    Both the thermograms and the atomic force microscope (AFM) pictures confirm the
    amorphicity of the composite electrolyte. The polymer sub-units are held together
    in a parallel orientation, forming straight long chains of about 500 nm in width,
    along which TiO2 spherical particles of about 20-25 nm in diameter are distributed.
    The polymer chains separated by the titania particles are arranged in a three-dimensional,
    mechanically stable network, that creates free space and voids into which the
    iodide/triodide anions can easily migrate. All solid-state dye-sensitized solar
    cells fabricated using this composite electrolyte present high efficiencies (typical
    maximum incident photon to current efficiency (IPCE) as high as 40% at 520 nm
    and overall conversion efficiency (η) of 0.96% (Voc = 0.67 V, Jsc = 2.050 mA/cm2,
    FF = 39%) under direct solar irradiation. Further improvement of the photovoltaic
    performance is expected by optimization of the electrolyte parameters and of the
    cell assembly.
acknowledgement: Financial support from NCSR “Demokritos” (Dimoerevna 598 project),
  Empeirikeion Foundation and General Secretariat for Research and Technology of Greece
  (EPET II, Greece–France and Greece–Czech Republic bilateral collaboration projects)
  is also greatly acknowledged. G. Katsaros thanks the Greek State Scholarships Foundation
  (IKY) for fellowship allowance
article_processing_charge: No
author:
- first_name: Georgios
  full_name: Katsaros, Georgios
  id: 38DB5788-F248-11E8-B48F-1D18A9856A87
  last_name: Katsaros
- first_name: Thomas
  full_name: Stergiopoulos, Thomas
  last_name: Stergiopoulos
- first_name: Iannis
  full_name: Arabatzis, Iannis
  last_name: Arabatzis
- first_name: Kyriaki
  full_name: Papadokostaki, Kyriaki
  last_name: Papadokostaki
- first_name: Polycarpos
  full_name: Falaras, Polycarpos
  last_name: Falaras
citation:
  ama: 'Katsaros G, Stergiopoulos T, Arabatzis I, Papadokostaki K, Falaras P. A solvent-free
    composite polymer/inorganic oxide electrolyte for high efficiency solid-state
    dye-sensitized solar cells. <i>Journal of Photochemistry and Photobiology A: Chemistry</i>.
    2002;149(1-3):191-198. doi:<a href="https://doi.org/10.1016/S1010-6030(02)00027-8">10.1016/S1010-6030(02)00027-8</a>'
  apa: 'Katsaros, G., Stergiopoulos, T., Arabatzis, I., Papadokostaki, K., &#38; Falaras,
    P. (2002). A solvent-free composite polymer/inorganic oxide electrolyte for high
    efficiency solid-state dye-sensitized solar cells. <i>Journal of Photochemistry
    and Photobiology A: Chemistry</i>. Elsevier. <a href="https://doi.org/10.1016/S1010-6030(02)00027-8">https://doi.org/10.1016/S1010-6030(02)00027-8</a>'
  chicago: 'Katsaros, Georgios, Thomas Stergiopoulos, Iannis Arabatzis, Kyriaki Papadokostaki,
    and Polycarpos Falaras. “A Solvent-Free Composite Polymer/Inorganic Oxide Electrolyte
    for High Efficiency Solid-State Dye-Sensitized Solar Cells.” <i>Journal of Photochemistry
    and Photobiology A: Chemistry</i>. Elsevier, 2002. <a href="https://doi.org/10.1016/S1010-6030(02)00027-8">https://doi.org/10.1016/S1010-6030(02)00027-8</a>.'
  ieee: 'G. Katsaros, T. Stergiopoulos, I. Arabatzis, K. Papadokostaki, and P. Falaras,
    “A solvent-free composite polymer/inorganic oxide electrolyte for high efficiency
    solid-state dye-sensitized solar cells,” <i>Journal of Photochemistry and Photobiology
    A: Chemistry</i>, vol. 149, no. 1–3. Elsevier, pp. 191–198, 2002.'
  ista: 'Katsaros G, Stergiopoulos T, Arabatzis I, Papadokostaki K, Falaras P. 2002.
