---
_id: '1978'
abstract:
- lang: eng
text: Complex I is the first and largest enzyme of the respiratory chain and has
a central role in cellular energy production through the coupling of NADH:ubiquinone
electron transfer to proton translocation. It is also implicated in many common
human neurodegenerative diseases. Here, we report the first crystal structure
of the entire, intact complex I (from Thermus thermophilus) at 3.3 Å resolution.
The structure of the 536-kDa complex comprises 16 different subunits, with a total
of 64 transmembrane helices and 9 iron-sulphur clusters. The core fold of subunit
Nqo8 (ND1 in humans) is, unexpectedly, similar to a half-channel of the antiporter-like
subunits. Small subunits nearby form a linked second half-channel, which completes
the fourth proton-translocation pathway (present in addition to the channels in
three antiporter-like subunits). The quinone-binding site is unusually long, narrow
and enclosed. The quinone headgroup binds at the deep end of this chamber, near
iron-sulphur cluster N2. Notably, the chamber is linked to the fourth channel
by a 'funnel' of charged residues. The link continues over the entire membrane
domain as a flexible central axis of charged and polar residues, and probably
has a leading role in the propagation of conformational changes, aided by coupling
elements. The structure suggests that a unique, out-of-the-membrane quinone-reaction
chamber enables the redox energy to drive concerted long-range conformational
changes in the four antiporter-like domains, resulting in translocation of four
protons per cycle.
acknowledgement: This work was funded by the Medical Research Council.
author:
- first_name: Rozbeh
full_name: 'Baradaran, Rozbeh '
last_name: Baradaran
- first_name: John
full_name: Berrisford, John M
last_name: Berrisford
- first_name: Gurdeep
full_name: Minhas, Gurdeep S
last_name: Minhas
- first_name: Leonid A
full_name: Leonid Sazanov
id: 338D39FE-F248-11E8-B48F-1D18A9856A87
last_name: Sazanov
orcid: 0000-0002-0977-7989
citation:
ama: Baradaran R, Berrisford J, Minhas G, Sazanov LA. Crystal structure of the entire
respiratory complex i. Nature. 2013;494(7438):443-448. doi:10.1038/nature11871
apa: Baradaran, R., Berrisford, J., Minhas, G., & Sazanov, L. A. (2013). Crystal
structure of the entire respiratory complex i. Nature. Nature Publishing
Group. https://doi.org/10.1038/nature11871
chicago: Baradaran, Rozbeh, John Berrisford, Gurdeep Minhas, and Leonid A Sazanov.
“Crystal Structure of the Entire Respiratory Complex I.” Nature. Nature
Publishing Group, 2013. https://doi.org/10.1038/nature11871.
ieee: R. Baradaran, J. Berrisford, G. Minhas, and L. A. Sazanov, “Crystal structure
of the entire respiratory complex i,” Nature, vol. 494, no. 7438. Nature
Publishing Group, pp. 443–448, 2013.
ista: Baradaran R, Berrisford J, Minhas G, Sazanov LA. 2013. Crystal structure of
the entire respiratory complex i. Nature. 494(7438), 443–448.
mla: Baradaran, Rozbeh, et al. “Crystal Structure of the Entire Respiratory Complex
I.” Nature, vol. 494, no. 7438, Nature Publishing Group, 2013, pp. 443–48,
doi:10.1038/nature11871.
short: R. Baradaran, J. Berrisford, G. Minhas, L.A. Sazanov, Nature 494 (2013) 443–448.
date_created: 2018-12-11T11:55:01Z
date_published: 2013-02-28T00:00:00Z
date_updated: 2021-01-12T06:54:28Z
day: '28'
doi: 10.1038/nature11871
extern: 1
intvolume: ' 494'
issue: '7438'
month: '02'
page: 443 - 448
publication: Nature
publication_status: published
publisher: Nature Publishing Group
publist_id: '5107'
quality_controlled: 0
status: public
title: Crystal structure of the entire respiratory complex i
type: journal_article
volume: 494
year: '2013'
...
---
_id: '1988'
abstract:
- lang: eng
text: The rod-shaped bacterium Escherichia coli selects the cell center as site
of division with the help of the proteins MinC, MinD, and MinE. This protein system
collectively oscillates between the two cell poles by alternately binding to the
membrane in one of the two cell halves. This dynamic behavior, which emerges from
the interaction of the ATPase MinD and its activator MinE on the cell membrane,
has become a paradigm for protein self-organization. Recently, it has been found
that not only the binding of MinD to the membrane, but also interactions of MinE
with the membrane contribute to Min-protein self-organization. Here, we show that
by accounting for this finding in a computational model, we can comprehensively
describe all observed Min-protein patterns in vivo and in vitro. Furthermore,
by varying the system's geometry, our computations predict patterns that have
not yet been reported. We confirm these predictions experimentally.
author:
- first_name: Mike
full_name: 'Bonny, Mike '
last_name: Bonny
- first_name: Elisabeth
full_name: Fischer-Friedrich, Elisabeth
last_name: Fischer Friedrich
- first_name: Martin
full_name: Martin Loose
id: 462D4284-F248-11E8-B48F-1D18A9856A87
last_name: Loose
orcid: 0000-0001-7309-9724
- first_name: Petra
full_name: 'Schwille, Petra '
last_name: Schwille
- first_name: Karsten
full_name: Kruse, Karsten
last_name: Kruse
citation:
ama: Bonny M, Fischer Friedrich E, Loose M, Schwille P, Kruse K. Membrane binding
of MinE allows for a comprehensive description of Min-protein pattern formation.
PLoS Computational Biology. 2013;9(12). doi:10.1371/journal.pcbi.1003347
apa: Bonny, M., Fischer Friedrich, E., Loose, M., Schwille, P., & Kruse, K.
(2013). Membrane binding of MinE allows for a comprehensive description of Min-protein
pattern formation. PLoS Computational Biology. Public Library of Science.
https://doi.org/10.1371/journal.pcbi.1003347
chicago: Bonny, Mike, Elisabeth Fischer Friedrich, Martin Loose, Petra Schwille,
and Karsten Kruse. “Membrane Binding of MinE Allows for a Comprehensive Description
of Min-Protein Pattern Formation.” PLoS Computational Biology. Public Library
of Science, 2013. https://doi.org/10.1371/journal.pcbi.1003347.
ieee: M. Bonny, E. Fischer Friedrich, M. Loose, P. Schwille, and K. Kruse, “Membrane
binding of MinE allows for a comprehensive description of Min-protein pattern
formation,” PLoS Computational Biology, vol. 9, no. 12. Public Library
of Science, 2013.
ista: Bonny M, Fischer Friedrich E, Loose M, Schwille P, Kruse K. 2013. Membrane
binding of MinE allows for a comprehensive description of Min-protein pattern
formation. PLoS Computational Biology. 9(12).
mla: Bonny, Mike, et al. “Membrane Binding of MinE Allows for a Comprehensive Description
of Min-Protein Pattern Formation.” PLoS Computational Biology, vol. 9,
no. 12, Public Library of Science, 2013, doi:10.1371/journal.pcbi.1003347.
short: M. Bonny, E. Fischer Friedrich, M. Loose, P. Schwille, K. Kruse, PLoS Computational
Biology 9 (2013).
date_created: 2018-12-11T11:55:04Z
date_published: 2013-12-01T00:00:00Z
date_updated: 2021-01-12T06:54:32Z
day: '01'
doi: 10.1371/journal.pcbi.1003347
extern: 1
intvolume: ' 9'
issue: '12'
month: '12'
publication: PLoS Computational Biology
publication_status: published
publisher: Public Library of Science
publist_id: '5095'
quality_controlled: 0
status: public
title: Membrane binding of MinE allows for a comprehensive description of Min-protein
pattern formation
type: journal_article
volume: 9
year: '2013'
...
---
_id: '1991'
abstract:
- lang: eng
text: Although transitions of sex-determination mechanisms are frequent in species
with homomorphic sex chromosomes, heteromorphic sex chromosomes are thought to
represent a terminal evolutionary stage owing to chromosome-specific adaptations
such as dosage compensation or an accumulation of sex-specific mutations. Here
we show that an autosome of Drosophila, the dot chromosome, was ancestrally a
differentiated X chromosome. We analyse the whole genome of true fruitflies (Tephritidae),
flesh flies (Sarcophagidae) and soldier flies (Stratiomyidae) to show that genes
located on the dot chromosome of Drosophila are X-linked in outgroup species,
whereas Drosophila X-linked genes are autosomal. We date this chromosomal transition
to early drosophilid evolution by sequencing the genome of other Drosophilidae.
