---
_id: '376'
abstract:
- lang: eng
  text: The compositional versatility of I2–II–IV–VI4 tetrahedrally-coordinated compounds
    allows for accommodating their functional properties to numerous technological
    applications. Among them, Cu2ZnSnSe4 is an emerging photovoltaic material and
    Cu2CdSnSe4 displays excellent thermoelectric properties. The third compound of
    this family, Cu2HgSnSe4, remains relatively unexplored. Herein, a synthetic route
    to produce Cu2HgSnSe4 nanoparticles with narrow size distribution and controlled
    composition is presented. Cu2HgSnSe4 nanoparticles were subsequently used as building
    blocks to produce bulk nanocrystalline materials, whose thermoelectric properties
    were analyzed. A very preliminary adjustment of the material composition yielded
    Seebeck coefficients up to 160 μV K−1, electrical conductivities close to 104
    S m−1 and thermal conductivities down to 0.5 W m−1 K−1.
author:
- first_name: Wenhua
  full_name: Li, Wenhua
  last_name: Li
- first_name: Maria
  full_name: Ibáñez, Maria
  id: 43C61214-F248-11E8-B48F-1D18A9856A87
  last_name: Ibáñez
  orcid: 0000-0001-5013-2843
- first_name: Reza
  full_name: Zamani, Reza
  last_name: Zamani
- first_name: Nuria
  full_name: García Castelló, Nuria
  last_name: García Castelló
- first_name: Grosse
  full_name: Stéphane, Grosse
  last_name: Stéphane
- first_name: Doris
  full_name: Cadavid, Doris
  last_name: Cadavid
- first_name: Joan
  full_name: Prades, Joan
  last_name: Prades
- first_name: Jordi
  full_name: Arbiol, Jordi
  last_name: Arbiol
- first_name: Andreu
  full_name: Cabot, Andreu
  last_name: Cabot
citation:
  ama: 'Li W, Ibáñez M, Zamani R, et al. Cu2HgSnSe4 nanoparticles: synthesis and thermoelectric
    properties. <i>CrystEngComm</i>. 2013;44:8966-8971. doi:<a href="https://doi.org/10.1039/C3CE41583J">10.1039/C3CE41583J</a>'
  apa: 'Li, W., Ibáñez, M., Zamani, R., García Castelló, N., Stéphane, G., Cadavid,
    D., … Cabot, A. (2013). Cu2HgSnSe4 nanoparticles: synthesis and thermoelectric
    properties. <i>CrystEngComm</i>. Royal Society of Chemistry. <a href="https://doi.org/10.1039/C3CE41583J">https://doi.org/10.1039/C3CE41583J</a>'
  chicago: 'Li, Wenhua, Maria Ibáñez, Reza Zamani, Nuria García Castelló, Grosse Stéphane,
    Doris Cadavid, Joan Prades, Jordi Arbiol, and Andreu Cabot. “Cu2HgSnSe4 Nanoparticles:
    Synthesis and Thermoelectric Properties.” <i>CrystEngComm</i>. Royal Society of
    Chemistry, 2013. <a href="https://doi.org/10.1039/C3CE41583J">https://doi.org/10.1039/C3CE41583J</a>.'
  ieee: 'W. Li <i>et al.</i>, “Cu2HgSnSe4 nanoparticles: synthesis and thermoelectric
    properties,” <i>CrystEngComm</i>, vol. 44. Royal Society of Chemistry, pp. 8966–8971,
    2013.'
  ista: 'Li W, Ibáñez M, Zamani R, García Castelló N, Stéphane G, Cadavid D, Prades
    J, Arbiol J, Cabot A. 2013. Cu2HgSnSe4 nanoparticles: synthesis and thermoelectric
    properties. CrystEngComm. 44, 8966–8971.'
  mla: 'Li, Wenhua, et al. “Cu2HgSnSe4 Nanoparticles: Synthesis and Thermoelectric
    Properties.” <i>CrystEngComm</i>, vol. 44, Royal Society of Chemistry, 2013, pp.
    8966–71, doi:<a href="https://doi.org/10.1039/C3CE41583J">10.1039/C3CE41583J</a>.'
  short: W. Li, M. Ibáñez, R. Zamani, N. García Castelló, G. Stéphane, D. Cadavid,
    J. Prades, J. Arbiol, A. Cabot, CrystEngComm 44 (2013) 8966–8971.
date_created: 2018-12-11T11:46:07Z
date_published: 2013-09-23T00:00:00Z
date_updated: 2021-01-12T07:52:00Z
day: '23'
doi: 10.1039/C3CE41583J
extern: '1'
intvolume: '        44'
language:
- iso: eng
month: '09'
oa_version: None
page: 8966 - 8971
publication: CrystEngComm
publication_status: published
publisher: Royal Society of Chemistry
publist_id: '7453'
quality_controlled: '1'
status: public
title: 'Cu2HgSnSe4 nanoparticles: synthesis and thermoelectric properties'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 44
year: '2013'
...
---
_id: '378'
abstract:
- lang: eng
  text: Until recently, to prepare nanocrystals of a new material, scientists searched
    their shelves for the appropriate molecular precursors, surfactants, and solvents.
    They then optimized the reaction conditions for the atoms to self-assemble into
    monodisperse nanocrystals (1). This approach is being replaced by a simpler strategy,
    in which preformed nanocrystals serve as templates to produce nanoparticles with
    a different composition through chemical transformation. On page 964 of this issue,
    Oh et al. (2) report a powerful mechanism that allows the composition of oxide
    nanoparticles to be transformed in solution and at low temperatures.
article_processing_charge: No
author:
- first_name: Maria
  full_name: Ibáñez, Maria
  id: 43C61214-F248-11E8-B48F-1D18A9856A87
  last_name: Ibáñez
  orcid: 0000-0001-5013-2843
- first_name: Andreu
  full_name: Cabot, Andreu
  last_name: Cabot
citation:
  ama: Ibáñez M, Cabot A. All change for nanocrystals. <i>Science</i>. 2013;340(6135):935-936.
    doi:<a href="https://doi.org/10.1126/science.1239221">10.1126/science.1239221</a>
  apa: Ibáñez, M., &#38; Cabot, A. (2013). All change for nanocrystals. <i>Science</i>.
    American Association for the Advancement of Science. <a href="https://doi.org/10.1126/science.1239221">https://doi.org/10.1126/science.1239221</a>
  chicago: Ibáñez, Maria, and Andreu Cabot. “All Change for Nanocrystals.” <i>Science</i>.
    American Association for the Advancement of Science, 2013. <a href="https://doi.org/10.1126/science.1239221">https://doi.org/10.1126/science.1239221</a>.
  ieee: M. Ibáñez and A. Cabot, “All change for nanocrystals,” <i>Science</i>, vol.
    340, no. 6135. American Association for the Advancement of Science, pp. 935–936,
    2013.
  ista: Ibáñez M, Cabot A. 2013. All change for nanocrystals. Science. 340(6135),
    935–936.
  mla: Ibáñez, Maria, and Andreu Cabot. “All Change for Nanocrystals.” <i>Science</i>,
    vol. 340, no. 6135, American Association for the Advancement of Science, 2013,
    pp. 935–36, doi:<a href="https://doi.org/10.1126/science.1239221">10.1126/science.1239221</a>.
  short: M. Ibáñez, A. Cabot, Science 340 (2013) 935–936.
date_created: 2018-12-11T11:46:08Z
date_published: 2013-05-24T00:00:00Z
date_updated: 2021-01-12T07:52:09Z
day: '24'
doi: 10.1126/science.1239221
extern: '1'
intvolume: '       340'
issue: '6135'
language:
- iso: eng
month: '05'
oa_version: None
page: 935 - 936
publication: Science
publication_status: published
publisher: American Association for the Advancement of Science
publist_id: '7451'
status: public
title: All change for nanocrystals
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 340
year: '2013'
...
---
_id: '450'
abstract:
- lang: eng
  text: Understanding the relative importance of heterosis and outbreeding depression
    over multiple generations is a key question in evolutionary biology and is essential
    for identifying appropriate genetic sources for population and ecosystem restoration.
    Here we use 2455 experimental crosses between 12 population pairs of the rare
    perennial plant Rutidosis leptorrhynchoides (Asteraceae) to investigate the multi-generational
    (F1, F2, F3) fitness outcomes of inter-population hybridization. We detected no
    evidence of outbreeding depression, with inter-population hybrids and backcrosses
    showing either similar fitness or significant heterosis for fitness components
    across the three generations. Variation in heterosis among population pairs was
    best explained by characteristics of the foreign source or home population, and
    was greatest when the source population was large, with high genetic diversity
    and low inbreeding, and the home population was small and inbred. Our results
    indicate that the primary consideration for maximizing progeny fitness following
    population augmentation or restoration is the use of seed from large, genetically
    diverse populations.
article_number: '2058'
author:
- first_name: Melinda
  full_name: Pickup, Melinda
  id: 2C78037E-F248-11E8-B48F-1D18A9856A87
  last_name: Pickup
  orcid: 0000-0001-6118-0541
- first_name: David
  full_name: Field, David
  id: 419049E2-F248-11E8-B48F-1D18A9856A87
  last_name: Field
  orcid: 0000-0002-4014-8478
- first_name: David
  full_name: Rowell, David
  last_name: Rowell
- first_name: Andrew
  full_name: Young, Andrew
  last_name: Young
citation:
  ama: Pickup M, Field D, Rowell D, Young A. Source population characteristics affect
    heterosis following genetic rescue of fragmented plant populations. <i>Proceedings
    of the Royal Society of London Series B Biological Sciences</i>. 2013;280(1750).
    doi:<a href="https://doi.org/10.1098/rspb.2012.2058">10.1098/rspb.2012.2058</a>
  apa: Pickup, M., Field, D., Rowell, D., &#38; Young, A. (2013). Source population
    characteristics affect heterosis following genetic rescue of fragmented plant
    populations. <i>Proceedings of the Royal Society of London Series B Biological
    Sciences</i>. Royal Society, The. <a href="https://doi.org/10.1098/rspb.2012.2058">https://doi.org/10.1098/rspb.2012.2058</a>
  chicago: Pickup, Melinda, David Field, David Rowell, and Andrew Young. “Source Population
    Characteristics Affect Heterosis Following Genetic Rescue of Fragmented Plant
    Populations.” <i>Proceedings of the Royal Society of London Series B Biological
    Sciences</i>. Royal Society, The, 2013. <a href="https://doi.org/10.1098/rspb.2012.2058">https://doi.org/10.1098/rspb.2012.2058</a>.
  ieee: M. Pickup, D. Field, D. Rowell, and A. Young, “Source population characteristics
    affect heterosis following genetic rescue of fragmented plant populations,” <i>Proceedings
    of the Royal Society of London Series B Biological Sciences</i>, vol. 280, no.
