---
_id: '2633'
abstract:
- lang: eng
  text: The modulation of calcium channels by metabotropic glutamate receptors (mGluRs)
    is a key event in the fine-tuning of neurotransmitter release. Here we report
    that, in cerebrocortical nerve terminals of adult rats, the inhibition of glutamate
    release is mediated by mGluR7. In this preparation, the major component of glutamate
    release is supported by P/Q-type Ca2+ channels (72.7%). However, mGluR7 selectively
    reduced the release component that is associated with N-type Ca2+ channels (29.9%).
    Inhibition of P/Q channels by mGluR7 is not masked by the higher efficiency of
    these channels in driving glutamate release when compared with N-type channels.
    Thus, activation of mGluR7 failed to reduce the release associated with P/Q channels
    when the extracellular calcium concentration, ([Ca2+]o), was reduced from 1.3
    to 0.5 mM. Through Ca2+ imaging, we show that Ca2+ channels are distributed in
    a heterogeneous manner in individual nerve terminals. Indeed, in this preparation,
    nerve terminals were observed that contain N-type (31.1%; conotoxin GVIA-sensitive)
    or P/Q-type (64.3%; agatoxin IVA-sensitive) channels or that were insensitive
    to these two toxins (4.6%). Interestingly, the great majority of the responses
    to L-AP4 (95.4%) were observed in nerve terminals containing N-type channels.
    This specific co-localization of mGluR7 and N-type Ca2+-channels could explain
    the failure of the receptor to inhibit the P/Q channel-associated release component
    and also reveal the existence of specific targeting mechanisms to localize the
    two proteins in the same nerve terminal subset.
author:
- first_name: Carmelo
  full_name: Millán, Carmelo
  last_name: Millán
- first_name: Enrique
  full_name: Castro, Enrique G
  last_name: Castro
- first_name: Magdalena
  full_name: Torres, Magdalena
  last_name: Torres
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: José
  full_name: Sánchez-Prieto, José
  last_name: Sánchez Prieto
citation:
  ama: Millán C, Castro E, Torres M, Shigemoto R, Sánchez Prieto J. Co-expression
    of metabotropic glutamate receptor 7 and N-type Ca2+ channels in single cerebrocortical
    nerve terminals of adult rats. <i>Journal of Biological Chemistry</i>. 2003;278(26):23955-23962.
    doi:<a href="https://doi.org/10.1074/jbc.M211471200">10.1074/jbc.M211471200</a>
  apa: Millán, C., Castro, E., Torres, M., Shigemoto, R., &#38; Sánchez Prieto, J.
    (2003). Co-expression of metabotropic glutamate receptor 7 and N-type Ca2+ channels
    in single cerebrocortical nerve terminals of adult rats. <i>Journal of Biological
    Chemistry</i>. American Society for Biochemistry and Molecular Biology. <a href="https://doi.org/10.1074/jbc.M211471200">https://doi.org/10.1074/jbc.M211471200</a>
  chicago: Millán, Carmelo, Enrique Castro, Magdalena Torres, Ryuichi Shigemoto, and
    José Sánchez Prieto. “Co-Expression of Metabotropic Glutamate Receptor 7 and N-Type
    Ca2+ Channels in Single Cerebrocortical Nerve Terminals of Adult Rats.” <i>Journal
    of Biological Chemistry</i>. American Society for Biochemistry and Molecular Biology,
    2003. <a href="https://doi.org/10.1074/jbc.M211471200">https://doi.org/10.1074/jbc.M211471200</a>.
  ieee: C. Millán, E. Castro, M. Torres, R. Shigemoto, and J. Sánchez Prieto, “Co-expression
    of metabotropic glutamate receptor 7 and N-type Ca2+ channels in single cerebrocortical
    nerve terminals of adult rats,” <i>Journal of Biological Chemistry</i>, vol. 278,
    no. 26. American Society for Biochemistry and Molecular Biology, pp. 23955–23962,
    2003.
  ista: Millán C, Castro E, Torres M, Shigemoto R, Sánchez Prieto J. 2003. Co-expression
    of metabotropic glutamate receptor 7 and N-type Ca2+ channels in single cerebrocortical
    nerve terminals of adult rats. Journal of Biological Chemistry. 278(26), 23955–23962.
  mla: Millán, Carmelo, et al. “Co-Expression of Metabotropic Glutamate Receptor 7
    and N-Type Ca2+ Channels in Single Cerebrocortical Nerve Terminals of Adult Rats.”
    <i>Journal of Biological Chemistry</i>, vol. 278, no. 26, American Society for
    Biochemistry and Molecular Biology, 2003, pp. 23955–62, doi:<a href="https://doi.org/10.1074/jbc.M211471200">10.1074/jbc.M211471200</a>.
  short: C. Millán, E. Castro, M. Torres, R. Shigemoto, J. Sánchez Prieto, Journal
    of Biological Chemistry 278 (2003) 23955–23962.
date_created: 2018-12-11T11:58:47Z
date_published: 2003-07-27T00:00:00Z
date_updated: 2021-01-12T06:58:42Z
day: '27'
doi: 10.1074/jbc.M211471200
extern: 1
intvolume: '       278'
issue: '26'
month: '07'
page: 23955 - 23962
publication: Journal of Biological Chemistry
publication_status: published
publisher: American Society for Biochemistry and Molecular Biology
publist_id: '4265'
quality_controlled: 0
status: public
title: Co-expression of metabotropic glutamate receptor 7 and N-type Ca2+ channels
  in single cerebrocortical nerve terminals of adult rats
type: journal_article
volume: 278
year: '2003'
...
---
_id: '2634'
abstract:
- lang: eng
  text: To better understand the role of neurotransmitter receptors in neuronal differentiation
    and maturation a detailed knowledge of their identity, location and function in
    the plasma membrane of specific neuronal populations during development is required.
    Combining pre-embedding immunocytochemistry with cell tracking in embryonic brain
    slice cultures we show that virtually all neurons (∼98%) migrating through the
    lower intermediate zone (LIZ) on their way from the medial ganglionic eminence
    to the cerebral cortex, express GABA BR1. Blockade of GABABRs with a specific
    antagonist, CGP52432, resulted in a concentration-dependent accumulation of these
    tangentially migrating neurons in the ventricular/subventricular zones (VZ/SVZ)
    of the cortex and fewer cells were observed in the cortical plate/marginal zone
    (CP/MZ) and LIZ. Moreover, they had significantly shorter leading processes compared
    with similar migrating cells in control slices. Electrophysiological recording
    in LIZ and CP cells revealed no direct effect of either CGP52432 or the GABABR
    agonist, baclofen, on resting membrane properties suggesting that the effect of
    CGP52432 on migration might be mediated through a metabotropic action or the regulation
    of release of factors controlling migration. These results suggest that GABABRs
    have an important modulatory role in the migration of cortical interneurons.
author:
- first_name: Guillermina
  full_name: López-Bendito, Guillermina
  last_name: López Bendito
- first_name: Rafael
  full_name: Luján, Rafael
  last_name: Luján
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Paul
  full_name: Ganter, Paul
  last_name: Ganter
- first_name: Ole
  full_name: Paulsen, Ole
  last_name: Paulsen
- first_name: Zoltán
  full_name: Molnár, Zoltán
  last_name: Molnár
citation:
  ama: López Bendito G, Luján R, Shigemoto R, Ganter P, Paulsen O, Molnár Z. Blockade
    of GABAB receptors alters the tangential migration of cortical neurons. <i>Cerebral
    Cortex</i>. 2003;13(9):932-942. doi:<a href="https://doi.org/10.1093/cercor/13.9.932">10.1093/cercor/13.9.932</a>
  apa: López Bendito, G., Luján, R., Shigemoto, R., Ganter, P., Paulsen, O., &#38;
    Molnár, Z. (2003). Blockade of GABAB receptors alters the tangential migration
    of cortical neurons. <i>Cerebral Cortex</i>. Oxford University Press. <a href="https://doi.org/10.1093/cercor/13.9.932">https://doi.org/10.1093/cercor/13.9.932</a>
  chicago: López Bendito, Guillermina, Rafael Luján, Ryuichi Shigemoto, Paul Ganter,
    Ole Paulsen, and Zoltán Molnár. “Blockade of GABAB Receptors Alters the Tangential
    Migration of Cortical Neurons.” <i>Cerebral Cortex</i>. Oxford University Press,
    2003. <a href="https://doi.org/10.1093/cercor/13.9.932">https://doi.org/10.1093/cercor/13.9.932</a>.
  ieee: G. López Bendito, R. Luján, R. Shigemoto, P. Ganter, O. Paulsen, and Z. Molnár,
    “Blockade of GABAB receptors alters the tangential migration of cortical neurons,”
    <i>Cerebral Cortex</i>, vol. 13, no. 9. Oxford University Press, pp. 932–942,
    2003.
  ista: López Bendito G, Luján R, Shigemoto R, Ganter P, Paulsen O, Molnár Z. 2003.
    Blockade of GABAB receptors alters the tangential migration of cortical neurons.
    Cerebral Cortex. 13(9), 932–942.
  mla: López Bendito, Guillermina, et al. “Blockade of GABAB Receptors Alters the
    Tangential Migration of Cortical Neurons.” <i>Cerebral Cortex</i>, vol. 13, no.
    9, Oxford University Press, 2003, pp. 932–42, doi:<a href="https://doi.org/10.1093/cercor/13.9.932">10.1093/cercor/13.9.932</a>.
  short: G. López Bendito, R. Luján, R. Shigemoto, P. Ganter, O. Paulsen, Z. Molnár,
    Cerebral Cortex 13 (2003) 932–942.
date_created: 2018-12-11T11:58:47Z
date_published: 2003-09-01T00:00:00Z
date_updated: 2021-01-12T06:58:43Z
day: '01'
doi: 10.1093/cercor/13.9.932
extern: 1
intvolume: '        13'
issue: '9'
month: '09'
page: 932 - 942
publication: Cerebral Cortex
publication_status: published
publisher: Oxford University Press
publist_id: '4264'
quality_controlled: 0
status: public
title: Blockade of GABAB receptors alters the tangential migration of cortical neurons
type: journal_article
volume: 13
year: '2003'
...
