---
_id: '2309'
abstract:
- lang: eng
  text: The importance of chloride ions in cell physiology has not been fully recognized
    until recently, in spite of the fact that chloride (Cl-), together with bicarbonate,
    is the most abundant free anion in animal cells, and performs or determines fundamental
    biological functions in all tissues. For many years it was thought that Cl- was
    distributed in thermodynamic equilibrium across the plasma membrane of most cells.
    Research carried out during the last couple of decades has led to a dramatic change
    in this simplistic view. We now know that most animal cells, neurons included,
    exhibit a non-equilibrium distribution of Cl- across their plasma membranes. Over
    the last 10 to 15 years, with the growth of molecular biology and the advent of
    new optical methods, an enormous amount of exciting new information has become
    available on the molecular structure and function of Cl- channels and carriers.
    In nerve cells, Cl- channels and carriers play key functional roles in GABA- and
    glycine-mediated synaptic inhibition, neuronal growth and development, extracellular
    potassium scavenging, sensory-transduction, neurotransmitter uptake and cell volume
    control. Disruption of Cl- homeostasis in neurons underlies pathological conditions
    such as epilepsy, deafness, imbalance, brain edema and ischemia, pain and neurogenic
    inflammation. This book is about how chloride ions are regulated and how they
    cross the plasma membrane of neurons. It spans from molecular structure and function
    of carriers and channels involved in Cl- transport to their role in various diseases.
    * The first comprehensive book on the structure, molecular biology, cell physiology,
    and role in diseases of chloride transporters / channels in the nervous system
    in almost 20 years * Chloride is the most abundant free anion in animal cells.
    THis book summarizes and integrates for the first time the important research
    of the past two decades that has shown that Cl- channels and carriers play key
    functional roles in GABA- and glycine-mediated synaptic inhibition, neuronal growth
    and development, extracellular potassium scavenging, sensory-transduction, neurotransmitter
    uptake and cell volume control. * The first book that systematically discusses
    the result of disruption of Cl- homeostasis in neurons which underlies pathological
    conditions such as epilepsy, deafness, imbalance, brain edema and ischemia, pain
    and neurogenic inflammation. * Spanning topics from molecular structure and function
    of carriers and channels involved in Cl- transport to their role in various diseases.
    * Involves all of the leading researchers in the field. * INcludes an extensive
    introductory section that covers basic thermodynamic and kinetics aspects of Cl-
    transport, as well as current methods for studying Cl- regulation, spanning from
    fluorescent dyes in single cells to knock-out models to make the book available
    for a growing population of graduate students and postdocs entering the field.
author:
- first_name: Tobias
  full_name: Stauber, Tobias
  last_name: Stauber
- first_name: Gaia
  full_name: Gaia Novarino
  id: 3E57A680-F248-11E8-B48F-1D18A9856A87
  last_name: Novarino
  orcid: 0000-0002-7673-7178
- first_name: Thomas
  full_name: Jentsch, Thomas J
  last_name: Jentsch
citation:
  ama: 'Stauber T, Novarino G, Jentsch T. The CLC family of chloride channels and
    transporters. In: <i>Physiology and Pathology of Chloride Transporters and Channels
    in the Nervous System</i>. Elsevier; 2010:209-231. doi:<a href="https://doi.org/10.1016/B978-0-12-374373-2.00012-1">10.1016/B978-0-12-374373-2.00012-1</a>'
  apa: Stauber, T., Novarino, G., &#38; Jentsch, T. (2010). The CLC family of chloride
    channels and transporters. In <i>Physiology and Pathology of chloride transporters
    and channels in the nervous system</i> (pp. 209–231). Elsevier. <a href="https://doi.org/10.1016/B978-0-12-374373-2.00012-1">https://doi.org/10.1016/B978-0-12-374373-2.00012-1</a>
  chicago: Stauber, Tobias, Gaia Novarino, and Thomas Jentsch. “The CLC Family of
    Chloride Channels and Transporters.” In <i>Physiology and Pathology of Chloride
    Transporters and Channels in the Nervous System</i>, 209–31. Elsevier, 2010. <a
    href="https://doi.org/10.1016/B978-0-12-374373-2.00012-1">https://doi.org/10.1016/B978-0-12-374373-2.00012-1</a>.
  ieee: T. Stauber, G. Novarino, and T. Jentsch, “The CLC family of chloride channels
    and transporters,” in <i>Physiology and Pathology of chloride transporters and
    channels in the nervous system</i>, Elsevier, 2010, pp. 209–231.
  ista: 'Stauber T, Novarino G, Jentsch T. 2010.The CLC family of chloride channels
    and transporters. In: Physiology and Pathology of chloride transporters and channels
    in the nervous system. , 209–231.'
  mla: Stauber, Tobias, et al. “The CLC Family of Chloride Channels and Transporters.”
    <i>Physiology and Pathology of Chloride Transporters and Channels in the Nervous
    System</i>, Elsevier, 2010, pp. 209–31, doi:<a href="https://doi.org/10.1016/B978-0-12-374373-2.00012-1">10.1016/B978-0-12-374373-2.00012-1</a>.
  short: T. Stauber, G. Novarino, T. Jentsch, in:, Physiology and Pathology of Chloride
    Transporters and Channels in the Nervous System, Elsevier, 2010, pp. 209–231.
date_created: 2018-12-11T11:56:54Z
date_published: 2010-01-01T00:00:00Z
date_updated: 2021-01-12T06:56:41Z
day: '01'
doi: 10.1016/B978-0-12-374373-2.00012-1
extern: 1
month: '01'
page: 209 - 231
publication: Physiology and Pathology of chloride transporters and channels in the
  nervous system
publication_status: published
publisher: Elsevier
publist_id: '4616'
quality_controlled: 0
status: public
title: The CLC family of chloride channels and transporters
type: book_chapter
year: '2010'
...
---
_id: '231'
abstract:
- lang: eng
  text: Let X be a projective cubic hypersurface of dimension 11 or more, which is
    defined over ℚ. We show that X(ℚ) is non-empty provided that the cubic form defining
    X can be written as the sum of two forms that share no common variables.
acknowledgement: "EP/E053262/1\tEngineering and Physical Sciences Research Council"
author:
- first_name: Timothy D
  full_name: Timothy Browning
  id: 35827D50-F248-11E8-B48F-1D18A9856A87
  last_name: Browning
  orcid: 0000-0002-8314-0177
- first_name: Jean
  full_name: Colliot-Thélène, Jean-Louis
  last_name: Colliot Thélène
citation:
  ama: Browning TD, Colliot Thélène J. Rational points on cubic hypersurfaces that
    split off a form. With an appendix by J-L Colliot-Thélène. <i>Compositio Mathematica</i>.
    2010;146(4):853-885. doi:<a href="https://doi.org/10.1112/S0010437X0900459X">10.1112/S0010437X0900459X</a>
  apa: Browning, T. D., &#38; Colliot Thélène, J. (2010). Rational points on cubic
    hypersurfaces that split off a form. With an appendix by J-L Colliot-Thélène.
    <i>Compositio Mathematica</i>. Cambridge University Press. <a href="https://doi.org/10.1112/S0010437X0900459X">https://doi.org/10.1112/S0010437X0900459X</a>
  chicago: Browning, Timothy D, and Jean Colliot Thélène. “Rational Points on Cubic
    Hypersurfaces That Split off a Form. With an Appendix by J-L Colliot-Thélène.”
    <i>Compositio Mathematica</i>. Cambridge University Press, 2010. <a href="https://doi.org/10.1112/S0010437X0900459X">https://doi.org/10.1112/S0010437X0900459X</a>.
  ieee: T. D. Browning and J. Colliot Thélène, “Rational points on cubic hypersurfaces
    that split off a form. With an appendix by J-L Colliot-Thélène,” <i>Compositio
    Mathematica</i>, vol. 146, no. 4. Cambridge University Press, pp. 853–885, 2010.
  ista: Browning TD, Colliot Thélène J. 2010. Rational points on cubic hypersurfaces
    that split off a form. With an appendix by J-L Colliot-Thélène. Compositio Mathematica.
    146(4), 853–885.
  mla: Browning, Timothy D., and Jean Colliot Thélène. “Rational Points on Cubic Hypersurfaces
    That Split off a Form. With an Appendix by J-L Colliot-Thélène.” <i>Compositio
    Mathematica</i>, vol. 146, no. 4, Cambridge University Press, 2010, pp. 853–85,
    doi:<a href="https://doi.org/10.1112/S0010437X0900459X">10.1112/S0010437X0900459X</a>.
  short: T.D. Browning, J. Colliot Thélène, Compositio Mathematica 146 (2010) 853–885.
date_created: 2018-12-11T11:45:20Z
date_published: 2010-02-15T00:00:00Z
date_updated: 2021-01-12T06:56:41Z
day: '15'
doi: 10.1112/S0010437X0900459X
extern: 1
intvolume: '       146'
issue: '4'
month: '02'
page: 853 - 885
publication: Compositio Mathematica
publication_status: published
publisher: Cambridge University Press
publist_id: '7673'
quality_controlled: 0
status: public
title: Rational points on cubic hypersurfaces that split off a form. With an appendix
  by J-L Colliot-Thélène
type: journal_article
volume: 146
year: '2010'
...
---
_id: '2310'
abstract:
- lang: eng
  text: Loss of the endosomal anion transport protein ClC-5 impairs renal endocytosis
    and underlies human Dent's disease. ClC-5 is thought to promote endocytosis by
    facilitating endosomal acidification through the neutralization of proton pump
    currents. However, ClC-5 is a 2 chloride (Cl-)/proton (H+) exchanger rather than
    a Cl- channel. We generated mice that carry the uncoupling E211A (unc) mutation
    that converts CLC-5 into a pure CL- conductor. Adenosine triphosphate (ATP)-dependent
    acidification of renal endosomes was reduced in mice in which ClC-5 was knocked
    out, but normal in Clcn5unc mice. However, their proximal tubular endocytosis
    was also impaired. Thus, endosomal chloride concentration, which is raised by
    CLC-5 in exchange for protons accumulated by the H+-ATPase, may play a role in
    endocytosis.
author:
- first_name: Gaia
  full_name: Gaia Novarino
  id: 3E57A680-F248-11E8-B48F-1D18A9856A87
  last_name: Novarino
  orcid: 0000-0002-7673-7178
- first_name: Stefanie
  full_name: Weinert, Stefanie
  last_name: Weinert
- first_name: Gesa
  full_name: Rickheit, Gesa
  last_name: Rickheit
- first_name: Thomas
  full_name: Jentsch, Thomas J
  last_name: Jentsch
citation:
  ama: Novarino G, Weinert S, Rickheit G, Jentsch T. Endosomal chloride-proton exchange
    rather than chloride conductance is crucial for renal endocytosis. <i>Science</i>.
