---
_id: '118'
abstract:
- lang: eng
  text: While the penetration of objects into granular media is well-studied, there
    is little understanding of how objects settle in gravities, geff, different from
    that of Earth - a scenario potentially relevant to the geomorphology of planets
    and asteroids and also to their exploration using man-made devices. By conducting
    experiments in an accelerating frame, we explore geff ranging from 0.4 g to 1.2
    g. Surprisingly, we find that the rest depth is independent of geff and also that
    the time required for the object to come to rest scales like geff-1/2. With discrete
    element modeling simulations, we reproduce the experimental results and extend
    the range of geff to objects as small as asteroids and as large as Jupiter. Our
    results shed light on the initial stage of sedimentation into dry granular media
    across a range of celestial bodies and also have implications for the design of
    man-made, extraterrestrial vehicles and structures. Key Points The settling depth
    in granular media is independent of gravity The settling time scales like g-1/2
    Layering driven by granular sedimentation should be similar.
acknowledgement: 'The Spanish MINECO project FIS2011-26675, the PIUNA program (U.
  Navarra), and the Project 29942WL (Fonds de Solidarité Prioritaire France-Cuba)
  have partially supported this research. '
author:
- first_name: Ernesto
  full_name: Altshuler, Ernesto
  last_name: Altshuler
- first_name: H
  full_name: Torres, H
  last_name: Torres
- first_name: A
  full_name: González_Pita, A
  last_name: González_Pita
- first_name: Colina G
  full_name: Sánchez, Colina G
  last_name: Sánchez
- first_name: Carlos
  full_name: Pérez Penichet, Carlos
  last_name: Pérez Penichet
- first_name: Scott R
  full_name: Waitukaitis, Scott R
  id: 3A1FFC16-F248-11E8-B48F-1D18A9856A87
  last_name: Waitukaitis
  orcid: 0000-0002-2299-3176
- first_name: Rauól
  full_name: Hidalgo, Rauól
  last_name: Hidalgo
citation:
  ama: Altshuler E, Torres H, González_Pita A, et al. Settling into dry granular media
    in different gravities. <i>Geophysical Research Letters</i>. 2014;41(9):3032-3037.
    doi:<a href="https://doi.org/10.1002/2014GL059229">10.1002/2014GL059229</a>
  apa: Altshuler, E., Torres, H., González_Pita, A., Sánchez, C. G., Pérez Penichet,
    C., Waitukaitis, S. R., &#38; Hidalgo, R. (2014). Settling into dry granular media
    in different gravities. <i>Geophysical Research Letters</i>. Wiley-Blackwell.
    <a href="https://doi.org/10.1002/2014GL059229">https://doi.org/10.1002/2014GL059229</a>
  chicago: Altshuler, Ernesto, H Torres, A González_Pita, Colina G Sánchez, Carlos
    Pérez Penichet, Scott R Waitukaitis, and Rauól Hidalgo. “Settling into Dry Granular
    Media in Different Gravities.” <i>Geophysical Research Letters</i>. Wiley-Blackwell,
    2014. <a href="https://doi.org/10.1002/2014GL059229">https://doi.org/10.1002/2014GL059229</a>.
  ieee: E. Altshuler <i>et al.</i>, “Settling into dry granular media in different
    gravities,” <i>Geophysical Research Letters</i>, vol. 41, no. 9. Wiley-Blackwell,
    pp. 3032–3037, 2014.
  ista: Altshuler E, Torres H, González_Pita A, Sánchez CG, Pérez Penichet C, Waitukaitis
    SR, Hidalgo R. 2014. Settling into dry granular media in different gravities.
    Geophysical Research Letters. 41(9), 3032–3037.
  mla: Altshuler, Ernesto, et al. “Settling into Dry Granular Media in Different Gravities.”
    <i>Geophysical Research Letters</i>, vol. 41, no. 9, Wiley-Blackwell, 2014, pp.
    3032–37, doi:<a href="https://doi.org/10.1002/2014GL059229">10.1002/2014GL059229</a>.
  short: E. Altshuler, H. Torres, A. González_Pita, C.G. Sánchez, C. Pérez Penichet,
    S.R. Waitukaitis, R. Hidalgo, Geophysical Research Letters 41 (2014) 3032–3037.
date_created: 2018-12-11T11:44:43Z
date_published: 2014-05-16T00:00:00Z
date_updated: 2021-01-12T06:48:53Z
day: '16'
doi: 10.1002/2014GL059229
extern: '1'
intvolume: '        41'
issue: '9'
language:
- iso: eng
month: '05'
oa_version: None
page: 3032 - 3037
publication: Geophysical Research Letters
publication_status: published
publisher: Wiley-Blackwell
publist_id: '7936'
quality_controlled: '1'
status: public
title: Settling into dry granular media in different gravities
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 41
year: '2014'
...