    A solvent-free composite polymer/inorganic oxide electrolyte for high efficiency
    solid-state dye-sensitized solar cells. Journal of Photochemistry and Photobiology
    A: Chemistry. 149(1–3), 191–198.'
  mla: 'Katsaros, Georgios, et al. “A Solvent-Free Composite Polymer/Inorganic Oxide
    Electrolyte for High Efficiency Solid-State Dye-Sensitized Solar Cells.” <i>Journal
    of Photochemistry and Photobiology A: Chemistry</i>, vol. 149, no. 1–3, Elsevier,
    2002, pp. 191–98, doi:<a href="https://doi.org/10.1016/S1010-6030(02)00027-8">10.1016/S1010-6030(02)00027-8</a>.'
  short: 'G. Katsaros, T. Stergiopoulos, I. Arabatzis, K. Papadokostaki, P. Falaras,
    Journal of Photochemistry and Photobiology A: Chemistry 149 (2002) 191–198.'
date_created: 2018-12-11T11:53:44Z
date_published: 2002-06-28T00:00:00Z
date_updated: 2023-07-26T08:56:55Z
day: '28'
doi: 10.1016/S1010-6030(02)00027-8
extern: '1'
intvolume: '       149'
issue: 1-3
language:
- iso: eng
month: '06'
oa_version: None
page: 191 - 198
publication: 'Journal of Photochemistry and Photobiology A: Chemistry'
publication_identifier:
  issn:
  - 1010-6030
publication_status: published
publisher: Elsevier
publist_id: '5387'
status: public
title: A solvent-free composite polymer/inorganic oxide electrolyte for high efficiency
  solid-state dye-sensitized solar cells
type: journal_article
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
volume: 149
year: '2002'
...
---
_id: '1738'
abstract:
- lang: eng
  text: New dyes of the type Ru(II)(bdmpp)(bpy) [where bdmpp is 2,6-bis(3,5-dimethyl-N-pyrazoyl)pyridine
    and bpy is 2,2′-bipyridine-4,4′-dicarboxylic acid] are prepared and characterized
    by infra-red (IR), mass (MS) and electrospray mass spectroscopy (ES-MS) as well
    as 1H NMR (1D and 2D) spectroscopies. The compounds present broad and very high
    intensity MLCT absorption bands in the visible and can be chemically anchored
    on TiO2 films via ester-like linkage involving carboxylato groups. These complexes
    have been tested with success as potential molecular antennas in dye-sensitized
    solar cells. Both opaque and transparent nanocrystalline TiO2 thin film electrodes
    obtained by a doctor blade technique sensitized by these complexes were incorporated
    in a sandwich type regenerative photoelectrochemical solar cell containing 0.1M
    LiI +0.01M I2 in propylene carbonate as well as a platinized conductive glass
    counter electrode. The cell was characterized by Raman spectroscopy under anodic
    and cathodic bias. Two new vibration bands were observed in the lower frequency
    region. The first one at 112 cm-1 is due to tri-iodide formed on the photoactive
    electrode, and the second one at 167 cm-1 is a sign of the dye/iodide interaction
    and corresponds to a vibration in a chemically stable &quot;DI&quot; intermediate
    species. Under direct sunlight illumination (solar irradiance of 60 mW/cm2) by
    using a composite polymer solid state electrolyte, the cell ITO/TiO2/[Ru(II)(bdmpp)(bpy)(NCS)](PF6)/electrolyte/Pt-ITO
    produced a continuous photocurrent as high as 4.29mA/cm2, and gave IPCE values
    about half of the corresponding values obtained by the standard N3 dye under the
    same conditions. The photovoltage is about 600 mV and the overall energy conversion
    cell's efficiency is as high as 1.72%.