    2010;328(5984):1398-1401. doi:<a href="https://doi.org/10.1126/science.1188070">10.1126/science.1188070</a>
  apa: Novarino, G., Weinert, S., Rickheit, G., &#38; Jentsch, T. (2010). Endosomal
    chloride-proton exchange rather than chloride conductance is crucial for renal
    endocytosis. <i>Science</i>. American Association for the Advancement of Science.
    <a href="https://doi.org/10.1126/science.1188070">https://doi.org/10.1126/science.1188070</a>
  chicago: Novarino, Gaia, Stefanie Weinert, Gesa Rickheit, and Thomas Jentsch. “Endosomal
    Chloride-Proton Exchange Rather than Chloride Conductance Is Crucial for Renal
    Endocytosis.” <i>Science</i>. American Association for the Advancement of Science,
    2010. <a href="https://doi.org/10.1126/science.1188070">https://doi.org/10.1126/science.1188070</a>.
  ieee: G. Novarino, S. Weinert, G. Rickheit, and T. Jentsch, “Endosomal chloride-proton
    exchange rather than chloride conductance is crucial for renal endocytosis,” <i>Science</i>,
    vol. 328, no. 5984. American Association for the Advancement of Science, pp. 1398–1401,
    2010.
  ista: Novarino G, Weinert S, Rickheit G, Jentsch T. 2010. Endosomal chloride-proton
    exchange rather than chloride conductance is crucial for renal endocytosis. Science.
    328(5984), 1398–1401.
  mla: Novarino, Gaia, et al. “Endosomal Chloride-Proton Exchange Rather than Chloride
    Conductance Is Crucial for Renal Endocytosis.” <i>Science</i>, vol. 328, no. 5984,
    American Association for the Advancement of Science, 2010, pp. 1398–401, doi:<a
    href="https://doi.org/10.1126/science.1188070">10.1126/science.1188070</a>.
  short: G. Novarino, S. Weinert, G. Rickheit, T. Jentsch, Science 328 (2010) 1398–1401.
date_created: 2018-12-11T11:56:55Z
date_published: 2010-06-11T00:00:00Z
date_updated: 2021-01-12T06:56:42Z
day: '11'
doi: 10.1126/science.1188070
extern: 1
intvolume: '       328'
issue: '5984'
month: '06'
page: 1398 - 1401
publication: Science
publication_status: published
publisher: American Association for the Advancement of Science
publist_id: '4617'
quality_controlled: 0
status: public
title: Endosomal chloride-proton exchange rather than chloride conductance is crucial
  for renal endocytosis
type: journal_article
volume: 328
year: '2010'
...
---
_id: '2311'
abstract:
- lang: eng
  text: Inactivation of the mainly endosomal 2Cl-/H+- exchanger ClC-5 severely impairs
    endocytosis in renal proximal tubules and underlies the human kidney stone disorder
    Dent's disease. In heterologous expression systems, interaction of the E3 ubiquitin
    ligasesWWP2and Nedd4-2 with a &quot;PY-motif&quot; in the cytoplasmic C terminus
    of ClC-5 stimulates its internalization from the plasma membrane and may influence
    receptor-mediated endocytosis. We asked whether this interaction is relevant in
    vivo and generated mice in which the PY-motif was destroyed by a point mutation.
    Unlike ClC-5 knock-out mice, these knock-in mice displayed neither low molecular
    weight proteinuria nor hyperphosphaturia, and both receptor-mediated and fluid-phase
    endocytosis were normal. The abundances and localizations of the endocytic receptor
    megalin and of the Na+-coupled phosphate transporter NaPi-2a (Npt2) were not changed,
    either. To explore whether the discrepancy in results from heterologous expression
    studies might be due to heteromerization of ClC-5 with ClC-3 or ClC-4 in vivo,
    we studied knock-in mice additionally deleted for those related transporters.
    Disruption of neither ClC-3 nor ClC-4 led to proteinuria or impaired proximal
    tubular endocytosis by itself, nor in combination with the PY-mutant of ClC-5.
    Endocytosis of cells lacking ClC-5 was not impaired further when ClC-3 or ClC-4
    was additionally deleted. We conclude that ClC-5 is unique among CLC proteins
    in being crucial for proximal tubular endocytosis and that PY-motif-dependent
    ubiquitylation of ClC-5 is dispensable for this role.
author:
- first_name: Gesa
  full_name: Rickheit, Gesa
  last_name: Rickheit
- first_name: Lena
  full_name: Wartosch, Lena
  last_name: Wartosch
- first_name: Sven
  full_name: Schaffer, Sven
  last_name: Schaffer
- first_name: Sandra
  full_name: Stobrawa, Sandra M
  last_name: Stobrawa
- first_name: Gaia
  full_name: Gaia Novarino
  id: 3E57A680-F248-11E8-B48F-1D18A9856A87
  last_name: Novarino
  orcid: 0000-0002-7673-7178
- first_name: Stefanie
  full_name: Weinert, Stefanie
  last_name: Weinert
- first_name: Thomas
  full_name: Jentsch, Thomas J
  last_name: Jentsch
citation:
  ama: Rickheit G, Wartosch L, Schaffer S, et al. Role of ClC-5 in renal endocytosis
    is unique among ClC exchangers and does not require PY-motif-dependent ubiquitylation.
    <i>Journal of Biological Chemistry</i>. 2010;285(23):17595-17603. doi:<a href="https://doi.org/10.1074/jbc.M110.115600">10.1074/jbc.M110.115600</a>
  apa: Rickheit, G., Wartosch, L., Schaffer, S., Stobrawa, S., Novarino, G., Weinert,
    S., &#38; Jentsch, T. (2010). Role of ClC-5 in renal endocytosis is unique among
    ClC exchangers and does not require PY-motif-dependent ubiquitylation. <i>Journal
    of Biological Chemistry</i>. American Society for Biochemistry and Molecular Biology.
    <a href="https://doi.org/10.1074/jbc.M110.115600">https://doi.org/10.1074/jbc.M110.115600</a>
  chicago: Rickheit, Gesa, Lena Wartosch, Sven Schaffer, Sandra Stobrawa, Gaia Novarino,
    Stefanie Weinert, and Thomas Jentsch. “Role of ClC-5 in Renal Endocytosis Is Unique
    among ClC Exchangers and Does Not Require PY-Motif-Dependent Ubiquitylation.”
    <i>Journal of Biological Chemistry</i>. American Society for Biochemistry and
    Molecular Biology, 2010. <a href="https://doi.org/10.1074/jbc.M110.115600">https://doi.org/10.1074/jbc.M110.115600</a>.
  ieee: G. Rickheit <i>et al.</i>, “Role of ClC-5 in renal endocytosis is unique among
    ClC exchangers and does not require PY-motif-dependent ubiquitylation,” <i>Journal
    of Biological Chemistry</i>, vol. 285, no. 23. American Society for Biochemistry
    and Molecular Biology, pp. 17595–17603, 2010.
  ista: Rickheit G, Wartosch L, Schaffer S, Stobrawa S, Novarino G, Weinert S, Jentsch
    T. 2010. Role of ClC-5 in renal endocytosis is unique among ClC exchangers and
    does not require PY-motif-dependent ubiquitylation. Journal of Biological Chemistry.
    285(23), 17595–17603.
  mla: Rickheit, Gesa, et al. “Role of ClC-5 in Renal Endocytosis Is Unique among
    ClC Exchangers and Does Not Require PY-Motif-Dependent Ubiquitylation.” <i>Journal
    of Biological Chemistry</i>, vol. 285, no. 23, American Society for Biochemistry
    and Molecular Biology, 2010, pp. 17595–603, doi:<a href="https://doi.org/10.1074/jbc.M110.115600">10.1074/jbc.M110.115600</a>.
  short: G. Rickheit, L. Wartosch, S. Schaffer, S. Stobrawa, G. Novarino, S. Weinert,
    T. Jentsch, Journal of Biological Chemistry 285 (2010) 17595–17603.
date_created: 2018-12-11T11:56:55Z
date_published: 2010-06-04T00:00:00Z
date_updated: 2021-01-12T06:56:42Z
day: '04'
doi: 10.1074/jbc.M110.115600
extern: 1
intvolume: '       285'
issue: '23'
month: '06'
page: 17595 - 17603
publication: Journal of Biological Chemistry
publication_status: published
publisher: American Society for Biochemistry and Molecular Biology
publist_id: '4618'
quality_controlled: 0
status: public
title: Role of ClC-5 in renal endocytosis is unique among ClC exchangers and does
  not require PY-motif-dependent ubiquitylation
type: journal_article
volume: 285
year: '2010'
...
---
_id: '232'
abstract:
- lang: eng
  text: We study the average order of the divisor function, as it ranges over the
    values of binary quartic forms that are reducible over ℚ.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Régis
  full_name: De La Bretèche, Régis
  last_name: De La Bretèche
- first_name: Timothy D
  full_name: Browning, Timothy D
  id: 35827D50-F248-11E8-B48F-1D18A9856A87
  last_name: Browning
  orcid: 0000-0002-8314-0177
citation:
  ama: De La Bretèche R, Browning TD. Le problème des diviseurs pour des formes binaires
    de degré 4. <i>Journal fur die Reine und Angewandte Mathematik</i>. 2010;(646):1-44.
    doi:<a href="https://doi.org/10.1515/CRELLE.2010.064">10.1515/CRELLE.2010.064</a>
  apa: De La Bretèche, R., &#38; Browning, T. D. (2010). Le problème des diviseurs
    pour des formes binaires de degré 4. <i>Journal Fur Die Reine Und Angewandte Mathematik</i>.