---
_id: '11855'
abstract:
- lang: eng
  text: 'The decremental single-source shortest paths (SSSP) problem concerns maintaining
    the distances between a given source node s to every node in an n-node m-edge
    graph G undergoing edge deletions. While its static counterpart can be easily
    solved in near-linear time, this decremental problem is much more challenging
    even in the undirected unweighted case. In this case, the classic O(mn) total
    update time of Even and Shiloach (JACM 1981) has been the fastest known algorithm
    for three decades. With the loss of a (1 + ε)-approximation factor, the running
    time was recently improved to O(n 2+o(1) ) by Bernstein and Roditty (SODA 2011),
    and more recently to O(n 1.8+o(1) + m 1+o(1) ) by Henzinger, Krinninger, and Nanongkai
    (SODA 2014). In this paper, we finally bring the running time of this case down
    to near-linear: We give a (1 + ε)-approximation algorithm with O(m 1+o(1) ) total
    update time, thus obtaining near-linear time. Moreover, we obtain O(m 1+o(1) log
    W) time for the weighted case, where the edge weights are integers from 1 to W.
    The only prior work on weighted graphs in o(mn log W) time is the O(mn 0.986 log
    W)-time algorithm by Henzinger, Krinninger, and Nanongkai (STOC 2014) which works
    for the general weighted directed case. In contrast to the previous results which
    rely on maintaining a sparse emulator, our algorithm relies on maintaining a so-called
    sparse (d, ε)-hop set introduced by Cohen (JACM 2000) in the PRAM literature.
    A (d, ε)-hop set of a graph G = (V, E) is a set E'' of weighted edges such that
    the distance between any pair of nodes in G can be (1 + ε)-approximated by their
    d-hop distance (given by a path containing at most d edges) on G''=(V, E∪E'').
    Our algorithm can maintain an (n o(1) , ε)-hop set of near-linear size in near-linear
    time under edge deletions. It is the first of its kind to the best of our knowledge.
    To maintain the distances on this hop set, we develop a monotone bounded-hop Even-Shiloach
    tree. It results from extending and combining the monotone Even-Shiloach tree
    of Henzinger, Krinninger, and Nanongkai (FOCS 2013) with the bounded-hop SSSP
    technique of Bernstein (STOC 2013). These two new tools might be of independent
    interest.'
article_processing_charge: No
arxiv: 1
author:
- first_name: Monika H
  full_name: Henzinger, Monika H
  id: 540c9bbd-f2de-11ec-812d-d04a5be85630
  last_name: Henzinger
  orcid: 0000-0002-5008-6530
- first_name: Sebastian
  full_name: Krinninger, Sebastian
  last_name: Krinninger
- first_name: Danupon
  full_name: Nanongkai, Danupon
  last_name: Nanongkai
citation:
  ama: 'Henzinger MH, Krinninger S, Nanongkai D. Decremental single-source shortest
    paths on undirected graphs in near-linear total update time. In: <i>55th Annual
    Symposium on Foundations of Computer Science</i>. Institute of Electrical and
    Electronics Engineers; 2014:146-155. doi:<a href="https://doi.org/10.1109/focs.2014.24">10.1109/focs.2014.24</a>'
  apa: 'Henzinger, M. H., Krinninger, S., &#38; Nanongkai, D. (2014). Decremental
    single-source shortest paths on undirected graphs in near-linear total update
    time. In <i>55th Annual Symposium on Foundations of Computer Science</i> (pp.
    146–155). Philadelphia, PA, United States: Institute of Electrical and Electronics
    Engineers. <a href="https://doi.org/10.1109/focs.2014.24">https://doi.org/10.1109/focs.2014.24</a>'
  chicago: Henzinger, Monika H, Sebastian Krinninger, and Danupon Nanongkai. “Decremental
    Single-Source Shortest Paths on Undirected Graphs in near-Linear Total Update
    Time.” In <i>55th Annual Symposium on Foundations of Computer Science</i>, 146–55.