author:
- first_name: Polycarpos
  full_name: Falaras, Polycarpos
  last_name: Falaras
- first_name: Katerina
  full_name: Chryssou, Katerina
  last_name: Chryssou
- first_name: Thomas
  full_name: Stergiopoulos, Thomas
  last_name: Stergiopoulos
- first_name: Ioannis
  full_name: Arabatzis, Ioannis M
  last_name: Arabatzis
- first_name: Georgios
  full_name: Georgios Katsaros
  id: 38DB5788-F248-11E8-B48F-1D18A9856A87
  last_name: Katsaros
- first_name: Vincent
  full_name: Catalano, Vincent J
  last_name: Catalano
- first_name: Raif
  full_name: Kurtaran, Raif
  last_name: Kurtaran
- first_name: Anne
  full_name: Hugot-Le Goff, Anne
  last_name: Hugot Le Goff
- first_name: Marie
  full_name: Bernard, Marie C
  last_name: Bernard
citation:
  ama: 'Falaras P, Chryssou K, Stergiopoulos T, et al. Dye-sensitization of titanium
    dioxide thin films by Ru(II)-bpp-bpy complexes. In: Vol 4801. SPIE; 2002:125-135.
    doi:<a href="https://doi.org/10.1117/12.452446">10.1117/12.452446</a>'
  apa: Falaras, P., Chryssou, K., Stergiopoulos, T., Arabatzis, I., Katsaros, G.,
    Catalano, V., … Bernard, M. (2002). Dye-sensitization of titanium dioxide thin
    films by Ru(II)-bpp-bpy complexes (Vol. 4801, pp. 125–135). Presented at the Organic
    Photovoltaics, SPIE. <a href="https://doi.org/10.1117/12.452446">https://doi.org/10.1117/12.452446</a>
  chicago: Falaras, Polycarpos, Katerina Chryssou, Thomas Stergiopoulos, Ioannis Arabatzis,
    Georgios Katsaros, Vincent Catalano, Raif Kurtaran, Anne Hugot Le Goff, and Marie
    Bernard. “Dye-Sensitization of Titanium Dioxide Thin Films by Ru(II)-Bpp-Bpy Complexes,”
    4801:125–35. SPIE, 2002. <a href="https://doi.org/10.1117/12.452446">https://doi.org/10.1117/12.452446</a>.
  ieee: P. Falaras <i>et al.</i>, “Dye-sensitization of titanium dioxide thin films
    by Ru(II)-bpp-bpy complexes,” presented at the Organic Photovoltaics, 2002, vol.
    4801, pp. 125–135.
  ista: Falaras P, Chryssou K, Stergiopoulos T, Arabatzis I, Katsaros G, Catalano
    V, Kurtaran R, Hugot Le Goff A, Bernard M. 2002. Dye-sensitization of titanium
    dioxide thin films by Ru(II)-bpp-bpy complexes. Organic Photovoltaics vol. 4801,
    125–135.
  mla: Falaras, Polycarpos, et al. <i>Dye-Sensitization of Titanium Dioxide Thin Films
    by Ru(II)-Bpp-Bpy Complexes</i>. Vol. 4801, SPIE, 2002, pp. 125–35, doi:<a href="https://doi.org/10.1117/12.452446">10.1117/12.452446</a>.
  short: P. Falaras, K. Chryssou, T. Stergiopoulos, I. Arabatzis, G. Katsaros, V.
    Catalano, R. Kurtaran, A. Hugot Le Goff, M. Bernard, in:, SPIE, 2002, pp. 125–135.
conference:
  name: Organic Photovoltaics
date_created: 2018-12-11T11:53:45Z
date_published: 2002-01-01T00:00:00Z
date_updated: 2021-01-12T06:52:53Z
day: '01'
doi: 10.1117/12.452446
extern: 1
intvolume: '      4801'
month: '01'
page: 125 - 135
publication_status: published
publisher: SPIE
publist_id: '5385'
quality_controlled: 0
status: public
title: Dye-sensitization of titanium dioxide thin films by Ru(II)-bpp-bpy complexes
type: conference
volume: 4801
year: '2002'
...