    Walter de Gruyter. <a href="https://doi.org/10.1515/CRELLE.2010.064">https://doi.org/10.1515/CRELLE.2010.064</a>
  chicago: De La Bretèche, Régis, and Timothy D Browning. “Le Problème Des Diviseurs
    Pour Des Formes Binaires de Degré 4.” <i>Journal Fur Die Reine Und Angewandte
    Mathematik</i>. Walter de Gruyter, 2010. <a href="https://doi.org/10.1515/CRELLE.2010.064">https://doi.org/10.1515/CRELLE.2010.064</a>.
  ieee: R. De La Bretèche and T. D. Browning, “Le problème des diviseurs pour des
    formes binaires de degré 4,” <i>Journal fur die Reine und Angewandte Mathematik</i>,
    no. 646. Walter de Gruyter, pp. 1–44, 2010.
  ista: De La Bretèche R, Browning TD. 2010. Le problème des diviseurs pour des formes
    binaires de degré 4. Journal fur die Reine und Angewandte Mathematik. (646), 1–44.
  mla: De La Bretèche, Régis, and Timothy D. Browning. “Le Problème Des Diviseurs
    Pour Des Formes Binaires de Degré 4.” <i>Journal Fur Die Reine Und Angewandte
    Mathematik</i>, no. 646, Walter de Gruyter, 2010, pp. 1–44, doi:<a href="https://doi.org/10.1515/CRELLE.2010.064">10.1515/CRELLE.2010.064</a>.
  short: R. De La Bretèche, T.D. Browning, Journal Fur Die Reine Und Angewandte Mathematik
    (2010) 1–44.
date_created: 2018-12-11T11:45:20Z
date_published: 2010-09-17T00:00:00Z
date_updated: 2021-01-12T06:56:45Z
day: '17'
doi: 10.1515/CRELLE.2010.064
extern: '1'
external_id:
  arxiv:
  - '0808.2340'
issue: '646'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/0808.2340
month: '09'
oa: 1
oa_version: Preprint
page: 1 - 44
publication: Journal fur die Reine und Angewandte Mathematik
publication_status: published
publisher: Walter de Gruyter
publist_id: '7672'
quality_controlled: '1'
status: public
title: Le problème des diviseurs pour des formes binaires de degré 4
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2010'
...
---
_id: '2322'
author:
- first_name: Rupert
  full_name: Frank, Rupert L
  last_name: Frank
- first_name: Élliott
  full_name: Lieb, Élliott H
  last_name: Lieb
- first_name: Robert
  full_name: Robert Seiringer
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
citation:
  ama: 'Frank R, Lieb É, Seiringer R.  Equivalence of Sobolev inequalities and Lieb-Thirring
    inequalities. In: World Scientific Publishing; 2010:523-535. doi:<a href="https://doi.org/10.1142/9789814304634_0045
    ">10.1142/9789814304634_0045 </a>'
  apa: 'Frank, R., Lieb, É., &#38; Seiringer, R. (2010).  Equivalence of Sobolev inequalities
    and Lieb-Thirring inequalities (pp. 523–535). Presented at the ICMP: International
    Congress on Mathematical Physics, World Scientific Publishing. <a href="https://doi.org/10.1142/9789814304634_0045
    ">https://doi.org/10.1142/9789814304634_0045 </a>'
  chicago: Frank, Rupert, Élliott Lieb, and Robert Seiringer. “ Equivalence of Sobolev
    Inequalities and Lieb-Thirring Inequalities,” 523–35. World Scientific Publishing,
    2010. <a href="https://doi.org/10.1142/9789814304634_0045 ">https://doi.org/10.1142/9789814304634_0045
    </a>.
  ieee: 'R. Frank, É. Lieb, and R. Seiringer, “ Equivalence of Sobolev inequalities
    and Lieb-Thirring inequalities,” presented at the ICMP: International Congress
    on Mathematical Physics, 2010, pp. 523–535.'
  ista: 'Frank R, Lieb É, Seiringer R. 2010.  Equivalence of Sobolev inequalities
    and Lieb-Thirring inequalities. ICMP: International Congress on Mathematical Physics,
    523–535.'
  mla: Frank, Rupert, et al. <i> Equivalence of Sobolev Inequalities and Lieb-Thirring
    Inequalities</i>. World Scientific Publishing, 2010, pp. 523–35, doi:<a href="https://doi.org/10.1142/9789814304634_0045
    ">10.1142/9789814304634_0045 </a>.
  short: R. Frank, É. Lieb, R. Seiringer, in:, World Scientific Publishing, 2010,
    pp. 523–535.
conference:
  name: 'ICMP: International Congress on Mathematical Physics'
date_created: 2018-12-11T11:56:59Z
date_published: 2010-03-31T00:00:00Z
date_updated: 2021-01-12T06:56:46Z
day: '31'
doi: '10.1142/9789814304634_0045 '
extern: 1
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/0909.5449
month: '03'
oa: 1
page: 523 - 535
publication_status: published
publisher: World Scientific Publishing
publist_id: '4605'
quality_controlled: 0
status: public
title: ' Equivalence of Sobolev inequalities and Lieb-Thirring inequalities'
type: conference
year: '2010'
...
---
_id: '2323'
abstract:
- lang: eng
  text: Since the first experimental realization of Bose-Einstein condensation in
    cold atomic gases in 1995 there has been a surge of activity in this field. Ingenious
    experiments have allowed us to probe matter close to zero temperature and reveal
    some of the fascinating effects quantum mechanics has bestowed on nature. It is
    a challenge for mathematical physicists to understand these various phenomena
    from first principles, that is, starting from the underlying many-body Schrödinger
    equation. Recent progress in this direction concerns mainly equilibrium properties
    of dilute, cold quantum gases. We shall explain some of the results in this article,
    and describe the mathematics involved in understanding these phenomena. Topics
    include the ground state energy and the free energy at positive temperature, the
    effect of interparticle interaction on the critical temperature for Bose-Einstein
    condensation, as well as the occurrence of superfluidity and quantized vortices
    in rapidly rotating gases.
author:
- first_name: Robert
  full_name: Robert Seiringer
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
citation:
  ama: 'Seiringer R. Hot topics on cold gases. In: World Scientific Publishing; 2010:231-245.
    doi:<a href="https://doi.org/10.1142/9789814304634_0013">10.1142/9789814304634_0013</a>'
  apa: 'Seiringer, R. (2010). Hot topics on cold gases (pp. 231–245). Presented at
    the ICMP: International Congress on Mathematical Physics, World Scientific Publishing.
    <a href="https://doi.org/10.1142/9789814304634_0013">https://doi.org/10.1142/9789814304634_0013</a>'
  chicago: Seiringer, Robert. “Hot Topics on Cold Gases,” 231–45. World Scientific
    Publishing, 2010. <a href="https://doi.org/10.1142/9789814304634_0013">https://doi.org/10.1142/9789814304634_0013</a>.
  ieee: 'R. Seiringer, “Hot topics on cold gases,” presented at the ICMP: International
    Congress on Mathematical Physics, 2010, pp. 231–245.'
  ista: 'Seiringer R. 2010. Hot topics on cold gases. ICMP: International Congress
    on Mathematical Physics, 231–245.'
  mla: Seiringer, Robert. <i>Hot Topics on Cold Gases</i>. World Scientific Publishing,
    2010, pp. 231–45, doi:<a href="https://doi.org/10.1142/9789814304634_0013">10.1142/9789814304634_0013</a>.
  short: R. Seiringer, in:, World Scientific Publishing, 2010, pp. 231–245.
conference:
  name: 'ICMP: International Congress on Mathematical Physics'
date_created: 2018-12-11T11:56:59Z
date_published: 2010-03-31T00:00:00Z
date_updated: 2021-01-12T06:56:46Z
day: '31'
doi: 10.1142/9789814304634_0013
extern: 1
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/0908.3686
month: '03'
oa: 1
page: 231 - 245
publication_status: published
publisher: World Scientific Publishing
publist_id: '4604'
quality_controlled: 0
status: public
title: Hot topics on cold gases
type: conference
year: '2010'
...
---
_id: '2324'
abstract:
- lang: eng
  text: We determine the sharp constant in the Hardy inequality for fractional Sobolev
    spaces on half-spaces. Our proof relies on a nonlinear and nonlocal version of
    the ground state representation.
alternative_title:
- International Mathematical Series
author:
- first_name: Rupert
  full_name: Frank, Rupert L
  last_name: Frank
- first_name: Robert
  full_name: Robert Seiringer
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
citation:
  ama: 'Frank R, Seiringer R. Sharp fractional Hardy inequalities in half-spaces.
    In: <i>Around the Research of Vladimir Maz’ya I</i>. Vol 11. Springer; 2010:161-167.
    doi:<a href="https://doi.org/10.1007/978-1-4419-1341-8_6">10.1007/978-1-4419-1341-8_6</a>'
  apa: Frank, R., &#38; Seiringer, R. (2010). Sharp fractional Hardy inequalities
    in half-spaces. In <i>Around the Research of Vladimir Maz’ya I</i> (Vol. 11, pp.
    161–167). Springer. <a href="https://doi.org/10.1007/978-1-4419-1341-8_6">https://doi.org/10.1007/978-1-4419-1341-8_6</a>
  chicago: Frank, Rupert, and Robert Seiringer. “Sharp Fractional Hardy Inequalities
    in Half-Spaces.” In <i>Around the Research of Vladimir Maz’ya I</i>, 11:161–67.
    Springer, 2010. <a href="https://doi.org/10.1007/978-1-4419-1341-8_6">https://doi.org/10.1007/978-1-4419-1341-8_6</a>.
  ieee: R. Frank and R. Seiringer, “Sharp fractional Hardy inequalities in half-spaces,”
    in <i>Around the Research of Vladimir Maz’ya I</i>, vol. 11, Springer, 2010, pp.
    161–167.
  ista: 'Frank R, Seiringer R. 2010.Sharp fractional Hardy inequalities in half-spaces.
    In: Around the Research of Vladimir Maz’ya I. International Mathematical Series,
    vol. 11, 161–167.'
  mla: Frank, Rupert, and Robert Seiringer. “Sharp Fractional Hardy Inequalities in
    Half-Spaces.” <i>Around the Research of Vladimir Maz’ya I</i>, vol. 11, Springer,
    2010, pp. 161–67, doi:<a href="https://doi.org/10.1007/978-1-4419-1341-8_6">10.1007/978-1-4419-1341-8_6</a>.
  short: R. Frank, R. Seiringer, in:, Around the Research of Vladimir Maz’ya I, Springer,
    2010, pp. 161–167.
date_created: 2018-12-11T11:56:59Z
date_published: 2010-01-01T00:00:00Z
date_updated: 2021-01-12T06:56:46Z
day: '01'
doi: 10.1007/978-1-4419-1341-8_6
extern: 1
intvolume: '        11'
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/0906.1561
month: '01'
oa: 1
page: 161 - 167
publication: Around the Research of Vladimir Maz'ya I
publication_status: published
publisher: Springer
publist_id: '4603'
quality_controlled: 0
status: public
title: Sharp fractional Hardy inequalities in half-spaces
type: book_chapter
volume: 11
year: '2010'
...