---
_id: '2635'
abstract:
- lang: eng
  text: Metabotropic GABAB receptors mediate slow inhibitory effects presynaptically
    and postsynaptically. Using preembedding immunohistochemical methods combined
    with quantitative analysis of GABAB receptor subunit immunoreactivity, this study
    provides a detailed description of the cellular and subcellular localization of
    GABAB1a/b and GABA B2 in the rat hippocampus. At the light microscopic level,
    an overlapping distribution of GABAB1a/b and GABAB2 was revealed in the dendritic
    layers of the hippocampus. In addition, expression of the GABAB1a/b subunit was
    found in somata of CA1 pyramidal cells and of a subset of GABAergic interneurons.
    At the electron microscopic level, immunoreactivity for both subunits was observed
    on presynaptic and, more abundantly, on postsynaptic elements. Presynaptically,
    subunits were mainly detected in the extrasynaptic membrane and occasionally over
    the presynaptic membrane specialization of putative glutamatergic and, to a lesser
    extent, GABAergic axon terminals. Postsynaptically, the majority of GABAB receptor
    subunits were localized to the extrasynaptic plasma membrane of spines and dendritic
    shafts of principal cells and shafts of interneuron dendrites. Quantitative analysis
    revealed enrichment of GABAB1a/b around putative glutamatergic synapses on spines
    and an even distribution on dendritic shafts of pyramidal cells contacted by GABAergic
    boutons. The association of GABAB receptors with glutamatergic synapses at both
    presynaptic and postsynaptic sides indicates their intimate involvement in the
    modulation of glutamatergic neurotransmission. The dominant extrasynaptic localization
    of GABAB receptor subunits suggests that their activation is dependent on spillover
    of GABA requiring simultaneous activity of populations of GABAergic cells as it
    occurs during population oscillations or epileptic seizures.
author:
- first_name: Ákos
  full_name: Kulik, Ákos
  last_name: Kulik
- first_name: Imre
  full_name: Vida, Imre
  last_name: Vida
- first_name: Rafael
  full_name: Luján, Rafael
  last_name: Luján
- first_name: Carola
  full_name: Haas, Carola A
  last_name: Haas
- first_name: Guillermina
  full_name: López-Bendito, Guillermina
  last_name: López Bendito
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Michael
  full_name: Frotscher, Michael
  last_name: Frotscher
citation:
  ama: Kulik Á, Vida I, Luján R, et al. Subcellular Localization of Metabotropic GABAB
    Receptor Subunits GABAB1a/b and GABAB2 in the Rat Hippocampus. <i>Journal of Neuroscience</i>.
    2003;23(35):11026-11035.
  apa: Kulik, Á., Vida, I., Luján, R., Haas, C., López Bendito, G., Shigemoto, R.,
    &#38; Frotscher, M. (2003). Subcellular Localization of Metabotropic GABAB Receptor
    Subunits GABAB1a/b and GABAB2 in the Rat Hippocampus. <i>Journal of Neuroscience</i>.
    Society for Neuroscience.
  chicago: Kulik, Ákos, Imre Vida, Rafael Luján, Carola Haas, Guillermina López Bendito,
    Ryuichi Shigemoto, and Michael Frotscher. “Subcellular Localization of Metabotropic
    GABAB Receptor Subunits GABAB1a/b and GABAB2 in the Rat Hippocampus.” <i>Journal
    of Neuroscience</i>. Society for Neuroscience, 2003.
  ieee: Á. Kulik <i>et al.</i>, “Subcellular Localization of Metabotropic GABAB Receptor
    Subunits GABAB1a/b and GABAB2 in the Rat Hippocampus,” <i>Journal of Neuroscience</i>,
    vol. 23, no. 35. Society for Neuroscience, pp. 11026–11035, 2003.
  ista: Kulik Á, Vida I, Luján R, Haas C, López Bendito G, Shigemoto R, Frotscher
    M. 2003. Subcellular Localization of Metabotropic GABAB Receptor Subunits GABAB1a/b
    and GABAB2 in the Rat Hippocampus. Journal of Neuroscience. 23(35), 11026–11035.
  mla: Kulik, Ákos, et al. “Subcellular Localization of Metabotropic GABAB Receptor
    Subunits GABAB1a/b and GABAB2 in the Rat Hippocampus.” <i>Journal of Neuroscience</i>,
    vol. 23, no. 35, Society for Neuroscience, 2003, pp. 11026–35.
  short: Á. Kulik, I. Vida, R. Luján, C. Haas, G. López Bendito, R. Shigemoto, M.
    Frotscher, Journal of Neuroscience 23 (2003) 11026–11035.
date_created: 2018-12-11T11:58:47Z
date_published: 2003-12-03T00:00:00Z
date_updated: 2021-01-12T06:58:43Z
day: '03'
extern: 1
intvolume: '        23'
issue: '35'
month: '12'
page: 11026 - 11035
publication: Journal of Neuroscience
publication_status: published
publisher: Society for Neuroscience
publist_id: '4263'
quality_controlled: 0
status: public
title: Subcellular Localization of Metabotropic GABAB Receptor Subunits GABAB1a/b
  and GABAB2 in the Rat Hippocampus
type: journal_article
volume: 23
year: '2003'
...
---
_id: '2637'
abstract:
- lang: eng
  text: While the cholinergic depletion in Alzheimer's disease (AD) has been known
    for some time, a definitive involvement of other neurotransmitter systems has
    been somewhat more elusive. Our study demonstrates a clear involvement of both
    glutamatergic and, to a lesser extent, GABAergic neurons in an early onset transgenic
    mouse model of AD-like amyloid pathology. Immunohistochemical staining and subsequent
    quantification has revealed a statistically significant increased density of glutamatergic
    and GABAergic presynaptic boutons in both the plaque free and plaque adjacent
    cortical neuropile areas of transgenic mice as compared to non-transgenic controls.
    Furthermore, amyloid plaque size was shown to have a statistically significant
    effect on the relative area occupied by dystrophic glutamatergic neurites in the
    peri-plaque neuropile. These findings support our hypothesis that the amyloid
    pathology progresses in a time and neurotransmitter specific manner, first in
    the cholinergic system which appears to be most vulnerable, followed by the glutamatergic
    presynaptic boutons and finally the somewhat more resilient GABAergic terminals.
author:
- first_name: Karen
  full_name: Bell, Karen F
  last_name: Bell
- first_name: G J
  full_name: De Kort, G J
  last_name: De Kort
- first_name: S
  full_name: Steggerda, S
  last_name: Steggerda
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Alfredo
  full_name: Ribeiro-da-Silva, Alfredo
  last_name: Ribeiro Da Silva
- first_name: Augusto
  full_name: Cuello, Augusto C
  last_name: Cuello
citation:
  ama: Bell K, De Kort GJ, Steggerda S, Shigemoto R, Ribeiro Da Silva A, Cuello A.
    Structural involvement of the glutamatergic presynaptic boutons in a transgenic
    mouse model expressing early onset amyloid pathology. <i>Neuroscience Letters</i>.
    2003;353(2):143-147. doi:<a href="https://doi.org/10.1016/j.neulet.2003.09.027">10.1016/j.neulet.2003.09.027</a>
  apa: Bell, K., De Kort, G. J., Steggerda, S., Shigemoto, R., Ribeiro Da Silva, A.,
    &#38; Cuello, A. (2003). Structural involvement of the glutamatergic presynaptic
    boutons in a transgenic mouse model expressing early onset amyloid pathology.
    <i>Neuroscience Letters</i>. Elsevier. <a href="https://doi.org/10.1016/j.neulet.2003.09.027">https://doi.org/10.1016/j.neulet.2003.09.027</a>
  chicago: Bell, Karen, G J De Kort, S Steggerda, Ryuichi Shigemoto, Alfredo Ribeiro
    Da Silva, and Augusto Cuello. “Structural Involvement of the Glutamatergic Presynaptic
    Boutons in a Transgenic Mouse Model Expressing Early Onset Amyloid Pathology.”
    <i>Neuroscience Letters</i>. Elsevier, 2003. <a href="https://doi.org/10.1016/j.neulet.2003.09.027">https://doi.org/10.1016/j.neulet.2003.09.027</a>.
  ieee: K. Bell, G. J. De Kort, S. Steggerda, R. Shigemoto, A. Ribeiro Da Silva, and
    A. Cuello, “Structural involvement of the glutamatergic presynaptic boutons in
    a transgenic mouse model expressing early onset amyloid pathology,” <i>Neuroscience
    Letters</i>, vol. 353, no. 2. Elsevier, pp. 143–147, 2003.
  ista: Bell K, De Kort GJ, Steggerda S, Shigemoto R, Ribeiro Da Silva A, Cuello A.
    2003. Structural involvement of the glutamatergic presynaptic boutons in a transgenic
    mouse model expressing early onset amyloid pathology. Neuroscience Letters. 353(2),
    143–147.
  mla: Bell, Karen, et al. “Structural Involvement of the Glutamatergic Presynaptic
    Boutons in a Transgenic Mouse Model Expressing Early Onset Amyloid Pathology.”
    <i>Neuroscience Letters</i>, vol. 353, no. 2, Elsevier, 2003, pp. 143–47, doi:<a
    href="https://doi.org/10.1016/j.neulet.2003.09.027">10.1016/j.neulet.2003.09.027</a>.
  short: K. Bell, G.J. De Kort, S. Steggerda, R. Shigemoto, A. Ribeiro Da Silva, A.
    Cuello, Neuroscience Letters 353 (2003) 143–147.
date_created: 2018-12-11T11:58:48Z
date_published: 2003-12-19T00:00:00Z
date_updated: 2021-01-12T06:58:44Z
day: '19'
doi: 10.1016/j.neulet.2003.09.027
extern: 1
intvolume: '       353'
issue: '2'
month: '12'
page: 143 - 147
publication: Neuroscience Letters
publication_status: published
publisher: Elsevier
publist_id: '4262'
quality_controlled: 0
status: public
title: Structural involvement of the glutamatergic presynaptic boutons in a transgenic
  mouse model expressing early onset amyloid pathology
type: journal_article
volume: 353
year: '2003'
...