    Institute of Electrical and Electronics Engineers, 2014. <a href="https://doi.org/10.1109/focs.2014.24">https://doi.org/10.1109/focs.2014.24</a>.
  ieee: M. H. Henzinger, S. Krinninger, and D. Nanongkai, “Decremental single-source
    shortest paths on undirected graphs in near-linear total update time,” in <i>55th
    Annual Symposium on Foundations of Computer Science</i>, Philadelphia, PA, United
    States, 2014, pp. 146–155.
  ista: 'Henzinger MH, Krinninger S, Nanongkai D. 2014. Decremental single-source
    shortest paths on undirected graphs in near-linear total update time. 55th Annual
    Symposium on Foundations of Computer Science. FOCS: Annual Symposium on Foundations
    of Computer Science, 146–155.'
  mla: Henzinger, Monika H., et al. “Decremental Single-Source Shortest Paths on Undirected
    Graphs in near-Linear Total Update Time.” <i>55th Annual Symposium on Foundations
    of Computer Science</i>, Institute of Electrical and Electronics Engineers, 2014,
    pp. 146–55, doi:<a href="https://doi.org/10.1109/focs.2014.24">10.1109/focs.2014.24</a>.
  short: M.H. Henzinger, S. Krinninger, D. Nanongkai, in:, 55th Annual Symposium on
    Foundations of Computer Science, Institute of Electrical and Electronics Engineers,
    2014, pp. 146–155.
conference:
  end_date: 2014-10-21
  location: Philadelphia, PA, United States
  name: 'FOCS: Annual Symposium on Foundations of Computer Science'
  start_date: 2014-10-18
date_created: 2022-08-16T08:14:33Z
date_published: 2014-10-01T00:00:00Z
date_updated: 2023-02-21T16:27:34Z
day: '01'
doi: 10.1109/focs.2014.24
extern: '1'
external_id:
  arxiv:
  - '1402.0054'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1402.0054
month: '10'
oa: 1
oa_version: Preprint
page: 146-155
publication: 55th Annual Symposium on Foundations of Computer Science
publication_identifier:
  eisbn:
  - 978-1-4799-6517-5
  issn:
  - 0272-5428
publication_status: published
publisher: Institute of Electrical and Electronics Engineers
quality_controlled: '1'
related_material:
  record:
  - id: '11768'
    relation: later_version
    status: public
scopus_import: '1'
status: public
title: Decremental single-source shortest paths on undirected graphs in near-linear
  total update time
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2014'
...
---
_id: '11870'
abstract:
- lang: eng
  text: "We consider dynamic algorithms for maintaining Single-Source Reachability
    (SSR) and approximate Single-Source Shortest Paths (SSSP) on n-node m-edge directed
    graphs under edge deletions (decremental algorithms). The previous fastest algorithm
    for SSR and SSSP goes back three decades to Even and Shiloach (JACM 1981); it
    has O(1) query time and O(mn) total update time (i.e., linear amortized update
    time if all edges are deleted). This algorithm serves as a building block for
    several other dynamic algorithms. The question whether its total update time can
    be improved is a major, long standing, open problem.\r\n\r\nIn this paper, we
    answer this question affirmatively. We obtain a randomized algorithm which, in
    a simplified form, achieves an Õ(mn0.984) expected total update time for SSR and
    (1 + ε)-approximate SSSP, where Õ(·) hides poly log n. We also extend our algorithm
    to achieve roughly the same running time for Strongly Connected Components (SCC),
    improving the algorithm of Roditty and Zwick (FOCS 2002), and an algorithm that
    improves the Õ (mn log W)-time algorithm of Bernstein (STOC 2013) for approximating
    SSSP on weighted directed graphs, where the edge weights are integers from 1 to
    W. All our algorithms have constant query time in the worst case."
article_number: 674 - 683
article_processing_charge: No
arxiv: 1
author:
- first_name: Monika H
  full_name: Henzinger, Monika H
  id: 540c9bbd-f2de-11ec-812d-d04a5be85630
  last_name: Henzinger
  orcid: 0000-0002-5008-6530
- first_name: Sebastian
  full_name: Krinninger, Sebastian
  last_name: Krinninger
- first_name: Danupon
  full_name: Nanongkai, Danupon
  last_name: Nanongkai
citation:
  ama: 'Henzinger MH, Krinninger S, Nanongkai D. Sublinear-time decremental algorithms
    for single-source reachability and shortest paths on directed graphs. In: <i>46th
    Annual ACM Symposium on Theory of Computing</i>. Association for Computing Machinery;
    2014. doi:<a href="https://doi.org/10.1145/2591796.2591869">10.1145/2591796.2591869</a>'
  apa: 'Henzinger, M. H., Krinninger, S., &#38; Nanongkai, D. (2014). Sublinear-time
    decremental algorithms for single-source reachability and shortest paths on directed
    graphs. In <i>46th Annual ACM Symposium on Theory of Computing</i>. New York,
    NY, United States: Association for Computing Machinery. <a href="https://doi.org/10.1145/2591796.2591869">https://doi.org/10.1145/2591796.2591869</a>'
  chicago: Henzinger, Monika H, Sebastian Krinninger, and Danupon Nanongkai. “Sublinear-Time
    Decremental Algorithms for Single-Source Reachability and Shortest Paths on Directed
    Graphs.” In <i>46th Annual ACM Symposium on Theory of Computing</i>. Association
    for Computing Machinery, 2014. <a href="https://doi.org/10.1145/2591796.2591869">https://doi.org/10.1145/2591796.2591869</a>.