---
_id: '2389'
abstract:
- lang: eng
  text: We study the eigenvalues of Schrödinger type operators T + λV and their asymptotic
    behavior in the small coupling limit λ → 0, in the case where the symbol of the
    kinetic energy, T (p), strongly degenerates on a non-trivial manifold of codimension
    one.
author:
- first_name: Christian
  full_name: Hainzl, Christian
  last_name: Hainzl
- first_name: Robert
  full_name: Robert Seiringer
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
citation:
  ama: Hainzl C, Seiringer R. Asymptotic behavior of eigenvalues of Schrödinger type
    operators with degenerate kinetic energy. <i>Mathematische Nachrichten</i>. 2010;283(3):489-499.
    doi:<a href="https://doi.org/10.1002/mana.200810195">10.1002/mana.200810195</a>
  apa: Hainzl, C., &#38; Seiringer, R. (2010). Asymptotic behavior of eigenvalues
    of Schrödinger type operators with degenerate kinetic energy. <i>Mathematische
    Nachrichten</i>. Wiley-Blackwell. <a href="https://doi.org/10.1002/mana.200810195">https://doi.org/10.1002/mana.200810195</a>
  chicago: Hainzl, Christian, and Robert Seiringer. “Asymptotic Behavior of Eigenvalues
    of Schrödinger Type Operators with Degenerate Kinetic Energy.” <i>Mathematische
    Nachrichten</i>. Wiley-Blackwell, 2010. <a href="https://doi.org/10.1002/mana.200810195">https://doi.org/10.1002/mana.200810195</a>.
  ieee: C. Hainzl and R. Seiringer, “Asymptotic behavior of eigenvalues of Schrödinger
    type operators with degenerate kinetic energy,” <i>Mathematische Nachrichten</i>,
    vol. 283, no. 3. Wiley-Blackwell, pp. 489–499, 2010.
  ista: Hainzl C, Seiringer R. 2010. Asymptotic behavior of eigenvalues of Schrödinger
    type operators with degenerate kinetic energy. Mathematische Nachrichten. 283(3),
    489–499.
  mla: Hainzl, Christian, and Robert Seiringer. “Asymptotic Behavior of Eigenvalues
    of Schrödinger Type Operators with Degenerate Kinetic Energy.” <i>Mathematische
    Nachrichten</i>, vol. 283, no. 3, Wiley-Blackwell, 2010, pp. 489–99, doi:<a href="https://doi.org/10.1002/mana.200810195">10.1002/mana.200810195</a>.
  short: C. Hainzl, R. Seiringer, Mathematische Nachrichten 283 (2010) 489–499.
date_created: 2018-12-11T11:57:23Z
date_published: 2010-03-01T00:00:00Z
date_updated: 2021-01-12T06:57:11Z
day: '01'
doi: 10.1002/mana.200810195
extern: 1
intvolume: '       283'
issue: '3'
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/0808.3737
month: '03'
oa: 1
page: 489 - 499
publication: Mathematische Nachrichten
publication_status: published
publisher: Wiley-Blackwell
publist_id: '4537'
quality_controlled: 0
status: public
title: Asymptotic behavior of eigenvalues of Schrödinger type operators with degenerate
  kinetic energy
type: journal_article
volume: 283
year: '2010'
...
---
_id: '2392'
abstract:
- lang: eng
  text: The binding of polarons, or its absence, is an old and subtle topic. Here
    we prove two things rigorously. First, the transition from many-body collapse
    to the existence of a thermodynamic limit for N polarons occurs precisely at U=2α,
    where U is the electronic Coulomb repulsion and α is the polaron coupling constant.
    Second, if U is large enough, there is no multipolaron binding of any kind. Considering
    the known fact that there is binding for some U&gt;2α, these conclusions are not
    obvious and their proof has been an open problem for some time.
author:
- first_name: Rupert
  full_name: Frank, Rupert L
  last_name: Frank
- first_name: Élliott
  full_name: Lieb, Élliott H
  last_name: Lieb
- first_name: Robert
  full_name: Robert Seiringer
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
- first_name: Lawrence
  full_name: Thomas, Lawrence E
  last_name: Thomas
citation:
  ama: Frank R, Lieb É, Seiringer R, Thomas L. Bipolaron and N-polaron binding energies.
    <i>Physical Review Letters</i>. 2010;104(21). doi:<a href="https://doi.org/10.1103/PhysRevLett.104.210402">10.1103/PhysRevLett.104.210402</a>
  apa: Frank, R., Lieb, É., Seiringer, R., &#38; Thomas, L. (2010). Bipolaron and
    N-polaron binding energies. <i>Physical Review Letters</i>. American Physical
    Society. <a href="https://doi.org/10.1103/PhysRevLett.104.210402">https://doi.org/10.1103/PhysRevLett.104.210402</a>
  chicago: Frank, Rupert, Élliott Lieb, Robert Seiringer, and Lawrence Thomas. “Bipolaron
    and N-Polaron Binding Energies.” <i>Physical Review Letters</i>. American Physical
    Society, 2010. <a href="https://doi.org/10.1103/PhysRevLett.104.210402">https://doi.org/10.1103/PhysRevLett.104.210402</a>.
  ieee: R. Frank, É. Lieb, R. Seiringer, and L. Thomas, “Bipolaron and N-polaron binding
    energies,” <i>Physical Review Letters</i>, vol. 104, no. 21. American Physical
    Society, 2010.
  ista: Frank R, Lieb É, Seiringer R, Thomas L. 2010. Bipolaron and N-polaron binding
    energies. Physical Review Letters. 104(21).
  mla: Frank, Rupert, et al. “Bipolaron and N-Polaron Binding Energies.” <i>Physical
    Review Letters</i>, vol. 104, no. 21, American Physical Society, 2010, doi:<a
    href="https://doi.org/10.1103/PhysRevLett.104.210402">10.1103/PhysRevLett.104.210402</a>.
  short: R. Frank, É. Lieb, R. Seiringer, L. Thomas, Physical Review Letters 104 (2010).
date_created: 2018-12-11T11:57:24Z
date_published: 2010-01-01T00:00:00Z
date_updated: 2021-01-12T06:57:12Z
day: '01'
doi: 10.1103/PhysRevLett.104.210402
extern: 1
intvolume: '       104'
issue: '21'
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1004.1196
month: '01'
oa: 1
publication: Physical Review Letters
publication_status: published
publisher: American Physical Society
publist_id: '4536'
quality_controlled: 0
status: public
title: Bipolaron and N-polaron binding energies
type: journal_article
volume: 104
year: '2010'
...
---
_id: '2409'
abstract:
- lang: eng
  text: "Background: The availability of many gene alignments with overlapping taxon
    sets raises the question of which strategy is the best to infer species phylogenies
    from multiple gene information. Methods and programs abound that use the gene
    alignment in different ways to reconstruct the species tree. In particular, different
    methods combine the original data at different points along the way from the underlying
    sequences to the final tree. Accordingly, they are classified into superalignment,
    supertree and medium-level approaches. Here, we present a simulation study to
    compare different methods from each of these three approaches.\r\n\r\nResults:
    We observe that superalignment methods usually outperform the other approaches
    over a wide range of parameters including sparse data and gene-specific evolutionary
    parameters. In the presence of high incongruency among gene trees, however, other
    combination methods show better performance than the superalignment approach.
    Surprisingly, some supertree and medium-level methods exhibit, on average, worse
    results than a single gene phylogeny with complete taxon information.\r\n\r\nConclusions:
    For some methods, using the reconstructed gene tree as an estimation of the species
    tree is superior to the combination of incomplete information. Superalignment
    usually performs best since it is less susceptible to stochastic error. Supertree
    methods can outperform superalignment in the presence of gene-tree conflict."
acknowledgement: Financial support from the Wiener Wissenschafts-, Forschungs- and
  Technologiefonds (WWTF) is greatly appreciated. A.v.H. acknowledges support from
  the German Research Foundation (DFG, SPP-1174).
article_number: '37'
author:
- first_name: Anne
  full_name: Kupczok, Anne
  id: 2BB22BC2-F248-11E8-B48F-1D18A9856A87
  last_name: Kupczok
- first_name: Heiko
  full_name: Schmidt, Heiko
  last_name: Schmidt
- first_name: Arndt
  full_name: Von Haeseler, Arndt
  last_name: Von Haeseler
citation:
  ama: Kupczok A, Schmidt H, Von Haeseler A. Accuracy of phylogeny reconstruction
    methods combining overlapping gene data sets . <i>Algorithms for Molecular Biology</i>.
    2010;5(1). doi:<a href="https://doi.org/10.1186/1748-7188-5-37">10.1186/1748-7188-5-37</a>
  apa: Kupczok, A., Schmidt, H., &#38; Von Haeseler, A. (2010). Accuracy of phylogeny
    reconstruction methods combining overlapping gene data sets . <i>Algorithms for
    Molecular Biology</i>. BioMed Central. <a href="https://doi.org/10.1186/1748-7188-5-37">https://doi.org/10.1186/1748-7188-5-37</a>
  chicago: Kupczok, Anne, Heiko Schmidt, and Arndt Von Haeseler. “Accuracy of Phylogeny
    Reconstruction Methods Combining Overlapping Gene Data Sets .” <i>Algorithms for
    Molecular Biology</i>. BioMed Central, 2010. <a href="https://doi.org/10.1186/1748-7188-5-37">https://doi.org/10.1186/1748-7188-5-37</a>.
  ieee: A. Kupczok, H. Schmidt, and A. Von Haeseler, “Accuracy of phylogeny reconstruction
    methods combining overlapping gene data sets ,” <i>Algorithms for Molecular Biology</i>,
    vol. 5, no. 1. BioMed Central, 2010.
  ista: Kupczok A, Schmidt H, Von Haeseler A. 2010. Accuracy of phylogeny reconstruction
    methods combining overlapping gene data sets . Algorithms for Molecular Biology.
    5(1), 37.
  mla: Kupczok, Anne, et al. “Accuracy of Phylogeny Reconstruction Methods Combining
    Overlapping Gene Data Sets .” <i>Algorithms for Molecular Biology</i>, vol. 5,
    no. 1, 37, BioMed Central, 2010, doi:<a href="https://doi.org/10.1186/1748-7188-5-37">10.1186/1748-7188-5-37</a>.
  short: A. Kupczok, H. Schmidt, A. Von Haeseler, Algorithms for Molecular Biology
    5 (2010).
date_created: 2018-12-11T11:57:30Z
date_published: 2010-12-06T00:00:00Z
date_updated: 2021-01-12T06:57:18Z
day: '06'
ddc:
- '576'
department:
- _id: JoBo
doi: 10.1186/1748-7188-5-37
file:
- access_level: open_access
  checksum: e2497285388bc4da629bafb46662eb43
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:09:16Z
  date_updated: 2020-07-14T12:45:40Z
  file_id: '4739'
  file_name: IST-2018-939-v1+1_2010_Kupczok_Accuracy_of.pdf
  file_size: 723929
  relation: main_file
file_date_updated: 2020-07-14T12:45:40Z
has_accepted_license: '1'
intvolume: '         5'
issue: '1'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
publication: Algorithms for Molecular Biology
publication_status: published
publisher: BioMed Central
publist_id: '4517'
pubrep_id: '939'
quality_controlled: '1'
scopus_import: 1
status: public
title: 'Accuracy of phylogeny reconstruction methods combining overlapping gene data
  sets '
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 5
year: '2010'
...