---
_id: '2784'
abstract:
- lang: eng
  text: We report the results of an experimental study of magnetohydrodynamic damping
    of sidewall convection in a rectangular enclosure filled with gallium. In particular
    we investigate the suppression of convection when a steady magnetic field is applied
    separately in each of the three principal directions of the flow. The strongest
    damping of the steady flow is found for a vertical magnetic field, which is in
    agreement with theory. However, we observe that the application of a field transverse
    to the flow provides greater damping than a longitudinal one, which seems to contradict
    available theory. We provide a possible resolution of this apparent dichotomy
    in terms of the length scale of the experiment.
author:
- first_name: Björn
  full_name: Björn Hof
  id: 3A374330-F248-11E8-B48F-1D18A9856A87
  last_name: Hof
  orcid: 0000-0003-2057-2754
- first_name: Anne
  full_name: Juel, Anne
  last_name: Juel
- first_name: Tom
  full_name: Mullin, Tom P
  last_name: Mullin
citation:
  ama: Hof B, Juel A, Mullin T. Magnetohydrodynamic damping of convective flows in
    molten gallium. <i>Journal of Fluid Mechanics</i>. 2003;482:163-179. doi:<a href="https://doi.org/10.1017/S0022112003004014">10.1017/S0022112003004014</a>
  apa: Hof, B., Juel, A., &#38; Mullin, T. (2003). Magnetohydrodynamic damping of
    convective flows in molten gallium. <i>Journal of Fluid Mechanics</i>. Cambridge
    University Press. <a href="https://doi.org/10.1017/S0022112003004014">https://doi.org/10.1017/S0022112003004014</a>
  chicago: Hof, Björn, Anne Juel, and Tom Mullin. “Magnetohydrodynamic Damping of
    Convective Flows in Molten Gallium.” <i>Journal of Fluid Mechanics</i>. Cambridge
    University Press, 2003. <a href="https://doi.org/10.1017/S0022112003004014">https://doi.org/10.1017/S0022112003004014</a>.
  ieee: B. Hof, A. Juel, and T. Mullin, “Magnetohydrodynamic damping of convective
    flows in molten gallium,” <i>Journal of Fluid Mechanics</i>, vol. 482. Cambridge
    University Press, pp. 163–179, 2003.
  ista: Hof B, Juel A, Mullin T. 2003. Magnetohydrodynamic damping of convective flows
    in molten gallium. Journal of Fluid Mechanics. 482, 163–179.
  mla: Hof, Björn, et al. “Magnetohydrodynamic Damping of Convective Flows in Molten
    Gallium.” <i>Journal of Fluid Mechanics</i>, vol. 482, Cambridge University Press,
    2003, pp. 163–79, doi:<a href="https://doi.org/10.1017/S0022112003004014">10.1017/S0022112003004014</a>.
  short: B. Hof, A. Juel, T. Mullin, Journal of Fluid Mechanics 482 (2003) 163–179.
date_created: 2018-12-11T11:59:35Z
date_published: 2003-05-13T00:00:00Z
date_updated: 2021-01-12T06:59:42Z
day: '13'
doi: 10.1017/S0022112003004014
extern: 1
intvolume: '       482'
month: '05'
page: 163 - 179
publication: Journal of Fluid Mechanics
publication_status: published
publisher: Cambridge University Press
publist_id: '4105'
quality_controlled: 0
status: public
title: Magnetohydrodynamic damping of convective flows in molten gallium
type: journal_article
volume: 482
year: '2003'
...
---
_id: '2785'
abstract:
- lang: eng
  text: Experimental evidence for the scaling of the finite amplitude of perturbation
    theory required to promote transition in Poiseuille flow was found. The exponent
    is -1 and was uncovered using considerable care in the design and execution of
    the experiment. Interestingly, this exponent was also found in experiments on
    transition in boundary layers.
author:
- first_name: Björn
  full_name: Björn Hof
  id: 3A374330-F248-11E8-B48F-1D18A9856A87
  last_name: Hof
  orcid: 0000-0003-2057-2754
- first_name: Anne
  full_name: Juel, Anne
  last_name: Juel
- first_name: Tom
  full_name: Mullin, Tom P
  last_name: Mullin
citation:
  ama: Hof B, Juel A, Mullin T. Scaling of the turbulence transition threshold in
    a pipe. <i>Physical Review Letters</i>. 2003;91(24):244502/1-244502/4. doi:<a
    href="https://doi.org/10.1103/PhysRevLett.91.244502">10.1103/PhysRevLett.91.244502</a>
  apa: Hof, B., Juel, A., &#38; Mullin, T. (2003). Scaling of the turbulence transition
    threshold in a pipe. <i>Physical Review Letters</i>. American Physical Society.
    <a href="https://doi.org/10.1103/PhysRevLett.91.244502">https://doi.org/10.1103/PhysRevLett.91.244502</a>
  chicago: Hof, Björn, Anne Juel, and Tom Mullin. “Scaling of the Turbulence Transition
    Threshold in a Pipe.” <i>Physical Review Letters</i>. American Physical Society,
    2003. <a href="https://doi.org/10.1103/PhysRevLett.91.244502">https://doi.org/10.1103/PhysRevLett.91.244502</a>.
  ieee: B. Hof, A. Juel, and T. Mullin, “Scaling of the turbulence transition threshold
    in a pipe,” <i>Physical Review Letters</i>, vol. 91, no. 24. American Physical
    Society, p. 244502/1-244502/4, 2003.
  ista: Hof B, Juel A, Mullin T. 2003. Scaling of the turbulence transition threshold
    in a pipe. Physical Review Letters. 91(24), 244502/1-244502/4.
  mla: Hof, Björn, et al. “Scaling of the Turbulence Transition Threshold in a Pipe.”
    <i>Physical Review Letters</i>, vol. 91, no. 24, American Physical Society, 2003,
    p. 244502/1-244502/4, doi:<a href="https://doi.org/10.1103/PhysRevLett.91.244502">10.1103/PhysRevLett.91.244502</a>.
  short: B. Hof, A. Juel, T. Mullin, Physical Review Letters 91 (2003) 244502/1-244502/4.
date_created: 2018-12-11T11:59:35Z
date_published: 2003-12-12T00:00:00Z
date_updated: 2021-01-12T06:59:42Z
day: '12'
doi: 10.1103/PhysRevLett.91.244502
extern: 1
intvolume: '        91'
issue: '24'
month: '12'
page: 244502/1 - 244502/4
publication: Physical Review Letters
publication_status: published
publisher: American Physical Society
publist_id: '4104'
quality_controlled: 0
status: public
title: Scaling of the turbulence transition threshold in a pipe
type: journal_article
volume: 91
year: '2003'
...
---
_id: '2990'
abstract:
- lang: eng
  text: Plant growth is marked by its adaptability to continuous changes in environment.
    A regulated, differential distribution of auxin underlies many adaptation processes
    including organogenesis, meristem patterning and tropisms. In executing its multiple
    roles, auxin displays some characteristics of both a hormone and a morphogen.
    Studies on auxin transport, as well as tracing the intracellular movement of its
    molecular components, have suggested a possible scenario to explain how growth
    plasticity is conferred at the cellular and molecular level. The plant perceives
    stimuli and changes the subcellular position of auxin-transport components accordingly.
    These changes modulate auxin fluxes, and the newly established auxin distribution
    triggers the corresponding developmental response.
author:
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: Friml J. Auxin transport - Shaping the plant. <i>Current Opinion in Plant Biology</i>.
    2003;6(1):7-12. doi:<a href="https://doi.org/10.1016/S1369526602000031">10.1016/S1369526602000031</a>
  apa: Friml, J. (2003). Auxin transport - Shaping the plant. <i>Current Opinion in
    Plant Biology</i>. Elsevier. <a href="https://doi.org/10.1016/S1369526602000031">https://doi.org/10.1016/S1369526602000031</a>
  chicago: Friml, Jiří. “Auxin Transport - Shaping the Plant.” <i>Current Opinion
    in Plant Biology</i>. Elsevier, 2003. <a href="https://doi.org/10.1016/S1369526602000031">https://doi.org/10.1016/S1369526602000031</a>.
  ieee: J. Friml, “Auxin transport - Shaping the plant,” <i>Current Opinion in Plant
    Biology</i>, vol. 6, no. 1. Elsevier, pp. 7–12, 2003.
  ista: Friml J. 2003. Auxin transport - Shaping the plant. Current Opinion in Plant
    Biology. 6(1), 7–12.
  mla: Friml, Jiří. “Auxin Transport - Shaping the Plant.” <i>Current Opinion in Plant
    Biology</i>, vol. 6, no. 1, Elsevier, 2003, pp. 7–12, doi:<a href="https://doi.org/10.1016/S1369526602000031">10.1016/S1369526602000031</a>.
  short: J. Friml, Current Opinion in Plant Biology 6 (2003) 7–12.
date_created: 2018-12-11T12:00:43Z
date_published: 2003-02-01T00:00:00Z
date_updated: 2021-01-12T07:40:17Z
day: '01'
doi: 10.1016/S1369526602000031
extern: '1'
intvolume: '         6'
issue: '1'
language:
- iso: eng
month: '02'
oa_version: None
page: 7 - 12
publication: Current Opinion in Plant Biology
publication_status: published
publisher: Elsevier
publist_id: '3711'
quality_controlled: '1'
status: public
title: Auxin transport - Shaping the plant
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 6
year: '2003'
...
---
_id: '2992'
abstract:
- lang: eng
  text: Plants have many polarized cell types, but relatively little is known about
    the mechanisms that establish polarity. The orc mutant was identified originally
    by defects in root patterning, and positional cloning revealed that the affected
    gene encodes STEROL METHYLTRANSFERASE1, which is required for the appropriate
    synthesis and composition of major membrane sterols. smt1orc mutants displayed
    several conspicuous cell polarity defects. Columella root cap cells revealed perturbed
    polar positioning of different organelles, and in the smt1orc root epidermis,
    polar initiation of root hairs was more randomized. Polar auxin transport and
    expression of the auxin reporter DR5-β-glucuronidase were aberrant in smt1orc.
    Patterning defects in smt1orc resembled those observed in mutants of the PIN gene
    family of putative auxin efflux transporters. Consistently, the membrane localization
    of the PIN1 and PIN3 proteins was disturbed in smt1orc, whereas polar positioning
    of the influx carrier AUX1 appeared normal. Our results suggest that balanced
    sterol composition is a major requirement for cell polarity and auxin efflux in
    Arabidopsis.
author:
- first_name: Viola
  full_name: Willemsen, Viola
  last_name: Willemsen
- first_name: Jirí
  full_name: Jirí Friml
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Markus
  full_name: Grebe, Markus
  last_name: Grebe
- first_name: Albert
  full_name: Van Den Toorn, Albert
  last_name: Van Den Toorn
- first_name: Klaus
  full_name: Palme, Klaus
  last_name: Palme
- first_name: Ben
  full_name: Scheres, Ben
  last_name: Scheres
citation:
  ama: Willemsen V, Friml J, Grebe M, Van Den Toorn A, Palme K, Scheres B. Cell polarity
    and PIN protein positioning in Arabidopsis require STEROL METHYLTRANSFERASE1 function.