  ieee: M. H. Henzinger, S. Krinninger, and D. Nanongkai, “Sublinear-time decremental
    algorithms for single-source reachability and shortest paths on directed graphs,”
    in <i>46th Annual ACM Symposium on Theory of Computing</i>, New York, NY, United
    States, 2014.
  ista: 'Henzinger MH, Krinninger S, Nanongkai D. 2014. Sublinear-time decremental
    algorithms for single-source reachability and shortest paths on directed graphs.
    46th Annual ACM Symposium on Theory of Computing. STOC: Symposium on Theory of
    Computing, 674–683.'
  mla: Henzinger, Monika H., et al. “Sublinear-Time Decremental Algorithms for Single-Source
    Reachability and Shortest Paths on Directed Graphs.” <i>46th Annual ACM Symposium
    on Theory of Computing</i>, 674–683, Association for Computing Machinery, 2014,
    doi:<a href="https://doi.org/10.1145/2591796.2591869">10.1145/2591796.2591869</a>.
  short: M.H. Henzinger, S. Krinninger, D. Nanongkai, in:, 46th Annual ACM Symposium
    on Theory of Computing, Association for Computing Machinery, 2014.
conference:
  end_date: 2014-06-03
  location: New York, NY, United States
  name: 'STOC: Symposium on Theory of Computing'
  start_date: 2014-05-31
date_created: 2022-08-16T09:41:57Z
date_published: 2014-05-01T00:00:00Z
date_updated: 2023-02-17T11:18:52Z
day: '01'
doi: 10.1145/2591796.2591869
extern: '1'
external_id:
  arxiv:
  - '1504.07959'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1504.07959
month: '05'
oa: 1
oa_version: Preprint
publication: 46th Annual ACM Symposium on Theory of Computing
publication_identifier:
  isbn:
  - 978-145032710-7
  issn:
  - 0737-8017
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
scopus_import: '1'
status: public
title: Sublinear-time decremental algorithms for single-source reachability and shortest
  paths on directed graphs
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2014'
...
---
_id: '11875'
abstract:
- lang: eng
  text: We present the first deterministic data structures for maintaining approximate
    minimum vertex cover and maximum matching in a fully dynamic graph in  time per
    update. In particular, for minimum vertex cover we provide deterministic data
    structures for maintaining a (2 + ε) approximation in O(log n/ε2) amortized time
    per update. For maximum matching, we show how to maintain a (3 + e) approximation
    in O(m1/3/ε2) amortized time per update, and a (4 + ε) approximation in O(m1/3/ε2)
    worst-case time per update. Our data structure for fully dynamic minimum vertex
    cover is essentially near-optimal and settles an open problem by Onak and Rubinfeld
    [13].
article_processing_charge: No
arxiv: 1
author:
- first_name: Sayan
  full_name: Bhattacharya, Sayan
  last_name: Bhattacharya
- first_name: Monika H
  full_name: Henzinger, Monika H
  id: 540c9bbd-f2de-11ec-812d-d04a5be85630
  last_name: Henzinger
  orcid: 0000-0002-5008-6530
- first_name: Giuseppe F.
  full_name: Italiano, Giuseppe F.
  last_name: Italiano
citation:
  ama: 'Bhattacharya S, Henzinger MH, Italiano GF. Deterministic fully dynamic data
    structures for vertex cover and matching. In: <i>26th Annual ACM-SIAM Symposium
    on Discrete Algorithms</i>. Society for Industrial and Applied Mathematics; 2014:785-804.