    1750. Royal Society, The, 2013.
  ista: Pickup M, Field D, Rowell D, Young A. 2013. Source population characteristics
    affect heterosis following genetic rescue of fragmented plant populations. Proceedings
    of the Royal Society of London Series B Biological Sciences. 280(1750), 2058.
  mla: Pickup, Melinda, et al. “Source Population Characteristics Affect Heterosis
    Following Genetic Rescue of Fragmented Plant Populations.” <i>Proceedings of the
    Royal Society of London Series B Biological Sciences</i>, vol. 280, no. 1750,
    2058, Royal Society, The, 2013, doi:<a href="https://doi.org/10.1098/rspb.2012.2058">10.1098/rspb.2012.2058</a>.
  short: M. Pickup, D. Field, D. Rowell, A. Young, Proceedings of the Royal Society
    of London Series B Biological Sciences 280 (2013).
date_created: 2018-12-11T11:46:32Z
date_published: 2013-01-07T00:00:00Z
date_updated: 2021-01-12T07:57:25Z
day: '07'
department:
- _id: NiBa
doi: 10.1098/rspb.2012.2058
external_id:
  pmid:
  - '23173202'
intvolume: '       280'
issue: '1750'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3574427/
month: '01'
oa: 1
oa_version: Submitted Version
pmid: 1
publication: Proceedings of the Royal Society of London Series B Biological Sciences
publication_status: published
publisher: Royal Society, The
publist_id: '7372'
quality_controlled: '1'
status: public
title: Source population characteristics affect heterosis following genetic rescue
  of fragmented plant populations
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 280
year: '2013'
...
---
_id: '2438'
abstract:
- lang: eng
  text: The colored Tverberg theorem asserts that for eve;ry d and r there exists
    t=t(d,r) such that for every set C ⊂ ℝ d of cardinality (d + 1)t, partitioned
    into t-point subsets C 1, C 2,...,C d+1 (which we think of as color classes; e.
    g., the points of C 1 are red, the points of C 2 blue, etc.), there exist r disjoint
    sets R 1, R 2,...,R r⊆C that are rainbow, meaning that {pipe}R i∩C j{pipe}≤1 for
    every i,j, and whose convex hulls all have a common point. All known proofs of
    this theorem are topological. We present a geometric version of a recent beautiful
    proof by Blagojević, Matschke, and Ziegler, avoiding a direct use of topological
    methods. The purpose of this de-topologization is to make the proof more concrete
    and intuitive, and accessible to a wider audience.
acknowledgement: 'We would like to thank Marek Krcál for useful discussions at initial
  stages of this research. We also thank Günter M. Ziegler for valuable comments,
  and Peter Landweber and two anonymous referees for detailed comments and corrections
  that greatly helped to improve the presentation. In particular, we are indebted
  to one of the referees for pointing out to us reference [19]. M. Tancer is supported
  by the grants SVV-2010-261313 (Discrete Methods and Algorithms) and GAUK 49209.
  U. Wagner’s research is supported by the Swiss National Science Foundation (SNF
  Projects 200021- 125309 and 200020-125027). '
author:
- first_name: Jiří
  full_name: Matoušek, Jiří
  last_name: Matoušek
- first_name: Martin
  full_name: Martin Tancer
  id: 38AC689C-F248-11E8-B48F-1D18A9856A87
  last_name: Tancer
  orcid: 0000-0002-1191-6714
- first_name: Uli
  full_name: Uli Wagner
  id: 36690CA2-F248-11E8-B48F-1D18A9856A87
  last_name: Wagner
  orcid: 0000-0002-1494-0568
citation:
  ama: Matoušek J, Tancer M, Wagner U. A geometric proof of the colored Tverberg theorem.
    <i>Discrete &#38; Computational Geometry</i>. 2012;47(2):245-265. doi:<a href="https://doi.org/10.1007/s00454-011-9368-2">10.1007/s00454-011-9368-2</a>
  apa: Matoušek, J., Tancer, M., &#38; Wagner, U. (2012). A geometric proof of the
    colored Tverberg theorem. <i>Discrete &#38; Computational Geometry</i>. Springer.
    <a href="https://doi.org/10.1007/s00454-011-9368-2">https://doi.org/10.1007/s00454-011-9368-2</a>
  chicago: Matoušek, Jiří, Martin Tancer, and Uli Wagner. “A Geometric Proof of the
    Colored Tverberg Theorem.” <i>Discrete &#38; Computational Geometry</i>. Springer,
    2012. <a href="https://doi.org/10.1007/s00454-011-9368-2">https://doi.org/10.1007/s00454-011-9368-2</a>.
  ieee: J. Matoušek, M. Tancer, and U. Wagner, “A geometric proof of the colored Tverberg
    theorem,” <i>Discrete &#38; Computational Geometry</i>, vol. 47, no. 2. Springer,
    pp. 245–265, 2012.
  ista: Matoušek J, Tancer M, Wagner U. 2012. A geometric proof of the colored Tverberg
    theorem. Discrete &#38; Computational Geometry. 47(2), 245–265.
  mla: Matoušek, Jiří, et al. “A Geometric Proof of the Colored Tverberg Theorem.”
    <i>Discrete &#38; Computational Geometry</i>, vol. 47, no. 2, Springer, 2012,
    pp. 245–65, doi:<a href="https://doi.org/10.1007/s00454-011-9368-2">10.1007/s00454-011-9368-2</a>.
  short: J. Matoušek, M. Tancer, U. Wagner, Discrete &#38; Computational Geometry
    47 (2012) 245–265.
date_created: 2018-12-11T11:57:39Z
date_published: 2012-03-01T00:00:00Z
date_updated: 2021-01-12T06:57:29Z
day: '01'
doi: 10.1007/s00454-011-9368-2
extern: 1
intvolume: '        47'
issue: '2'
month: '03'
page: 245 - 265
publication: Discrete & Computational Geometry
publication_status: published
publisher: Springer
publist_id: '4468'
quality_controlled: 0
status: public
title: A geometric proof of the colored Tverberg theorem
type: journal_article
volume: 47
year: '2012'
...
---
_id: '2439'
abstract:
- lang: eng
  text: A Monte Carlo approximation algorithm for the Tukey depth problem in high
    dimensions is introduced. The algorithm is a generalization of an algorithm presented
    by Rousseeuw and Struyf (1998) . The performance of this algorithm is studied
    both analytically and experimentally.
author:
- first_name: Dan
  full_name: Chen, Dan
  last_name: Chen
- first_name: Pat
  full_name: Morin, Pat
  last_name: Morin
- first_name: Uli
  full_name: Uli Wagner
  id: 36690CA2-F248-11E8-B48F-1D18A9856A87
  last_name: Wagner
  orcid: 0000-0002-1494-0568
citation:
  ama: 'Chen D, Morin P, Wagner U. Absolute approximation of Tukey depth: Theory and
    experiments. <i>Computational Geometry: Theory and Applications</i>. 2012;46(5):566-573.
    doi:<a href="https://doi.org/10.1016/j.comgeo.2012.03.001">10.1016/j.comgeo.2012.03.001</a>'
  apa: 'Chen, D., Morin, P., &#38; Wagner, U. (2012). Absolute approximation of Tukey
    depth: Theory and experiments. <i>Computational Geometry: Theory and Applications</i>.
    Elsevier. <a href="https://doi.org/10.1016/j.comgeo.2012.03.001">https://doi.org/10.1016/j.comgeo.2012.03.001</a>'
  chicago: 'Chen, Dan, Pat Morin, and Uli Wagner. “Absolute Approximation of Tukey
    Depth: Theory and Experiments.” <i>Computational Geometry: Theory and Applications</i>.
    Elsevier, 2012. <a href="https://doi.org/10.1016/j.comgeo.2012.03.001">https://doi.org/10.1016/j.comgeo.2012.03.001</a>.'
  ieee: 'D. Chen, P. Morin, and U. Wagner, “Absolute approximation of Tukey depth:
    Theory and experiments,” <i>Computational Geometry: Theory and Applications</i>,
    vol. 46, no. 5. Elsevier, pp. 566–573, 2012.'
  ista: 'Chen D, Morin P, Wagner U. 2012. Absolute approximation of Tukey depth: Theory
    and experiments. Computational Geometry: Theory and Applications. 46(5), 566–573.'
  mla: 'Chen, Dan, et al. “Absolute Approximation of Tukey Depth: Theory and Experiments.”
    <i>Computational Geometry: Theory and Applications</i>, vol. 46, no. 5, Elsevier,
    2012, pp. 566–73, doi:<a href="https://doi.org/10.1016/j.comgeo.2012.03.001">10.1016/j.comgeo.2012.03.001</a>.'
  short: 'D. Chen, P. Morin, U. Wagner, Computational Geometry: Theory and Applications
    46 (2012) 566–573.'
date_created: 2018-12-11T11:57:40Z
date_published: 2012-07-01T00:00:00Z
date_updated: 2021-01-12T06:57:29Z
day: '01'
doi: 10.1016/j.comgeo.2012.03.001
extern: 1
intvolume: '        46'
issue: '5'
month: '07'
page: 566 - 573
publication: 'Computational Geometry: Theory and Applications'
publication_status: published
publisher: Elsevier
publist_id: '4467'
quality_controlled: 0
status: public
title: 'Absolute approximation of Tukey depth: Theory and experiments'
type: journal_article
volume: 46
year: '2012'
...
---
_id: '244'
abstract:
- lang: eng
  text: We investigate the solubility of the congruence xy ≡ 1 (mod p), where p is
    a prime and x, y are restricted to lie in suitable short intervals. Our work relies
    on a mean value theorem for incomplete Kloosterman sums.
acknowledgement: "EP/E053262/1\tEngineering and Physical Sciences Research Council\tEPSRC,\nEP/J00149X/1\tEngineering
  and Physical Sciences Research Council\tEPSRC\t"
author:
- first_name: Timothy D
  full_name: Timothy Browning
  id: 35827D50-F248-11E8-B48F-1D18A9856A87
  last_name: Browning
  orcid: 0000-0002-8314-0177
- first_name: Alan
  full_name: Haynes, Alan K
  last_name: Haynes
citation:
  ama: Browning TD, Haynes A. Incomplete kloosterman sums and multiplicative inverses
    in short intervals. <i>International Journal of Number Theory</i>. 2012;9(2):481-486.
    doi:<a href="https://doi.org/ https://doi.org/10.1142/S1793042112501448"> https://doi.org/10.1142/S1793042112501448</a>
  apa: Browning, T. D., &#38; Haynes, A. (2012). Incomplete kloosterman sums and multiplicative
    inverses in short intervals. <i>International Journal of Number Theory</i>. World
    Scientific Publishing. <a href="https://doi.org/ https://doi.org/10.1142/S1793042112501448">https://doi.org/
    https://doi.org/10.1142/S1793042112501448</a>
  chicago: Browning, Timothy D, and Alan Haynes. “Incomplete Kloosterman Sums and
    Multiplicative Inverses in Short Intervals.” <i>International Journal of Number
    Theory</i>. World Scientific Publishing, 2012. <a href="https://doi.org/ https://doi.org/10.1142/S1793042112501448">https://doi.org/
    https://doi.org/10.1142/S1793042112501448</a>.
  ieee: T. D. Browning and A. Haynes, “Incomplete kloosterman sums and multiplicative
    inverses in short intervals,” <i>International Journal of Number Theory</i>, vol.