Our results reveal several puzzling aspects of Drosophila dot chromosome biology
to be possible remnants of its former life as a sex chromosome, such as its minor
feminizing role in sex determination or its targeting by a chromosome-specific
regulatory mechanism. We also show that patterns of biased gene expression of
the dot chromosome during early embryogenesis, oogenesis and spermatogenesis resemble
that of the current X chromosome. Thus, although sex chromosomes are not necessarily
evolutionary end points and can revert back to an autosomal inheritance, the highly
specialized genome architecture of this former X chromosome suggests that severe
fitness costs must be overcome for such a turnover to occur.
acknowledgement: Funded by National Institutes of Health grants (R01GM076007 and R01GM093182)
and a Packard Fellowship to D.B.
author:
- first_name: Beatriz
full_name: Beatriz Vicoso
id: 49E1C5C6-F248-11E8-B48F-1D18A9856A87
last_name: Vicoso
orcid: 0000-0002-4579-8306
- first_name: Doris
full_name: Bachtrog, Doris
last_name: Bachtrog
citation:
ama: Vicoso B, Bachtrog D. Reversal of an ancient sex chromosome to an autosome
in Drosophila. Nature. 2013;499(7458):332-335. doi:10.1038/nature12235
apa: Vicoso, B., & Bachtrog, D. (2013). Reversal of an ancient sex chromosome
to an autosome in Drosophila. Nature. Nature Publishing Group. https://doi.org/10.1038/nature12235
chicago: Vicoso, Beatriz, and Doris Bachtrog. “Reversal of an Ancient Sex Chromosome
to an Autosome in Drosophila.” Nature. Nature Publishing Group, 2013. https://doi.org/10.1038/nature12235.
ieee: B. Vicoso and D. Bachtrog, “Reversal of an ancient sex chromosome to an autosome
in Drosophila,” Nature, vol. 499, no. 7458. Nature Publishing Group, pp.
332–335, 2013.
ista: Vicoso B, Bachtrog D. 2013. Reversal of an ancient sex chromosome to an autosome
in Drosophila. Nature. 499(7458), 332–335.
mla: Vicoso, Beatriz, and Doris Bachtrog. “Reversal of an Ancient Sex Chromosome
to an Autosome in Drosophila.” Nature, vol. 499, no. 7458, Nature Publishing
Group, 2013, pp. 332–35, doi:10.1038/nature12235.
short: B. Vicoso, D. Bachtrog, Nature 499 (2013) 332–335.
date_created: 2018-12-11T11:55:05Z
date_published: 2013-07-18T00:00:00Z
date_updated: 2021-01-12T06:54:33Z
day: '18'
doi: 10.1038/nature12235
extern: 1
intvolume: ' 499'
issue: '7458'
month: '07'
page: 332 - 335
publication: Nature
publication_status: published
publisher: Nature Publishing Group
publist_id: '5092'
quality_controlled: 0
status: public
title: Reversal of an ancient sex chromosome to an autosome in Drosophila
type: journal_article
volume: 499
year: '2013'
...
---
_id: '2000'
abstract:
- lang: eng
text: In this work we present a flexible tool for tumor progression, which simulates
the evolutionary dynamics of cancer. Tumor progression implements a multi-type
branching process where the key parameters are the fitness landscape, the mutation
rate, and the average time of cell division. The fitness of a cancer cell depends
on the mutations it has accumulated. The input to our tool could be any fitness
landscape, mutation rate, and cell division time, and the tool produces the growth
dynamics and all relevant statistics.
alternative_title:
- LNCS
arxiv: 1
author:
- first_name: Johannes
full_name: Reiter, Johannes
id: 4A918E98-F248-11E8-B48F-1D18A9856A87
last_name: Reiter
orcid: 0000-0002-0170-7353
- first_name: Ivana
full_name: Božić, Ivana
last_name: Božić
- first_name: Krishnendu
full_name: Chatterjee, Krishnendu
id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
last_name: Chatterjee
orcid: 0000-0002-4561-241X
- first_name: Martin
full_name: Nowak, Martin
last_name: Nowak
citation:
ama: 'Reiter J, Božić I, Chatterjee K, Nowak M. TTP: Tool for tumor progression.
In: Proceedings of 25th Int. Conf. on Computer Aided Verification. Vol
8044. Lecture Notes in Computer Science. Springer; 2013:101-106. doi:10.1007/978-3-642-39799-8_6'
apa: 'Reiter, J., Božić, I., Chatterjee, K., & Nowak, M. (2013). TTP: Tool for
tumor progression. In Proceedings of 25th Int. Conf. on Computer Aided Verification
(Vol. 8044, pp. 101–106). St. Petersburg, Russia: Springer. https://doi.org/10.1007/978-3-642-39799-8_6'
chicago: 'Reiter, Johannes, Ivana Božić, Krishnendu Chatterjee, and Martin Nowak.
“TTP: Tool for Tumor Progression.” In Proceedings of 25th Int. Conf. on Computer
Aided Verification, 8044:101–6. Lecture Notes in Computer Science. Springer,
2013. https://doi.org/10.1007/978-3-642-39799-8_6.'
ieee: 'J. Reiter, I. Božić, K. Chatterjee, and M. Nowak, “TTP: Tool for tumor progression,”
in Proceedings of 25th Int. Conf. on Computer Aided Verification, St. Petersburg,
Russia, 2013, vol. 8044, pp. 101–106.'
ista: 'Reiter J, Božić I, Chatterjee K, Nowak M. 2013. TTP: Tool for tumor progression.
Proceedings of 25th Int. Conf. on Computer Aided Verification. CAV: Computer Aided
VerificationLecture Notes in Computer Science, LNCS, vol. 8044, 101–106.'
mla: 'Reiter, Johannes, et al. “TTP: Tool for Tumor Progression.” Proceedings
of 25th Int. Conf. on Computer Aided Verification, vol. 8044, Springer, 2013,
pp. 101–06, doi:10.1007/978-3-642-39799-8_6.'
short: J. Reiter, I. Božić, K. Chatterjee, M. Nowak, in:, Proceedings of 25th Int.
Conf. on Computer Aided Verification, Springer, 2013, pp. 101–106.
conference:
end_date: 2013-07-19
location: St. Petersburg, Russia
name: 'CAV: Computer Aided Verification'
start_date: 2013-07-13
date_created: 2018-12-11T11:55:08Z
date_published: 2013-01-01T00:00:00Z
date_updated: 2023-09-07T11:40:43Z
day: '01'
department:
- _id: KrCh
doi: 10.1007/978-3-642-39799-8_6
ec_funded: 1
external_id:
arxiv:
- '1303.5251'
intvolume: ' 8044'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1303.5251
month: '01'
oa: 1
oa_version: Preprint
page: 101 - 106
project:
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
call_identifier: FP7
grant_number: '279307'
name: 'Quantitative Graph Games: Theory and Applications'
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: S 11407_N23
name: Rigorous Systems Engineering
- _id: 2584A770-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: P 23499-N23
name: Modern Graph Algorithmic Techniques in Formal Verification
- _id: 2587B514-B435-11E9-9278-68D0E5697425
name: Microsoft Research Faculty Fellowship
publication: Proceedings of 25th Int. Conf. on Computer Aided Verification
publication_status: published
publisher: Springer
publist_id: '5077'
quality_controlled: '1'
related_material:
record:
- id: '5399'
relation: earlier_version
status: public
- id: '1400'
relation: dissertation_contains
status: public
scopus_import: 1
series_title: Lecture Notes in Computer Science
status: public
title: 'TTP: Tool for tumor progression'
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8044
year: '2013'
...
---
_id: '2009'
abstract:
- lang: eng
text: Traditional statistical methods for confidentiality protection of statistical
databases do not scale well to deal with GWAS databases especially in terms of
guarantees regarding protection from linkage to external information. The more
recent concept of differential privacy, introduced by the cryptographic community,
is an approach which provides a rigorous definition of privacy with meaningful
privacy guarantees in the presence of arbitrary external information, although
the guarantees may come at a serious price in terms of data utility. Building
on such notions, we propose new methods to release aggregate GWAS data without
compromising an individual’s privacy. We present methods for releasing differentially
private minor allele frequencies, chi-square statistics and p-values. We compare
these approaches on simulated data and on a GWAS study of canine hair length involving
685 dogs. We also propose a privacy-preserving method for finding genome-wide
associations based on a differentially-private approach to penalized logistic
regression.
article_processing_charge: No
author:
- first_name: Caroline
full_name: Uhler, Caroline
id: 49ADD78E-F248-11E8-B48F-1D18A9856A87
last_name: Uhler
orcid: 0000-0002-7008-0216
- first_name: Aleksandra
full_name: Slavkovic, Aleksandra
last_name: Slavkovic
- first_name: Stephen
full_name: Fienberg, Stephen
last_name: Fienberg
citation:
ama: Uhler C, Slavkovic A, Fienberg S. Privacy-preserving data sharing for genome-wide
association studies. Journal of Privacy and Confidentiality . 2013;5(1):137-166.
doi:10.29012/jpc.v5i1.629
apa: Uhler, C., Slavkovic, A., & Fienberg, S. (2013). Privacy-preserving data
sharing for genome-wide association studies. Journal of Privacy and Confidentiality
. Carnegie Mellon University. https://doi.org/10.29012/jpc.v5i1.629
chicago: Uhler, Caroline, Aleksandra Slavkovic, and Stephen Fienberg. “Privacy-Preserving
Data Sharing for Genome-Wide Association Studies.” Journal of Privacy and Confidentiality
. Carnegie Mellon University, 2013. https://doi.org/10.29012/jpc.v5i1.629.
ieee: C. Uhler, A. Slavkovic, and S. Fienberg, “Privacy-preserving data sharing
for genome-wide association studies,” Journal of Privacy and Confidentiality
, vol. 5, no. 1. Carnegie Mellon University, pp. 137–166, 2013.
ista: Uhler C, Slavkovic A, Fienberg S. 2013. Privacy-preserving data sharing for
genome-wide association studies. Journal of Privacy and Confidentiality . 5(1),
137–166.
mla: Uhler, Caroline, et al. “Privacy-Preserving Data Sharing for Genome-Wide Association
Studies.” Journal of Privacy and Confidentiality , vol. 5, no. 1, Carnegie
Mellon University, 2013, pp. 137–66, doi:10.29012/jpc.v5i1.629.
short: C. Uhler, A. Slavkovic, S. Fienberg, Journal of Privacy and Confidentiality 5
(2013) 137–166.
date_created: 2018-12-11T11:55:11Z
date_published: 2013-08-01T00:00:00Z
date_updated: 2021-01-12T06:54:41Z
day: '01'
department:
- _id: CaUh
doi: 10.29012/jpc.v5i1.629
intvolume: ' 5'
issue: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: http://repository.cmu.edu/jpc/vol5/iss1/6
month: '08'
oa: 1
oa_version: Published Version
page: 137 - 166
publication: 'Journal of Privacy and Confidentiality '
publication_status: published
publisher: Carnegie Mellon University
publist_id: '5067'
quality_controlled: '1'
status: public
title: Privacy-preserving data sharing for genome-wide association studies
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 5
year: '2013'
...