    doi:<a href="https://doi.org/10.1137/1.9781611973730.54">10.1137/1.9781611973730.54</a>'
  apa: 'Bhattacharya, S., Henzinger, M. H., &#38; Italiano, G. F. (2014). Deterministic
    fully dynamic data structures for vertex cover and matching. In <i>26th Annual
    ACM-SIAM Symposium on Discrete Algorithms</i> (pp. 785–804). San Diego, CA, United
    States: Society for Industrial and Applied Mathematics. <a href="https://doi.org/10.1137/1.9781611973730.54">https://doi.org/10.1137/1.9781611973730.54</a>'
  chicago: Bhattacharya, Sayan, Monika H Henzinger, and Giuseppe F. Italiano. “Deterministic
    Fully Dynamic Data Structures for Vertex Cover and Matching.” In <i>26th Annual
    ACM-SIAM Symposium on Discrete Algorithms</i>, 785–804. Society for Industrial
    and Applied Mathematics, 2014. <a href="https://doi.org/10.1137/1.9781611973730.54">https://doi.org/10.1137/1.9781611973730.54</a>.
  ieee: S. Bhattacharya, M. H. Henzinger, and G. F. Italiano, “Deterministic fully
    dynamic data structures for vertex cover and matching,” in <i>26th Annual ACM-SIAM
    Symposium on Discrete Algorithms</i>, San Diego, CA, United States, 2014, pp.
    785–804.
  ista: 'Bhattacharya S, Henzinger MH, Italiano GF. 2014. Deterministic fully dynamic
    data structures for vertex cover and matching. 26th Annual ACM-SIAM Symposium
    on Discrete Algorithms. SODA: Symposium on Discrete Algorithms, 785–804.'
  mla: Bhattacharya, Sayan, et al. “Deterministic Fully Dynamic Data Structures for
    Vertex Cover and Matching.” <i>26th Annual ACM-SIAM Symposium on Discrete Algorithms</i>,
    Society for Industrial and Applied Mathematics, 2014, pp. 785–804, doi:<a href="https://doi.org/10.1137/1.9781611973730.54">10.1137/1.9781611973730.54</a>.
  short: S. Bhattacharya, M.H. Henzinger, G.F. Italiano, in:, 26th Annual ACM-SIAM
    Symposium on Discrete Algorithms, Society for Industrial and Applied Mathematics,
    2014, pp. 785–804.
conference:
  end_date: 2015-01-06
  location: San Diego, CA, United States
  name: 'SODA: Symposium on Discrete Algorithms'
  start_date: 2015-01-04
date_created: 2022-08-16T12:36:42Z
date_published: 2014-01-01T00:00:00Z
date_updated: 2023-02-21T16:32:06Z
day: '01'
doi: 10.1137/1.9781611973730.54
extern: '1'
external_id:
  arxiv:
  - '1412.1318'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1412.1318
month: '01'
oa: 1
oa_version: Preprint
page: 785-804
publication: 26th Annual ACM-SIAM Symposium on Discrete Algorithms
publication_identifier:
  eisbn:
  - 978-1-61197-373-0
  isbn:
  - 978-1-61197-374-7
publication_status: published
publisher: Society for Industrial and Applied Mathematics
quality_controlled: '1'
related_material:
  record:
  - id: '11890'
    relation: later_version
    status: public
scopus_import: '1'
status: public
title: Deterministic fully dynamic data structures for vertex cover and matching
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2014'
...
---
_id: '11876'
abstract:
- lang: eng
  text: "We study dynamic (1 + ∊)-approximation algorithms for the single-source shortest
    paths problem in an unweighted undirected n-node m-edge graph under edge deletions.
    The fastest algorithm for this problem is an algorithm with O(n2+o(1)) total update
    time and constant query time by Bernstein and Roditty (SODA 2011). In this paper,
    we improve the total update time to O(n1.8+o(1) + m1+o(1)) while keeping the query
    time constant. This running time is essentially tight when m = Ω(n1.8) since we
    need Ω(m) time even in the static setting. For smaller values of m, the running
    time of our algorithm is subquadratic, and is the first that breaks through the
    quadratic time barrier.\r\n\r\nIn obtaining this result, we develop a fast algorithm
    for what we call center cover data structure. We also make non-trivial extensions
    to our previous techniques called lazy-update and monotone Even-Shiloach trees
    (ICALP 2013 and FOCS 2013). As by-products of our new techniques, we obtain two
    new results for the decremental all-pairs shortest-paths problem. Our first result
    is the first approximation algorithm whose total update time is faster than Õ(mn)
    for all values of m. Our second result is a new trade-off between the total update
    time and the additive approximation guarantee."