    9, no. 2. World Scientific Publishing, pp. 481–486, 2012.
  ista: Browning TD, Haynes A. 2012. Incomplete kloosterman sums and multiplicative
    inverses in short intervals. International Journal of Number Theory. 9(2), 481–486.
  mla: Browning, Timothy D., and Alan Haynes. “Incomplete Kloosterman Sums and Multiplicative
    Inverses in Short Intervals.” <i>International Journal of Number Theory</i>, vol.
    9, no. 2, World Scientific Publishing, 2012, pp. 481–86, doi:<a href="https://doi.org/
    https://doi.org/10.1142/S1793042112501448"> https://doi.org/10.1142/S1793042112501448</a>.
  short: T.D. Browning, A. Haynes, International Journal of Number Theory 9 (2012)
    481–486.
date_created: 2018-12-11T11:45:24Z
date_published: 2012-11-30T00:00:00Z
date_updated: 2021-01-12T06:57:30Z
day: '30'
doi: ' https://doi.org/10.1142/S1793042112501448'
extern: 1
intvolume: '         9'
issue: '2'
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1204.6374
month: '11'
oa: 1
page: 481 - 486
publication: International Journal of Number Theory
publication_status: published
publisher: World Scientific Publishing
publist_id: '7660'
quality_controlled: 0
status: public
title: Incomplete kloosterman sums and multiplicative inverses in short intervals
type: journal_article
volume: 9
year: '2012'
...
---
_id: '2440'
abstract:
- lang: eng
  text: We present an algorithm for computing [X, Y], i.e., all homotopy classes of
    continuous maps X → Y, where X, Y are topological spaces given as finite simplicial
    complexes, Y is (d - 1)-connected for some d ≥ 2 (for example, Y can be the d-dimensional
    sphere S d), and dim X ≤ 2d - 2. These conditions on X, Y guarantee that [X, Y]
    has a natural structure of a finitely generated Abelian group, and the algorithm
    finds generators and relations for it. We combine several tools and ideas from
    homotopy theory (such as Postnikov systems, simplicial sets, and obstruction theory)
    with algorithmic tools from effective algebraic topology (objects with effective
    homology). We hope that a further extension of the methods developed here will
    yield an algorithm for computing, in some cases of interest, the ℤ 2-index, which
    is a quantity playing a prominent role in Borsuk-Ulam style applications of topology
    in combinatorics and geometry, e.g., in topological lower bounds for the chromatic
    number of a graph. In a certain range of dimensions, deciding the embeddability
    of a simplicial complex into ℝ d also amounts to a ℤ 2-index computation. This
    is the main motivation of our work. We believe that investigating the computational
    complexity of questions in homotopy theory and similar areas presents a fascinating
    research area, and we hope that our work may help bridge the cultural gap between
    algebraic topology and theoretical computer science.
author:
- first_name: Martin
  full_name: Čadek, Martin
  last_name: Čadek
- first_name: Marek
  full_name: Marek Krcál
  id: 33E21118-F248-11E8-B48F-1D18A9856A87
  last_name: Krcál
- first_name: Jiří
  full_name: Matoušek, Jiří
  last_name: Matoušek
- first_name: Francis
  full_name: Sergeraert, Francis
  last_name: Sergeraert
- first_name: Lukáš
  full_name: Vokřínek, Lukáš
  last_name: Vokřínek
- first_name: Uli
  full_name: Uli Wagner
  id: 36690CA2-F248-11E8-B48F-1D18A9856A87
  last_name: Wagner
  orcid: 0000-0002-1494-0568
citation:
  ama: 'Čadek M, Krcál M, Matoušek J, Sergeraert F, Vokřínek L, Wagner U. Computing
    all maps into a sphere. In: SIAM; 2012:1-10.'
  apa: 'Čadek, M., Krcál, M., Matoušek, J., Sergeraert, F., Vokřínek, L., &#38; Wagner,
    U. (2012). Computing all maps into a sphere (pp. 1–10). Presented at the SODA:
    Symposium on Discrete Algorithms, SIAM.'
  chicago: Čadek, Martin, Marek Krcál, Jiří Matoušek, Francis Sergeraert, Lukáš Vokřínek,
    and Uli Wagner. “Computing All Maps into a Sphere,” 1–10. SIAM, 2012.
  ieee: 'M. Čadek, M. Krcál, J. Matoušek, F. Sergeraert, L. Vokřínek, and U. Wagner,
    “Computing all maps into a sphere,” presented at the SODA: Symposium on Discrete
    Algorithms, 2012, pp. 1–10.'
  ista: 'Čadek M, Krcál M, Matoušek J, Sergeraert F, Vokřínek L, Wagner U. 2012. Computing
    all maps into a sphere. SODA: Symposium on Discrete Algorithms, 1–10.'
  mla: Čadek, Martin, et al. <i>Computing All Maps into a Sphere</i>. SIAM, 2012,
    pp. 1–10.
  short: M. Čadek, M. Krcál, J. Matoušek, F. Sergeraert, L. Vokřínek, U. Wagner, in:,
    SIAM, 2012, pp. 1–10.
conference:
  name: 'SODA: Symposium on Discrete Algorithms'
date_created: 2018-12-11T11:57:40Z
date_published: 2012-01-01T00:00:00Z
date_updated: 2021-01-12T06:57:30Z
day: '01'
extern: 1
main_file_link:
- open_access: '0'
  url: http://arxiv.org/abs/1105.6257
month: '01'
page: 1 - 10
publication_status: published
publisher: SIAM
publist_id: '4466'
quality_controlled: 0
status: public
title: Computing all maps into a sphere
type: conference
year: '2012'
...
---
_id: '2441'
abstract:
- lang: eng
  text: 'Eigenvalues associated to graphs are a well-studied subject. In particular
    the spectra of the adjacency matrix and of the Laplacian of random graphs G(n,
    p) are known quite precisely. We consider generalizations of these matrices to
    simplicial complexes of higher dimensions and study their eigenvalues for the
    Linial-Meshulam model X k(n, p) of random k-dimensional simplicial complexes on
    n vertices. We show that for p = Ω(log n/n), the eigenvalues of both, the higher-dimensional
    adjacency matrix and the Laplacian, are a.a.s. sharply concentrated around two
    values. In a second part of the paper, we discuss a possible higherdimensional
    analogue of the Discrete Cheeger Inequality. This fundamental inequality expresses
    a close relationship between the eigenvalues of a graph and its combinatorial
    expansion properties; in particular, spectral expansion (a large eigenvalue gap)
    implies edge expansion. Recently, a higher-dimensional analogue of edge expansion
    for simplicial complexes was introduced by Gromov, and independently by Linial,
    Meshulam and Wallach and by Newman and Rabinovich. It is natural to ask whether
    there is a higher-dimensional version of Cheeger''s inequality. We show that the
    most straightforward version of a higher-dimensional Cheeger inequality fails:
    for every k &gt; 1, there is an infinite family of k-dimensional complexes that
    are spectrally expanding (there is a large eigenvalue gap for the Laplacian) but
    not combinatorially expanding.'
author:
- first_name: Anna
  full_name: Gundert, Anna
  last_name: Gundert
- first_name: Uli
  full_name: Uli Wagner
  id: 36690CA2-F248-11E8-B48F-1D18A9856A87
  last_name: Wagner
  orcid: 0000-0002-1494-0568
citation:
  ama: 'Gundert A, Wagner U. On Laplacians of random complexes. In: ACM; 2012:151-160.
    doi:<a href="https://doi.org/10.1145/2261250.2261272">10.1145/2261250.2261272</a>'
  apa: 'Gundert, A., &#38; Wagner, U. (2012). On Laplacians of random complexes (pp.
    151–160). Presented at the SGC: Symposuim on Computational Geometry, ACM. <a href="https://doi.org/10.1145/2261250.2261272">https://doi.org/10.1145/2261250.2261272</a>'
  chicago: Gundert, Anna, and Uli Wagner. “On Laplacians of Random Complexes,” 151–60.
    ACM, 2012. <a href="https://doi.org/10.1145/2261250.2261272">https://doi.org/10.1145/2261250.2261272</a>.
  ieee: 'A. Gundert and U. Wagner, “On Laplacians of random complexes,” presented
    at the SGC: Symposuim on Computational Geometry, 2012, pp. 151–160.'
  ista: 'Gundert A, Wagner U. 2012. On Laplacians of random complexes. SGC: Symposuim
    on Computational Geometry, 151–160.'
  mla: Gundert, Anna, and Uli Wagner. <i>On Laplacians of Random Complexes</i>. ACM,
    2012, pp. 151–60, doi:<a href="https://doi.org/10.1145/2261250.2261272">10.1145/2261250.2261272</a>.
  short: A. Gundert, U. Wagner, in:, ACM, 2012, pp. 151–160.
conference:
  name: 'SGC: Symposuim on Computational Geometry'
date_created: 2018-12-11T11:57:41Z
date_published: 2012-06-01T00:00:00Z
date_updated: 2021-01-12T06:57:30Z
day: '01'
doi: 10.1145/2261250.2261272
extern: 1
month: '06'
page: 151 - 160
publication_status: published
publisher: ACM
publist_id: '4464'
quality_controlled: 0
status: public
title: On Laplacians of random complexes
type: conference
year: '2012'
...