    <i>Plant Cell</i>. 2003;15(3):612-625. doi:<a href="https://doi.org/10.1105/tpc.008433">10.1105/tpc.008433</a>
  apa: Willemsen, V., Friml, J., Grebe, M., Van Den Toorn, A., Palme, K., &#38; Scheres,
    B. (2003). Cell polarity and PIN protein positioning in Arabidopsis require STEROL
    METHYLTRANSFERASE1 function. <i>Plant Cell</i>. American Society of Plant Biologists.
    <a href="https://doi.org/10.1105/tpc.008433">https://doi.org/10.1105/tpc.008433</a>
  chicago: Willemsen, Viola, Jiří Friml, Markus Grebe, Albert Van Den Toorn, Klaus
    Palme, and Ben Scheres. “Cell Polarity and PIN Protein Positioning in Arabidopsis
    Require STEROL METHYLTRANSFERASE1 Function.” <i>Plant Cell</i>. American Society
    of Plant Biologists, 2003. <a href="https://doi.org/10.1105/tpc.008433">https://doi.org/10.1105/tpc.008433</a>.
  ieee: V. Willemsen, J. Friml, M. Grebe, A. Van Den Toorn, K. Palme, and B. Scheres,
    “Cell polarity and PIN protein positioning in Arabidopsis require STEROL METHYLTRANSFERASE1
    function,” <i>Plant Cell</i>, vol. 15, no. 3. American Society of Plant Biologists,
    pp. 612–625, 2003.
  ista: Willemsen V, Friml J, Grebe M, Van Den Toorn A, Palme K, Scheres B. 2003.
    Cell polarity and PIN protein positioning in Arabidopsis require STEROL METHYLTRANSFERASE1
    function. Plant Cell. 15(3), 612–625.
  mla: Willemsen, Viola, et al. “Cell Polarity and PIN Protein Positioning in Arabidopsis
    Require STEROL METHYLTRANSFERASE1 Function.” <i>Plant Cell</i>, vol. 15, no. 3,
    American Society of Plant Biologists, 2003, pp. 612–25, doi:<a href="https://doi.org/10.1105/tpc.008433">10.1105/tpc.008433</a>.
  short: V. Willemsen, J. Friml, M. Grebe, A. Van Den Toorn, K. Palme, B. Scheres,
    Plant Cell 15 (2003) 612–625.
date_created: 2018-12-11T12:00:44Z
date_published: 2003-03-01T00:00:00Z
date_updated: 2021-01-12T07:40:18Z
day: '01'
doi: 10.1105/tpc.008433
extern: 1
intvolume: '        15'
issue: '3'
month: '03'
page: 612 - 625
publication: Plant Cell
publication_status: published
publisher: American Society of Plant Biologists
publist_id: '3710'
quality_controlled: 0
status: public
title: Cell polarity and PIN protein positioning in Arabidopsis require STEROL METHYLTRANSFERASE1
  function
type: journal_article
volume: 15
year: '2003'
...
---
_id: '2993'
abstract:
- lang: eng
  text: Plant biology is currently experiencing a growing demand for easy and reliable
    mRNA and protein localisation techniques. Here, we present novel whole mount in
    situ hybridisation and immunolocalisation protocols, suitable to localise mRNAs
    and proteins in Arabidopsis seedlings. We demonstrate that these methods can be
    used in different organs of Arabidopsis seedlings as well as in other plant species.
    In order to achieve better reproducibility and higher throughput, we modified
    these protocols for automation to be performed by a liquid handling robot. In
    addition, we show that other procedures such as reporter enzyme assays and tissue
    clearing can be similarly automated. We present examples of application of our
    protocols including mRNA localisation and proteins and epitope tag (co)localisations
    which demonstrate that these methods provide reliable and versatile tools for
    expression, localisation and anatomical studies in plants.
author:
- first_name: Jirí
  full_name: Jirí Friml
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Eva
  full_name: Eva Benková
  id: 38F4F166-F248-11E8-B48F-1D18A9856A87
  last_name: Benková
  orcid: 0000-0002-8510-9739
- first_name: Ulrike
  full_name: Mayer, Ulrike
  last_name: Mayer
- first_name: Klaus
  full_name: Palme, Klaus
  last_name: Palme
- first_name: Gerhard
  full_name: Muster, Gerhard
  last_name: Muster
citation:
  ama: Friml J, Benková E, Mayer U, Palme K, Muster G. Automated whole mount localisation
    techniques for plant seedlings. <i>Plant Journal</i>. 2003;34(1):115-124. doi:<a
    href="https://doi.org/10.1046/j.1365-313X.2003.01705.x">10.1046/j.1365-313X.2003.01705.x</a>
  apa: Friml, J., Benková, E., Mayer, U., Palme, K., &#38; Muster, G. (2003). Automated
    whole mount localisation techniques for plant seedlings. <i>Plant Journal</i>.
    Wiley-Blackwell. <a href="https://doi.org/10.1046/j.1365-313X.2003.01705.x">https://doi.org/10.1046/j.1365-313X.2003.01705.x</a>
  chicago: Friml, Jiří, Eva Benková, Ulrike Mayer, Klaus Palme, and Gerhard Muster.
    “Automated Whole Mount Localisation Techniques for Plant Seedlings.” <i>Plant
    Journal</i>. Wiley-Blackwell, 2003. <a href="https://doi.org/10.1046/j.1365-313X.2003.01705.x">https://doi.org/10.1046/j.1365-313X.2003.01705.x</a>.
  ieee: J. Friml, E. Benková, U. Mayer, K. Palme, and G. Muster, “Automated whole
    mount localisation techniques for plant seedlings,” <i>Plant Journal</i>, vol.
    34, no. 1. Wiley-Blackwell, pp. 115–124, 2003.
  ista: Friml J, Benková E, Mayer U, Palme K, Muster G. 2003. Automated whole mount
    localisation techniques for plant seedlings. Plant Journal. 34(1), 115–124.
  mla: Friml, Jiří, et al. “Automated Whole Mount Localisation Techniques for Plant
    Seedlings.” <i>Plant Journal</i>, vol. 34, no. 1, Wiley-Blackwell, 2003, pp. 115–24,
    doi:<a href="https://doi.org/10.1046/j.1365-313X.2003.01705.x">10.1046/j.1365-313X.2003.01705.x</a>.
  short: J. Friml, E. Benková, U. Mayer, K. Palme, G. Muster, Plant Journal 34 (2003)
    115–124.
date_created: 2018-12-11T12:00:44Z
date_published: 2003-04-01T00:00:00Z
date_updated: 2021-01-12T07:40:18Z
day: '01'
doi: 10.1046/j.1365-313X.2003.01705.x
extern: 1
intvolume: '        34'
issue: '1'
month: '04'
page: 115 - 124
publication: Plant Journal
publication_status: published
publisher: Wiley-Blackwell
publist_id: '3709'
quality_controlled: 0
status: public
title: Automated whole mount localisation techniques for plant seedlings
type: journal_article
volume: 34
year: '2003'
...
---
_id: '2994'
abstract:
- lang: eng
  text: The regular arrangement of leaves around a plant's stem, called phyllotaxis,
    has for centuries attracted the attention of philosophers, mathematicians and
    natural scientists; however, to date, studies of phyllotaxis have been largely
    theoretical. Leaves and flowers are formed from the shoot apical meristem, triggered
    by the plant hormone auxin. Auxin is transported through plant tissues by specific
    cellular influx and efflux carrier proteins. Here we show that proteins involved
    in auxin transport regulate phyllotaxis. Our data indicate that auxin is transported
    upwards into the meristem through the epidermis and the outermost meristem cell
    layer. Existing leaf primordia act as sinks, redistributing auxin and creating
    its heterogeneous distribution in the meristem. Auxin accumulation occurs only
    at certain minimal distances from existing primordia, defining the position of
    future primordia. This model for phyllotaxis accounts for its reiterative nature,
    as well as its regularity and stability.
author:
- first_name: Didier
  full_name: Reinhardt, Didier
  last_name: Reinhardt
- first_name: Eva
  full_name: Pesce, Eva-Rachele
  last_name: Pesce
- first_name: Pia
  full_name: Stieger, Pia
  last_name: Stieger
- first_name: Therese
  full_name: Mandel, Therese
  last_name: Mandel
- first_name: Kurt
  full_name: Baltensperger, Kurt
  last_name: Baltensperger
- first_name: Malcolm
  full_name: Bennett, Malcolm
  last_name: Bennett
- first_name: Jan
  full_name: Traas, Jan
  last_name: Traas
- first_name: Jirí
  full_name: Jirí Friml
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Cris
  full_name: Kuhlemeier, Cris
  last_name: Kuhlemeier
citation:
  ama: Reinhardt D, Pesce E, Stieger P, et al. Regulation of phyllotaxis by polar
    auxin transport. <i>Nature</i>. 2003;426(6964):255-260. doi:<a href="https://doi.org/10.1038/nature02081">10.1038/nature02081</a>
  apa: Reinhardt, D., Pesce, E., Stieger, P., Mandel, T., Baltensperger, K., Bennett,
    M., … Kuhlemeier, C. (2003). Regulation of phyllotaxis by polar auxin transport.
    <i>Nature</i>. Nature Publishing Group. <a href="https://doi.org/10.1038/nature02081">https://doi.org/10.1038/nature02081</a>
  chicago: Reinhardt, Didier, Eva Pesce, Pia Stieger, Therese Mandel, Kurt Baltensperger,
    Malcolm Bennett, Jan Traas, Jiří Friml, and Cris Kuhlemeier. “Regulation of Phyllotaxis
    by Polar Auxin Transport.” <i>Nature</i>. Nature Publishing Group, 2003. <a href="https://doi.org/10.1038/nature02081">https://doi.org/10.1038/nature02081</a>.
  ieee: D. Reinhardt <i>et al.</i>, “Regulation of phyllotaxis by polar auxin transport,”
    <i>Nature</i>, vol. 426, no. 6964. Nature Publishing Group, pp. 255–260, 2003.
  ista: Reinhardt D, Pesce E, Stieger P, Mandel T, Baltensperger K, Bennett M, Traas
    J, Friml J, Kuhlemeier C. 2003. Regulation of phyllotaxis by polar auxin transport.