article_processing_charge: No
author:
- first_name: Monika H
  full_name: Henzinger, Monika H
  id: 540c9bbd-f2de-11ec-812d-d04a5be85630
  last_name: Henzinger
  orcid: 0000-0002-5008-6530
- first_name: Sebastian
  full_name: Krinninger, Sebastian
  last_name: Krinninger
- first_name: Danupon
  full_name: Nanongkai, Danupon
  last_name: Nanongkai
citation:
  ama: 'Henzinger MH, Krinninger S, Nanongkai D. A subquadratic-time algorithm for
    decremental single-source shortest paths. In: <i>25th Annual ACM-SIAM Symposium
    on Discrete Algorithms</i>. Society for Industrial and Applied Mathematics; 2014:1053-1072.
    doi:<a href="https://doi.org/10.1137/1.9781611973402.79">10.1137/1.9781611973402.79</a>'
  apa: 'Henzinger, M. H., Krinninger, S., &#38; Nanongkai, D. (2014). A subquadratic-time
    algorithm for decremental single-source shortest paths. In <i>25th Annual ACM-SIAM
    Symposium on Discrete Algorithms</i> (pp. 1053–1072). Portland, OR, United States:
    Society for Industrial and Applied Mathematics. <a href="https://doi.org/10.1137/1.9781611973402.79">https://doi.org/10.1137/1.9781611973402.79</a>'
  chicago: Henzinger, Monika H, Sebastian Krinninger, and Danupon Nanongkai. “A Subquadratic-Time
    Algorithm for Decremental Single-Source Shortest Paths.” In <i>25th Annual ACM-SIAM
    Symposium on Discrete Algorithms</i>, 1053–72. Society for Industrial and Applied
    Mathematics, 2014. <a href="https://doi.org/10.1137/1.9781611973402.79">https://doi.org/10.1137/1.9781611973402.79</a>.
  ieee: M. H. Henzinger, S. Krinninger, and D. Nanongkai, “A subquadratic-time algorithm
    for decremental single-source shortest paths,” in <i>25th Annual ACM-SIAM Symposium
    on Discrete Algorithms</i>, Portland, OR, United States, 2014, pp. 1053–1072.
  ista: 'Henzinger MH, Krinninger S, Nanongkai D. 2014. A subquadratic-time algorithm
    for decremental single-source shortest paths. 25th Annual ACM-SIAM Symposium on
    Discrete Algorithms. SODA: Symposium on Discrete Algorithms, 1053–1072.'
  mla: Henzinger, Monika H., et al. “A Subquadratic-Time Algorithm for Decremental
    Single-Source Shortest Paths.” <i>25th Annual ACM-SIAM Symposium on Discrete Algorithms</i>,
    Society for Industrial and Applied Mathematics, 2014, pp. 1053–72, doi:<a href="https://doi.org/10.1137/1.9781611973402.79">10.1137/1.9781611973402.79</a>.
  short: M.H. Henzinger, S. Krinninger, D. Nanongkai, in:, 25th Annual ACM-SIAM Symposium
    on Discrete Algorithms, Society for Industrial and Applied Mathematics, 2014,
    pp. 1053–1072.
conference:
  end_date: 2014-01-07
  location: Portland, OR, United States
  name: 'SODA: Symposium on Discrete Algorithms'
  start_date: 2014-01-05
date_created: 2022-08-16T12:58:31Z
date_published: 2014-01-01T00:00:00Z
date_updated: 2023-02-17T11:58:42Z
day: '01'
doi: 10.1137/1.9781611973402.79
extern: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1137/1.9781611973402.79
month: '01'
oa: 1
oa_version: Published Version
page: 1053-1072
publication: 25th Annual ACM-SIAM Symposium on Discrete Algorithms
publication_identifier:
  eisbn:
  - 978-1-61197-340-2
  isbn:
  - 978-1-61197-338-9
publication_status: published
publisher: Society for Industrial and Applied Mathematics
quality_controlled: '1'
scopus_import: '1'
status: public
title: A subquadratic-time algorithm for decremental single-source shortest paths
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2014'
...
---
_id: '119'
abstract:
- lang: eng
  text: Observations of flowing granular matter have suggested that same-material
    tribocharging depends on particle size, typically rendering large grains positive
    and small ones negative. Models assuming the transfer of trapped electrons can
    account for this trend, but have not been validated. Tracking individual grains
    in an electric field, we show quantitatively that charge is transferred based
    on size between materially identical grains. However, the surface density of trapped
    electrons, measured independently by thermoluminescence techniques, is orders
    of magnitude too small to account for the scale of charge transferred. This reveals
    that trapped electrons are not a necessary ingredient for same-material tribocharging.