---
_id: '2435'
abstract:
- lang: eng
  text: |
    We consider a generalization of the van Kampen-Flores Theorem and relate it to the long-standing g-conjecture for simplicial spheres.
author:
- first_name: Eran
  full_name: Nevo, Eran
  last_name: Nevo
- first_name: Uli
  full_name: Uli Wagner
  id: 36690CA2-F248-11E8-B48F-1D18A9856A87
  last_name: Wagner
  orcid: 0000-0002-1494-0568
citation:
  ama: Nevo E, Wagner U. On the embeddability of skeleta of spheres. <i>Israel Journal
    of Mathematics</i>. 2010;174(1):381-402. doi:<a href="https://doi.org/10.1007/s11856-009-0119-5">10.1007/s11856-009-0119-5</a>
  apa: Nevo, E., &#38; Wagner, U. (2010). On the embeddability of skeleta of spheres.
    <i>Israel Journal of Mathematics</i>. Springer. <a href="https://doi.org/10.1007/s11856-009-0119-5">https://doi.org/10.1007/s11856-009-0119-5</a>
  chicago: Nevo, Eran, and Uli Wagner. “On the Embeddability of Skeleta of Spheres.”
    <i>Israel Journal of Mathematics</i>. Springer, 2010. <a href="https://doi.org/10.1007/s11856-009-0119-5">https://doi.org/10.1007/s11856-009-0119-5</a>.
  ieee: E. Nevo and U. Wagner, “On the embeddability of skeleta of spheres,” <i>Israel
    Journal of Mathematics</i>, vol. 174, no. 1. Springer, pp. 381–402, 2010.
  ista: Nevo E, Wagner U. 2010. On the embeddability of skeleta of spheres. Israel
    Journal of Mathematics. 174(1), 381–402.
  mla: Nevo, Eran, and Uli Wagner. “On the Embeddability of Skeleta of Spheres.” <i>Israel
    Journal of Mathematics</i>, vol. 174, no. 1, Springer, 2010, pp. 381–402, doi:<a
    href="https://doi.org/10.1007/s11856-009-0119-5">10.1007/s11856-009-0119-5</a>.
  short: E. Nevo, U. Wagner, Israel Journal of Mathematics 174 (2010) 381–402.
date_created: 2018-12-11T11:57:38Z
date_published: 2010-11-01T00:00:00Z
date_updated: 2021-01-12T06:57:28Z
day: '01'
doi: 10.1007/s11856-009-0119-5
extern: 1
intvolume: '       174'
issue: '1'
month: '11'
page: 381 - 402
publication: Israel Journal of Mathematics
publication_status: published
publisher: Springer
publist_id: '4472'
quality_controlled: 0
status: public
title: On the embeddability of skeleta of spheres
type: journal_article
volume: 174
year: '2010'
...
---
_id: '2442'
abstract:
- lang: eng
  text: In a new study published in this issue of Developmental Cell, Krouk et al.
    reveal a surprising mechanism by which plant root systems adapt their architecture
    for soil exploitation. The dual transporter NRT1.1 uses both nitrate and the plant
    hormone auxin as substrates, enabling soil nitrate availability to regulate auxin-driven
    lateral root development.
author:
- first_name: Tom
  full_name: Beeckman, Tom
  last_name: Beeckman
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: 'Beeckman T, Friml J. Nitrate Contra Auxin: Nutrient Sensing by roots. <i>Developmental
    Cell</i>. 2010;18(6):877-878. doi:<a href="https://doi.org/10.1016/j.devcel.2010.05.020">10.1016/j.devcel.2010.05.020</a>'
  apa: 'Beeckman, T., &#38; Friml, J. (2010). Nitrate Contra Auxin: Nutrient Sensing
    by roots. <i>Developmental Cell</i>. Cell Press. <a href="https://doi.org/10.1016/j.devcel.2010.05.020">https://doi.org/10.1016/j.devcel.2010.05.020</a>'
  chicago: 'Beeckman, Tom, and Jiří Friml. “Nitrate Contra Auxin: Nutrient Sensing
    by Roots.” <i>Developmental Cell</i>. Cell Press, 2010. <a href="https://doi.org/10.1016/j.devcel.2010.05.020">https://doi.org/10.1016/j.devcel.2010.05.020</a>.'
  ieee: 'T. Beeckman and J. Friml, “Nitrate Contra Auxin: Nutrient Sensing by roots,”
    <i>Developmental Cell</i>, vol. 18, no. 6. Cell Press, pp. 877–878, 2010.'
  ista: 'Beeckman T, Friml J. 2010. Nitrate Contra Auxin: Nutrient Sensing by roots.
    Developmental Cell. 18(6), 877–878.'
  mla: 'Beeckman, Tom, and Jiří Friml. “Nitrate Contra Auxin: Nutrient Sensing by
    Roots.” <i>Developmental Cell</i>, vol. 18, no. 6, Cell Press, 2010, pp. 877–78,
    doi:<a href="https://doi.org/10.1016/j.devcel.2010.05.020">10.1016/j.devcel.2010.05.020</a>.'
  short: T. Beeckman, J. Friml, Developmental Cell 18 (2010) 877–878.
date_created: 2018-12-11T11:57:41Z
date_published: 2010-06-15T00:00:00Z
date_updated: 2021-01-12T06:57:31Z
day: '15'
doi: 10.1016/j.devcel.2010.05.020
extern: '1'
external_id:
  pmid:
  - '    20627068'
intvolume: '        18'
issue: '6'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pubmed/20627068
month: '06'
oa: 1
oa_version: Published Version
page: 877 - 878
pmid: 1
publication: Developmental Cell
publication_status: published
publisher: Cell Press
publist_id: '4461'
quality_controlled: '1'
status: public
title: 'Nitrate Contra Auxin: Nutrient Sensing by roots'
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 18
year: '2010'
...
---
_id: '2503'
abstract:
- lang: eng
  text: Epilepsy is a devastating and poorly understood disease. Mutations in a secreted
    neuronal protein, leucine-rich glioma inactivated 1 (LGI1), were reported in patients
    with an inherited form of human epilepsy, autosomal dominant partial epilepsy
    with auditory features (ADPEAF). Here, we report an essential role of LGI1 as
    an antiepileptogenic ligand. We find that loss of LGI1 in mice (LGI1-/-) causes
    lethal epilepsy, which is specifically rescued by the neuronal expression of LGI1
    transgene, but not LGI3. Moreover, heterozygous mice for the LGI1 mutation (LGI1+/-)
    show lowered seizure thresholds. Extracellularly secreted LGI1 links two epilepsy-related
    receptors, ADAM22 and ADAM23, in the brain and organizes a transsynaptic protein
    complex that includes presynaptic potassium channels and postsynaptic AMPA receptor
    scaffolds. A lack of LGI1 disrupts this synaptic protein connection and selectively
    reduces AMPA receptor-mediated synaptic transmission in the hippocampus. Thus,
    LGI1 may serve as a major determinant of brain excitation, and the LGI1 gene-targeted
    mouse provides a good model for human epilepsy.
author:
- first_name: Yuko
  full_name: Fukata, Yuko
  last_name: Fukata
- first_name: Kathryn
  full_name: Lovero, Kathryn L
  last_name: Lovero
- first_name: Tsuyoshi
  full_name: Iwanaga, Tsuyoshi
  last_name: Iwanaga
- first_name: Atsushi
  full_name: Watanabe, Atsushi
  last_name: Watanabe
- first_name: Norihiko
  full_name: Yokoi, Norihiko
  last_name: Yokoi
- first_name: Katsuhiko
  full_name: Tabuchi, Katsuhiko
  last_name: Tabuchi
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Roger
  full_name: Nicoll, Roger A
  last_name: Nicoll
- first_name: Masaki
  full_name: Fukata, Masaki
  last_name: Fukata
citation:
  ama: Fukata Y, Lovero K, Iwanaga T, et al. Disruption of LGI1-linked synaptic complex
    causes abnormal synaptic transmission and epilepsy. <i>PNAS</i>. 2010;107(8):3799-3804.
    doi:<a href="https://doi.org/10.1073/pnas.0914537107">10.1073/pnas.0914537107</a>
  apa: Fukata, Y., Lovero, K., Iwanaga, T., Watanabe, A., Yokoi, N., Tabuchi, K.,
    … Fukata, M. (2010). Disruption of LGI1-linked synaptic complex causes abnormal
    synaptic transmission and epilepsy. <i>PNAS</i>. National Academy of Sciences.
    <a href="https://doi.org/10.1073/pnas.0914537107">https://doi.org/10.1073/pnas.0914537107</a>
  chicago: Fukata, Yuko, Kathryn Lovero, Tsuyoshi Iwanaga, Atsushi Watanabe, Norihiko
    Yokoi, Katsuhiko Tabuchi, Ryuichi Shigemoto, Roger Nicoll, and Masaki Fukata.
    “Disruption of LGI1-Linked Synaptic Complex Causes Abnormal Synaptic Transmission
    and Epilepsy.” <i>PNAS</i>. National Academy of Sciences, 2010. <a href="https://doi.org/10.1073/pnas.0914537107">https://doi.org/10.1073/pnas.0914537107</a>.
  ieee: Y. Fukata <i>et al.</i>, “Disruption of LGI1-linked synaptic complex causes
    abnormal synaptic transmission and epilepsy,” <i>PNAS</i>, vol. 107, no. 8. National
    Academy of Sciences, pp. 3799–3804, 2010.
  ista: Fukata Y, Lovero K, Iwanaga T, Watanabe A, Yokoi N, Tabuchi K, Shigemoto R,
    Nicoll R, Fukata M. 2010. Disruption of LGI1-linked synaptic complex causes abnormal
    synaptic transmission and epilepsy. PNAS. 107(8), 3799–3804.
  mla: Fukata, Yuko, et al. “Disruption of LGI1-Linked Synaptic Complex Causes Abnormal
    Synaptic Transmission and Epilepsy.” <i>PNAS</i>, vol. 107, no. 8, National Academy
    of Sciences, 2010, pp. 3799–804, doi:<a href="https://doi.org/10.1073/pnas.0914537107">10.1073/pnas.0914537107</a>.
  short: Y. Fukata, K. Lovero, T. Iwanaga, A. Watanabe, N. Yokoi, K. Tabuchi, R. Shigemoto,
    R. Nicoll, M. Fukata, PNAS 107 (2010) 3799–3804.
date_created: 2018-12-11T11:58:03Z
date_published: 2010-02-23T00:00:00Z
date_updated: 2021-01-12T06:57:53Z
day: '23'
doi: 10.1073/pnas.0914537107
extern: 1
intvolume: '       107'
issue: '8'
month: '02'
page: 3799 - 3804
publication: PNAS
publication_status: published
publisher: National Academy of Sciences
publist_id: '4398'
quality_controlled: 0
status: public
title: Disruption of LGI1-linked synaptic complex causes abnormal synaptic transmission
  and epilepsy
type: journal_article
volume: 107
year: '2010'
...