---
_id: '2453'
abstract:
- lang: eng
  text: Constitutive endocytic recycling is a crucial mechanism allowing regulation
    of the activity of proteins at the plasma membrane and for rapid changes in their
    localization, as demonstrated in plants for PIN-FORMED (PIN) proteins, the auxin
    transporters. To identify novel molecular components of endocytic recycling, mainly
    exocytosis, we designed a PIN1-green fluorescent protein fluorescence imaging-based
    forward genetic screen for Arabidopsis thaliana mutants that showed increased
    intracellular accumulation of cargos in response to the trafficking inhibitor
    brefeldin A (BFA). We identified bex5 (for BFA-visualized exocytic trafficking
    defective), a novel dominant mutant carrying a missense mutation that disrupts
    a conserved sequence motif of the small GTPase, RAS GENES FROM RAT BRAINA1b. bex5
    displays defects such as enhanced protein accumulation in abnormal BFA compartments,
    aberrant endosomes, and defective exocytosis and transcytosis. BEX5/RabA1b localizes
    to trans-Golgi network/early endosomes (TGN/EE) and acts on distinct trafficking
    processes like those regulated by GTP exchange factors on ADP-ribosylation factors
    GNOM-LIKE1 and HOPM INTERACTOR7/BFA-VISUALIZED ENDOCYTIC TRAFFICKING DEFECTIVE1,
    which regulate trafficking at the Golgi apparatus and TGN/EE, respectively. All
    together, this study identifies Arabidopsis BEX5/RabA1b as a novel regulator of
    protein trafficking from a TGN/EE compartment to the plasma membrane.
author:
- first_name: Elena
  full_name: Feraru, Elena
  last_name: Feraru
- first_name: Mugurel
  full_name: Feraru, Mugurel Ioan
  last_name: Feraru
- first_name: Rin
  full_name: Asaoka, Rin
  last_name: Asaoka
- first_name: Tomasz
  full_name: Paciorek, Tomasz
  last_name: Paciorek
- first_name: Riet
  full_name: De Rycke, Riet M
  last_name: De Rycke
- first_name: Hirokazu
  full_name: Tanaka, Hirokazu
  last_name: Tanaka
- first_name: Akihiko
  full_name: Nakano, Akihiko
  last_name: Nakano
- first_name: Jirí
  full_name: Jirí Friml
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: Feraru E, Feraru M, Asaoka R, et al. BEX5/RabA1b regulates trans-Golgi network-to-plasma
    membrane protein trafficking in Arabidopsis. <i>Plant Cell</i>. 2012;24(7):3074-3086.
    doi:<a href="https://doi.org/10.1105/tpc.112.098152">10.1105/tpc.112.098152</a>
  apa: Feraru, E., Feraru, M., Asaoka, R., Paciorek, T., De Rycke, R., Tanaka, H.,
    … Friml, J. (2012). BEX5/RabA1b regulates trans-Golgi network-to-plasma membrane
    protein trafficking in Arabidopsis. <i>Plant Cell</i>. American Society of Plant
    Biologists. <a href="https://doi.org/10.1105/tpc.112.098152">https://doi.org/10.1105/tpc.112.098152</a>
  chicago: Feraru, Elena, Mugurel Feraru, Rin Asaoka, Tomasz Paciorek, Riet De Rycke,
    Hirokazu Tanaka, Akihiko Nakano, and Jiří Friml. “BEX5/RabA1b Regulates Trans-Golgi
    Network-to-Plasma Membrane Protein Trafficking in Arabidopsis.” <i>Plant Cell</i>.
    American Society of Plant Biologists, 2012. <a href="https://doi.org/10.1105/tpc.112.098152">https://doi.org/10.1105/tpc.112.098152</a>.
  ieee: E. Feraru <i>et al.</i>, “BEX5/RabA1b regulates trans-Golgi network-to-plasma
    membrane protein trafficking in Arabidopsis,” <i>Plant Cell</i>, vol. 24, no.
    7. American Society of Plant Biologists, pp. 3074–3086, 2012.
  ista: Feraru E, Feraru M, Asaoka R, Paciorek T, De Rycke R, Tanaka H, Nakano A,
    Friml J. 2012. BEX5/RabA1b regulates trans-Golgi network-to-plasma membrane protein
    trafficking in Arabidopsis. Plant Cell. 24(7), 3074–3086.
  mla: Feraru, Elena, et al. “BEX5/RabA1b Regulates Trans-Golgi Network-to-Plasma
    Membrane Protein Trafficking in Arabidopsis.” <i>Plant Cell</i>, vol. 24, no.
    7, American Society of Plant Biologists, 2012, pp. 3074–86, doi:<a href="https://doi.org/10.1105/tpc.112.098152">10.1105/tpc.112.098152</a>.
  short: E. Feraru, M. Feraru, R. Asaoka, T. Paciorek, R. De Rycke, H. Tanaka, A.
    Nakano, J. Friml, Plant Cell 24 (2012) 3074–3086.
date_created: 2018-12-11T11:57:45Z
date_published: 2012-07-01T00:00:00Z
date_updated: 2021-01-12T06:57:35Z
day: '01'
doi: 10.1105/tpc.112.098152
extern: 1
intvolume: '        24'
issue: '7'
month: '07'
page: 3074 - 3086
publication: Plant Cell
publication_status: published
publisher: American Society of Plant Biologists
publist_id: '4450'
quality_controlled: 0
status: public
title: BEX5/RabA1b regulates trans-Golgi network-to-plasma membrane protein trafficking
  in Arabidopsis
type: journal_article
volume: 24
year: '2012'
...
---
_id: '2456'
abstract:
- lang: eng
  text: The third EMBO Conference on Plant Molecular Biology, which focused on ‘Plant
    development and environmental interactions’,was held in May 2012 in Matera, Italy.
    Here, we review some of the topics and themes that emerged from the   various
    contributions; namely, steering technologies, transcriptional networks and hormonal
    regulation, small RNAs, cell and tissue polarity, environmental control and natural
    variation. We intend to provide the reader who might have missed this remarkable
    event with a glimpse of the recent progress made in this blossoming research field.
author:
- first_name: Tom
  full_name: Beeckman, Tom
  last_name: Beeckman
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: Beeckman T, Friml J. Plant developmental biologists meet on stairways in Matera.
    <i>Development</i>. 2012;139(20):3677-3682. doi:<a href="https://doi.org/10.1242/dev.080861">10.1242/dev.080861</a>
  apa: Beeckman, T., &#38; Friml, J. (2012). Plant developmental biologists meet on
    stairways in Matera. <i>Development</i>. Company of Biologists. <a href="https://doi.org/10.1242/dev.080861">https://doi.org/10.1242/dev.080861</a>
  chicago: Beeckman, Tom, and Jiří Friml. “Plant Developmental Biologists Meet on
    Stairways in Matera.” <i>Development</i>. Company of Biologists, 2012. <a href="https://doi.org/10.1242/dev.080861">https://doi.org/10.1242/dev.080861</a>.
  ieee: T. Beeckman and J. Friml, “Plant developmental biologists meet on stairways
    in Matera,” <i>Development</i>, vol. 139, no. 20. Company of Biologists, pp. 3677–3682,
    2012.
  ista: Beeckman T, Friml J. 2012. Plant developmental biologists meet on stairways
    in Matera. Development. 139(20), 3677–3682.
  mla: Beeckman, Tom, and Jiří Friml. “Plant Developmental Biologists Meet on Stairways
    in Matera.” <i>Development</i>, vol. 139, no. 20, Company of Biologists, 2012,
    pp. 3677–82, doi:<a href="https://doi.org/10.1242/dev.080861">10.1242/dev.080861</a>.
  short: T. Beeckman, J. Friml, Development 139 (2012) 3677–3682.
date_created: 2018-12-11T11:57:46Z
date_published: 2012-10-15T00:00:00Z
date_updated: 2021-01-12T06:57:35Z
day: '15'
doi: 10.1242/dev.080861
extern: '1'
intvolume: '       139'
issue: '20'
language:
- iso: eng
month: '10'
oa_version: None
page: 3677 - 3682
publication: Development
publication_status: published
publisher: Company of Biologists
publist_id: '4447'
quality_controlled: '1'
status: public
title: Plant developmental biologists meet on stairways in Matera
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 139
year: '2012'
...
---
_id: '2458'
abstract:
- lang: eng
  text: Initiation and successive development of organs induce mechanical stresses
    at the cellular level. Using the tomato shoot apex, a new study now proposes that
    mechanical strain regulates the plasma membrane abundance of the PIN1 auxin transporter,
    thereby reinforcing a positive feed-back loop between growth and auxin accumulation.
author:
- first_name: Hongjiang
  full_name: Li, Hongjiang
  id: 33CA54A6-F248-11E8-B48F-1D18A9856A87
  last_name: Li
  orcid: 0000-0001-5039-9660
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Wim
  full_name: Grunewald, Wim
  last_name: Grunewald
citation:
  ama: 'Li H, Friml J, Grunewald W. Cell polarity: Stretching prevents developmental
    cramps. <i>Current Biology</i>. 2012;22(16):R635-R637. doi:<a href="https://doi.org/10.1016/j.cub.2012.06.053">10.1016/j.cub.2012.06.053</a>'
  apa: 'Li, H., Friml, J., &#38; Grunewald, W. (2012). Cell polarity: Stretching prevents
    developmental cramps. <i>Current Biology</i>. Cell Press. <a href="https://doi.org/10.1016/j.cub.2012.06.053">https://doi.org/10.1016/j.cub.2012.06.053</a>'
  chicago: 'Li, Hongjiang, Jiří Friml, and Wim Grunewald. “Cell Polarity: Stretching
    Prevents Developmental Cramps.” <i>Current Biology</i>. Cell Press, 2012. <a href="https://doi.org/10.1016/j.cub.2012.06.053">https://doi.org/10.1016/j.cub.2012.06.053</a>.'
  ieee: 'H. Li, J. Friml, and W. Grunewald, “Cell polarity: Stretching prevents developmental
    cramps,” <i>Current Biology</i>, vol. 22, no. 16. Cell Press, pp. R635–R637, 2012.'
  ista: 'Li H, Friml J, Grunewald W. 2012. Cell polarity: Stretching prevents developmental
    cramps. Current Biology. 22(16), R635–R637.'
  mla: 'Li, Hongjiang, et al. “Cell Polarity: Stretching Prevents Developmental Cramps.”
    <i>Current Biology</i>, vol. 22, no. 16, Cell Press, 2012, pp. R635–37, doi:<a
    href="https://doi.org/10.1016/j.cub.2012.06.053">10.1016/j.cub.2012.06.053</a>.'
  short: H. Li, J. Friml, W. Grunewald, Current Biology 22 (2012) R635–R637.
date_created: 2018-12-11T11:57:47Z
date_published: 2012-08-21T00:00:00Z
date_updated: 2021-01-12T06:57:36Z
day: '21'
doi: 10.1016/j.cub.2012.06.053
extern: '1'
intvolume: '        22'
issue: '16'
language:
- iso: eng
month: '08'
oa_version: None
page: R635 - R637
publication: Current Biology
publication_status: published
publisher: Cell Press
publist_id: '4445'
quality_controlled: '1'
status: public
title: 'Cell polarity: Stretching prevents developmental cramps'
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 22
year: '2012'
...
---
_id: '2459'
abstract:
- lang: eng
  text: Coordinated, subcellular trafficking of proteins is one of the fundamental
    properties of the multicellular eukaryotic organisms. Trafficking involves a large
    diversity of compartments, pathways, cargo molecules, and vesicle-sorting events.
    It is also crucial in regulating the localization and, thus, the activity of various
    proteins, but the process is still poorly genetically defined in plants. In the
    past, forward genetics screens had been used to determine the function of genes
    by searching for a specific morphological phenotype in the organism population
    in which mutations had been induced chemically or by irradiation. Unfortunately,
    these straightforward genetic screens turned out to be limited in identifying
    new regulators of intracellular protein transport, because mutations affecting
    essential trafficking pathways often lead to lethality. In addition, the use of
    these approaches has been restricted by functional redundancy among trafficking
    regulators. Screens for mutants that rely on the observation of changes in the
    cellular localization or dynamics of fluorescent subcellular markers enable, at
    least partially, to circumvent these issues. Hence, such image-based screens provide
    the possibility to identify either alleles with weak effects or components of
    the subcellular trafficking machinery that have no strong impact on the plant
    growth.
article_number: '97'
author:
- first_name: Marta
  full_name: Zwiewka, Marta
  last_name: Zwiewka
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: Zwiewka M, Friml J. Fluorescence imaging-based forward genetic screens to identify
    trafficking regulators in plants. <i>Frontiers in Plant Science</i>. 2012;3(May).
    doi:<a href="https://doi.org/10.3389/fpls.2012.00097">10.3389/fpls.2012.00097</a>
  apa: Zwiewka, M., &#38; Friml, J. (2012). Fluorescence imaging-based forward genetic
    screens to identify trafficking regulators in plants. <i>Frontiers in Plant Science</i>.