acknowledgement: This work was supported by the NSF through DMR-1309611. Access to
  the shared experimental facilities provided by the NSF-supported Chicago MRSEC (DMR-0820054)
  is gratefully acknowledged. S. L. F. and J. L. P. acknowledge funding from UIC NSF
  Grants No. 0850830 and No. 0602308. S. R. W. acknowledges support from a University
  of Chicago Millikan Fellowship and from Mrs. Joan Winstein through the Winstein
  Prize for Instrumentation.
article_number: '218001'
arxiv: 1
author:
- first_name: Scott R
  full_name: Waitukaitis, Scott R
  id: 3A1FFC16-F248-11E8-B48F-1D18A9856A87
  last_name: Waitukaitis
  orcid: 0000-0002-2299-3176
- first_name: Victor
  full_name: Lee, Victor
  last_name: Lee
- first_name: James
  full_name: Pierson, James
  last_name: Pierson
- first_name: Steven
  full_name: Forman, Steven
  last_name: Forman
- first_name: Heinrich
  full_name: Jaeger, Heinrich
  last_name: Jaeger
citation:
  ama: Waitukaitis SR, Lee V, Pierson J, Forman S, Jaeger H. Size-dependent same-material
    tribocharging in insulating grains. <i>APS Physics, Physical Review Letters</i>.
    2014;112(21). doi:<a href="https://doi.org/10.1103/PhysRevLett.112.218001">10.1103/PhysRevLett.112.218001</a>
  apa: Waitukaitis, S. R., Lee, V., Pierson, J., Forman, S., &#38; Jaeger, H. (2014).
    Size-dependent same-material tribocharging in insulating grains. <i>APS Physics,
    Physical Review Letters</i>. American Physical Society. <a href="https://doi.org/10.1103/PhysRevLett.112.218001">https://doi.org/10.1103/PhysRevLett.112.218001</a>
  chicago: Waitukaitis, Scott R, Victor Lee, James Pierson, Steven Forman, and Heinrich
    Jaeger. “Size-Dependent Same-Material Tribocharging in Insulating Grains.” <i>APS
    Physics, Physical Review Letters</i>. American Physical Society, 2014. <a href="https://doi.org/10.1103/PhysRevLett.112.218001">https://doi.org/10.1103/PhysRevLett.112.218001</a>.
  ieee: S. R. Waitukaitis, V. Lee, J. Pierson, S. Forman, and H. Jaeger, “Size-dependent
    same-material tribocharging in insulating grains,” <i>APS Physics, Physical Review
    Letters</i>, vol. 112, no. 21. American Physical Society, 2014.
  ista: Waitukaitis SR, Lee V, Pierson J, Forman S, Jaeger H. 2014. Size-dependent
    same-material tribocharging in insulating grains. APS Physics, Physical Review
    Letters. 112(21), 218001.
  mla: Waitukaitis, Scott R., et al. “Size-Dependent Same-Material Tribocharging in
    Insulating Grains.” <i>APS Physics, Physical Review Letters</i>, vol. 112, no.
    21, 218001, American Physical Society, 2014, doi:<a href="https://doi.org/10.1103/PhysRevLett.112.218001">10.1103/PhysRevLett.112.218001</a>.
  short: S.R. Waitukaitis, V. Lee, J. Pierson, S. Forman, H. Jaeger, APS Physics,
    Physical Review Letters 112 (2014).
date_created: 2018-12-11T11:44:44Z
date_published: 2014-05-30T00:00:00Z
date_updated: 2021-01-12T06:48:58Z
day: '30'
doi: 10.1103/PhysRevLett.112.218001
extern: '1'
external_id:
  arxiv:
  - '1309.2578'
intvolume: '       112'
issue: '21'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1309.2578
month: '05'
oa: 1
oa_version: Submitted Version
publication: APS Physics, Physical Review Letters
publication_status: published
publisher: American Physical Society
publist_id: '7935'
quality_controlled: '1'
status: public
title: Size-dependent same-material tribocharging in insulating grains
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 112
year: '2014'
...
---
_id: '11967'
abstract:
- lang: eng
  text: An experimentally easy to perform method for the generation of alumina-supported
    Fe3O4 nanoparticles [(6±1) nm size, 0.67 wt %]and the use of this material in
    hydrazine-mediated heterogeneously catalyzed reductions of nitroarenes to anilines
    under batch and continuous-flow conditions is presented. The bench-stable, reusable
    nano-Fe3O4@Al2O3 catalyst can selectively reduce functionalized nitroarenes at
    1 mol % catalyst loading by using a 20 mol % excess of hydrazine hydrate in an
    elevated temperature regime (150 °C, reaction time 2–6 min in batch). For continuous-flow
    processing, the catalyst material is packed into dedicated cartridges and used
    in a commercially available high-temperature/-pressure flow device. In continuous
    mode, reaction times can be reduced to less than 1 min at 150 °C (30 bar back
    pressure) in a highly intensified process. The nano-Fe3O4@Al2O3 catalyst demonstrated
    stable reduction of nitrobenzene (0.5 M in MeOH) for more than 10 h on stream
    at a productivity of 30 mmol h−1 (0.72 mol per day). Importantly, virtually no
    leaching of the catalytically active material could be observed by inductively
    coupled plasma MS monitoring.