---
_id: '2504'
abstract:
- lang: eng
  text: We present a method for immunolabeling of multiple species of membrane proteins
    with high spatial resolution. It allows differentiation of equally sized very
    small markers with different chemical compositions, which leads to high labeling
    efficiency and reduces steric hindrance of closely spaced immunolabeled biomolecules.
    Markers such as CdSe/ZnS semiconductor quantum dots and colloidal gold particles
    are distinguished by differential contrast in high-angle annular detector dark-field
    STEM mode or by EDX microanalysis of their elemental contents. This method was
    tested by observation of labeled AMPA- and NMDA-type glutamate receptors on sodium-dodecyl-sulfate-digested
    replica prepared from rat hippocampus. To improve particle visibility and detectability,
    the replica films were made exclusively with carbon to avoid the high background
    of conventional platinum/carbon replica. Extension of the method is suggested
    by detection of 1.4 nm nanogold particles and its potential application in the
    biological imaging research.
author:
- first_name: Alexandre
  full_name: Loukanov, Alexandre R
  last_name: Loukanov
- first_name: Naomi
  full_name: Kamasawa, Naomi
  last_name: Kamasawa
- first_name: Radostin
  full_name: Danev, Radostin S
  last_name: Danev
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Kuniaki
  full_name: Nagayama, Kuniaki
  last_name: Nagayama
citation:
  ama: Loukanov A, Kamasawa N, Danev R, Shigemoto R, Nagayama K. Immunolocalization
    of multiple membrane proteins on a carbon replica with STEM and EDX. <i>Ultramicroscopy</i>.
    2010;110(4):366-374. doi:<a href="https://doi.org/10.1016/j.ultramic.2010.01.016">10.1016/j.ultramic.2010.01.016</a>
  apa: Loukanov, A., Kamasawa, N., Danev, R., Shigemoto, R., &#38; Nagayama, K. (2010).
    Immunolocalization of multiple membrane proteins on a carbon replica with STEM
    and EDX. <i>Ultramicroscopy</i>. Elsevier. <a href="https://doi.org/10.1016/j.ultramic.2010.01.016">https://doi.org/10.1016/j.ultramic.2010.01.016</a>
  chicago: Loukanov, Alexandre, Naomi Kamasawa, Radostin Danev, Ryuichi Shigemoto,
    and Kuniaki Nagayama. “Immunolocalization of Multiple Membrane Proteins on a Carbon
    Replica with STEM and EDX.” <i>Ultramicroscopy</i>. Elsevier, 2010. <a href="https://doi.org/10.1016/j.ultramic.2010.01.016">https://doi.org/10.1016/j.ultramic.2010.01.016</a>.
  ieee: A. Loukanov, N. Kamasawa, R. Danev, R. Shigemoto, and K. Nagayama, “Immunolocalization
    of multiple membrane proteins on a carbon replica with STEM and EDX,” <i>Ultramicroscopy</i>,
    vol. 110, no. 4. Elsevier, pp. 366–374, 2010.
  ista: Loukanov A, Kamasawa N, Danev R, Shigemoto R, Nagayama K. 2010. Immunolocalization
    of multiple membrane proteins on a carbon replica with STEM and EDX. Ultramicroscopy.
    110(4), 366–374.
  mla: Loukanov, Alexandre, et al. “Immunolocalization of Multiple Membrane Proteins
    on a Carbon Replica with STEM and EDX.” <i>Ultramicroscopy</i>, vol. 110, no.
    4, Elsevier, 2010, pp. 366–74, doi:<a href="https://doi.org/10.1016/j.ultramic.2010.01.016">10.1016/j.ultramic.2010.01.016</a>.
  short: A. Loukanov, N. Kamasawa, R. Danev, R. Shigemoto, K. Nagayama, Ultramicroscopy
    110 (2010) 366–374.
date_created: 2018-12-11T11:58:03Z
date_published: 2010-03-01T00:00:00Z
date_updated: 2021-01-12T06:57:53Z
day: '01'
doi: 10.1016/j.ultramic.2010.01.016
extern: 1
intvolume: '       110'
issue: '4'
month: '03'
page: 366 - 374
publication: Ultramicroscopy
publication_status: published
publisher: Elsevier
publist_id: '4397'
quality_controlled: 0
status: public
title: Immunolocalization of multiple membrane proteins on a carbon replica with STEM
  and EDX
type: journal_article
volume: 110
year: '2010'
...
---
_id: '2505'
abstract:
- lang: eng
  text: Cbln1, secreted from cerebellar granule cells, and the orphan glutamate receptor
    52 (GluD2), expressed by Purkinje cells, are essential for synapse integrity between
    these neurons in adult mice. Nevertheless, no endogenous binding partners for
    these molecules have been identified. We found that Cblnl binds directly to the
    N-terminal domain of GluD2. GluD2 expression by postsynaptic cells, combined with
    exogenously applied Cbln1, was necessary and sufficient to induce new synapses
    in vitro and in the adult cerebellum in vivo. Further, beads coated with recombinant
    Cbln1 directly induced presynaptic differentiation and indirectly caused clustering
    of postsynaptic molecules via GluD2. These results indicate that the Cbln1-GluD2
    complex is a unique synapse organizer that acts bidirectionally on both pre- and
    postsynaptic components.
author:
- first_name: Keiko
  full_name: Matsuda, Keiko
  last_name: Matsuda
- first_name: Eriko
  full_name: Miura, Eriko
  last_name: Miura
- first_name: Taisuke
  full_name: Miyazaki, Taisuke
  last_name: Miyazaki
- first_name: Wataru
  full_name: Kakegawa, Wataru
  last_name: Kakegawa
- first_name: Kyoichi
  full_name: Emi, Kyoichi
  last_name: Emi
- first_name: Sakae
  full_name: Narumi, Sakae
  last_name: Narumi
- first_name: Yugo
  full_name: Fukazawa, Yugo
  last_name: Fukazawa
- first_name: Aya
  full_name: Ito-lshida, Aya
  last_name: Ito Lshida
- first_name: Tetsuro
  full_name: Kondo, Tetsuro
  last_name: Kondo
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Masahiko
  full_name: Watanabe, Masahiko
  last_name: Watanabe
- first_name: Michisuke
  full_name: Yuzaki, Michisuke
  last_name: Yuzaki
citation:
  ama: Matsuda K, Miura E, Miyazaki T, et al. Cbln1 is a ligand for an orphan glutamate
    receptor δ2, a bidirectional synapse organizer. <i>Science</i>. 2010;328(5976):363-368.
    doi:<a href="https://doi.org/10.1126/science.1185152">10.1126/science.1185152</a>
  apa: Matsuda, K., Miura, E., Miyazaki, T., Kakegawa, W., Emi, K., Narumi, S., …
    Yuzaki, M. (2010). Cbln1 is a ligand for an orphan glutamate receptor δ2, a bidirectional
    synapse organizer. <i>Science</i>. American Association for the Advancement of
    Science. <a href="https://doi.org/10.1126/science.1185152">https://doi.org/10.1126/science.1185152</a>
  chicago: Matsuda, Keiko, Eriko Miura, Taisuke Miyazaki, Wataru Kakegawa, Kyoichi
    Emi, Sakae Narumi, Yugo Fukazawa, et al. “Cbln1 Is a Ligand for an Orphan Glutamate
    Receptor Δ2, a Bidirectional Synapse Organizer.” <i>Science</i>. American Association
    for the Advancement of Science, 2010. <a href="https://doi.org/10.1126/science.1185152">https://doi.org/10.1126/science.1185152</a>.
  ieee: K. Matsuda <i>et al.</i>, “Cbln1 is a ligand for an orphan glutamate receptor
    δ2, a bidirectional synapse organizer,” <i>Science</i>, vol. 328, no. 5976. American
    Association for the Advancement of Science, pp. 363–368, 2010.
  ista: Matsuda K, Miura E, Miyazaki T, Kakegawa W, Emi K, Narumi S, Fukazawa Y, Ito
    Lshida A, Kondo T, Shigemoto R, Watanabe M, Yuzaki M. 2010. Cbln1 is a ligand
    for an orphan glutamate receptor δ2, a bidirectional synapse organizer. Science.
    328(5976), 363–368.
  mla: Matsuda, Keiko, et al. “Cbln1 Is a Ligand for an Orphan Glutamate Receptor
    Δ2, a Bidirectional Synapse Organizer.” <i>Science</i>, vol. 328, no. 5976, American
    Association for the Advancement of Science, 2010, pp. 363–68, doi:<a href="https://doi.org/10.1126/science.1185152">10.1126/science.1185152</a>.
  short: K. Matsuda, E. Miura, T. Miyazaki, W. Kakegawa, K. Emi, S. Narumi, Y. Fukazawa,
    A. Ito Lshida, T. Kondo, R. Shigemoto, M. Watanabe, M. Yuzaki, Science 328 (2010)
    363–368.
date_created: 2018-12-11T11:58:04Z
date_published: 2010-04-16T00:00:00Z
date_updated: 2021-01-12T06:57:53Z
day: '16'
doi: 10.1126/science.1185152
extern: 1
intvolume: '       328'
issue: '5976'
month: '04'
page: 363 - 368
publication: Science
publication_status: published
publisher: American Association for the Advancement of Science
publist_id: '4396'
quality_controlled: 0
status: public
title: Cbln1 is a ligand for an orphan glutamate receptor δ2, a bidirectional synapse
  organizer
type: journal_article
volume: 328
year: '2010'
...
---
_id: '2506'
abstract:
- lang: eng
  text: Subepithelial fibroblasts of the intestinal villi, which form a contractile
    cellular network beneath the epithelium, are in close contact with epithelial
    cells, nerve varicosities, capillaries, smooth muscles and immune cells, and secrete
    extracellular matrix molecules, growth factors and cytokines, etc. Cultured subepithelial
    fibroblasts of the rat duodenal villi display various receptors such as endothelins,
    ATP, substance-P and bradykinin, and release ATP in response to mechanical stimulation.