---
_id: '1739'
abstract:
- lang: eng
  text: Poly(ethylene oxide)/titania polymer electrolyte based photoelectrochemical
    cells have been fabricated with Ru(dcbpy)2(NCS)2 complex as the sensitizer and
    nanoporous TiO2 films as photoanodes. The introduction of the titania filler into
    the poly(ethylene oxide) matrix reduces the crystallinity of the polymer and enhances
    the mobility of the 1-/13 - redox couple, resulting in outstanding overall conversion
    efficiency (4.2% under direct sunlight illumination) of the corresponding dye-sensitized
    nanocrystalline TiO2 solar cell, one of the best efficiencies reported to date
    for a solid-state device.
acknowledgement: 'Financial support from NCSR “Demokritos” and GSRT-Greece is greatly
  acknowledged. '
author:
- first_name: Thomas
  full_name: Stergiopoulos, Thomas
  last_name: Stergiopoulos
- first_name: Iannis
  full_name: Arabatzis, Iannis M
  last_name: Arabatzis
- first_name: Georgios
  full_name: Georgios Katsaros
  id: 38DB5788-F248-11E8-B48F-1D18A9856A87
  last_name: Katsaros
- first_name: Polycarpos
  full_name: Falaras, Polycarpos
  last_name: Falaras
citation:
  ama: Stergiopoulos T, Arabatzis I, Katsaros G, Falaras P. Binary Polyethylene Oxide/Titania
    Solid-State Redox Electrolyte for Highly Efficient Nanocrystalline TiO2 Photoelectrochemical
    Cells. <i>Nano Letters</i>. 2002;2(11):1259-1261. doi:<a href="https://doi.org/10.1021/nl025798u">10.1021/nl025798u</a>
  apa: Stergiopoulos, T., Arabatzis, I., Katsaros, G., &#38; Falaras, P. (2002). Binary
    Polyethylene Oxide/Titania Solid-State Redox Electrolyte for Highly Efficient
    Nanocrystalline TiO2 Photoelectrochemical Cells. <i>Nano Letters</i>. American
    Chemical Society. <a href="https://doi.org/10.1021/nl025798u">https://doi.org/10.1021/nl025798u</a>
  chicago: Stergiopoulos, Thomas, Iannis Arabatzis, Georgios Katsaros, and Polycarpos
    Falaras. “Binary Polyethylene Oxide/Titania Solid-State Redox Electrolyte for
    Highly Efficient Nanocrystalline TiO2 Photoelectrochemical Cells.” <i>Nano Letters</i>.
    American Chemical Society, 2002. <a href="https://doi.org/10.1021/nl025798u">https://doi.org/10.1021/nl025798u</a>.
  ieee: T. Stergiopoulos, I. Arabatzis, G. Katsaros, and P. Falaras, “Binary Polyethylene
    Oxide/Titania Solid-State Redox Electrolyte for Highly Efficient Nanocrystalline
    TiO2 Photoelectrochemical Cells,” <i>Nano Letters</i>, vol. 2, no. 11. American
    Chemical Society, pp. 1259–1261, 2002.
  ista: Stergiopoulos T, Arabatzis I, Katsaros G, Falaras P. 2002. Binary Polyethylene
    Oxide/Titania Solid-State Redox Electrolyte for Highly Efficient Nanocrystalline
    TiO2 Photoelectrochemical Cells. Nano Letters. 2(11), 1259–1261.