---
_id: '2010'
abstract:
- lang: eng
text: Many algorithms for inferring causality rely heavily on the faithfulness assumption.
The main justification for imposing this assumption is that the set of unfaithful
distributions has Lebesgue measure zero, since it can be seen as a collection
of hypersurfaces in a hypercube. However, due to sampling error the faithfulness
condition alone is not sufficient for statistical estimation, and strong-faithfulness
has been proposed and assumed to achieve uniform or high-dimensional consistency.
In contrast to the plain faithfulness assumption, the set of distributions that
is not strong-faithful has nonzero Lebesgue measure and in fact, can be surprisingly
large as we show in this paper. We study the strong-faithfulness condition from
a geometric and combinatorial point of view and give upper and lower bounds on
the Lebesgue measure of strong-faithful distributions for various classes of directed
acyclic graphs. Our results imply fundamental limitations for the PC-algorithm
and potentially also for other algorithms based on partial correlation testing
in the Gaussian case.
arxiv: 1
author:
- first_name: Caroline
full_name: Uhler, Caroline
id: 49ADD78E-F248-11E8-B48F-1D18A9856A87
last_name: Uhler
orcid: 0000-0002-7008-0216
- first_name: Garvesh
full_name: Raskutti, Garvesh
last_name: Raskutti
- first_name: Peter
full_name: Bühlmann, Peter
last_name: Bühlmann
- first_name: Bin
full_name: Yu, Bin
last_name: Yu
citation:
ama: Uhler C, Raskutti G, Bühlmann P, Yu B. Geometry of the faithfulness assumption
in causal inference. The Annals of Statistics. 2013;41(2):436-463. doi:10.1214/12-AOS1080
apa: Uhler, C., Raskutti, G., Bühlmann, P., & Yu, B. (2013). Geometry of the
faithfulness assumption in causal inference. The Annals of Statistics.
Institute of Mathematical Statistics. https://doi.org/10.1214/12-AOS1080
chicago: Uhler, Caroline, Garvesh Raskutti, Peter Bühlmann, and Bin Yu. “Geometry
of the Faithfulness Assumption in Causal Inference.” The Annals of Statistics.
Institute of Mathematical Statistics, 2013. https://doi.org/10.1214/12-AOS1080.
ieee: C. Uhler, G. Raskutti, P. Bühlmann, and B. Yu, “Geometry of the faithfulness
assumption in causal inference,” The Annals of Statistics, vol. 41, no.
2. Institute of Mathematical Statistics, pp. 436–463, 2013.
ista: Uhler C, Raskutti G, Bühlmann P, Yu B. 2013. Geometry of the faithfulness
assumption in causal inference. The Annals of Statistics. 41(2), 436–463.
mla: Uhler, Caroline, et al. “Geometry of the Faithfulness Assumption in Causal
Inference.” The Annals of Statistics, vol. 41, no. 2, Institute of Mathematical
Statistics, 2013, pp. 436–63, doi:10.1214/12-AOS1080.
short: C. Uhler, G. Raskutti, P. Bühlmann, B. Yu, The Annals of Statistics 41 (2013)
436–463.
date_created: 2018-12-11T11:55:11Z
date_published: 2013-04-01T00:00:00Z
date_updated: 2021-01-12T06:54:42Z
day: '01'
department:
- _id: CaUh
doi: 10.1214/12-AOS1080
external_id:
arxiv:
- '1207.0547'
intvolume: ' 41'
issue: '2'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: www.doi.org/10.1214/12-AOS1080
month: '04'
oa: 1
oa_version: Published Version
page: 436 - 463
publication: The Annals of Statistics
publication_status: published
publisher: Institute of Mathematical Statistics
publist_id: '5066'
quality_controlled: '1'
scopus_import: 1
status: public
title: Geometry of the faithfulness assumption in causal inference
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 41
year: '2013'
...
---
_id: '2074'
abstract:
- lang: eng
text: 'Sex chromosomes originate from autosomes. The accumulation of sexually antagonistic
mutations on protosex chromosomes selects for a loss of recombination and sets
in motion the evolutionary processes generating heteromorphic sex chromosomes.
Recombination suppression and differentiation are generally viewed as the default
path of sex chromosome evolution, and the occurrence of old, homomorphic sex chromosomes,
such as those of ratite birds, has remained a mystery. Here, we analyze the genome
and transcriptome of emu (Dromaius novaehollandiae) and confirm that most genes
on the sex chromosome are shared between the Z and W. Surprisingly, however, levels
of gene expression are generally sex-biased for all sex-linked genes relative
to autosomes, including those in the pseudoautosomal region, and the male-bias
increases after gonad formation. This expression bias suggests that the emu sex
chromosomes have become masculinized, even in the absence of ZW differentiation.
Thus, birds may have taken different evolutionary solutions to minimize the deleterious
effects imposed by sexually antagonistic mutations: some lineages eliminate recombination
along the protosex chromosomes to physically restrict sexually antagonistic alleles
to one sex, whereas ratites evolved sex-biased expression to confine the product
of a sexually antagonistic allele to the sex it benefits. This difference in conflict
resolution may explain the preservation of recombining, homomorphic sex chromosomes
in other lineages and illustrates the importance of sexually antagonistic mutations
driving the evolution of sex chromosomes. '
author:
- first_name: Beatriz
full_name: Beatriz Vicoso
id: 49E1C5C6-F248-11E8-B48F-1D18A9856A87
last_name: Vicoso
orcid: 0000-0002-4579-8306
- first_name: Vera
full_name: Kaiser, Vera B
last_name: Kaiser
- first_name: Doris
full_name: Bachtrog, Doris
last_name: Bachtrog
citation:
ama: Vicoso B, Kaiser V, Bachtrog D. Sex biased gene expression at homomorphic sex
chromosomes in emus and its implication for sex chromosome evolution. PNAS.
2013;110(16):6453-6458. doi:10.1073/pnas.1217027110
apa: Vicoso, B., Kaiser, V., & Bachtrog, D. (2013). Sex biased gene expression
at homomorphic sex chromosomes in emus and its implication for sex chromosome
evolution. PNAS. National Academy of Sciences. https://doi.org/10.1073/pnas.1217027110
chicago: Vicoso, Beatriz, Vera Kaiser, and Doris Bachtrog. “Sex Biased Gene Expression
at Homomorphic Sex Chromosomes in Emus and Its Implication for Sex Chromosome
Evolution.” PNAS. National Academy of Sciences, 2013. https://doi.org/10.1073/pnas.1217027110.
ieee: B. Vicoso, V. Kaiser, and D. Bachtrog, “Sex biased gene expression at homomorphic
sex chromosomes in emus and its implication for sex chromosome evolution,” PNAS,
vol. 110, no. 16. National Academy of Sciences, pp. 6453–6458, 2013.
ista: Vicoso B, Kaiser V, Bachtrog D. 2013. Sex biased gene expression at homomorphic
sex chromosomes in emus and its implication for sex chromosome evolution. PNAS.
110(16), 6453–6458.
mla: Vicoso, Beatriz, et al. “Sex Biased Gene Expression at Homomorphic Sex Chromosomes
in Emus and Its Implication for Sex Chromosome Evolution.” PNAS, vol. 110,
no. 16, National Academy of Sciences, 2013, pp. 6453–58, doi:10.1073/pnas.1217027110.
short: B. Vicoso, V. Kaiser, D. Bachtrog, PNAS 110 (2013) 6453–6458.
date_created: 2018-12-11T11:55:33Z
date_published: 2013-04-16T00:00:00Z
date_updated: 2021-01-12T06:55:08Z
day: '16'
doi: 10.1073/pnas.1217027110
extern: 1
intvolume: ' 110'
issue: '16'
month: '04'
page: 6453 - 6458
publication: PNAS
publication_status: published
publisher: National Academy of Sciences
publist_id: '4964'
quality_controlled: 0
status: public
title: Sex biased gene expression at homomorphic sex chromosomes in emus and its implication
for sex chromosome evolution
type: journal_article
volume: 110
year: '2013'
...