    In this study, the presence of functional NK1 receptors (NK1R) was pharmacologically
    confirmed in primary culture by Ca 2+ measurement, and the effects of substance-P
    were measured in an acute preparation of epithelium-free duodenal villi from 2-
    to 3-week-old rats using a two-photon laser microscope. Substance-P elicited an
    increase in the intracellular Ca 2+ concentration and contraction of the subepithelial
    fibroblasts in culture and the isolated villi. The localization of NK1R and substance-P
    in the villi was examined by light and electron microscopic immunohistochemistry.
    NK1R-like immunoreactivity was intensely localized on the plasma membrane of villous
    subepithelial fibroblasts in 10-day- to 4-week-old rats and mice and was decreased
    or absent in adulthood. The pericryptal fibroblasts of the small and large intestine
    were NK1R immuno-negative. These villous subepithelial fibroblasts form synapse-like
    structures with both substance-P-immunopositive and -immunonegative nerve varicosities.
    Here, we propose that the mutual interaction between villous subepithelial fibroblasts
    and afferent neurons via substance-P and ATP plays important roles in the maturation
    of the structure and function of the small intestine.
author:
- first_name: Sonoko
  full_name: Furuya, Sonoko
  last_name: Furuya
- first_name: Kishio
  full_name: Furuya, Kishio
  last_name: Furuya
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Masahiro
  full_name: Sokabe, Masahiro
  last_name: Sokabe
citation:
  ama: Furuya S, Furuya K, Shigemoto R, Sokabe M. Localization of NK1 receptors and
    roles of substance-P in subepithelial fibroblasts of rat intestinal villi. <i>Cell
    and Tissue Research</i>. 2010;342(2):243-259. doi:<a href="https://doi.org/10.1007/s00441-010-1056-7">10.1007/s00441-010-1056-7</a>
  apa: Furuya, S., Furuya, K., Shigemoto, R., &#38; Sokabe, M. (2010). Localization
    of NK1 receptors and roles of substance-P in subepithelial fibroblasts of rat
    intestinal villi. <i>Cell and Tissue Research</i>. Springer. <a href="https://doi.org/10.1007/s00441-010-1056-7">https://doi.org/10.1007/s00441-010-1056-7</a>
  chicago: Furuya, Sonoko, Kishio Furuya, Ryuichi Shigemoto, and Masahiro Sokabe.
    “Localization of NK1 Receptors and Roles of Substance-P in Subepithelial Fibroblasts
    of Rat Intestinal Villi.” <i>Cell and Tissue Research</i>. Springer, 2010. <a
    href="https://doi.org/10.1007/s00441-010-1056-7">https://doi.org/10.1007/s00441-010-1056-7</a>.
  ieee: S. Furuya, K. Furuya, R. Shigemoto, and M. Sokabe, “Localization of NK1 receptors
    and roles of substance-P in subepithelial fibroblasts of rat intestinal villi,”
    <i>Cell and Tissue Research</i>, vol. 342, no. 2. Springer, pp. 243–259, 2010.
  ista: Furuya S, Furuya K, Shigemoto R, Sokabe M. 2010. Localization of NK1 receptors
    and roles of substance-P in subepithelial fibroblasts of rat intestinal villi.
    Cell and Tissue Research. 342(2), 243–259.
  mla: Furuya, Sonoko, et al. “Localization of NK1 Receptors and Roles of Substance-P
    in Subepithelial Fibroblasts of Rat Intestinal Villi.” <i>Cell and Tissue Research</i>,
    vol. 342, no. 2, Springer, 2010, pp. 243–59, doi:<a href="https://doi.org/10.1007/s00441-010-1056-7">10.1007/s00441-010-1056-7</a>.
  short: S. Furuya, K. Furuya, R. Shigemoto, M. Sokabe, Cell and Tissue Research 342
    (2010) 243–259.
date_created: 2018-12-11T11:58:04Z
date_published: 2010-11-01T00:00:00Z
date_updated: 2021-01-12T06:57:54Z
day: '01'
doi: 10.1007/s00441-010-1056-7
extern: 1
intvolume: '       342'
issue: '2'
month: '11'
page: 243 - 259
publication: Cell and Tissue Research
publication_status: published
publisher: Springer
publist_id: '4395'
quality_controlled: 0
status: public
title: Localization of NK1 receptors and roles of substance-P in subepithelial fibroblasts
  of rat intestinal villi
type: journal_article
volume: 342
year: '2010'
...
---
_id: '2507'
abstract:
- lang: eng
  text: T-type calcium channels play a pivotal role in regulating neural membrane
    excitability in the nervous system. However, the precise subcellular distributions
    of T-type channel subunits and their implication for membrane excitability are
    not well understood. Here we investigated the subcellular distribution of the
    α1G subunit of the calcium channel which is expressed highly in the mouse dorsal
    lateral geniculate nucleus (dLGN). Light microscopic analysis demonstrated that
    dLGN exhibits intense immunoperoxidase reactivity for the α1G subunit. Electron
    microscopic observation showed that the labeling was present in both the relay
    cells and interneurons and was found in the somatodendritic, but not axonal, domains
    of these cells. Most of the immunogold particles for the α1G subunit were either
    associated with the plasma membrane or the intracellular membranes. Reconstruction
    analysis of serial electron microscopic images revealed that the intensity of
    the intracellular labeling exhibited a gradient such that the labeling density
    was higher in the proximal dendrite and progressively decreased towards the distal
    dendrite. In contrast, the plasma membrane-associated particles were distributed
    with a uniform density over the somatodendritic surface of dLGN cells. The labeling
    density in the relay cell plasma membrane was about 3-fold higher than that of
    the interneurons. These results provide ultrastructural evidence for cell-type-specific
    expression levels and for uniform expression density of the α1G subunit over the
    plasma membrane of dLGN cells.
author:
- first_name: Laxmi
  full_name: Parajuli, Laxmi K
  last_name: Parajuli
- first_name: Yugo
  full_name: Fukazawa, Yugo
  last_name: Fukazawa
- first_name: Masahiko
  full_name: Watanabe, Masahiko
  last_name: Watanabe
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
citation:
  ama: Parajuli L, Fukazawa Y, Watanabe M, Shigemoto R. Subcellular distribution of
    α1G subunit of T-type calcium channel in the mouse dorsal lateral geniculate nucleus.
    <i>Journal of Comparative Neurology</i>. 2010;518(21):4362-4374. doi:<a href="https://doi.org/10.1002/cne.22461">10.1002/cne.22461</a>
  apa: Parajuli, L., Fukazawa, Y., Watanabe, M., &#38; Shigemoto, R. (2010). Subcellular
    distribution of α1G subunit of T-type calcium channel in the mouse dorsal lateral
    geniculate nucleus. <i>Journal of Comparative Neurology</i>. Wiley-Blackwell.
    <a href="https://doi.org/10.1002/cne.22461">https://doi.org/10.1002/cne.22461</a>
  chicago: Parajuli, Laxmi, Yugo Fukazawa, Masahiko Watanabe, and Ryuichi Shigemoto.
    “Subcellular Distribution of Α1G Subunit of T-Type Calcium Channel in the Mouse
    Dorsal Lateral Geniculate Nucleus.” <i>Journal of Comparative Neurology</i>. Wiley-Blackwell,
    2010. <a href="https://doi.org/10.1002/cne.22461">https://doi.org/10.1002/cne.22461</a>.
  ieee: L. Parajuli, Y. Fukazawa, M. Watanabe, and R. Shigemoto, “Subcellular distribution
    of α1G subunit of T-type calcium channel in the mouse dorsal lateral geniculate
    nucleus,” <i>Journal of Comparative Neurology</i>, vol. 518, no. 21. Wiley-Blackwell,
    pp. 4362–4374, 2010.
  ista: Parajuli L, Fukazawa Y, Watanabe M, Shigemoto R. 2010. Subcellular distribution
    of α1G subunit of T-type calcium channel in the mouse dorsal lateral geniculate
    nucleus. Journal of Comparative Neurology. 518(21), 4362–4374.
  mla: Parajuli, Laxmi, et al. “Subcellular Distribution of Α1G Subunit of T-Type
    Calcium Channel in the Mouse Dorsal Lateral Geniculate Nucleus.” <i>Journal of
    Comparative Neurology</i>, vol. 518, no. 21, Wiley-Blackwell, 2010, pp. 4362–74,
    doi:<a href="https://doi.org/10.1002/cne.22461">10.1002/cne.22461</a>.
  short: L. Parajuli, Y. Fukazawa, M. Watanabe, R. Shigemoto, Journal of Comparative
    Neurology 518 (2010) 4362–4374.
date_created: 2018-12-11T11:58:04Z
date_published: 2010-11-01T00:00:00Z
date_updated: 2021-01-12T06:57:54Z
day: '01'
doi: 10.1002/cne.22461
extern: 1
intvolume: '       518'
issue: '21'
month: '11'
page: 4362 - 4374
publication: Journal of Comparative Neurology
publication_status: published
publisher: Wiley-Blackwell
publist_id: '4394'
quality_controlled: 0
status: public
title: Subcellular distribution of α1G subunit of T-type calcium channel in the mouse
  dorsal lateral geniculate nucleus
type: journal_article
volume: 518
year: '2010'
...
---
_id: '2508'
abstract:
- lang: eng
  text: 'The activity patterns of subthalamic nucleus (STN) neurons are intimately
    linked to motor function and dysfunction and arise through the complex interaction
    of intrinsic properties and inhibitory and excitatory synaptic inputs. In many
    neurons, hyperpolarization-activated cyclic nucleotide-gated (HCN) channels play
    key roles in intrinsic excitability and synaptic integration both under normal
    conditions and in disease states. However, in STN neurons, which strongly express
    HCN channels, their roles remain relatively obscure. To address this deficit,
    complementary molecular and cellular electrophysiological, imaging, and computational
    approaches were applied to the rat STN. Molecular profiling demonstrated that
    individual STN neurons express mRNA encoding several HCN subunits, with HCN2 and
    3 being the most abundant. Light and electron microscopic analysis showed that
    HCN2 subunits are strongly expressed and distributed throughout the somatodendritic
    plasma membrane. Voltage-, current-, and dynamic-clamp analysis, two-photon Ca
    2+ imaging, and computational modeling revealed that HCN channels are activated
    by GABA A receptor-mediated inputs and thus limit synaptic hyperpolarization and
    deinactivation of low-voltage-activated Ca 2+ channels. Although HCN channels
    also limited the temporal summation of EPSPs, generated through two-photon uncaging
    of glutamate, this action was largely shunted by GABAergic inhibition that was
    necessary for HCN channel activation. Together the data demonstrate that HCN channels
    in STN neurons selectively counteract GABA A receptor-mediated inhibition arising
    from the globus pallidus and thus promote single-spike activity rather than rebound
    burst firing. '
author:
- first_name: Jeremy
  full_name: Atherton, Jeremy F
  last_name: Atherton
- first_name: Katsunori
  full_name: Kitano, Katsunori
  last_name: Kitano
- first_name: Jérôme
  full_name: Baufreton, Jérôme
  last_name: Baufreton
- first_name: Kai
  full_name: Fan, Kai
  last_name: Fan
- first_name: David
  full_name: Wokosin, David L
  last_name: Wokosin
- first_name: Tatiana
  full_name: Tkatch, Tatiana
  last_name: Tkatch
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: James
  full_name: Surmeier, James D
  last_name: Surmeier
- first_name: Mark
  full_name: Bevan, Mark D
  last_name: Bevan
citation:
  ama: Atherton J, Kitano K, Baufreton J, et al. Selective participation of somatodendritic
    HCN channels in inhibitory but not excitatory synaptic integration in neurons
    of the subthalamic nucleus. <i>Journal of Neuroscience</i>. 2010;30(47):16025-16040.