    Nature. 426(6964), 255–260.
  mla: Reinhardt, Didier, et al. “Regulation of Phyllotaxis by Polar Auxin Transport.”
    <i>Nature</i>, vol. 426, no. 6964, Nature Publishing Group, 2003, pp. 255–60,
    doi:<a href="https://doi.org/10.1038/nature02081">10.1038/nature02081</a>.
  short: D. Reinhardt, E. Pesce, P. Stieger, T. Mandel, K. Baltensperger, M. Bennett,
    J. Traas, J. Friml, C. Kuhlemeier, Nature 426 (2003) 255–260.
date_created: 2018-12-11T12:00:45Z
date_published: 2003-11-20T00:00:00Z
date_updated: 2021-01-12T07:40:18Z
day: '20'
doi: 10.1038/nature02081
extern: 1
intvolume: '       426'
issue: '6964'
month: '11'
page: 255 - 260
publication: Nature
publication_status: published
publisher: Nature Publishing Group
publist_id: '3707'
quality_controlled: 0
status: public
title: Regulation of phyllotaxis by polar auxin transport
type: journal_article
volume: 426
year: '2003'
...
---
_id: '2995'
abstract:
- lang: eng
  text: |
    Axis formation occurs in plants, as in animals, during early embryogenesis. However, the underlying mechanism is not known. Here we show that the first manifestation of the apical-basal axis in plants, the asymmetric division of the zygote, produces a basal cell that transports and an apical cell that responds to the signalling molecule auxin. This apical-basal auxin activity gradient triggers the specification of apical embryo structures and is actively maintained by a novel component of auxin efflux, PIN7, which is located apically in the basal cell. Later, the developmentally regulated reversal of PIN7 and onset of PIN1 polar localization reorganize the auxin gradient for specification of the basal root pole. An analysis of pin quadruple mutants identifies PIN-dependent transport as an essential part of the mechanism for embryo axis formation. Our results indicate how the establishment of cell polarity, polar auxin efflux and local auxin response result in apical-basal axis formation of the embryo, and thus determine the axiality of the adult plant.
author:
- first_name: Jirí
  full_name: Jirí Friml
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Anne
  full_name: Vieten, Anne
  last_name: Vieten
- first_name: Michael
  full_name: Sauer, Michael
  last_name: Sauer
- first_name: Dolf
  full_name: Weijers, Dolf
  last_name: Weijers
- first_name: Heinz
  full_name: Schwarz, Heinz
  last_name: Schwarz
- first_name: Thorsten
  full_name: Hamann, Thorsten
  last_name: Hamann
- first_name: Remko
  full_name: Offringa, Remko
  last_name: Offringa
- first_name: Gerd
  full_name: Jürgens, Gerd
  last_name: Jürgens
citation:
  ama: Friml J, Vieten A, Sauer M, et al. Efflux dependent auxin gradients establish
    the apical basal axis of Arabidopsis. <i>Nature</i>. 2003;426(6963):147-153. doi:<a
    href="https://doi.org/10.1038/nature02085">10.1038/nature02085</a>
  apa: Friml, J., Vieten, A., Sauer, M., Weijers, D., Schwarz, H., Hamann, T., … Jürgens,
    G. (2003). Efflux dependent auxin gradients establish the apical basal axis of
    Arabidopsis. <i>Nature</i>. Nature Publishing Group. <a href="https://doi.org/10.1038/nature02085">https://doi.org/10.1038/nature02085</a>
  chicago: Friml, Jiří, Anne Vieten, Michael Sauer, Dolf Weijers, Heinz Schwarz, Thorsten
    Hamann, Remko Offringa, and Gerd Jürgens. “Efflux Dependent Auxin Gradients Establish
    the Apical Basal Axis of Arabidopsis.” <i>Nature</i>. Nature Publishing Group,
    2003. <a href="https://doi.org/10.1038/nature02085">https://doi.org/10.1038/nature02085</a>.
  ieee: J. Friml <i>et al.</i>, “Efflux dependent auxin gradients establish the apical
    basal axis of Arabidopsis,” <i>Nature</i>, vol. 426, no. 6963. Nature Publishing
    Group, pp. 147–153, 2003.
  ista: Friml J, Vieten A, Sauer M, Weijers D, Schwarz H, Hamann T, Offringa R, Jürgens
    G. 2003. Efflux dependent auxin gradients establish the apical basal axis of Arabidopsis.
    Nature. 426(6963), 147–153.
  mla: Friml, Jiří, et al. “Efflux Dependent Auxin Gradients Establish the Apical
    Basal Axis of Arabidopsis.” <i>Nature</i>, vol. 426, no. 6963, Nature Publishing
    Group, 2003, pp. 147–53, doi:<a href="https://doi.org/10.1038/nature02085">10.1038/nature02085</a>.
  short: J. Friml, A. Vieten, M. Sauer, D. Weijers, H. Schwarz, T. Hamann, R. Offringa,
    G. Jürgens, Nature 426 (2003) 147–153.
date_created: 2018-12-11T12:00:45Z
date_published: 2003-11-13T00:00:00Z
date_updated: 2021-01-12T07:40:19Z
day: '13'
doi: 10.1038/nature02085
extern: 1
intvolume: '       426'
issue: '6963'
month: '11'
page: 147 - 153
publication: Nature
publication_status: published
publisher: Nature Publishing Group
publist_id: '3708'
quality_controlled: 0
status: public
title: Efflux dependent auxin gradients establish the apical basal axis of Arabidopsis
type: journal_article
volume: 426
year: '2003'
...
---
_id: '2996'
abstract:
- lang: eng
  text: |
    Plants, compared to animals, exhibit an amazing adaptability and plasticity in their development. This is largely dependent on the ability of plants to form new organs, such as lateral roots, leaves, and flowers during postembryonic development. Organ primordia develop from founder cell populations into organs by coordinated cell division and differentiation. Here, we show that organ formation in Arabidopsis involves dynamic gradients of the signaling molecule auxin with maxima at the primordia tips. These gradients are mediated by cellular efflux requiring asymmetrically localized PIN proteins, which represent a functionally redundant network for auxin distribution in both aerial and underground organs. PIN1 polar localization undergoes a dynamic rearrangement, which correlates with establishment of auxin gradients and primordium development. Our results suggest that PIN-dependent, local auxin gradients represent a common module for formation of all plant organs, regardless of their mature morphology or developmental origin.
author:
- first_name: Eva
  full_name: Eva Benková
  id: 38F4F166-F248-11E8-B48F-1D18A9856A87
  last_name: Benková
  orcid: 0000-0002-8510-9739
- first_name: Marta
  full_name: Michniewicz, Marta
  last_name: Michniewicz
- first_name: Michael
  full_name: Sauer, Michael
  last_name: Sauer
- first_name: Thomas
  full_name: Teichmann, Thomas
  last_name: Teichmann
- first_name: Daniela
  full_name: Seifertová, Daniela
  last_name: Seifertová
- first_name: Gerd
  full_name: Jürgens, Gerd
  last_name: Jürgens
- first_name: Jirí
  full_name: Jirí Friml
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: Benková E, Michniewicz M, Sauer M, et al. Local, efflux-dependent auxin gradients
    as a common module for plant organ formation. <i>Cell</i>. 2003;115(5):591-602.
    doi:<a href="https://doi.org/10.1016/S0092-8674(03)00924-3">10.1016/S0092-8674(03)00924-3</a>
  apa: Benková, E., Michniewicz, M., Sauer, M., Teichmann, T., Seifertová, D., Jürgens,
    G., &#38; Friml, J. (2003). Local, efflux-dependent auxin gradients as a common
    module for plant organ formation. <i>Cell</i>. Cell Press. <a href="https://doi.org/10.1016/S0092-8674(03)00924-3">https://doi.org/10.1016/S0092-8674(03)00924-3</a>
  chicago: Benková, Eva, Marta Michniewicz, Michael Sauer, Thomas Teichmann, Daniela
    Seifertová, Gerd Jürgens, and Jiří Friml. “Local, Efflux-Dependent Auxin Gradients
    as a Common Module for Plant Organ Formation.” <i>Cell</i>. Cell Press, 2003.
    <a href="https://doi.org/10.1016/S0092-8674(03)00924-3">https://doi.org/10.1016/S0092-8674(03)00924-3</a>.
  ieee: E. Benková <i>et al.</i>, “Local, efflux-dependent auxin gradients as a common
    module for plant organ formation,” <i>Cell</i>, vol. 115, no. 5. Cell Press, pp.
    591–602, 2003.
  ista: Benková E, Michniewicz M, Sauer M, Teichmann T, Seifertová D, Jürgens G, Friml
    J. 2003. Local, efflux-dependent auxin gradients as a common module for plant
    organ formation. Cell. 115(5), 591–602.
  mla: Benková, Eva, et al. “Local, Efflux-Dependent Auxin Gradients as a Common Module
    for Plant Organ Formation.” <i>Cell</i>, vol. 115, no. 5, Cell Press, 2003, pp.
    591–602, doi:<a href="https://doi.org/10.1016/S0092-8674(03)00924-3">10.1016/S0092-8674(03)00924-3</a>.
  short: E. Benková, M. Michniewicz, M. Sauer, T. Teichmann, D. Seifertová, G. Jürgens,
    J. Friml, Cell 115 (2003) 591–602.
date_created: 2018-12-11T12:00:46Z
date_published: 2003-11-26T00:00:00Z
date_updated: 2021-01-12T07:40:19Z
day: '26'
doi: 10.1016/S0092-8674(03)00924-3
extern: 1
intvolume: '       115'
issue: '5'
month: '11'
page: 591 - 602
publication: Cell
publication_status: published
publisher: Cell Press
publist_id: '3706'
quality_controlled: 0
status: public
title: Local, efflux-dependent auxin gradients as a common module for plant organ
  formation
type: journal_article
volume: 115
year: '2003'
...