---
_id: '2076'
abstract:
- lang: eng
text: |
Snakes exhibit genetic sex determination, with female heterogametic sex chromosomes (ZZ males, ZW females). Extensive cytogenetic work has suggested that the level of sex chromosome heteromorphism varies among species, with Boidae having entirely homomorphic sex chromosomes, Viperidae having completely heteromorphic sex chromosomes, and Colubridae showing partial differentiation. Here, we take a genomic approach to compare sex chromosome differentiation in these three snake families. We identify homomorphic sex chromosomes in boas (Boidae), but completely heteromorphic sex chromosomes in both garter snakes (Colubridae) and pygmy rattlesnake (Viperidae). Detection of W-linked gametologs enables us to establish the presence of evolutionary strata on garter and pygmy rattlesnake sex chromosomes where recombination was abolished at different time points. Sequence analysis shows that all strata are shared between pygmy rattlesnake and garter snake, i.e., recombination was abolished between the sex chromosomes before the two lineages diverged. The sex-biased transmission of the Z and its hemizygosity in females can impact patterns of molecular evolution, and we show that rates of evolution for Z-linked genes are increased relative to their pseudoautosomal homologs, both at synonymous and amino acid sites (even after controlling for mutational biases). This demonstrates that mutation rates are male-biased in snakes (male-driven evolution), but also supports faster-Z evolution due to differential selective effects on the Z. Finally, we perform a transcriptome analysis in boa and pygmy rattlesnake to establish baseline levels of sex-biased expression in homomorphic sex chromosomes, and show that heteromorphic ZW chromosomes in rattlesnakes lack chromosome-wide dosage compensation. Our study provides the first full scale overview of the evolution of snake sex chromosomes at the genomic level, thus greatly expanding our knowledge of reptilian and vertebrate sex chromosomes evolution.
acknowledgement: Funded by NIH grants (R01GM076007 and R01GM093182) and a Packard
Fellowship to DB.
author:
- first_name: Beatriz
full_name: Beatriz Vicoso
id: 49E1C5C6-F248-11E8-B48F-1D18A9856A87
last_name: Vicoso
orcid: 0000-0002-4579-8306
- first_name: Jr
full_name: Emerson, Jr J.
last_name: Emerson
- first_name: Yulia
full_name: Zektser, Yulia
last_name: Zektser
- first_name: Shivani
full_name: Mahajan, Shivani
last_name: Mahajan
- first_name: Doris
full_name: Bachtrog, Doris
last_name: Bachtrog
citation:
ama: 'Vicoso B, Emerson J, Zektser Y, Mahajan S, Bachtrog D. Comparative sex chromosome
genomics in snakes: Differentiation evolutionary strata and lack of global dosage
compensation. PLoS Biology. 2013;11(8). doi:10.1371/journal.pbio.1001643'
apa: 'Vicoso, B., Emerson, J., Zektser, Y., Mahajan, S., & Bachtrog, D. (2013).
Comparative sex chromosome genomics in snakes: Differentiation evolutionary strata
and lack of global dosage compensation. PLoS Biology. Public Library of
Science. https://doi.org/10.1371/journal.pbio.1001643'
chicago: 'Vicoso, Beatriz, Jr Emerson, Yulia Zektser, Shivani Mahajan, and Doris
Bachtrog. “Comparative Sex Chromosome Genomics in Snakes: Differentiation Evolutionary
Strata and Lack of Global Dosage Compensation.” PLoS Biology. Public Library
of Science, 2013. https://doi.org/10.1371/journal.pbio.1001643.'
ieee: 'B. Vicoso, J. Emerson, Y. Zektser, S. Mahajan, and D. Bachtrog, “Comparative
sex chromosome genomics in snakes: Differentiation evolutionary strata and lack
of global dosage compensation,” PLoS Biology, vol. 11, no. 8. Public Library
of Science, 2013.'
ista: 'Vicoso B, Emerson J, Zektser Y, Mahajan S, Bachtrog D. 2013. Comparative
sex chromosome genomics in snakes: Differentiation evolutionary strata and lack
of global dosage compensation. PLoS Biology. 11(8).'
mla: 'Vicoso, Beatriz, et al. “Comparative Sex Chromosome Genomics in Snakes: Differentiation
Evolutionary Strata and Lack of Global Dosage Compensation.” PLoS Biology,
vol. 11, no. 8, Public Library of Science, 2013, doi:10.1371/journal.pbio.1001643.'
short: B. Vicoso, J. Emerson, Y. Zektser, S. Mahajan, D. Bachtrog, PLoS Biology
11 (2013).
date_created: 2018-12-11T11:55:34Z
date_published: 2013-08-27T00:00:00Z
date_updated: 2021-01-12T06:55:09Z
day: '27'
doi: 10.1371/journal.pbio.1001643
extern: 1
intvolume: ' 11'
issue: '8'
license: https://creativecommons.org/licenses/by/4.0/
month: '08'
publication: PLoS Biology
publication_status: published
publisher: Public Library of Science
publist_id: '4962'
quality_controlled: 0
status: public
title: 'Comparative sex chromosome genomics in snakes: Differentiation evolutionary
strata and lack of global dosage compensation'
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
volume: 11
year: '2013'
...
---
_id: '2107'
abstract:
- lang: eng
text: We present a method for fabrication-oriented design of actuated deformable
characters that allows a user to automatically create physical replicas of digitally
designed characters using rapid manufacturing technologies. Given a deformable
character and a set of target poses as input, our method computes a small set
of actuators along with their locations on the surface and optimizes the internal
material distribution such that the resulting character exhibits the desired deformation
behavior. We approach this problem with a dedicated algorithm that combines finite-element
analysis, sparse regularization, and constrained optimization. We validate our
pipeline on a set of two- and three-dimensional example characters and present
results in simulation and physically-fabricated prototypes.
acknowledgement: This work was partly funded by the NCCR Co-Me of the Swiss NSF
author:
- first_name: Mélina
full_name: Skouras, Mélina
last_name: Skouras
- first_name: Bernhard
full_name: Thomaszewski, Bernhard
last_name: Thomaszewski
- first_name: Stelian
full_name: Coros, Stelian
last_name: Coros
- first_name: Bernd
full_name: Bernd Bickel
id: 49876194-F248-11E8-B48F-1D18A9856A87
last_name: Bickel
orcid: 0000-0001-6511-9385
- first_name: Markus
full_name: Groß, Markus S
last_name: Groß
citation:
ama: Skouras M, Thomaszewski B, Coros S, Bickel B, Groß M. Computational design
of actuated deformable characters. ACM Transactions on Graphics. 2013;32(4).
doi:10.1145/2461912.2461979
apa: Skouras, M., Thomaszewski, B., Coros, S., Bickel, B., & Groß, M. (2013).
Computational design of actuated deformable characters. ACM Transactions on
Graphics. ACM. https://doi.org/10.1145/2461912.2461979
chicago: Skouras, Mélina, Bernhard Thomaszewski, Stelian Coros, Bernd Bickel, and
Markus Groß. “Computational Design of Actuated Deformable Characters.” ACM
Transactions on Graphics. ACM, 2013. https://doi.org/10.1145/2461912.2461979.
ieee: M. Skouras, B. Thomaszewski, S. Coros, B. Bickel, and M. Groß, “Computational
design of actuated deformable characters,” ACM Transactions on Graphics,
vol. 32, no. 4. ACM, 2013.
ista: Skouras M, Thomaszewski B, Coros S, Bickel B, Groß M. 2013. Computational
design of actuated deformable characters. ACM Transactions on Graphics. 32(4).
mla: Skouras, Mélina, et al. “Computational Design of Actuated Deformable Characters.”
ACM Transactions on Graphics, vol. 32, no. 4, ACM, 2013, doi:10.1145/2461912.2461979.
short: M. Skouras, B. Thomaszewski, S. Coros, B. Bickel, M. Groß, ACM Transactions
on Graphics 32 (2013).
date_created: 2018-12-11T11:55:45Z
date_published: 2013-07-01T00:00:00Z
date_updated: 2021-01-12T06:55:21Z
day: '01'
doi: 10.1145/2461912.2461979
extern: 1
intvolume: ' 32'
issue: '4'
month: '07'
publication: ACM Transactions on Graphics
publication_status: published
publisher: ACM
publist_id: '4926'
quality_controlled: 0
status: public
title: Computational design of actuated deformable characters
type: journal_article
volume: 32
year: '2013'
...
---
_id: '2108'
abstract:
- lang: eng
text: 'We present an interactive design system that allows non-expert users to create
animated mechanical characters. Given an articulated character as input, the user
iteratively creates an animation by sketching motion curves indicating how different
parts of the character should move. For each motion curve, our framework creates
an optimized mechanism that reproduces it as closely as possible. The resulting
mechanisms are attached to the character and then connected to each other using
gear trains, which are created in a semi-automated fashion. The mechanical assemblies
generated with our system can be driven with a single input driver, such as a
hand-operated crank or an electric motor, and they can be fabricated using rapid
prototyping devices. We demonstrate the versatility of our approach by designing
a wide range of mechanical characters, several of which we manufactured using
3D printing. While our pipeline is designed for characters driven by planar mechanisms,
significant parts of it extend directly to non-planar mechanisms, allowing us
to create characters with compelling 3D motions. '
author:
- first_name: Stelian
full_name: Coros, Stelian
last_name: Coros
- first_name: Bernhard
full_name: Thomaszewski, Bernhard
last_name: Thomaszewski
- first_name: Gioacchino
full_name: Noris, Gioacchino
last_name: Noris
- first_name: Shinjiro
full_name: Sueda, Shinjiro
last_name: Sueda
- first_name: Moira
full_name: Forberg, Moira
last_name: Forberg
- first_name: Robert
full_name: Sumner, Robert W
last_name: Sumner
- first_name: Wojciech
full_name: Matusik, Wojciech
last_name: Matusik
- first_name: Bernd
full_name: Bernd Bickel
id: 49876194-F248-11E8-B48F-1D18A9856A87
last_name: Bickel
orcid: 0000-0001-6511-9385
citation:
ama: Coros S, Thomaszewski B, Noris G, et al. Computational design of mechanical
characters. ACM Transactions on Graphics. 2013;32(4). doi:10.1145/2461912.2461953
apa: Coros, S., Thomaszewski, B., Noris, G., Sueda, S., Forberg, M., Sumner, R.,
… Bickel, B. (2013). Computational design of mechanical characters. ACM Transactions
on Graphics. ACM. https://doi.org/10.1145/2461912.2461953
chicago: Coros, Stelian, Bernhard Thomaszewski, Gioacchino Noris, Shinjiro Sueda,
Moira Forberg, Robert Sumner, Wojciech Matusik, and Bernd Bickel. “Computational
Design of Mechanical Characters.” ACM Transactions on Graphics. ACM, 2013.
https://doi.org/10.1145/2461912.2461953.
ieee: S. Coros et al., “Computational design of mechanical characters,” ACM
Transactions on Graphics, vol. 32, no. 4. ACM, 2013.
ista: Coros S, Thomaszewski B, Noris G, Sueda S, Forberg M, Sumner R, Matusik W,
Bickel B. 2013. Computational design of mechanical characters. ACM Transactions
on Graphics. 32(4).
mla: Coros, Stelian, et al. “Computational Design of Mechanical Characters.” ACM
Transactions on Graphics, vol. 32, no. 4, ACM, 2013, doi:10.1145/2461912.2461953.
short: S. Coros, B. Thomaszewski, G. Noris, S. Sueda, M. Forberg, R. Sumner, W.