    Frontiers Research Foundation. <a href="https://doi.org/10.3389/fpls.2012.00097">https://doi.org/10.3389/fpls.2012.00097</a>
  chicago: Zwiewka, Marta, and Jiří Friml. “Fluorescence Imaging-Based Forward Genetic
    Screens to Identify Trafficking Regulators in Plants.” <i>Frontiers in Plant Science</i>.
    Frontiers Research Foundation, 2012. <a href="https://doi.org/10.3389/fpls.2012.00097">https://doi.org/10.3389/fpls.2012.00097</a>.
  ieee: M. Zwiewka and J. Friml, “Fluorescence imaging-based forward genetic screens
    to identify trafficking regulators in plants,” <i>Frontiers in Plant Science</i>,
    vol. 3, no. May. Frontiers Research Foundation, 2012.
  ista: Zwiewka M, Friml J. 2012. Fluorescence imaging-based forward genetic screens
    to identify trafficking regulators in plants. Frontiers in Plant Science. 3(May),
    97.
  mla: Zwiewka, Marta, and Jiří Friml. “Fluorescence Imaging-Based Forward Genetic
    Screens to Identify Trafficking Regulators in Plants.” <i>Frontiers in Plant Science</i>,
    vol. 3, no. May, 97, Frontiers Research Foundation, 2012, doi:<a href="https://doi.org/10.3389/fpls.2012.00097">10.3389/fpls.2012.00097</a>.
  short: M. Zwiewka, J. Friml, Frontiers in Plant Science 3 (2012).
date_created: 2018-12-11T11:57:47Z
date_published: 2012-05-24T00:00:00Z
date_updated: 2021-01-12T06:57:36Z
day: '24'
ddc:
- '580'
doi: 10.3389/fpls.2012.00097
extern: '1'
file:
- access_level: open_access
  checksum: ab4e9487ccdb83a7a0a9ee6811521844
  content_type: application/pdf
  creator: kschuh
  date_created: 2019-04-26T06:49:26Z
  date_updated: 2020-07-14T12:45:41Z
  file_id: '6346'
  file_name: 2012_frontiers_Zwiewka.pdf
  file_size: 1468230
  relation: main_file
file_date_updated: 2020-07-14T12:45:41Z
has_accepted_license: '1'
intvolume: '         3'
issue: May
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc/4.0/
month: '05'
oa: 1
oa_version: Published Version
publication: Frontiers in Plant Science
publication_status: published
publisher: Frontiers Research Foundation
publist_id: '4444'
quality_controlled: '1'
status: public
title: Fluorescence imaging-based forward genetic screens to identify trafficking
  regulators in plants
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
  short: CC BY-NC (4.0)
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 3
year: '2012'
...
---
_id: '2474'
abstract:
- lang: eng
  text: 'Interneurons are critical for neuronal circuit function, but how their dendritic
    morphologies and membrane properties influence information flow within neuronal
    circuits is largely unknown. We studied the spatiotemporal profile of synaptic
    integration and short-term plasticity in dendrites of mature cerebellar stellate
    cells by combining two-photon guided electrical stimulation, glutamate uncaging,
    electron microscopy, and modeling. Synaptic activation within thin (0.4 μm) dendrites
    produced somatic responses that became smaller and slower with increasing distance
    from the soma, sublinear subthreshold input-output relationships, and a somatodendritic
    gradient of short-term plasticity. Unlike most studies showing that neurons employ
    active dendritic mechanisms, we found that passive cable properties of thin dendrites
    determine the sublinear integration and plasticity gradient, which both result
    from large dendritic depolarizations that reduce synaptic driving force. These
    integrative properties allow stellate cells to act as spatiotemporal filters of
    synaptic input patterns, thereby biasing their output in favor of sparse presynaptic
    activity. Stellate cells are critical sources of inhibition in the cerebellum,
    but how their dendrites integrate excitatory synaptic inputs is unknown. Abrahamsson
    et al. show that thin dendrites and passive membrane properties of SCs promote
    sublinear synaptic summation and distance-dependent short-term plasticity. '
author:
- first_name: Therese
  full_name: Abrahamsson, Therese
  last_name: Abrahamsson
- first_name: Laurence
  full_name: Cathala, Laurence
  last_name: Cathala
- first_name: Ko
  full_name: Matsui, Ko
  last_name: Matsui
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: David
  full_name: DiGregorio, David A
  last_name: Digregorio
citation:
  ama: Abrahamsson T, Cathala L, Matsui K, Shigemoto R, Digregorio D. Thin dendrites
    of cerebellar interneurons confer sublinear synaptic integration and a gradient
    of short-term plasticity. <i>Neuron</i>. 2012;73(6):1159-1172. doi:<a href="https://doi.org/10.1016/j.neuron.2012.01.027">10.1016/j.neuron.2012.01.027</a>
  apa: Abrahamsson, T., Cathala, L., Matsui, K., Shigemoto, R., &#38; Digregorio,
    D. (2012). Thin dendrites of cerebellar interneurons confer sublinear synaptic
    integration and a gradient of short-term plasticity. <i>Neuron</i>. Elsevier.
    <a href="https://doi.org/10.1016/j.neuron.2012.01.027">https://doi.org/10.1016/j.neuron.2012.01.027</a>
  chicago: Abrahamsson, Therese, Laurence Cathala, Ko Matsui, Ryuichi Shigemoto, and
    David Digregorio. “Thin Dendrites of Cerebellar Interneurons Confer Sublinear
    Synaptic Integration and a Gradient of Short-Term Plasticity.” <i>Neuron</i>.
    Elsevier, 2012. <a href="https://doi.org/10.1016/j.neuron.2012.01.027">https://doi.org/10.1016/j.neuron.2012.01.027</a>.
  ieee: T. Abrahamsson, L. Cathala, K. Matsui, R. Shigemoto, and D. Digregorio, “Thin
    dendrites of cerebellar interneurons confer sublinear synaptic integration and
    a gradient of short-term plasticity,” <i>Neuron</i>, vol. 73, no. 6. Elsevier,
    pp. 1159–1172, 2012.
  ista: Abrahamsson T, Cathala L, Matsui K, Shigemoto R, Digregorio D. 2012. Thin
    dendrites of cerebellar interneurons confer sublinear synaptic integration and
    a gradient of short-term plasticity. Neuron. 73(6), 1159–1172.
  mla: Abrahamsson, Therese, et al. “Thin Dendrites of Cerebellar Interneurons Confer
    Sublinear Synaptic Integration and a Gradient of Short-Term Plasticity.” <i>Neuron</i>,
    vol. 73, no. 6, Elsevier, 2012, pp. 1159–72, doi:<a href="https://doi.org/10.1016/j.neuron.2012.01.027">10.1016/j.neuron.2012.01.027</a>.
  short: T. Abrahamsson, L. Cathala, K. Matsui, R. Shigemoto, D. Digregorio, Neuron
    73 (2012) 1159–1172.
date_created: 2018-12-11T11:57:52Z
date_published: 2012-03-22T00:00:00Z
date_updated: 2021-01-12T06:57:42Z
day: '22'
doi: 10.1016/j.neuron.2012.01.027
extern: 1
intvolume: '        73'
issue: '6'
month: '03'
page: 1159 - 1172
publication: Neuron
publication_status: published
publisher: Elsevier
publist_id: '4427'
quality_controlled: 0
status: public
title: Thin dendrites of cerebellar interneurons confer sublinear synaptic integration
  and a gradient of short-term plasticity
type: journal_article
volume: 73
year: '2012'
...
---
_id: '2475'
abstract:
- lang: eng
  text: 'Background: One of the best-characterized causative factors of Alzheimer''s
    disease (AD) is the generation of amyloid-β peptide (Aβ). AD subjects are at high
    risk of epileptic seizures accompanied by aberrant neuronal excitability, which
    in itself enhances Aβ generation. However, the molecular linkage between epileptic
    seizures and Aβ generation in AD remains unclear. Results: X11 and X11-like (X11L)
    gene knockout mice suffered from epileptic seizures, along with a malfunction
    of hyperpolarization-activated cyclic nucleotide gated (HCN) channels. Genetic
    ablation of HCN1 in mice and HCN1 channel blockage in cultured Neuro2a (N2a) cells
    enhanced Aβ generation. Interestingly, HCN1 levels dramatically decreased in the
    temporal lobe of cynomolgus monkeys (Macaca fascicularis) during aging and were
    significantly diminished in the temporal lobe of sporadic AD patients. Conclusion:
    Because HCN1 associates with amyloid-β precursor protein (APP) and X11/X11L in
    the brain, genetic deficiency of X11/X11L may induce aberrant HCN1 distribution
    along with epilepsy. Moreover, the reduction in HCN1 levels in aged primates may
    contribute to augmented Aβ generation. Taken together, HCN1 is proposed to play
    an important role in the molecular linkage between epileptic seizures and Aβ generation,
    and in the aggravation of sporadic AD.'
author:
- first_name: Yuhki
  full_name: Saito, Yuhki
  last_name: Saito
- first_name: Tsuyoshi
  full_name: Inoue, Tsuyoshi
  last_name: Inoue
- first_name: Gang
  full_name: Zhu, Gang
  last_name: Zhu
- first_name: Naoki
  full_name: Kimura, Naoki
  last_name: Kimura
- first_name: Motohiro
  full_name: Okada, Motohiro
  last_name: Okada
- first_name: Masaki
  full_name: Nishimura, Masaki
  last_name: Nishimura
- first_name: Shigeo
  full_name: Murayama, Shigeo
  last_name: Murayama
- first_name: Sunao
  full_name: Kaneko, Sunao
  last_name: Kaneko
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Keiji
  full_name: Imoto, Keiji
  last_name: Imoto
- first_name: Toshiharu
  full_name: Suzuki, Toshiharu
  last_name: Suzuki
citation:
  ama: 'Saito Y, Inoue T, Zhu G, et al. Hyperpolarization-activated cyclic nucleotide
    gated channels: A potential molecular link between epileptic seizures and Aβ generation
    in Alzheimer’s disease. <i>Molecular Neurodegeneration</i>. 2012;7(1). doi:<a
    href="https://doi.org/10.1186/1750-1326-7-50">10.1186/1750-1326-7-50</a>'
  apa: 'Saito, Y., Inoue, T., Zhu, G., Kimura, N., Okada, M., Nishimura, M., … Suzuki,
    T. (2012). Hyperpolarization-activated cyclic nucleotide gated channels: A potential
    molecular link between epileptic seizures and Aβ generation in Alzheimer’s disease.