---
_id: '3139'
abstract:
- lang: eng
  text: Significant advances have been made during the past few years in our understanding
    of how the spinal monosynaptic reflex develops. Transcription factors in the Neurogenin,
    Runt, ETS, and LIM families control sequential steps of the specification of various
    subtypes of dorsal root ganglia sensory neurons. The initiation of muscle spindle
    differentiation requires neuregulin 1, derived from Ia afferent sensory neurons,
    and signaling through ErbB receptors in intrafusal muscle fibers. Several retrograde
    signals from the periphery are important for the establishment of late connectivity
    in the reflex circuit. Finally, neurotrophin 3 released from muscle spindles regulates
    the strength of sensory-motor connections within the spinal cord postnatally.
author:
- first_name: Hsiao
  full_name: Chen, Hsiao Huei
  last_name: Chen
- first_name: Simon
  full_name: Simon Hippenmeyer
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
- first_name: Silvia
  full_name: Arber, Silvia
  last_name: Arber
- first_name: Eric
  full_name: Frank, Eric
  last_name: Frank
citation:
  ama: Chen H, Hippenmeyer S, Arber S, Frank E. Development of the monosynaptic stretch
    reflex circuit. <i>Current Opinion in Neurobiology</i>. 2003;13(1):96-102. doi:<a
    href="https://doi.org/10.1016/S0959-4388(03)00006-0">10.1016/S0959-4388(03)00006-0</a>
  apa: Chen, H., Hippenmeyer, S., Arber, S., &#38; Frank, E. (2003). Development of
    the monosynaptic stretch reflex circuit. <i>Current Opinion in Neurobiology</i>.
    Elsevier. <a href="https://doi.org/10.1016/S0959-4388(03)00006-0">https://doi.org/10.1016/S0959-4388(03)00006-0</a>
  chicago: Chen, Hsiao, Simon Hippenmeyer, Silvia Arber, and Eric Frank. “Development
    of the Monosynaptic Stretch Reflex Circuit.” <i>Current Opinion in Neurobiology</i>.
    Elsevier, 2003. <a href="https://doi.org/10.1016/S0959-4388(03)00006-0">https://doi.org/10.1016/S0959-4388(03)00006-0</a>.
  ieee: H. Chen, S. Hippenmeyer, S. Arber, and E. Frank, “Development of the monosynaptic
    stretch reflex circuit,” <i>Current Opinion in Neurobiology</i>, vol. 13, no.
    1. Elsevier, pp. 96–102, 2003.
  ista: Chen H, Hippenmeyer S, Arber S, Frank E. 2003. Development of the monosynaptic
    stretch reflex circuit. Current Opinion in Neurobiology. 13(1), 96–102.
  mla: Chen, Hsiao, et al. “Development of the Monosynaptic Stretch Reflex Circuit.”
    <i>Current Opinion in Neurobiology</i>, vol. 13, no. 1, Elsevier, 2003, pp. 96–102,
    doi:<a href="https://doi.org/10.1016/S0959-4388(03)00006-0">10.1016/S0959-4388(03)00006-0</a>.
  short: H. Chen, S. Hippenmeyer, S. Arber, E. Frank, Current Opinion in Neurobiology
    13 (2003) 96–102.
date_created: 2018-12-11T12:01:37Z
date_published: 2003-02-01T00:00:00Z
date_updated: 2019-04-26T07:22:24Z
day: '01'
doi: 10.1016/S0959-4388(03)00006-0
extern: 1
intvolume: '        13'
issue: '1'
month: '02'
page: 96 - 102
publication: Current Opinion in Neurobiology
publication_status: published
publisher: Elsevier
publist_id: '3557'
quality_controlled: 0
status: public
title: Development of the monosynaptic stretch reflex circuit
type: review
volume: 13
year: '2003'
...
---
_id: '3150'
abstract:
- lang: eng
  text: Tripartite G-protein-coupled receptors (GPCRs) represent one of the largest
    groups of signal transducers, transmitting signals from hormones, neuropeptides,
    odorants, food and light. Ligand-bound receptors catalyse GDP/GTP exchange on
    the G-protein α-subunit (Gα), leading to α-GTP separation from the βγ subunits
    and pathway activation. Activating mutations in the receptors or G proteins underlie
    many human diseases, including some cancers, dwarfism and premature puberty. Regulators
    of G-protein signalling (RGS proteins) are known to modulate the level and duration
    of ligand-induced signalling by accelerating the intrinsic GTPase activity of
    the Gα subunit, and thus reformation of the inactive GDP-bound Gα. Here we find
    that even in the absence of receptor, mutation of the RGS family member Sst2 (refs
    6-9) permits spontaneous activation of the G-protein-coupled mating pathway in
    Saccharomyces cerevisiae at levels normally seen only in the presence of ligand.
    Our work demonstrates the occurence of spontaneous tripartite G-protein signalling
    in vivo and identifies a requirement for RGS proteins in preventing such receptor-independent
    activation.
author:
- first_name: Daria E
  full_name: Daria Siekhaus
  id: 3D224B9E-F248-11E8-B48F-1D18A9856A87
  last_name: Siekhaus
  orcid: 0000-0001-8323-8353
- first_name: David
  full_name: Drubin, David G
  last_name: Drubin
citation:
  ama: Siekhaus DE, Drubin D. Spontaneous receptor-independent heterotrimeric G-protein
    signalling in an RGS mutant. <i>Nature Cell Biology</i>. 2003;5(3):231-235. doi:<a
    href="https://doi.org/10.1038/ncb941">10.1038/ncb941</a>
  apa: Siekhaus, D. E., &#38; Drubin, D. (2003). Spontaneous receptor-independent
    heterotrimeric G-protein signalling in an RGS mutant. <i>Nature Cell Biology</i>.
    Nature Publishing Group. <a href="https://doi.org/10.1038/ncb941">https://doi.org/10.1038/ncb941</a>
  chicago: Siekhaus, Daria E, and David Drubin. “Spontaneous Receptor-Independent
    Heterotrimeric G-Protein Signalling in an RGS Mutant.” <i>Nature Cell Biology</i>.
    Nature Publishing Group, 2003. <a href="https://doi.org/10.1038/ncb941">https://doi.org/10.1038/ncb941</a>.
  ieee: D. E. Siekhaus and D. Drubin, “Spontaneous receptor-independent heterotrimeric
    G-protein signalling in an RGS mutant,” <i>Nature Cell Biology</i>, vol. 5, no.
    3. Nature Publishing Group, pp. 231–235, 2003.
  ista: Siekhaus DE, Drubin D. 2003. Spontaneous receptor-independent heterotrimeric
    G-protein signalling in an RGS mutant. Nature Cell Biology. 5(3), 231–235.
  mla: Siekhaus, Daria E., and David Drubin. “Spontaneous Receptor-Independent Heterotrimeric
    G-Protein Signalling in an RGS Mutant.” <i>Nature Cell Biology</i>, vol. 5, no.
    3, Nature Publishing Group, 2003, pp. 231–35, doi:<a href="https://doi.org/10.1038/ncb941">10.1038/ncb941</a>.
  short: D.E. Siekhaus, D. Drubin, Nature Cell Biology 5 (2003) 231–235.
date_created: 2018-12-11T12:01:41Z
date_published: 2003-03-01T00:00:00Z
date_updated: 2021-01-12T07:41:24Z
day: '01'
doi: 10.1038/ncb941
extern: 1
intvolume: '         5'
issue: '3'
month: '03'
page: 231 - 235
publication: Nature Cell Biology
publication_status: published
publisher: Nature Publishing Group
publist_id: '3544'
quality_controlled: 0
status: public
title: Spontaneous receptor-independent heterotrimeric G-protein signalling in an
  RGS mutant
type: journal_article
volume: 5
year: '2003'
...
---
_id: '3151'
abstract:
- lang: eng
  text: Biosynthesis of most peptide hormones and neuropeptides requires proteolytic
    excision of the active peptide from inactive proprotein precursors, an activity
    carried out by subtilisin-like proprotein convertases (SPCs) in constitutive or
    regulated secretory pathways. The Drosophila amontillado (amon) gene encodes a
    homolog of the mammalian PC2 protein, an SPC that functions in the regulated secretory
    pathway in neuroendocrine tissues. We have identified amon mutants by isolating
    ethylmethanesulfonate (EMS)-induced lethal and visible mutations that define two
    complementation groups in the amon interval at 97D1 of the third chromosome. DNA
    sequencing identified the amon complementation group and the DNA sequence change
    for each of the nine amon alleles isolated. amon mutants display partial embryonic
    lethality, are defective in larval growth, and arrest during the first to second
    instar larval molt. Mutant larvae can be rescued by heat-shock-induced expression
    of the amon protein. Rescued larvae arrest at the subsequent larval molt, suggesting
    that amon is also required for the second to third instar larval molt. Our data
    indicate that the amon proprotein convertase is required during embryogenesis
    and larval development in Drosophila and support the hypothesis that AMON acts
    to proteolytically process peptide hormones that regulate hatching, larval growth,
    and larval ecdysis.
author:
- first_name: Lowell
  full_name: Rayburn, Lowell Y
  last_name: Rayburn
- first_name: Holly
  full_name: Gooding, Holly C
  last_name: Gooding
- first_name: Semil
  full_name: Choksi, Semil P
  last_name: Choksi
- first_name: Dhea
  full_name: Maloney, Dhea
  last_name: Maloney
- first_name: Ambrose
  full_name: Kidd, Ambrose R
  last_name: Kidd
- first_name: Daria E
  full_name: Daria Siekhaus
  id: 3D224B9E-F248-11E8-B48F-1D18A9856A87
  last_name: Siekhaus
  orcid: 0000-0001-8323-8353
- first_name: Michael
  full_name: Bender, Michael
  last_name: Bender
citation:
  ama: Rayburn L, Gooding H, Choksi S, et al. Amontillado, the Drosophila homolog
    of the prohormone processing protease PC2, is required during embryogenesis and
    early larval development. <i>Genetics</i>. 2003;163(1):227-237.
  apa: Rayburn, L., Gooding, H., Choksi, S., Maloney, D., Kidd, A., Siekhaus, D. E.,
    &#38; Bender, M. (2003). Amontillado, the Drosophila homolog of the prohormone
    processing protease PC2, is required during embryogenesis and early larval development.
    <i>Genetics</i>. Genetics Society of America.
  chicago: Rayburn, Lowell, Holly Gooding, Semil Choksi, Dhea Maloney, Ambrose Kidd,
    Daria E Siekhaus, and Michael Bender. “Amontillado, the Drosophila Homolog of
    the Prohormone Processing Protease PC2, Is Required during Embryogenesis and Early
    Larval Development.” <i>Genetics</i>. Genetics Society of America, 2003.
  ieee: L. Rayburn <i>et al.</i>, “Amontillado, the Drosophila homolog of the prohormone
    processing protease PC2, is required during embryogenesis and early larval development,”
    <i>Genetics</i>, vol. 163, no. 1. Genetics Society of America, pp. 227–237, 2003.
  ista: Rayburn L, Gooding H, Choksi S, Maloney D, Kidd A, Siekhaus DE, Bender M.