Matusik, B. Bickel, ACM Transactions on Graphics 32 (2013).
date_created: 2018-12-11T11:55:46Z
date_published: 2013-07-01T00:00:00Z
date_updated: 2021-01-12T06:55:21Z
day: '01'
doi: 10.1145/2461912.2461953
extern: 1
intvolume: ' 32'
issue: '4'
month: '07'
publication: ACM Transactions on Graphics
publication_status: published
publisher: ACM
publist_id: '4927'
quality_controlled: 0
status: public
title: Computational design of mechanical characters
type: journal_article
volume: 32
year: '2013'
...
---
_id: '2109'
abstract:
- lang: eng
text: Most additive manufacturing technologies work by layering, i.e. slicing the
shape and then generating each slice independently. This introduces an anisotropy
into the process, often as different accuracies in the tangential and normal directions,
but also in terms of other parameters such as build speed or tensile strength
and strain. We model this as an anisotropic cubic element. Our approach then finds
a compromise between modeling each part of the shape individually in the best
possible direction and using one direction for the whole shape part. In particular,
we compute an orthogonal basis and consider only the three basis vectors as slice
normals (i.e. fabrication directions). Then we optimize a decomposition of the
shape along this basis so that each part can be consistently sliced along one
of the basis vectors. In simulation, we show that this approach is superior to
slicing the whole shape in one direction, only. It also has clear benefits if
the shape is larger than the build volume of the available equipment.
author:
- first_name: Kristian
full_name: Hildebrand, Kristian
last_name: Hildebrand
- first_name: Bernd
full_name: Bernd Bickel
id: 49876194-F248-11E8-B48F-1D18A9856A87
last_name: Bickel
orcid: 0000-0001-6511-9385
- first_name: Marc
full_name: Alexa, Marc
last_name: Alexa
citation:
ama: Hildebrand K, Bickel B, Alexa M. Orthogonal slicing for additive manufacturing.
Computers and Graphics (Pergamon). 2013;37(6):669-675. doi:10.1016/j.cag.2013.05.011
apa: Hildebrand, K., Bickel, B., & Alexa, M. (2013). Orthogonal slicing for
additive manufacturing. Computers and Graphics (Pergamon). Elsevier. https://doi.org/10.1016/j.cag.2013.05.011
chicago: Hildebrand, Kristian, Bernd Bickel, and Marc Alexa. “Orthogonal Slicing
for Additive Manufacturing.” Computers and Graphics (Pergamon). Elsevier,
2013. https://doi.org/10.1016/j.cag.2013.05.011.
ieee: K. Hildebrand, B. Bickel, and M. Alexa, “Orthogonal slicing for additive manufacturing,”
Computers and Graphics (Pergamon), vol. 37, no. 6. Elsevier, pp. 669–675,
2013.
ista: Hildebrand K, Bickel B, Alexa M. 2013. Orthogonal slicing for additive manufacturing.
Computers and Graphics (Pergamon). 37(6), 669–675.
mla: Hildebrand, Kristian, et al. “Orthogonal Slicing for Additive Manufacturing.”
Computers and Graphics (Pergamon), vol. 37, no. 6, Elsevier, 2013, pp.
669–75, doi:10.1016/j.cag.2013.05.011.
short: K. Hildebrand, B. Bickel, M. Alexa, Computers and Graphics (Pergamon) 37
(2013) 669–675.
date_created: 2018-12-11T11:55:46Z
date_published: 2013-10-01T00:00:00Z
date_updated: 2021-01-12T06:55:22Z
day: '01'
doi: 10.1016/j.cag.2013.05.011
extern: 1
intvolume: ' 37'
issue: '6'
month: '10'
page: 669 - 675
publication: Computers and Graphics (Pergamon)
publication_status: published
publisher: Elsevier
publist_id: '4924'
quality_controlled: 0
status: public
title: Orthogonal slicing for additive manufacturing
type: journal_article
volume: 37
year: '2013'
...
---
_id: '2110'
abstract:
- lang: eng
text: 'We present a method for practical physical reproduction and design of homogeneous
materials with desired subsurface scattering. Our process uses a collection of
different pigments that can be suspended in a clear base material. Our goal is
to determine pigment concentrations that best reproduce the appearance and subsurface
scattering of a given target material. In order to achieve this task we first
fabricate a collection of material samples composed of known mixtures of the available
pigments with the base material. We then acquire their reflectance profiles using
a custom-built measurement device. We use the same device to measure the reflectance
profile of a target material. Based on the database of mappings from pigment concentrations
to reflectance profiles, we use an optimization process to compute the concentration
of pigments to best replicate the target material appearance. We demonstrate the
practicality of our method by reproducing a variety of different translucent materials.
We also present a tool that allows the user to explore the range of achievable
appearances for a given set of pigments. '
author:
- first_name: Marios
full_name: Papas, Marios
last_name: Papas
- first_name: Christian
full_name: Regg, Christian
last_name: Regg
- first_name: Wojciech
full_name: Jarosz, Wojciech
last_name: Jarosz
- first_name: Bernd
full_name: Bernd Bickel
id: 49876194-F248-11E8-B48F-1D18A9856A87
last_name: Bickel
orcid: 0000-0001-6511-9385
- first_name: Philip
full_name: Jackson, Philip V
last_name: Jackson
- first_name: Wojciech
full_name: Matusik, Wojciech
last_name: Matusik
- first_name: Steve
full_name: Marschner, Steve
last_name: Marschner
- first_name: Markus
full_name: Groß, Markus S
last_name: Groß
citation:
ama: Papas M, Regg C, Jarosz W, et al. Fabricating translucent materials using continuous
pigment mixtures. ACM Transactions on Graphics. 2013;32(4). doi:10.1145/2461912.2461974
apa: Papas, M., Regg, C., Jarosz, W., Bickel, B., Jackson, P., Matusik, W., … Groß,
M. (2013). Fabricating translucent materials using continuous pigment mixtures.
ACM Transactions on Graphics. ACM. https://doi.org/10.1145/2461912.2461974
chicago: Papas, Marios, Christian Regg, Wojciech Jarosz, Bernd Bickel, Philip Jackson,
Wojciech Matusik, Steve Marschner, and Markus Groß. “Fabricating Translucent Materials
Using Continuous Pigment Mixtures.” ACM Transactions on Graphics. ACM,
2013. https://doi.org/10.1145/2461912.2461974.
ieee: M. Papas et al., “Fabricating translucent materials using continuous
pigment mixtures,” ACM Transactions on Graphics, vol. 32, no. 4. ACM, 2013.
ista: Papas M, Regg C, Jarosz W, Bickel B, Jackson P, Matusik W, Marschner S, Groß
M. 2013. Fabricating translucent materials using continuous pigment mixtures.
ACM Transactions on Graphics. 32(4).
mla: Papas, Marios, et al. “Fabricating Translucent Materials Using Continuous Pigment
Mixtures.” ACM Transactions on Graphics, vol. 32, no. 4, ACM, 2013, doi:10.1145/2461912.2461974.
short: M. Papas, C. Regg, W. Jarosz, B. Bickel, P. Jackson, W. Matusik, S. Marschner,
M. Groß, ACM Transactions on Graphics 32 (2013).
date_created: 2018-12-11T11:55:46Z
date_published: 2013-07-01T00:00:00Z
date_updated: 2021-01-12T06:55:22Z
day: '01'
doi: 10.1145/2461912.2461974
extern: 1
intvolume: ' 32'
issue: '4'
month: '07'
publication: ACM Transactions on Graphics
publication_status: published
publisher: ACM
publist_id: '4925'
quality_controlled: 0
status: public
title: Fabricating translucent materials using continuous pigment mixtures
type: journal_article
volume: 32
year: '2013'
...