    <i>Molecular Neurodegeneration</i>. BioMed Central. <a href="https://doi.org/10.1186/1750-1326-7-50">https://doi.org/10.1186/1750-1326-7-50</a>'
  chicago: 'Saito, Yuhki, Tsuyoshi Inoue, Gang Zhu, Naoki Kimura, Motohiro Okada,
    Masaki Nishimura, Shigeo Murayama, et al. “Hyperpolarization-Activated Cyclic
    Nucleotide Gated Channels: A Potential Molecular Link between Epileptic Seizures
    and Aβ Generation in Alzheimer’s Disease.” <i>Molecular Neurodegeneration</i>.
    BioMed Central, 2012. <a href="https://doi.org/10.1186/1750-1326-7-50">https://doi.org/10.1186/1750-1326-7-50</a>.'
  ieee: 'Y. Saito <i>et al.</i>, “Hyperpolarization-activated cyclic nucleotide gated
    channels: A potential molecular link between epileptic seizures and Aβ generation
    in Alzheimer’s disease,” <i>Molecular Neurodegeneration</i>, vol. 7, no. 1. BioMed
    Central, 2012.'
  ista: 'Saito Y, Inoue T, Zhu G, Kimura N, Okada M, Nishimura M, Murayama S, Kaneko
    S, Shigemoto R, Imoto K, Suzuki T. 2012. Hyperpolarization-activated cyclic nucleotide
    gated channels: A potential molecular link between epileptic seizures and Aβ generation
    in Alzheimer’s disease. Molecular Neurodegeneration. 7(1).'
  mla: 'Saito, Yuhki, et al. “Hyperpolarization-Activated Cyclic Nucleotide Gated
    Channels: A Potential Molecular Link between Epileptic Seizures and Aβ Generation
    in Alzheimer’s Disease.” <i>Molecular Neurodegeneration</i>, vol. 7, no. 1, BioMed
    Central, 2012, doi:<a href="https://doi.org/10.1186/1750-1326-7-50">10.1186/1750-1326-7-50</a>.'
  short: Y. Saito, T. Inoue, G. Zhu, N. Kimura, M. Okada, M. Nishimura, S. Murayama,
    S. Kaneko, R. Shigemoto, K. Imoto, T. Suzuki, Molecular Neurodegeneration 7 (2012).
date_created: 2018-12-11T11:57:53Z
date_published: 2012-10-03T00:00:00Z
date_updated: 2021-01-12T06:57:42Z
day: '03'
doi: 10.1186/1750-1326-7-50
extern: 1
intvolume: '         7'
issue: '1'
month: '10'
publication: Molecular Neurodegeneration
publication_status: published
publisher: BioMed Central
publist_id: '4426'
quality_controlled: 0
status: public
title: 'Hyperpolarization-activated cyclic nucleotide gated channels: A potential
  molecular link between epileptic seizures and Aβ generation in Alzheimer''s disease'
type: journal_article
volume: 7
year: '2012'
...
---
_id: '2476'
abstract:
- lang: eng
  text: Recently developed pharmacogenetic and optogenetic approaches, with their
    own advantages and disadvantages, have become indispensable tools in modern neuroscience.
    Here, we employed a previously described knock-in mouse line (GABA ARγ2 77Ilox)
    in which the γ2 subunit of the GABA A receptor (GABA AR) was mutated to become
    zolpidem insensitive (γ2 77I) and used viral vectors to swap γ2 77I with wild-type,
    zolpidem-sensitive γ2 subunits (γ2 77F). The verification of unaltered density
    and subcellular distribution of the virally introduced γ2 subunits requires their
    selective labelling. For this we generated six N- and six C-terminal-tagged γ2
    subunits, with which cortical cultures of GABA ARγ2 -/- mice were transduced using
    lentiviruses. We found that the N-terminal AU1 tag resulted in excellent immunodetection
    and unimpaired synaptic localization. Unaltered kinetic properties of the AU1-tagged
    γ2 ( AU1γ2 77F) channels were demonstrated with whole-cell patch-clamp recordings
    of spontaneous IPSCs from cultured cells. Next, we carried out stereotaxic injections
    of lenti- and adeno-associated viruses containing Cre-recombinase and the AU1γ2
    77F subunit (Cre-2A- AU1γ2 77F) into the neocortex of GABA ARγ2 77Ilox mice. Light
    microscopic immunofluorescence and electron microscopic freeze-fracture replica
    immunogold labelling demonstrated the efficient immunodetection of the AU1 tag
    and the normal enrichment of the AU1γ2 77F subunits in perisomatic GABAergic synapses.
    In line with this, miniature and action potential-evoked IPSCs whole-cell recorded
    from transduced cells had unaltered amplitudes, kinetics and restored zolpidem
    sensitivity. Our results obtained with a wide range of structural and functional
    verification methods reveal unaltered subcellular distributions and functional
    properties of γ2 77I and AU1γ2 77F GABA ARs in cortical pyramidal cells. This
    transgenic-viral pharmacogenetic approach has the advantage that it does not require
    any extrinsic protein that might endow some unforeseen alterations of the genetically
    modified cells. In addition, this virus-based approach opens up the possibility
    of modifying multiple cell types in distinct brain regions and performing alternative
    recombination-based intersectional genetic manipulations.
author:
- first_name: Máté
  full_name: Sümegi, Máté
  last_name: Sümegi
- first_name: Yugo
  full_name: Fukazawa, Yugo
  last_name: Fukazawa
- first_name: Ko
  full_name: Matsui, Ko
  last_name: Matsui
- first_name: Andrea
  full_name: Lörincz, Andrea
  last_name: Lörincz
- first_name: Mark
  full_name: Eyre, Mark D
  last_name: Eyre
- first_name: Zoltán
  full_name: Nusser, Zoltán
  last_name: Nusser
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
citation:
  ama: Sümegi M, Fukazawa Y, Matsui K, et al. Virus-mediated swapping of zolpidem-insensitive
    with zolpidem-sensitive GABA A receptors in cortical pyramidal cells. <i>Journal
    of Physiology</i>. 2012;590(7):1517-1534. doi:<a href="https://doi.org/10.1113/jphysiol.2012.227538">10.1113/jphysiol.2012.227538</a>
  apa: Sümegi, M., Fukazawa, Y., Matsui, K., Lörincz, A., Eyre, M., Nusser, Z., &#38;
    Shigemoto, R. (2012). Virus-mediated swapping of zolpidem-insensitive with zolpidem-sensitive
    GABA A receptors in cortical pyramidal cells. <i>Journal of Physiology</i>. Wiley-Blackwell.
    <a href="https://doi.org/10.1113/jphysiol.2012.227538">https://doi.org/10.1113/jphysiol.2012.227538</a>
  chicago: Sümegi, Máté, Yugo Fukazawa, Ko Matsui, Andrea Lörincz, Mark Eyre, Zoltán
    Nusser, and Ryuichi Shigemoto. “Virus-Mediated Swapping of Zolpidem-Insensitive
    with Zolpidem-Sensitive GABA A Receptors in Cortical Pyramidal Cells.” <i>Journal
    of Physiology</i>. Wiley-Blackwell, 2012. <a href="https://doi.org/10.1113/jphysiol.2012.227538">https://doi.org/10.1113/jphysiol.2012.227538</a>.
  ieee: M. Sümegi <i>et al.</i>, “Virus-mediated swapping of zolpidem-insensitive
    with zolpidem-sensitive GABA A receptors in cortical pyramidal cells,” <i>Journal
    of Physiology</i>, vol. 590, no. 7. Wiley-Blackwell, pp. 1517–1534, 2012.
  ista: Sümegi M, Fukazawa Y, Matsui K, Lörincz A, Eyre M, Nusser Z, Shigemoto R.
    2012. Virus-mediated swapping of zolpidem-insensitive with zolpidem-sensitive
    GABA A receptors in cortical pyramidal cells. Journal of Physiology. 590(7), 1517–1534.
  mla: Sümegi, Máté, et al. “Virus-Mediated Swapping of Zolpidem-Insensitive with
    Zolpidem-Sensitive GABA A Receptors in Cortical Pyramidal Cells.” <i>Journal of
    Physiology</i>, vol. 590, no. 7, Wiley-Blackwell, 2012, pp. 1517–34, doi:<a href="https://doi.org/10.1113/jphysiol.2012.227538">10.1113/jphysiol.2012.227538</a>.
  short: M. Sümegi, Y. Fukazawa, K. Matsui, A. Lörincz, M. Eyre, Z. Nusser, R. Shigemoto,
    Journal of Physiology 590 (2012) 1517–1534.
date_created: 2018-12-11T11:57:53Z
date_published: 2012-04-07T00:00:00Z
date_updated: 2021-01-12T06:57:43Z
day: '07'
doi: 10.1113/jphysiol.2012.227538
extern: 1
intvolume: '       590'
issue: '7'
month: '04'
page: 1517 - 1534
publication: Journal of Physiology
publication_status: published
publisher: Wiley-Blackwell
publist_id: '4425'
quality_controlled: 0
status: public
title: Virus-mediated swapping of zolpidem-insensitive with zolpidem-sensitive GABA
  A receptors in cortical pyramidal cells
type: journal_article
volume: 590
year: '2012'
...
---
_id: '2477'
abstract:
- lang: eng
  text: Dynamic activity of glia has repeatedly been demonstrated, but if such activity
    is independent from neuronal activity, glia would not have any role in the information
    processing in the brain or in the generation of animal behavior. Evidence for
    neurons communicating with glia is solid, but the signaling pathway leading back
    from glial-to-neuronal activity was often difficult to study. Here, we introduced
    a transgenic mouse line in which channelrhodopsin-2, a light-gated cation channel,
    was expressed in astrocytes. Selective photostimulation of these astrocytes in
    vivo triggered neuronal activation. Using slice preparations, we show that glial
    photostimulation leads to release of glutamate, which was sufficient to activate
    AMPA receptors on Purkinje cells and to induce long-term depression of parallel
    fiber-to-Purkinje cell synapses through activation of metabotropic glutamate receptors.
    In contrast to neuronal synaptic vesicular release, glial activation likely causes
    preferential activation of extrasynaptic receptors that appose glial membrane.
    Finally, we show that neuronal activation by glial stimulation can lead to perturbation
    of cerebellar modulated motor behavior. These findings demonstrate that glia can
    modulate the tone of neuronal activity and behavior. This animal model is expected
    to be a potentially powerful approach to study the role of glia in brain function.
author:
- first_name: Takuya
  full_name: Sasaki, Takuya
  last_name: Sasaki
- first_name: Kaoru
  full_name: Beppu, Kaoru
  last_name: Beppu
- first_name: Kenji
  full_name: Tanaka, Kenji F
  last_name: Tanaka
- first_name: Yugo
  full_name: Fukazawa, Yugo
  last_name: Fukazawa
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Ko
  full_name: Matsui, Ko
  last_name: Matsui
citation:
  ama: Sasaki T, Beppu K, Tanaka K, Fukazawa Y, Shigemoto R, Matsui K. Application
    of an optogenetic byway for perturbing neuronal activity via glial photostimulation.