    2003. Amontillado, the Drosophila homolog of the prohormone processing protease
    PC2, is required during embryogenesis and early larval development. Genetics.
    163(1), 227–237.
  mla: Rayburn, Lowell, et al. “Amontillado, the Drosophila Homolog of the Prohormone
    Processing Protease PC2, Is Required during Embryogenesis and Early Larval Development.”
    <i>Genetics</i>, vol. 163, no. 1, Genetics Society of America, 2003, pp. 227–37.
  short: L. Rayburn, H. Gooding, S. Choksi, D. Maloney, A. Kidd, D.E. Siekhaus, M.
    Bender, Genetics 163 (2003) 227–237.
date_created: 2018-12-11T12:01:41Z
date_published: 2003-01-01T00:00:00Z
date_updated: 2021-01-12T07:41:25Z
day: '01'
extern: 1
intvolume: '       163'
issue: '1'
month: '01'
page: 227 - 237
publication: Genetics
publication_status: published
publisher: Genetics Society of America
publist_id: '3545'
quality_controlled: 0
status: public
title: Amontillado, the Drosophila homolog of the prohormone processing protease PC2,
  is required during embryogenesis and early larval development
type: journal_article
volume: 163
year: '2003'
...
---
_id: '3170'
abstract:
- lang: eng
  text: Geodesic active contours and graph cuts are two standard image segmentation
    techniques. We introduce a new segmentation method combining some of their benefits.
    Our main intuition is that any cut on a graph embedded in some continuous space
    can be interpreted as a contour (in 2D) or a surface (in 3D). We show how to build
    a grid graph and set its edge weights so that the cost of cuts is arbitrarily
    close to the length (area) of the corresponding contours (surfaces) for any anisotropic
    Riemannian metric. There are two interesting consequences of this technical result.
    First, graph cut algorithms can be used to find globally minimum geodesic contours
    (minimal surfaces in 3D) under arbitrary Riemannian metric for a given set of
    boundary conditions. Second, we show how to minimize metrication artifacts in
    existing graph-cut based methods in vision. Theoretically speaking, our work provides
    an interesting link between several branches of mathematics -differential geometry,
    integral geometry, and combinatorial optimization. The main technical problem
    is solved using Cauchy-Crofton formula from integral geometry.
author:
- first_name: Yuri
  full_name: Boykov, Yuri
  last_name: Boykov
- first_name: Vladimir
  full_name: Vladimir Kolmogorov
  id: 3D50B0BA-F248-11E8-B48F-1D18A9856A87
  last_name: Kolmogorov
citation:
  ama: 'Boykov Y, Kolmogorov V. Computing geodesics and minimal surfaces via graph
    cuts. In: Vol 1. IEEE; 2003:26-33. doi:<a href="https://doi.org/10.1109/ICCV.2003.1238310">10.1109/ICCV.2003.1238310</a>'
  apa: 'Boykov, Y., &#38; Kolmogorov, V. (2003). Computing geodesics and minimal surfaces
    via graph cuts (Vol. 1, pp. 26–33). Presented at the ICCV: International Conference
    on Computer Vision, IEEE. <a href="https://doi.org/10.1109/ICCV.2003.1238310">https://doi.org/10.1109/ICCV.2003.1238310</a>'
  chicago: Boykov, Yuri, and Vladimir Kolmogorov. “Computing Geodesics and Minimal
    Surfaces via Graph Cuts,” 1:26–33. IEEE, 2003. <a href="https://doi.org/10.1109/ICCV.2003.1238310">https://doi.org/10.1109/ICCV.2003.1238310</a>.
  ieee: 'Y. Boykov and V. Kolmogorov, “Computing geodesics and minimal surfaces via
    graph cuts,” presented at the ICCV: International Conference on Computer Vision,
    2003, vol. 1, pp. 26–33.'
  ista: 'Boykov Y, Kolmogorov V. 2003. Computing geodesics and minimal surfaces via
    graph cuts. ICCV: International Conference on Computer Vision vol. 1, 26–33.'
  mla: Boykov, Yuri, and Vladimir Kolmogorov. <i>Computing Geodesics and Minimal Surfaces
    via Graph Cuts</i>. Vol. 1, IEEE, 2003, pp. 26–33, doi:<a href="https://doi.org/10.1109/ICCV.2003.1238310">10.1109/ICCV.2003.1238310</a>.
  short: Y. Boykov, V. Kolmogorov, in:, IEEE, 2003, pp. 26–33.
conference:
  name: 'ICCV: International Conference on Computer Vision'
date_created: 2018-12-11T12:01:48Z
date_published: 2003-09-30T00:00:00Z
date_updated: 2021-01-12T07:41:33Z
day: '30'
doi: 10.1109/ICCV.2003.1238310
extern: 1
intvolume: '         1'
month: '09'
page: 26 - 33
publication_status: published
publisher: IEEE
publist_id: '3511'
quality_controlled: 0
status: public
title: Computing geodesics and minimal surfaces via graph cuts
type: conference
volume: 1
year: '2003'
...
---
_id: '3171'
abstract:
- lang: eng
  text: 'Reconstructing a 3-D scene from more than one camera is a classical problem
    in computer vision. One of the major sources of difficulty is the fact that not
    all scene elements are visible from all cameras. In the last few years, two promising
    approaches have been developed 11,12 that formulate the scene reconstruction problem
    in terms of energy minimization, and minimize the energy using graph cuts. These
    energy minimization approaches treat the input images symmetrically, handle visibility
    constraints correctly, and allow spatial smoothness to be enforced. However, these
    algorithm propose different problem formulations, and handle a limited class of
    smoothness terms. One algorithm 11 uses a problem formulation that is restricted
    to two-camera stereo, and imposes smoothness between a pair of cameras. The other
    algorithm 12 can handle an arbitrary number of cameras, but imposes smoothness
    only with respect to a single camera. In this paper we give a more general energy
    minimization formulation for the problem, which allows a larger class of spatial
    smoothness constraints. We show that our formulation includes both of the previous
    approaches as special cases, as well as permitting new energy functions. Experimental
    results on real data with ground truth are also included. '
alternative_title:
- LNCS
author:
- first_name: Vladimir
  full_name: Vladimir Kolmogorov
  id: 3D50B0BA-F248-11E8-B48F-1D18A9856A87
  last_name: Kolmogorov
- first_name: Ramin
  full_name: Zabih, Ramin
  last_name: Zabih
- first_name: Steven
  full_name: Gortler, Steven
  last_name: Gortler
citation:
  ama: 'Kolmogorov V, Zabih R, Gortler S. Generalized multi camera scene reconstruction
    using graph cuts. In: Vol 2683. Springer; 2003:501-516. doi:<a href="https://doi.org/10.1007/978-3-540-45063-4_32">10.1007/978-3-540-45063-4_32</a>'
  apa: 'Kolmogorov, V., Zabih, R., &#38; Gortler, S. (2003). Generalized multi camera
    scene reconstruction using graph cuts (Vol. 2683, pp. 501–516). Presented at the
    EMMCVPR: Energy Minimization Methods in Computer Vision and Pattern Recognition,
    Springer. <a href="https://doi.org/10.1007/978-3-540-45063-4_32">https://doi.org/10.1007/978-3-540-45063-4_32</a>'
  chicago: Kolmogorov, Vladimir, Ramin Zabih, and Steven Gortler. “Generalized Multi
    Camera Scene Reconstruction Using Graph Cuts,” 2683:501–16. Springer, 2003. <a
    href="https://doi.org/10.1007/978-3-540-45063-4_32">https://doi.org/10.1007/978-3-540-45063-4_32</a>.
  ieee: 'V. Kolmogorov, R. Zabih, and S. Gortler, “Generalized multi camera scene
    reconstruction using graph cuts,” presented at the EMMCVPR: Energy Minimization
    Methods in Computer Vision and Pattern Recognition, 2003, vol. 2683, pp. 501–516.'
  ista: 'Kolmogorov V, Zabih R, Gortler S. 2003. Generalized multi camera scene reconstruction
    using graph cuts. EMMCVPR: Energy Minimization Methods in Computer Vision and
    Pattern Recognition, LNCS, vol. 2683, 501–516.'
  mla: Kolmogorov, Vladimir, et al. <i>Generalized Multi Camera Scene Reconstruction
    Using Graph Cuts</i>. Vol. 2683, Springer, 2003, pp. 501–16, doi:<a href="https://doi.org/10.1007/978-3-540-45063-4_32">10.1007/978-3-540-45063-4_32</a>.
  short: V. Kolmogorov, R. Zabih, S. Gortler, in:, Springer, 2003, pp. 501–516.
conference:
  name: 'EMMCVPR: Energy Minimization Methods in Computer Vision and Pattern Recognition'
date_created: 2018-12-11T12:01:48Z
date_published: 2003-06-26T00:00:00Z
date_updated: 2021-01-12T07:41:34Z
day: '26'
doi: 10.1007/978-3-540-45063-4_32
extern: 1
intvolume: '      2683'
month: '06'
page: 501 - 516
publication_status: published
publisher: Springer
publist_id: '3512'
quality_controlled: 0
status: public
title: Generalized multi camera scene reconstruction using graph cuts
type: conference
volume: 2683
year: '2003'
...
---
_id: '3174'
abstract:
- lang: eng
  text: We address visual correspondence problems without assuming that scene points
    have similar intensities in different views. This situation is common, usually
    due to non-lambertian scenes or to differences between cameras. We use maximization
    of mutual information, a powerful technique for registering images that requires
    no a priori model of the relationship between scene intensities in different views.