---
_id: '2111'
abstract:
- lang: eng
text: Animated animatronic figures are a unique way to give physical presence to
a character. However, their movement and expressions are often limited due to
mechanical constraints. In this paper, we propose a complete process for augmenting
physical avatars using projector-based illumination, significantly increasing
their expressiveness. Given an input animation, the system decomposes the motion
into low-frequency motion that can be physically reproduced by the animatronic
head and high-frequency details that are added using projected shading. At the
core is a spatio-temporal optimization process that compresses the motion in gradient
space, ensuring faithful motion replay while respecting the physical limitations
of the system. We also propose a complete multi-camera and projection system,
including a novel defocused projection and subsurface scattering compensation
scheme. The result of our system is a highly expressive physical avatar that features
facial details and motion otherwise unattainable due to physical constraints.
author:
- first_name: Amit
full_name: Bermano, Amit H
last_name: Bermano
- first_name: Philipp
full_name: Bruschweiler, Philipp
last_name: Bruschweiler
- first_name: Anselm
full_name: Grundhöfer, Anselm
last_name: Grundhöfer
- first_name: Daisuke
full_name: Iwai, Daisuke
last_name: Iwai
- first_name: Bernd
full_name: Bernd Bickel
id: 49876194-F248-11E8-B48F-1D18A9856A87
last_name: Bickel
orcid: 0000-0001-6511-9385
- first_name: Markus
full_name: Groß, Markus S
last_name: Groß
citation:
ama: Bermano A, Bruschweiler P, Grundhöfer A, Iwai D, Bickel B, Groß M. Augmenting
physical avatars using projector-based illumination. ACM Transactions on Graphics.
2013;32(6). doi:10.1145/2508363.2508416
apa: Bermano, A., Bruschweiler, P., Grundhöfer, A., Iwai, D., Bickel, B., &
Groß, M. (2013). Augmenting physical avatars using projector-based illumination.
ACM Transactions on Graphics. ACM. https://doi.org/10.1145/2508363.2508416
chicago: Bermano, Amit, Philipp Bruschweiler, Anselm Grundhöfer, Daisuke Iwai, Bernd
Bickel, and Markus Groß. “Augmenting Physical Avatars Using Projector-Based Illumination.”
ACM Transactions on Graphics. ACM, 2013. https://doi.org/10.1145/2508363.2508416.
ieee: A. Bermano, P. Bruschweiler, A. Grundhöfer, D. Iwai, B. Bickel, and M. Groß,
“Augmenting physical avatars using projector-based illumination,” ACM Transactions
on Graphics, vol. 32, no. 6. ACM, 2013.
ista: Bermano A, Bruschweiler P, Grundhöfer A, Iwai D, Bickel B, Groß M. 2013. Augmenting
physical avatars using projector-based illumination. ACM Transactions on Graphics.
32(6).
mla: Bermano, Amit, et al. “Augmenting Physical Avatars Using Projector-Based Illumination.”
ACM Transactions on Graphics, vol. 32, no. 6, ACM, 2013, doi:10.1145/2508363.2508416.
short: A. Bermano, P. Bruschweiler, A. Grundhöfer, D. Iwai, B. Bickel, M. Groß,
ACM Transactions on Graphics 32 (2013).
date_created: 2018-12-11T11:55:47Z
date_published: 2013-11-01T00:00:00Z
date_updated: 2021-01-12T06:55:23Z
day: '01'
doi: 10.1145/2508363.2508416
extern: 1
intvolume: ' 32'
issue: '6'
month: '11'
publication: ACM Transactions on Graphics
publication_status: published
publisher: ACM
publist_id: '4922'
quality_controlled: 0
status: public
title: Augmenting physical avatars using projector-based illumination
type: journal_article
volume: 32
year: '2013'
...
---
_id: '2112'
abstract:
- lang: eng
text: Force-deformation measurements of cloth exhibit significant hysteresis, and
many researchers have identified internal friction as the source of this effect.
However, it has not been incorporated into computer animation models of cloth.
In this paper, we propose a model of internal friction based on an augmented reparameterization
of Dahl's model, and we show that this model provides a good match to several
important features of cloth hysteresis even with a minimal set of parameters.
We also propose novel parameter estimation procedures that are based on simple
and inexpensive setups and need only sparse data, as opposed to the complex hardware
and dense data acquisition of previous methods. Finally, we provide an algorithm
for the efficient simulation of internal friction, and we demonstrate it on simulation
examples that show disparate behavior with and without internal friction.
acknowledgement: This work was supported in part by the European Research Council
(ERC-2011-StG-280135 Animetrics) and the Spanish Ministry of Economy (TIN2012-35840).
author:
- first_name: Eder
full_name: Miguel, Eder
last_name: Miguel
- first_name: Rasmus
full_name: Tamstorf, Rasmus
last_name: Tamstorf
- first_name: Derek
full_name: Bradley, Derek J
last_name: Bradley
- first_name: Sara
full_name: Schvartzman, Sara C
last_name: Schvartzman
- first_name: Bernhard
full_name: Thomaszewski, Bernhard
last_name: Thomaszewski
- first_name: Bernd
full_name: Bernd Bickel
id: 49876194-F248-11E8-B48F-1D18A9856A87
last_name: Bickel
orcid: 0000-0001-6511-9385
- first_name: Wojciech
full_name: Matusik, Wojciech
last_name: Matusik
- first_name: Steve
full_name: Marschner, Steve
last_name: Marschner
- first_name: Miguel
full_name: Otaduy, Miguel A
last_name: Otaduy
citation:
ama: Miguel E, Tamstorf R, Bradley D, et al. Modeling and estimation of internal
friction in cloth. ACM Transactions on Graphics. 2013;32(6). doi:10.1145/2508363.2508389
apa: Miguel, E., Tamstorf, R., Bradley, D., Schvartzman, S., Thomaszewski, B., Bickel,
B., … Otaduy, M. (2013). Modeling and estimation of internal friction in cloth.
ACM Transactions on Graphics. ACM. https://doi.org/10.1145/2508363.2508389
chicago: Miguel, Eder, Rasmus Tamstorf, Derek Bradley, Sara Schvartzman, Bernhard
Thomaszewski, Bernd Bickel, Wojciech Matusik, Steve Marschner, and Miguel Otaduy.
“Modeling and Estimation of Internal Friction in Cloth.” ACM Transactions on
Graphics. ACM, 2013. https://doi.org/10.1145/2508363.2508389
.
ieee: E. Miguel et al., “Modeling and estimation of internal friction in
cloth,” ACM Transactions on Graphics, vol. 32, no. 6. ACM, 2013.
ista: Miguel E, Tamstorf R, Bradley D, Schvartzman S, Thomaszewski B, Bickel B,
Matusik W, Marschner S, Otaduy M. 2013. Modeling and estimation of internal friction
in cloth. ACM Transactions on Graphics. 32(6).
mla: Miguel, Eder, et al. “Modeling and Estimation of Internal Friction in Cloth.”
ACM Transactions on Graphics, vol. 32, no. 6, ACM, 2013, doi:10.1145/2508363.2508389 .
short: E. Miguel, R. Tamstorf, D. Bradley, S. Schvartzman, B. Thomaszewski, B. Bickel,
W. Matusik, S. Marschner, M. Otaduy, ACM Transactions on Graphics 32 (2013).
date_created: 2018-12-11T11:55:47Z
date_published: 2013-11-01T00:00:00Z
date_updated: 2021-01-12T06:55:23Z
day: '01'
doi: '10.1145/2508363.2508389 '
extern: 1
intvolume: ' 32'
issue: '6'
month: '11'
publication: ACM Transactions on Graphics
publication_status: published
publisher: ACM
publist_id: '4923'
quality_controlled: 0
status: public
title: Modeling and estimation of internal friction in cloth
type: journal_article
volume: 32
year: '2013'
...
---
_id: '2113'
abstract:
- lang: eng
text: A new method fabricates custom surface reflectance and spatially varying bidirectional
reflectance distribution functions (svBRDFs). Researchers optimize a microgeometry
for a range of normal distribution functions and simulate the resulting surface's
effective reflectance. Using the simulation's results, they reproduce an input
svBRDF's appearance by distributing the microgeometry on the printed material's
surface. This method lets people print svBRDFs on planar samples with current
3D printing technology, even with a limited set of printing materials. It extends
naturally to printing svBRDFs on arbitrary shapes.
author:
- first_name: Olivier
full_name: Rouiller, Olivier
last_name: Rouiller
- first_name: Bernd
full_name: Bernd Bickel
id: 49876194-F248-11E8-B48F-1D18A9856A87
last_name: Bickel
orcid: 0000-0001-6511-9385
- first_name: Jan
full_name: Kautz, Jan
last_name: Kautz
- first_name: Wojciech
full_name: Matusik, Wojciech
last_name: Matusik
- first_name: Marc
full_name: Alexa, Marc
last_name: Alexa
citation:
ama: Rouiller O, Bickel B, Kautz J, Matusik W, Alexa M. 3D printing spatially varying
BRDFs. IEEE Computer Graphics and Applications. 2013;33(6):48-57. doi:10.1109/MCG.2013.82
apa: Rouiller, O., Bickel, B., Kautz, J., Matusik, W., & Alexa, M. (2013). 3D
printing spatially varying BRDFs. IEEE Computer Graphics and Applications.
IEEE. https://doi.org/10.1109/MCG.2013.82
chicago: Rouiller, Olivier, Bernd Bickel, Jan Kautz, Wojciech Matusik, and Marc
Alexa. “3D Printing Spatially Varying BRDFs.” IEEE Computer Graphics and Applications.
IEEE, 2013. https://doi.org/10.1109/MCG.2013.82
.
ieee: O. Rouiller, B. Bickel, J. Kautz, W. Matusik, and M. Alexa, “3D printing spatially
varying BRDFs,” IEEE Computer Graphics and Applications, vol. 33, no. 6.