    <i>PNAS</i>. 2012;109(50):20720-20725. doi:<a href="https://doi.org/10.1073/pnas.1213458109">10.1073/pnas.1213458109</a>
  apa: Sasaki, T., Beppu, K., Tanaka, K., Fukazawa, Y., Shigemoto, R., &#38; Matsui,
    K. (2012). Application of an optogenetic byway for perturbing neuronal activity
    via glial photostimulation. <i>PNAS</i>. National Academy of Sciences. <a href="https://doi.org/10.1073/pnas.1213458109">https://doi.org/10.1073/pnas.1213458109</a>
  chicago: Sasaki, Takuya, Kaoru Beppu, Kenji Tanaka, Yugo Fukazawa, Ryuichi Shigemoto,
    and Ko Matsui. “Application of an Optogenetic Byway for Perturbing Neuronal Activity
    via Glial Photostimulation.” <i>PNAS</i>. National Academy of Sciences, 2012.
    <a href="https://doi.org/10.1073/pnas.1213458109">https://doi.org/10.1073/pnas.1213458109</a>.
  ieee: T. Sasaki, K. Beppu, K. Tanaka, Y. Fukazawa, R. Shigemoto, and K. Matsui,
    “Application of an optogenetic byway for perturbing neuronal activity via glial
    photostimulation,” <i>PNAS</i>, vol. 109, no. 50. National Academy of Sciences,
    pp. 20720–20725, 2012.
  ista: Sasaki T, Beppu K, Tanaka K, Fukazawa Y, Shigemoto R, Matsui K. 2012. Application
    of an optogenetic byway for perturbing neuronal activity via glial photostimulation.
    PNAS. 109(50), 20720–20725.
  mla: Sasaki, Takuya, et al. “Application of an Optogenetic Byway for Perturbing
    Neuronal Activity via Glial Photostimulation.” <i>PNAS</i>, vol. 109, no. 50,
    National Academy of Sciences, 2012, pp. 20720–25, doi:<a href="https://doi.org/10.1073/pnas.1213458109">10.1073/pnas.1213458109</a>.
  short: T. Sasaki, K. Beppu, K. Tanaka, Y. Fukazawa, R. Shigemoto, K. Matsui, PNAS
    109 (2012) 20720–20725.
date_created: 2018-12-11T11:57:54Z
date_published: 2012-12-11T00:00:00Z
date_updated: 2021-01-12T06:57:43Z
day: '11'
doi: 10.1073/pnas.1213458109
extern: 1
intvolume: '       109'
issue: '50'
month: '12'
page: 20720 - 20725
publication: PNAS
publication_status: published
publisher: National Academy of Sciences
publist_id: '4424'
quality_controlled: 0
status: public
title: Application of an optogenetic byway for perturbing neuronal activity via glial
  photostimulation
type: journal_article
volume: 109
year: '2012'
...
---
_id: '2514'
abstract:
- lang: eng
  text: Visual information must be relayed through the lateral geniculate nucleus
    before it reaches the visual cortex. However, not all spikes created in the retina
    lead to postsynaptic spikes and properties of the retinogeniculate synapse contribute
    to this filtering. To understand the mechanisms underlying this filtering process,
    we conducted electrophysiology to assess the properties of signal transmission
    in the Long-Evans rat. We also performed SDS-digested freeze-fracture replica
    labeling to quantify the receptor and transporter distribution, as well as EM
    reconstruction to describe the 3D structure. To analyze the impact of transmitter
    diffusion on the activity of the receptors, simulations were integrated. We identified
    that a large contributor to the filtering is the marked paired-pulse depression
    at this synapse, which was intensified by the morphological characteristics of
    the contacts. The broad presynaptic and postsynaptic contact area restricts transmitter
    diffusion two dimensionally. Additionally, the presence of multiple closely arranged
    release sites invites intersynaptic spillover, which causes desensitization of
    AMPA receptors. The presence of AMPA receptors that slowly recover from desensitization
    along with the high presynaptic release probability and multivesicular release
    at each synapse also contribute to the depression. These features contrast with
    many other synapses where spatiotemporal spread of transmitter is limited by rapid
    transmitter clearance allowing synapses to operate more independently. We propose
    that the micrometer-order structure can ultimately affect the visual information
    processing.
author:
- first_name: Timotheus
  full_name: Budisantoso, Timotheus
  last_name: Budisantoso
- first_name: Ko
  full_name: Matsui, Ko
  last_name: Matsui
- first_name: Naomi
  full_name: Kamasawa, Naomi
  last_name: Kamasawa
- first_name: Yugo
  full_name: Fukazawa, Yugo
  last_name: Fukazawa
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
citation:
  ama: Budisantoso T, Matsui K, Kamasawa N, Fukazawa Y, Shigemoto R. Mechanisms underlying
    signal filtering at a multisynapse contact. <i>Journal of Neuroscience</i>. 2012;32(7):2357-2376.
    doi:<a href="https://doi.org/10.1523/JNEUROSCI.5243-11.2012">10.1523/JNEUROSCI.5243-11.2012</a>
  apa: Budisantoso, T., Matsui, K., Kamasawa, N., Fukazawa, Y., &#38; Shigemoto, R.
    (2012). Mechanisms underlying signal filtering at a multisynapse contact. <i>Journal
    of Neuroscience</i>. Society for Neuroscience. <a href="https://doi.org/10.1523/JNEUROSCI.5243-11.2012">https://doi.org/10.1523/JNEUROSCI.5243-11.2012</a>
  chicago: Budisantoso, Timotheus, Ko Matsui, Naomi Kamasawa, Yugo Fukazawa, and Ryuichi
    Shigemoto. “Mechanisms Underlying Signal Filtering at a Multisynapse Contact.”
    <i>Journal of Neuroscience</i>. Society for Neuroscience, 2012. <a href="https://doi.org/10.1523/JNEUROSCI.5243-11.2012">https://doi.org/10.1523/JNEUROSCI.5243-11.2012</a>.
  ieee: T. Budisantoso, K. Matsui, N. Kamasawa, Y. Fukazawa, and R. Shigemoto, “Mechanisms
    underlying signal filtering at a multisynapse contact,” <i>Journal of Neuroscience</i>,
    vol. 32, no. 7. Society for Neuroscience, pp. 2357–2376, 2012.
  ista: Budisantoso T, Matsui K, Kamasawa N, Fukazawa Y, Shigemoto R. 2012. Mechanisms
    underlying signal filtering at a multisynapse contact. Journal of Neuroscience.
    32(7), 2357–2376.
  mla: Budisantoso, Timotheus, et al. “Mechanisms Underlying Signal Filtering at a
    Multisynapse Contact.” <i>Journal of Neuroscience</i>, vol. 32, no. 7, Society
    for Neuroscience, 2012, pp. 2357–76, doi:<a href="https://doi.org/10.1523/JNEUROSCI.5243-11.2012">10.1523/JNEUROSCI.5243-11.2012</a>.
  short: T. Budisantoso, K. Matsui, N. Kamasawa, Y. Fukazawa, R. Shigemoto, Journal
    of Neuroscience 32 (2012) 2357–2376.
date_created: 2018-12-11T11:58:07Z
date_published: 2012-02-15T00:00:00Z
date_updated: 2021-01-12T06:57:57Z
day: '15'
doi: 10.1523/JNEUROSCI.5243-11.2012
extern: 1
intvolume: '        32'
issue: '7'
month: '02'
page: 2357 - 2376
publication: Journal of Neuroscience
publication_status: published
publisher: Society for Neuroscience
publist_id: '4387'
quality_controlled: 0
status: public
title: Mechanisms underlying signal filtering at a multisynapse contact
type: journal_article
volume: 32
year: '2012'
...
---
_id: '2515'
abstract:
- lang: eng
  text: We investigated the temporal and spatial expression of SK2 in the developing
    mouse hippocampus using molecular and biochemical techniques, quantitative immunogold
    electron microscopy, and electrophysiology. The mRNA encoding SK2 was expressed
    in the developing and adult hippocampus. Western blotting and immunohistochemistry
    showed that SK2 protein increased with age. This was accompanied by a shift in
    subcellular localization. Early in development (P5), SK2 was predominantly localized
    to the endoplasmic reticulum in the pyramidal cell layer. But by P30 SK2 was almost
    exclusively expressed in the dendrites and spines. The level of SK2 at the postsynaptic
    density (PSD) also increased during development. In the adult, SK2 expression
    on the spine plasma membrane showed a proximal-to-distal gradient. Consistent
    with this redistribution and gradient of SK2, the selective SK channel blocker
    apamin increased evoked excitatory postsynaptic potentials (EPSPs) only in CA1
    pyramidal neurons from mice older than P15. However, the effect of apamin on EPSPs
    was not different between synapses in proximal or distal stratum radiatum or stratum
    lacunosum-moleculare in adult. These results show a developmental increase and
    gradient in SK2-containing channel surface expression that underlie their influence
    on neurotransmission, and that may contribute to increased memory acquisition
    during early development.
author:
- first_name: Carmen
  full_name: Ballesteros-Merino, Carmen
  last_name: Ballesteros Merino
- first_name: Michael
  full_name: Lin, Michael
  last_name: Lin
- first_name: Wendy
  full_name: Wu, Wendy W
  last_name: Wu
- first_name: Clotilde
  full_name: Ferrándiz-Huertas, Clotilde
  last_name: Ferrándiz Huertas
- first_name: María
  full_name: Cabañero, María José
  last_name: Cabañero
- first_name: Masahiko
  full_name: Watanabe, Masahiko
  last_name: Watanabe
- first_name: Yugo
  full_name: Fukazawa, Yugo
  last_name: Fukazawa
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: James
  full_name: Maylie, James G
  last_name: Maylie
- first_name: John
  full_name: Adelman, John P
  last_name: Adelman
- first_name: Rafael
  full_name: Luján, Rafael
  last_name: Luján
citation:
  ama: Ballesteros Merino C, Lin M, Wu W, et al.  Developmental profile of SK2 channel
    expression and function in CA1 neurons. <i>Hippocampus</i>. 2012;22(6):1467-1480.
    doi:<a href="https://doi.org/10.1002/hipo.20986">10.1002/hipo.20986</a>
  apa: Ballesteros Merino, C., Lin, M., Wu, W., Ferrándiz Huertas, C., Cabañero, M.,
    Watanabe, M., … Luján, R. (2012).  Developmental profile of SK2 channel expression
    and function in CA1 neurons. <i>Hippocampus</i>. Wiley-Blackwell. <a href="https://doi.org/10.1002/hipo.20986">https://doi.org/10.1002/hipo.20986</a>
  chicago: Ballesteros Merino, Carmen, Michael Lin, Wendy Wu, Clotilde Ferrándiz Huertas,
    María Cabañero, Masahiko Watanabe, Yugo Fukazawa, et al. “ Developmental Profile
    of SK2 Channel Expression and Function in CA1 Neurons.” <i>Hippocampus</i>. Wiley-Blackwell,
    2012. <a href="https://doi.org/10.1002/hipo.20986">https://doi.org/10.1002/hipo.20986</a>.