    However, it has proven difficult to use mutual information to compute dense visual
    correspondence. Comparing fixed-size windows via mutual information suffers from
    the well-known problems of fixed windows, namely poor performance at discontinuities
    and in low-texture regions. In this paper, we show how to compute visual correspondence
    using mutual information without suffering from these problems. Using 'a simple
    approximation, mutual information can be incorporated into the standard energy
    minimization framework used in early vision. The energy can then be efficiently
    minimized using graph cuts, which preserve discontinuities and handle low-texture
    regions. The resulting algorithm combines the accurate disparity maps that come
    from graph cuts with the tolerance for intensity changes that comes from mutual
    information.
author:
- first_name: Junhwan
  full_name: Kim, Junhwan
  last_name: Kim
- first_name: Vladimir
  full_name: Vladimir Kolmogorov
  id: 3D50B0BA-F248-11E8-B48F-1D18A9856A87
  last_name: Kolmogorov
- first_name: Ramin
  full_name: Zabih, Ramin
  last_name: Zabih
citation:
  ama: 'Kim J, Kolmogorov V, Zabih R. Visual correspondence using energy minimization
    and mutual information. In: Vol 2. IEEE; 2003:1033-1040. doi:<a href="https://doi.org/10.1109/ICCV.2003.1238463">10.1109/ICCV.2003.1238463</a>'
  apa: 'Kim, J., Kolmogorov, V., &#38; Zabih, R. (2003). Visual correspondence using
    energy minimization and mutual information (Vol. 2, pp. 1033–1040). Presented
    at the ICCV: International Conference on Computer Vision, IEEE. <a href="https://doi.org/10.1109/ICCV.2003.1238463">https://doi.org/10.1109/ICCV.2003.1238463</a>'
  chicago: Kim, Junhwan, Vladimir Kolmogorov, and Ramin Zabih. “Visual Correspondence
    Using Energy Minimization and Mutual Information,” 2:1033–40. IEEE, 2003. <a href="https://doi.org/10.1109/ICCV.2003.1238463">https://doi.org/10.1109/ICCV.2003.1238463</a>.
  ieee: 'J. Kim, V. Kolmogorov, and R. Zabih, “Visual correspondence using energy
    minimization and mutual information,” presented at the ICCV: International Conference
    on Computer Vision, 2003, vol. 2, pp. 1033–1040.'
  ista: 'Kim J, Kolmogorov V, Zabih R. 2003. Visual correspondence using energy minimization
    and mutual information. ICCV: International Conference on Computer Vision vol.
    2, 1033–1040.'
  mla: Kim, Junhwan, et al. <i>Visual Correspondence Using Energy Minimization and
    Mutual Information</i>. Vol. 2, IEEE, 2003, pp. 1033–40, doi:<a href="https://doi.org/10.1109/ICCV.2003.1238463">10.1109/ICCV.2003.1238463</a>.
  short: J. Kim, V. Kolmogorov, R. Zabih, in:, IEEE, 2003, pp. 1033–1040.
conference:
  name: 'ICCV: International Conference on Computer Vision'
date_created: 2018-12-11T12:01:49Z
date_published: 2003-09-30T00:00:00Z
date_updated: 2021-01-12T07:41:35Z
day: '30'
doi: 10.1109/ICCV.2003.1238463
extern: 1
intvolume: '         2'
month: '09'
page: 1033 - 1040
publication_status: published
publisher: IEEE
publist_id: '3510'
quality_controlled: 0
status: public
title: Visual correspondence using energy minimization and mutual information
type: conference
volume: 2
year: '2003'
...
---
_id: '3209'
abstract:
- lang: eng
  text: We show that the fixed alphabet shortest common supersequence (SCS) and the
    fixed alphabet longest common subsequence (LCS) problems parameterized in the
    number of strings are W[1]-hard. Unless W[1]=FPT, this rules out the existence
    of algorithms with time complexity of O(f(k)nα) for those problems. Here n is
    the size of the problem instance, α is constant, k is the number of strings and
    f is any function of k. The fixed alphabet version of the LCS problem is of particular
    interest considering the importance of sequence comparison (e.g. multiple sequence
    alignment) in the fixed length alphabet world of DNA and protein sequences.
author:
- first_name: Krzysztof Z
  full_name: Krzysztof Pietrzak
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
citation:
  ama: Pietrzak KZ. On the parameterized complexity of the fixed alphabet shortest
    common supersequence and longest common subsequence problems. <i>Journal of Computer
    and System Sciences</i>. 2003;67(4):757-771. doi:<a href="https://doi.org/10.1016/S0022-0000(03)00078-3">10.1016/S0022-0000(03)00078-3</a>
  apa: Pietrzak, K. Z. (2003). On the parameterized complexity of the fixed alphabet
    shortest common supersequence and longest common subsequence problems. <i>Journal
    of Computer and System Sciences</i>. Elsevier. <a href="https://doi.org/10.1016/S0022-0000(03)00078-3">https://doi.org/10.1016/S0022-0000(03)00078-3</a>
  chicago: Pietrzak, Krzysztof Z. “On the Parameterized Complexity of the Fixed Alphabet
    Shortest Common Supersequence and Longest Common Subsequence Problems.” <i>Journal
    of Computer and System Sciences</i>. Elsevier, 2003. <a href="https://doi.org/10.1016/S0022-0000(03)00078-3">https://doi.org/10.1016/S0022-0000(03)00078-3</a>.
  ieee: K. Z. Pietrzak, “On the parameterized complexity of the fixed alphabet shortest
    common supersequence and longest common subsequence problems,” <i>Journal of Computer
    and System Sciences</i>, vol. 67, no. 4. Elsevier, pp. 757–771, 2003.
  ista: Pietrzak KZ. 2003. On the parameterized complexity of the fixed alphabet shortest
    common supersequence and longest common subsequence problems. Journal of Computer
    and System Sciences. 67(4), 757–771.
  mla: Pietrzak, Krzysztof Z. “On the Parameterized Complexity of the Fixed Alphabet
    Shortest Common Supersequence and Longest Common Subsequence Problems.” <i>Journal
    of Computer and System Sciences</i>, vol. 67, no. 4, Elsevier, 2003, pp. 757–71,
    doi:<a href="https://doi.org/10.1016/S0022-0000(03)00078-3">10.1016/S0022-0000(03)00078-3</a>.
  short: K.Z. Pietrzak, Journal of Computer and System Sciences 67 (2003) 757–771.
date_created: 2018-12-11T12:02:01Z
date_published: 2003-12-01T00:00:00Z
date_updated: 2021-01-12T07:41:49Z
day: '01'
doi: 10.1016/S0022-0000(03)00078-3
extern: 1
intvolume: '        67'
issue: '4'
month: '12'
page: 757 - 771
publication: Journal of Computer and System Sciences
publication_status: published
publisher: Elsevier
publist_id: '3472'
quality_controlled: 0
status: public
title: On the parameterized complexity of the fixed alphabet shortest common supersequence
  and longest common subsequence problems
type: journal_article
volume: 67
year: '2003'
...
---
_id: '3210'
abstract:
- lang: eng
  text: 'Luby and Rackoff showed how to construct a (super-)pseudo-random permutation
    {0,1}2n→ {0,1}2n from some number r of pseudo-random functions {0,1}n → {0,1}n.
    Their construction, motivated by DES, consists of a cascade of r Feistel permutations.
    A Feistel permutation 1for a pseudo-random function f is defined as (L, R) → (R,L
    ⊕ f (R)), where L and R are the left and right part of the input and ⊕ denotes
    bitwise XOR or, in this paper, any other group operation on {0,1}n. The only non-trivial
    step of the security proof consists of proving that the cascade of r Feistel permutations
    with independent uniform random functions {0,1}n → {0,1}n, denoted Ψ2nr is indistinguishable
    from a uniform random permutation {0,1}2n → {0,1}2n by any computationally unbounded
    adaptive distinguisher making at most O(2cn) combined chosen plaintext/ciphertext
    queries for any c &lt; α, where a is a security parameter. Luby and Rackoff proved
    α = 1/2 for r = 4. A natural problem, proposed by Pieprzyk is to improve on α
    for larger r. The best known result, α = 3/4 for r = 6, is due to Patarin. In
    this paper we prove a = 1 -O(1/r), i.e., the trivial upper bound α = 1 can be
    approached. The proof uses some new techniques that can be of independent interest. '
alternative_title:
- LNCS
author:
- first_name: Ueli
  full_name: Maurer, Ueli M
  last_name: Maurer
- first_name: Krzysztof Z
  full_name: Krzysztof Pietrzak
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
citation:
  ama: 'Maurer U, Pietrzak KZ. The security of many round Luby Rackoff pseudo random
    permutations. In: Vol 2656. Springer; 2003:544-561. doi:<a href="https://doi.org/10.1007/3-540-39200-9_34">10.1007/3-540-39200-9_34</a>'
  apa: 'Maurer, U., &#38; Pietrzak, K. Z. (2003). The security of many round Luby
    Rackoff pseudo random permutations (Vol. 2656, pp. 544–561). Presented at the
    EUROCRYPT: Theory and Applications of Cryptographic Techniques, Springer. <a href="https://doi.org/10.1007/3-540-39200-9_34">https://doi.org/10.1007/3-540-39200-9_34</a>'
  chicago: Maurer, Ueli, and Krzysztof Z Pietrzak. “The Security of Many Round Luby
    Rackoff Pseudo Random Permutations,” 2656:544–61. Springer, 2003. <a href="https://doi.org/10.1007/3-540-39200-9_34">https://doi.org/10.1007/3-540-39200-9_34</a>.
  ieee: 'U. Maurer and K. Z. Pietrzak, “The security of many round Luby Rackoff pseudo
    random permutations,” presented at the EUROCRYPT: Theory and Applications of Cryptographic
    Techniques, 2003, vol. 2656, pp. 544–561.'
  ista: 'Maurer U, Pietrzak KZ. 2003. The security of many round Luby Rackoff pseudo
    random permutations. EUROCRYPT: Theory and Applications of Cryptographic Techniques,
    LNCS, vol. 2656, 544–561.'
  mla: Maurer, Ueli, and Krzysztof Z. Pietrzak. <i>The Security of Many Round Luby
    Rackoff Pseudo Random Permutations</i>. Vol. 2656, Springer, 2003, pp. 544–61,
    doi:<a href="https://doi.org/10.1007/3-540-39200-9_34">10.1007/3-540-39200-9_34</a>.
  short: U. Maurer, K.Z. Pietrzak, in:, Springer, 2003, pp. 544–561.
conference:
  name: 'EUROCRYPT: Theory and Applications of Cryptographic Techniques'
date_created: 2018-12-11T12:02:02Z
date_published: 2003-06-04T00:00:00Z
date_updated: 2021-01-12T07:41:49Z
day: '04'
doi: 10.1007/3-540-39200-9_34
extern: 1
intvolume: '      2656'
month: '06'
page: 544 - 561
publication_status: published
publisher: Springer
publist_id: '3473'
quality_controlled: 0
status: public
title: The security of many round Luby Rackoff pseudo random permutations
type: conference
volume: 2656
year: '2003'
...