IEEE, pp. 48–57, 2013.
ista: Rouiller O, Bickel B, Kautz J, Matusik W, Alexa M. 2013. 3D printing spatially
varying BRDFs. IEEE Computer Graphics and Applications. 33(6), 48–57.
mla: Rouiller, Olivier, et al. “3D Printing Spatially Varying BRDFs.” IEEE Computer
Graphics and Applications, vol. 33, no. 6, IEEE, 2013, pp. 48–57, doi:10.1109/MCG.2013.82 .
short: O. Rouiller, B. Bickel, J. Kautz, W. Matusik, M. Alexa, IEEE Computer Graphics
and Applications 33 (2013) 48–57.
date_created: 2018-12-11T11:55:47Z
date_published: 2013-09-23T00:00:00Z
date_updated: 2021-01-12T06:55:23Z
day: '23'
doi: '10.1109/MCG.2013.82 '
extern: 1
intvolume: ' 33'
issue: '6'
month: '09'
page: 48 - 57
publication: IEEE Computer Graphics and Applications
publication_status: published
publisher: IEEE
publist_id: '4920'
quality_controlled: 0
status: public
title: 3D printing spatially varying BRDFs
type: journal_article
volume: 33
year: '2013'
...
---
_id: '2114'
abstract:
- lang: eng
text: 3D printing is considered a disruptive technology with a potentially tremendous
socioeconomic impact. The three articles in this special issue illustrate how
novel computer graphics approaches are advancing such digital fabrication.
author:
- first_name: Bernd
full_name: Bernd Bickel
id: 49876194-F248-11E8-B48F-1D18A9856A87
last_name: Bickel
orcid: 0000-0001-6511-9385
- first_name: Marc
full_name: Alexa, Marc
last_name: Alexa
citation:
ama: 'Bickel B, Alexa M. Computational aspects of fabrication: Modeling, design
and 3d printing. IEEE Computer Graphics and Applications. 2013;33(6):24-25.
doi:10.1109/MCG.2013.89'
apa: 'Bickel, B., & Alexa, M. (2013). Computational aspects of fabrication:
Modeling, design and 3d printing. IEEE Computer Graphics and Applications.
IEEE. https://doi.org/10.1109/MCG.2013.89'
chicago: 'Bickel, Bernd, and Marc Alexa. “Computational Aspects of Fabrication:
Modeling, Design and 3d Printing.” IEEE Computer Graphics and Applications.
IEEE, 2013. https://doi.org/10.1109/MCG.2013.89.'
ieee: 'B. Bickel and M. Alexa, “Computational aspects of fabrication: Modeling,
design and 3d printing,” IEEE Computer Graphics and Applications, vol.
33, no. 6. IEEE, pp. 24–25, 2013.'
ista: 'Bickel B, Alexa M. 2013. Computational aspects of fabrication: Modeling,
design and 3d printing. IEEE Computer Graphics and Applications. 33(6), 24–25.'
mla: 'Bickel, Bernd, and Marc Alexa. “Computational Aspects of Fabrication: Modeling,
Design and 3d Printing.” IEEE Computer Graphics and Applications, vol.
33, no. 6, IEEE, 2013, pp. 24–25, doi:10.1109/MCG.2013.89.'
short: B. Bickel, M. Alexa, IEEE Computer Graphics and Applications 33 (2013) 24–25.
date_created: 2018-12-11T11:55:48Z
date_published: 2013-12-01T00:00:00Z
date_updated: 2021-01-12T06:55:24Z
day: '01'
doi: 10.1109/MCG.2013.89
extern: 1
intvolume: ' 33'
issue: '6'
month: '12'
page: 24 - 25
publication: IEEE Computer Graphics and Applications
publication_status: published
publisher: IEEE
publist_id: '4921'
quality_controlled: 0
status: public
title: 'Computational aspects of fabrication: Modeling, design and 3d printing'
type: journal_article
volume: 33
year: '2013'
...
---
_id: '2117'
abstract:
- lang: eng
text: We prove new upper and lower bounds for Banach space-valued stochastic integrals
with respect to a compensated Poisson random measure. Our estimates apply to Banach
spaces with non-trivial martingale (co)type and extend various results in the
literature. We also develop a Malliavin framework to interpret Poisson stochastic
integrals as vector-valued Skorohod integrals, and prove a Clark-Ocone representation
formula.
acknowledgement: The first and third named authors were supported by VICI subsidy
639.033.604 of the Netherlands Organisation for Scientific Research (NWO). The first
and second named authors were supported by the German Research Foundation in the
Collaborative Research C
author:
- first_name: Sjoerd
full_name: Dirksen, Sjoerd
last_name: Dirksen
- first_name: Jan
full_name: Jan Maas
id: 4C5696CE-F248-11E8-B48F-1D18A9856A87
last_name: Maas
orcid: 0000-0002-0845-1338
- first_name: Jan
full_name: van Neerven, Jan M
last_name: Van Neerven
citation:
ama: Dirksen S, Maas J, Van Neerven J. Poisson stochastic integration in Banach
spaces. Electronic Journal of Probability. 2013;18. doi:10.1214/EJP.v18-2945
apa: Dirksen, S., Maas, J., & Van Neerven, J. (2013). Poisson stochastic integration
in Banach spaces. Electronic Journal of Probability. Institute of Mathematical
Statistics. https://doi.org/10.1214/EJP.v18-2945
chicago: Dirksen, Sjoerd, Jan Maas, and Jan Van Neerven. “Poisson Stochastic Integration
in Banach Spaces.” Electronic Journal of Probability. Institute of Mathematical
Statistics, 2013. https://doi.org/10.1214/EJP.v18-2945
.
ieee: S. Dirksen, J. Maas, and J. Van Neerven, “Poisson stochastic integration in
Banach spaces,” Electronic Journal of Probability, vol. 18. Institute of
Mathematical Statistics, 2013.
ista: Dirksen S, Maas J, Van Neerven J. 2013. Poisson stochastic integration in
Banach spaces. Electronic Journal of Probability. 18.
mla: Dirksen, Sjoerd, et al. “Poisson Stochastic Integration in Banach Spaces.”
Electronic Journal of Probability, vol. 18, Institute of Mathematical Statistics,
2013, doi:10.1214/EJP.v18-2945
.
short: S. Dirksen, J. Maas, J. Van Neerven, Electronic Journal of Probability 18
(2013).
date_created: 2018-12-11T11:55:49Z
date_published: 2013-11-18T00:00:00Z
date_updated: 2021-01-12T06:55:24Z
day: '18'
doi: '10.1214/EJP.v18-2945 '
extern: 1
intvolume: ' 18'
main_file_link:
- open_access: '1'
url: 'http://arxiv.org/abs/1307.7901 '
month: '11'
oa: 1
publication: Electronic Journal of Probability
publication_status: published
publisher: Institute of Mathematical Statistics
publist_id: '4917'
quality_controlled: 0
status: public
title: Poisson stochastic integration in Banach spaces
type: journal_article
volume: 18
year: '2013'
...
---
_id: '2129'
abstract:
- lang: eng
text: "This paper continues the investigation of `Wasserstein-like' transportation
distances for probability measures on discrete sets. We prove that the discrete
transportation metrics on the d-dimensional discrete torus with mesh size 1/N
converge, when N→∞, to the standard 2-Wasserstein distance W_2 on the continuous
torus in the sense of Gromov-Hausdorff. This is the first convergence result for
the recently developed discrete transportation metrics. The result shows the compatibility
between these metrics and the well-established 2-Wasserstein metric. \n\n\n"
acknowledgement: JM acknowledges support by Rubicon subsidy 680-50-0901 of the Netherlands
Organisation for Scientific Research (NWO).
author:
- first_name: Nicola
full_name: Gigli, Nicola
last_name: Gigli
- first_name: Jan
full_name: Jan Maas
id: 4C5696CE-F248-11E8-B48F-1D18A9856A87
last_name: Maas
orcid: 0000-0002-0845-1338
citation:
ama: Gigli N, Maas J. Gromov-Hausdorff convergence of discrete transportation metrics.
SIAM Journal on Mathematical Analysis. 2013;45(2):879-899. doi:10.1137/120886315
apa: Gigli, N., & Maas, J. (2013). Gromov-Hausdorff convergence of discrete
transportation metrics. SIAM Journal on Mathematical Analysis. Society
for Industrial and Applied Mathematics . https://doi.org/10.1137/120886315
chicago: Gigli, Nicola, and Jan Maas. “Gromov-Hausdorff Convergence of Discrete
Transportation Metrics.” SIAM Journal on Mathematical Analysis. Society
for Industrial and Applied Mathematics , 2013. https://doi.org/10.1137/120886315 .
ieee: N. Gigli and J. Maas, “Gromov-Hausdorff convergence of discrete transportation
metrics,” SIAM Journal on Mathematical Analysis, vol. 45, no. 2. Society
for Industrial and Applied Mathematics , pp. 879–899, 2013.
ista: Gigli N, Maas J. 2013. Gromov-Hausdorff convergence of discrete transportation
metrics. SIAM Journal on Mathematical Analysis. 45(2), 879–899.
mla: Gigli, Nicola, and Jan Maas. “Gromov-Hausdorff Convergence of Discrete Transportation
Metrics.” SIAM Journal on Mathematical Analysis, vol. 45, no. 2, Society
for Industrial and Applied Mathematics , 2013, pp. 879–99, doi:10.1137/120886315 .
short: N. Gigli, J. Maas, SIAM Journal on Mathematical Analysis 45 (2013) 879–899.
date_created: 2018-12-11T11:55:53Z
date_published: 2013-01-01T00:00:00Z
date_updated: 2021-01-12T06:55:29Z
day: '01'
doi: '10.1137/120886315 '
extern: 1
intvolume: ' 45'
issue: '2'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1207.6501
month: '01'
oa: 1
page: 879 - 899
publication: SIAM Journal on Mathematical Analysis
publication_status: published
publisher: 'Society for Industrial and Applied Mathematics '
publist_id: '4904'
quality_controlled: 0
status: public
title: Gromov-Hausdorff convergence of discrete transportation metrics
type: journal_article
volume: 45
year: '2013'
...