  ieee: C. Ballesteros Merino <i>et al.</i>, “ Developmental profile of SK2 channel
    expression and function in CA1 neurons,” <i>Hippocampus</i>, vol. 22, no. 6. Wiley-Blackwell,
    pp. 1467–1480, 2012.
  ista: Ballesteros Merino C, Lin M, Wu W, Ferrándiz Huertas C, Cabañero M, Watanabe
    M, Fukazawa Y, Shigemoto R, Maylie J, Adelman J, Luján R. 2012.  Developmental
    profile of SK2 channel expression and function in CA1 neurons. Hippocampus. 22(6),
    1467–1480.
  mla: Ballesteros Merino, Carmen, et al. “ Developmental Profile of SK2 Channel Expression
    and Function in CA1 Neurons.” <i>Hippocampus</i>, vol. 22, no. 6, Wiley-Blackwell,
    2012, pp. 1467–80, doi:<a href="https://doi.org/10.1002/hipo.20986">10.1002/hipo.20986</a>.
  short: C. Ballesteros Merino, M. Lin, W. Wu, C. Ferrándiz Huertas, M. Cabañero,
    M. Watanabe, Y. Fukazawa, R. Shigemoto, J. Maylie, J. Adelman, R. Luján, Hippocampus
    22 (2012) 1467–1480.
date_created: 2018-12-11T11:58:07Z
date_published: 2012-06-01T00:00:00Z
date_updated: 2021-01-12T06:57:57Z
day: '01'
doi: 10.1002/hipo.20986
extern: 1
intvolume: '        22'
issue: '6'
month: '06'
page: 1467 - 1480
publication: Hippocampus
publication_status: published
publisher: Wiley-Blackwell
publist_id: '4386'
quality_controlled: 0
status: public
title: ' Developmental profile of SK2 channel expression and function in CA1 neurons'
type: journal_article
volume: 22
year: '2012'
...
---
_id: '2687'
abstract:
- lang: eng
  text: Left-right asymmetry of human brain function has been known for a century,
    although much of molecular and cellular basis of brain laterality remains to be
    elusive. Recent studies suggest that hippocampal CA3-CA1 excitatory synapses are
    asymmetrically arranged, however, the functional implication of the asymmetrical
    circuitry has not been studied at the behavioral level. In order to address the
    left-right asymmetry of hippocampal function in behaving mice, we analyzed the
    performance of &quot;split-brain&quot; mice in the Barnes maze. The &quot;split-brain&quot;
    mice received ventral hippocampal commissure and corpus callosum transection in
    addition to deprivation of visual input from one eye. In such mice, the hippocampus
    in the side of visual deprivation receives sensory-driven input. Better spatial
    task performance was achieved by the mice which were forced to use the right hippocampus
    than those which were forced to use the left hippocampus. In two-choice spatial
    maze, forced usage of left hippocampus resulted in a comparable performance to
    the right counterpart, suggesting that both hippocampal hemispheres are capable
    of conducting spatial learning. Therefore, the results obtained from the Barnes
    maze suggest that the usage of the right hippocampus improves the accuracy of
    spatial memory. Performance of non-spatial yet hippocampus-dependent tasks (e.g.
    fear conditioning) was not influenced by the laterality of the hippocampus.
author:
- first_name: Yoshiaki
  full_name: Shinohara, Yoshiaki
  last_name: Shinohara
- first_name: Aki
  full_name: Hosoya, Aki
  last_name: Hosoya
- first_name: Nobuyuki
  full_name: Yamasaki, Nobuyuki
  last_name: Yamasaki
- first_name: Hassan
  full_name: Ahmed, Hassan
  last_name: Ahmed
- first_name: Satoko
  full_name: Hattori, Satoko
  last_name: Hattori
- first_name: Megumi
  full_name: Eguchi, Megumi
  last_name: Eguchi
- first_name: Shun
  full_name: Yamaguchi, Shun
  last_name: Yamaguchi
- first_name: Tsuyoshi
  full_name: Miyakawa, Tsuyoshi
  last_name: Miyakawa
- first_name: Hajime
  full_name: Hirase, Hajime
  last_name: Hirase
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
citation:
  ama: Shinohara Y, Hosoya A, Yamasaki N, et al. Right-hemispheric dominance of spatial
    memory in split-brain mice. <i>Hippocampus</i>. 2012;22(2):117-121. doi:<a href="https://doi.org/10.1002/hipo.20886">10.1002/hipo.20886</a>
  apa: Shinohara, Y., Hosoya, A., Yamasaki, N., Ahmed, H., Hattori, S., Eguchi, M.,
    … Shigemoto, R. (2012). Right-hemispheric dominance of spatial memory in split-brain
    mice. <i>Hippocampus</i>. Wiley-Blackwell. <a href="https://doi.org/10.1002/hipo.20886">https://doi.org/10.1002/hipo.20886</a>
  chicago: Shinohara, Yoshiaki, Aki Hosoya, Nobuyuki Yamasaki, Hassan Ahmed, Satoko
    Hattori, Megumi Eguchi, Shun Yamaguchi, Tsuyoshi Miyakawa, Hajime Hirase, and
    Ryuichi Shigemoto. “Right-Hemispheric Dominance of Spatial Memory in Split-Brain
    Mice.” <i>Hippocampus</i>. Wiley-Blackwell, 2012. <a href="https://doi.org/10.1002/hipo.20886">https://doi.org/10.1002/hipo.20886</a>.
  ieee: Y. Shinohara <i>et al.</i>, “Right-hemispheric dominance of spatial memory
    in split-brain mice,” <i>Hippocampus</i>, vol. 22, no. 2. Wiley-Blackwell, pp.
    117–121, 2012.
  ista: Shinohara Y, Hosoya A, Yamasaki N, Ahmed H, Hattori S, Eguchi M, Yamaguchi
    S, Miyakawa T, Hirase H, Shigemoto R. 2012. Right-hemispheric dominance of spatial
    memory in split-brain mice. Hippocampus. 22(2), 117–121.
  mla: Shinohara, Yoshiaki, et al. “Right-Hemispheric Dominance of Spatial Memory
    in Split-Brain Mice.” <i>Hippocampus</i>, vol. 22, no. 2, Wiley-Blackwell, 2012,
    pp. 117–21, doi:<a href="https://doi.org/10.1002/hipo.20886">10.1002/hipo.20886</a>.
  short: Y. Shinohara, A. Hosoya, N. Yamasaki, H. Ahmed, S. Hattori, M. Eguchi, S.
    Yamaguchi, T. Miyakawa, H. Hirase, R. Shigemoto, Hippocampus 22 (2012) 117–121.
date_created: 2018-12-11T11:59:04Z
date_published: 2012-01-01T00:00:00Z
date_updated: 2021-01-12T06:59:03Z
day: '01'
doi: 10.1002/hipo.20886
extern: 1
intvolume: '        22'
issue: '2'
month: '01'
page: 117 - 121
publication: Hippocampus
publication_status: published
publisher: Wiley-Blackwell
publist_id: '4210'
quality_controlled: 0
status: public
title: Right-hemispheric dominance of spatial memory in split-brain mice
type: journal_article
volume: 22
year: '2012'
...
---
_id: '2688'
abstract:
- lang: eng
  text: To gain insights into structure-function relationship of excitatory synapses,
    we revisit our quantitative analysis of synaptic AMPAR by highly sensitive freeze-fracture
    replica labeling in eight different connections. All of these connections showed
    linear correlation between synapse size and AMPAR number indicating a common intra-synapse-type
    relationship in CNS synapses. On the contrary, inter-synapse-type relationship
    is unexpected indicating no correlation between averages of synapse size and AMPAR
    number. Interestingly, connections with large average synapse size and low AMPAR
    density showed high variability of AMPAR number and mosaic distribution within
    the postsynaptic membrane. We propose an idea that these connections may quickly
    exhibit synaptic plasticity by modifying AMPAR density/number whereas those with
    high AMPAR density change their efficacy by modifying synapse size.
author:
- first_name: Yugo
  full_name: Fukazawa, Yugo
  last_name: Fukazawa
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
citation:
  ama: Fukazawa Y, Shigemoto R. Intra-synapse-type and inter-synapse-type relationships
    between synaptic size and AMPAR expression. <i>Current Opinion in Neurobiology</i>.
    2012;22(3):446-452. doi:<a href="https://doi.org/10.1016/j.conb.2012.01.006">10.1016/j.conb.2012.01.006</a>
  apa: Fukazawa, Y., &#38; Shigemoto, R. (2012). Intra-synapse-type and inter-synapse-type
    relationships between synaptic size and AMPAR expression. <i>Current Opinion in
    Neurobiology</i>. Elsevier. <a href="https://doi.org/10.1016/j.conb.2012.01.006">https://doi.org/10.1016/j.conb.2012.01.006</a>
  chicago: Fukazawa, Yugo, and Ryuichi Shigemoto. “Intra-Synapse-Type and Inter-Synapse-Type
    Relationships between Synaptic Size and AMPAR Expression.” <i>Current Opinion
    in Neurobiology</i>. Elsevier, 2012. <a href="https://doi.org/10.1016/j.conb.2012.01.006">https://doi.org/10.1016/j.conb.2012.01.006</a>.
  ieee: Y. Fukazawa and R. Shigemoto, “Intra-synapse-type and inter-synapse-type relationships
    between synaptic size and AMPAR expression,” <i>Current Opinion in Neurobiology</i>,
    vol. 22, no. 3. Elsevier, pp. 446–452, 2012.
  ista: Fukazawa Y, Shigemoto R. 2012. Intra-synapse-type and inter-synapse-type relationships
    between synaptic size and AMPAR expression. Current Opinion in Neurobiology. 22(3),
    446–452.
  mla: Fukazawa, Yugo, and Ryuichi Shigemoto. “Intra-Synapse-Type and Inter-Synapse-Type
    Relationships between Synaptic Size and AMPAR Expression.” <i>Current Opinion
    in Neurobiology</i>, vol. 22, no. 3, Elsevier, 2012, pp. 446–52, doi:<a href="https://doi.org/10.1016/j.conb.2012.01.006">10.1016/j.conb.2012.01.006</a>.
  short: Y. Fukazawa, R. Shigemoto, Current Opinion in Neurobiology 22 (2012) 446–452.
date_created: 2018-12-11T11:59:04Z
date_published: 2012-06-01T00:00:00Z
date_updated: 2021-01-12T06:59:03Z
day: '01'
doi: 10.1016/j.conb.2012.01.006
extern: 1
intvolume: '        22'
issue: '3'
month: '06'
page: 446 - 452
publication: Current Opinion in Neurobiology
publication_status: published
publisher: Elsevier
publist_id: '4209'
quality_controlled: 0
status: public
title: Intra-synapse-type and inter-synapse-type relationships between synaptic size
  and AMPAR expression
type: journal_article
volume: 22
year: '2012'
...