  mla: Stergiopoulos, Thomas, et al. “Binary Polyethylene Oxide/Titania Solid-State
    Redox Electrolyte for Highly Efficient Nanocrystalline TiO2 Photoelectrochemical
    Cells.” <i>Nano Letters</i>, vol. 2, no. 11, American Chemical Society, 2002,
    pp. 1259–61, doi:<a href="https://doi.org/10.1021/nl025798u">10.1021/nl025798u</a>.
  short: T. Stergiopoulos, I. Arabatzis, G. Katsaros, P. Falaras, Nano Letters 2 (2002)
    1259–1261.
date_created: 2018-12-11T11:53:45Z
date_published: 2002-11-01T00:00:00Z
date_updated: 2021-01-12T06:52:53Z
day: '01'
doi: 10.1021/nl025798u
extern: 1
intvolume: '         2'
issue: '11'
month: '11'
page: 1259 - 1261
publication: Nano Letters
publication_status: published
publisher: American Chemical Society
publist_id: '5386'
quality_controlled: 0
status: public
title: Binary Polyethylene Oxide/Titania Solid-State Redox Electrolyte for Highly
  Efficient Nanocrystalline TiO2 Photoelectrochemical Cells
type: journal_article
volume: 2
year: '2002'
...
---
_id: '204'
abstract:
- lang: eng
  text: Let k⩾5 be an integer, and let x⩾1 be an arbitrary real number. We derive
    a bound[Formula presented] for the number of positive integers less than or equal
    to x which can be represented as a sum of two non-negative coprime kth powers,
    in essentially more than one way.
article_processing_charge: No
article_type: original
author:
- first_name: Timothy D
  full_name: Browning, Timothy D
  id: 35827D50-F248-11E8-B48F-1D18A9856A87
  last_name: Browning
  orcid: 0000-0002-8314-0177
citation:
  ama: Browning TD. Equal Sums of Two kth Powers. <i>Journal of Number Theory</i>.
    2002;96(2):293-318. doi:<a href="https://doi.org/10.1006/jnth.2002.2800">10.1006/jnth.2002.2800</a>
  apa: Browning, T. D. (2002). Equal Sums of Two kth Powers. <i>Journal of Number
    Theory</i>. Academic Press. <a href="https://doi.org/10.1006/jnth.2002.2800">https://doi.org/10.1006/jnth.2002.2800</a>
  chicago: Browning, Timothy D. “Equal Sums of Two Kth Powers.” <i>Journal of Number
    Theory</i>. Academic Press, 2002. <a href="https://doi.org/10.1006/jnth.2002.2800">https://doi.org/10.1006/jnth.2002.2800</a>.
  ieee: T. D. Browning, “Equal Sums of Two kth Powers,” <i>Journal of Number Theory</i>,
    vol. 96, no. 2. Academic Press, pp. 293–318, 2002.
  ista: Browning TD. 2002. Equal Sums of Two kth Powers. Journal of Number Theory.
    96(2), 293–318.
  mla: Browning, Timothy D. “Equal Sums of Two Kth Powers.” <i>Journal of Number Theory</i>,
    vol. 96, no. 2, Academic Press, 2002, pp. 293–318, doi:<a href="https://doi.org/10.1006/jnth.2002.2800">10.1006/jnth.2002.2800</a>.
  short: T.D. Browning, Journal of Number Theory 96 (2002) 293–318.
date_created: 2018-12-11T11:45:11Z
date_published: 2002-10-02T00:00:00Z
date_updated: 2023-07-26T12:15:14Z
day: '02'
doi: 10.1006/jnth.2002.2800
extern: '1'
intvolume: '        96'
issue: '2'
language:
- iso: eng
month: '10'
oa_version: Published Version
page: 293 - 318
publication: Journal of Number Theory
publication_identifier:
  issn:
  - 0022-314X
publication_status: published
publisher: Academic Press
publist_id: '7708'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Equal Sums of Two kth Powers
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ea97e931-d5af-11eb-85d4-e6957dddbf17
volume: 96
year: '2002'
...