---
_id: '2139'
abstract:
- lang: eng
text: Recently it has been shown that pairs of atoms can form metastable bonds due
to non-conservative forces induced by dissipation [Lemeshko&Weimer, Nature
Comm. 4, 2230 (2013)]. Here we study the dynamics of interaction-induced coherent
population trapping - the process responsible for the formation of dissipatively
bound molecules. We derive the effective dissipative potentials induced between
ultracold atoms by laser light, and study the time evolution of the scattering
states. We demonstrate that binding occurs on short timescales of ~10 microseconds,
even if the initial kinetic energy of the atoms significantly exceeds the depth
of the dissipative potential. Dissipatively-bound molecules with preordained bond
lengths and vibrational wavefunctions can be created and detected in current experiments
with ultracold atoms.
acknowledgement: The work was supported by the NSF through a grant for the Institute
for Theoretical Atomic, Molecular, and Optical Physics at Harvard University and
Smithsonian Astrophysical Observatory
author:
- first_name: Mikhail
full_name: Mikhail Lemeshko
id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
last_name: Lemeshko
orcid: 0000-0002-6990-7802
citation:
ama: Lemeshko M. Manipulating scattering of ultracold atoms with light-induced dissipation.
Frontiers Physics. 2013;1(17). doi:10.3389/fphy.2013.00017
apa: Lemeshko, M. (2013). Manipulating scattering of ultracold atoms with light-induced
dissipation. Frontiers Physics. Frontiers Media. https://doi.org/10.3389/fphy.2013.00017
chicago: Lemeshko, Mikhail. “Manipulating Scattering of Ultracold Atoms with Light-Induced
Dissipation.” Frontiers Physics. Frontiers Media, 2013. https://doi.org/10.3389/fphy.2013.00017.
ieee: M. Lemeshko, “Manipulating scattering of ultracold atoms with light-induced
dissipation,” Frontiers Physics, vol. 1, no. 17. Frontiers Media, 2013.
ista: Lemeshko M. 2013. Manipulating scattering of ultracold atoms with light-induced
dissipation. Frontiers Physics. 1(17).
mla: Lemeshko, Mikhail. “Manipulating Scattering of Ultracold Atoms with Light-Induced
Dissipation.” Frontiers Physics, vol. 1, no. 17, Frontiers Media, 2013,
doi:10.3389/fphy.2013.00017.
short: M. Lemeshko, Frontiers Physics 1 (2013).
date_created: 2018-12-11T11:55:56Z
date_published: 2013-10-07T00:00:00Z
date_updated: 2021-01-12T06:55:32Z
day: '07'
doi: 10.3389/fphy.2013.00017
extern: 1
intvolume: ' 1'
issue: '17'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1307.8129
month: '10'
oa: 1
publication: Frontiers Physics
publication_status: published
publisher: Frontiers Media
publist_id: '4885'
quality_controlled: 0
status: public
title: Manipulating scattering of ultracold atoms with light-induced dissipation
type: journal_article
volume: 1
year: '2013'
...
---
_id: '2181'
abstract:
- lang: eng
text: 'There is a trade-off between performance and correctness in implementing
concurrent data structures. Better performance may be achieved at the expense
of relaxing correctness, by redefining the semantics of data structures. We address
such a redefinition of data structure semantics and present a systematic and formal
framework for obtaining new data structures by quantitatively relaxing existing
ones. We view a data structure as a sequential specification S containing all
"legal" sequences over an alphabet of method calls. Relaxing the data
structure corresponds to defining a distance from any sequence over the alphabet
to the sequential specification: the k-relaxed sequential specification contains
all sequences over the alphabet within distance k from the original specification.
In contrast to other existing work, our relaxations are semantic (distance in
terms of data structure states). As an instantiation of our framework, we present
two simple yet generic relaxation schemes, called out-of-order and stuttering
relaxation, along with several ways of computing distances. We show that the out-of-order
relaxation, when further instantiated to stacks, queues, and priority queues,
amounts to tolerating bounded out-of-order behavior, which cannot be captured
by a purely syntactic relaxation (distance in terms of sequence manipulation,
e.g. edit distance). We give concurrent implementations of relaxed data structures
and demonstrate that bounded relaxations provide the means for trading correctness
for performance in a controlled way. The relaxations are monotonic which further
highlights the trade-off: increasing k increases the number of permitted sequences,
which as we demonstrate can lead to better performance. Finally, since a relaxed
stack or queue also implements a pool, we actually have new concurrent pool implementations
that outperform the state-of-the-art ones.'
acknowledgement: ' and an Elise Richter Fellowship (Austrian Science Fund V00125). '
author:
- first_name: Thomas A
full_name: Henzinger, Thomas A
id: 40876CD8-F248-11E8-B48F-1D18A9856A87
last_name: Henzinger
orcid: 0000−0002−2985−7724
- first_name: Christoph
full_name: Kirsch, Christoph
last_name: Kirsch
- first_name: Hannes
full_name: Payer, Hannes
last_name: Payer
- first_name: Ali
full_name: Sezgin, Ali
id: 4C7638DA-F248-11E8-B48F-1D18A9856A87
last_name: Sezgin
- first_name: Ana
full_name: Sokolova, Ana
last_name: Sokolova
citation:
ama: 'Henzinger TA, Kirsch C, Payer H, Sezgin A, Sokolova A. Quantitative relaxation
of concurrent data structures. In: Proceedings of the 40th Annual ACM SIGPLAN-SIGACT
Symposium on Principles of Programming Language. ACM; 2013:317-328. doi:10.1145/2429069.2429109'
apa: 'Henzinger, T. A., Kirsch, C., Payer, H., Sezgin, A., & Sokolova, A. (2013).
Quantitative relaxation of concurrent data structures. In Proceedings of the
40th annual ACM SIGPLAN-SIGACT symposium on Principles of programming language
(pp. 317–328). Rome, Italy: ACM. https://doi.org/10.1145/2429069.2429109'
chicago: Henzinger, Thomas A, Christoph Kirsch, Hannes Payer, Ali Sezgin, and Ana
Sokolova. “Quantitative Relaxation of Concurrent Data Structures.” In Proceedings
of the 40th Annual ACM SIGPLAN-SIGACT Symposium on Principles of Programming Language,
317–28. ACM, 2013. https://doi.org/10.1145/2429069.2429109.
ieee: T. A. Henzinger, C. Kirsch, H. Payer, A. Sezgin, and A. Sokolova, “Quantitative
relaxation of concurrent data structures,” in Proceedings of the 40th annual
ACM SIGPLAN-SIGACT symposium on Principles of programming language, Rome,
Italy, 2013, pp. 317–328.
ista: 'Henzinger TA, Kirsch C, Payer H, Sezgin A, Sokolova A. 2013. Quantitative
relaxation of concurrent data structures. Proceedings of the 40th annual ACM SIGPLAN-SIGACT
symposium on Principles of programming language. POPL: Principles of Programming
Languages, 317–328.'
mla: Henzinger, Thomas A., et al. “Quantitative Relaxation of Concurrent Data Structures.”
Proceedings of the 40th Annual ACM SIGPLAN-SIGACT Symposium on Principles of
Programming Language, ACM, 2013, pp. 317–28, doi:10.1145/2429069.2429109.
short: T.A. Henzinger, C. Kirsch, H. Payer, A. Sezgin, A. Sokolova, in:, Proceedings
of the 40th Annual ACM SIGPLAN-SIGACT Symposium on Principles of Programming Language,
ACM, 2013, pp. 317–328.
conference:
end_date: 2013-01-25
location: Rome, Italy
name: 'POPL: Principles of Programming Languages'
start_date: 2013-01-23
date_created: 2018-12-11T11:56:11Z
date_published: 2013-01-01T00:00:00Z
date_updated: 2023-02-21T16:06:49Z
day: '01'
ddc:
- '000'
- '004'
department:
- _id: ToHe
doi: 10.1145/2429069.2429109
ec_funded: 1
file:
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checksum: adf465e70948f4e80e48057524516456
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creator: system
date_created: 2018-12-12T10:14:33Z
date_updated: 2020-07-14T12:45:31Z
file_id: '5086'
file_name: IST-2014-198-v1+1_popl128-henzinger-clean.pdf
file_size: 294689
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file_date_updated: 2020-07-14T12:45:31Z
has_accepted_license: '1'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Submitted Version
page: 317 - 328
project:
- _id: 25EE3708-B435-11E9-9278-68D0E5697425
call_identifier: FP7
grant_number: '267989'
name: Quantitative Reactive Modeling
- _id: 25F5A88A-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: S11402-N23
name: Moderne Concurrency Paradigms
publication: Proceedings of the 40th annual ACM SIGPLAN-SIGACT symposium on Principles
of programming language
publication_identifier:
isbn:
- 978-1-4503-1832-7
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publisher: ACM
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title: Quantitative relaxation of concurrent data structures
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2013'
...