    doi:<a href="https://doi.org/10.1523/JNEUROSCI.3898-10.2010">10.1523/JNEUROSCI.3898-10.2010</a>
  apa: Atherton, J., Kitano, K., Baufreton, J., Fan, K., Wokosin, D., Tkatch, T.,
    … Bevan, M. (2010). Selective participation of somatodendritic HCN channels in
    inhibitory but not excitatory synaptic integration in neurons of the subthalamic
    nucleus. <i>Journal of Neuroscience</i>. Society for Neuroscience. <a href="https://doi.org/10.1523/JNEUROSCI.3898-10.2010">https://doi.org/10.1523/JNEUROSCI.3898-10.2010</a>
  chicago: Atherton, Jeremy, Katsunori Kitano, Jérôme Baufreton, Kai Fan, David Wokosin,
    Tatiana Tkatch, Ryuichi Shigemoto, James Surmeier, and Mark Bevan. “Selective
    Participation of Somatodendritic HCN Channels in Inhibitory but Not Excitatory
    Synaptic Integration in Neurons of the Subthalamic Nucleus.” <i>Journal of Neuroscience</i>.
    Society for Neuroscience, 2010. <a href="https://doi.org/10.1523/JNEUROSCI.3898-10.2010">https://doi.org/10.1523/JNEUROSCI.3898-10.2010</a>.
  ieee: J. Atherton <i>et al.</i>, “Selective participation of somatodendritic HCN
    channels in inhibitory but not excitatory synaptic integration in neurons of the
    subthalamic nucleus,” <i>Journal of Neuroscience</i>, vol. 30, no. 47. Society
    for Neuroscience, pp. 16025–16040, 2010.
  ista: Atherton J, Kitano K, Baufreton J, Fan K, Wokosin D, Tkatch T, Shigemoto R,
    Surmeier J, Bevan M. 2010. Selective participation of somatodendritic HCN channels
    in inhibitory but not excitatory synaptic integration in neurons of the subthalamic
    nucleus. Journal of Neuroscience. 30(47), 16025–16040.
  mla: Atherton, Jeremy, et al. “Selective Participation of Somatodendritic HCN Channels
    in Inhibitory but Not Excitatory Synaptic Integration in Neurons of the Subthalamic
    Nucleus.” <i>Journal of Neuroscience</i>, vol. 30, no. 47, Society for Neuroscience,
    2010, pp. 16025–40, doi:<a href="https://doi.org/10.1523/JNEUROSCI.3898-10.2010">10.1523/JNEUROSCI.3898-10.2010</a>.
  short: J. Atherton, K. Kitano, J. Baufreton, K. Fan, D. Wokosin, T. Tkatch, R. Shigemoto,
    J. Surmeier, M. Bevan, Journal of Neuroscience 30 (2010) 16025–16040.
date_created: 2018-12-11T11:58:05Z
date_published: 2010-11-24T00:00:00Z
date_updated: 2021-01-12T06:57:54Z
day: '24'
doi: 10.1523/JNEUROSCI.3898-10.2010
extern: 1
intvolume: '        30'
issue: '47'
month: '11'
page: 16025 - 16040
publication: Journal of Neuroscience
publication_status: published
publisher: Society for Neuroscience
publist_id: '4393'
quality_controlled: 0
status: public
title: Selective participation of somatodendritic HCN channels in inhibitory but not
  excitatory synaptic integration in neurons of the subthalamic nucleus
type: journal_article
volume: 30
year: '2010'
...
---
_id: '2509'
abstract:
- lang: eng
  text: Hippocampal CA1 pyramidal cells, which receive γ-aminobutyric acid (GABA)ergic
    input from at least 18 types of presynaptic neuron, express 14 subunits of the
    pentameric GABAA receptor. The relative contribution of any subunit to synaptic
    and extrasynaptic receptors influences the dynamics of GABA and drug actions.
    Synaptic receptors mediate phasic GABA-evoked conductance and extrasynaptic receptors
    contribute to a tonic conductance. We used freeze-fracture replica-immunogold
    labelling, a sensitive quantitative immunocytochemical method, to detect synaptic
    and extrasynaptic pools of the alpha1, alpha2 and beta3 subunits. Antibodies to
    the cytoplasmic loop of the subunits showed immunogold particles concentrated
    on distinct clusters of intramembrane particles (IMPs) on the cytoplasmic face
    of the plasma membrane on the somata, dendrites and axon initial segments, with
    an abrupt decrease in labelling at the edge of the IMP cluster. Neuroligin-2,
    a GABAergic synapse-specific adhesion molecule, co-labels all beta3 subunit-rich
    IMP clusters, therefore we considered them synapses. Double-labelling for two
    subunits showed that virtually all somatic synapses contain the alpha1, alpha2
    and beta3 subunits. The extrasynaptic plasma membrane of the somata, dendrites
    and dendritic spines showed low-density immunolabelling. Synaptic labelling densities
    on somata for the alpha1, alpha2 and beta3 subunits were 78-132, 94 and 79 times
    higher than on the extrasynaptic membranes, respectively. As GABAergic synapses
    occupy 0.72% of the soma surface, the fraction of synaptic labelling was 33-48
    (alpha1), 40 (alpha2) and 36 (beta3)% of the total somatic surface immunolabelling.
    Assuming similar antibody access to all receptors, about 60% of these subunits
    are in extrasynaptic receptors.
author:
- first_name: Yu
  full_name: Kasugai, Yu
  last_name: Kasugai
- first_name: Jerome
  full_name: Swinny, Jerome D
  last_name: Swinny
- first_name: John
  full_name: Roberts, John D
  last_name: Roberts
- first_name: Yannis
  full_name: Dalezios, Yannis
  last_name: Dalezios
- first_name: Yugo
  full_name: Fukazawa, Yugo
  last_name: Fukazawa
- first_name: Werner
  full_name: Sieghart, Werner C
  last_name: Sieghart
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Péter
  full_name: Somogyi, Péter
  last_name: Somogyi
citation:
  ama: Kasugai Y, Swinny J, Roberts J, et al. Quantitative localisation of synaptic
    and extrasynaptic GABAA receptor subunits on hippocampal pyramidal cells by freeze-fracture
    replica immunolabelling. <i>European Journal of Neuroscience</i>. 2010;32(11):1868-1888.
    doi:<a href="https://doi.org/10.1111/j.1460-9568.2010.07473.x">10.1111/j.1460-9568.2010.07473.x</a>
  apa: Kasugai, Y., Swinny, J., Roberts, J., Dalezios, Y., Fukazawa, Y., Sieghart,
    W., … Somogyi, P. (2010). Quantitative localisation of synaptic and extrasynaptic
    GABAA receptor subunits on hippocampal pyramidal cells by freeze-fracture replica
    immunolabelling. <i>European Journal of Neuroscience</i>. Wiley-Blackwell. <a
    href="https://doi.org/10.1111/j.1460-9568.2010.07473.x">https://doi.org/10.1111/j.1460-9568.2010.07473.x</a>
  chicago: Kasugai, Yu, Jerome Swinny, John Roberts, Yannis Dalezios, Yugo Fukazawa,
    Werner Sieghart, Ryuichi Shigemoto, and Péter Somogyi. “Quantitative Localisation
    of Synaptic and Extrasynaptic GABAA Receptor Subunits on Hippocampal Pyramidal
    Cells by Freeze-Fracture Replica Immunolabelling.” <i>European Journal of Neuroscience</i>.
    Wiley-Blackwell, 2010. <a href="https://doi.org/10.1111/j.1460-9568.2010.07473.x">https://doi.org/10.1111/j.1460-9568.2010.07473.x</a>.
  ieee: Y. Kasugai <i>et al.</i>, “Quantitative localisation of synaptic and extrasynaptic
    GABAA receptor subunits on hippocampal pyramidal cells by freeze-fracture replica
    immunolabelling,” <i>European Journal of Neuroscience</i>, vol. 32, no. 11. Wiley-Blackwell,
    pp. 1868–1888, 2010.
  ista: Kasugai Y, Swinny J, Roberts J, Dalezios Y, Fukazawa Y, Sieghart W, Shigemoto
    R, Somogyi P. 2010. Quantitative localisation of synaptic and extrasynaptic GABAA
    receptor subunits on hippocampal pyramidal cells by freeze-fracture replica immunolabelling.
    European Journal of Neuroscience. 32(11), 1868–1888.
  mla: Kasugai, Yu, et al. “Quantitative Localisation of Synaptic and Extrasynaptic
    GABAA Receptor Subunits on Hippocampal Pyramidal Cells by Freeze-Fracture Replica
    Immunolabelling.” <i>European Journal of Neuroscience</i>, vol. 32, no. 11, Wiley-Blackwell,
    2010, pp. 1868–88, doi:<a href="https://doi.org/10.1111/j.1460-9568.2010.07473.x">10.1111/j.1460-9568.2010.07473.x</a>.
  short: Y. Kasugai, J. Swinny, J. Roberts, Y. Dalezios, Y. Fukazawa, W. Sieghart,
    R. Shigemoto, P. Somogyi, European Journal of Neuroscience 32 (2010) 1868–1888.
date_created: 2018-12-11T11:58:05Z
date_published: 2010-11-14T00:00:00Z
date_updated: 2021-01-12T06:57:55Z
day: '14'
doi: 10.1111/j.1460-9568.2010.07473.x
extern: 1
intvolume: '        32'
issue: '11'
month: '11'
page: 1868 - 1888
publication: European Journal of Neuroscience
publication_status: published
publisher: Wiley-Blackwell
publist_id: '4392'
quality_controlled: 0
status: public
title: Quantitative localisation of synaptic and extrasynaptic GABAA receptor subunits
  on hippocampal pyramidal cells by freeze-fracture replica immunolabelling
type: journal_article
volume: 32
year: '2010'
...