article_processing_charge: No
article_type: original
author:
- first_name: Mojtaba Mirhosseini
  full_name: Moghaddam, Mojtaba Mirhosseini
  last_name: Moghaddam
- first_name: Bartholomäus
  full_name: Pieber, Bartholomäus
  id: 93e5e5b2-0da6-11ed-8a41-af589a024726
  last_name: Pieber
  orcid: 0000-0001-8689-388X
- first_name: Toma
  full_name: Glasnov, Toma
  last_name: Glasnov
- first_name: C. Oliver
  full_name: Kappe, C. Oliver
  last_name: Kappe
citation:
  ama: Moghaddam MM, Pieber B, Glasnov T, Kappe CO. Immobilized iron oxide nanoparticles
    as stable and reusable catalysts for hydrazine-mediated nitro reductions in continuous
    flow. <i>ChemSusChem</i>. 2014;7(11):3122-3131. doi:<a href="https://doi.org/10.1002/cssc.201402455">10.1002/cssc.201402455</a>
  apa: Moghaddam, M. M., Pieber, B., Glasnov, T., &#38; Kappe, C. O. (2014). Immobilized
    iron oxide nanoparticles as stable and reusable catalysts for hydrazine-mediated
    nitro reductions in continuous flow. <i>ChemSusChem</i>. Wiley. <a href="https://doi.org/10.1002/cssc.201402455">https://doi.org/10.1002/cssc.201402455</a>
  chicago: Moghaddam, Mojtaba Mirhosseini, Bartholomäus Pieber, Toma Glasnov, and
    C. Oliver Kappe. “Immobilized Iron Oxide Nanoparticles as Stable and Reusable
    Catalysts for Hydrazine-Mediated Nitro Reductions in Continuous Flow.” <i>ChemSusChem</i>.
    Wiley, 2014. <a href="https://doi.org/10.1002/cssc.201402455">https://doi.org/10.1002/cssc.201402455</a>.
  ieee: M. M. Moghaddam, B. Pieber, T. Glasnov, and C. O. Kappe, “Immobilized iron
    oxide nanoparticles as stable and reusable catalysts for hydrazine-mediated nitro
    reductions in continuous flow,” <i>ChemSusChem</i>, vol. 7, no. 11. Wiley, pp.
    3122–3131, 2014.
  ista: Moghaddam MM, Pieber B, Glasnov T, Kappe CO. 2014. Immobilized iron oxide
    nanoparticles as stable and reusable catalysts for hydrazine-mediated nitro reductions
    in continuous flow. ChemSusChem. 7(11), 3122–3131.
  mla: Moghaddam, Mojtaba Mirhosseini, et al. “Immobilized Iron Oxide Nanoparticles
    as Stable and Reusable Catalysts for Hydrazine-Mediated Nitro Reductions in Continuous
    Flow.” <i>ChemSusChem</i>, vol. 7, no. 11, Wiley, 2014, pp. 3122–31, doi:<a href="https://doi.org/10.1002/cssc.201402455">10.1002/cssc.201402455</a>.
  short: M.M. Moghaddam, B. Pieber, T. Glasnov, C.O. Kappe, ChemSusChem 7 (2014) 3122–3131.
date_created: 2022-08-25T08:36:54Z
date_published: 2014-11-01T00:00:00Z
date_updated: 2023-02-21T10:09:42Z
day: '01'
doi: 10.1002/cssc.201402455
extern: '1'
external_id:
  pmid:
  - '25209099'
intvolume: '         7'
issue: '11'
language:
- iso: eng
month: '11'
oa_version: None
page: 3122-3131
pmid: 1
publication: ChemSusChem
publication_identifier:
  eissn:
  - 1864-564X
  issn:
  - 1864-5631
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: Immobilized iron oxide nanoparticles as stable and reusable catalysts for hydrazine-mediated
  nitro reductions in continuous flow
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 7
year: '2014'
...
---
_id: '11968'
abstract:
- lang: eng
  text: 'Membrane phospholipids typically contain fatty acids (FAs) of 16 and 18 carbon
    atoms. This particular chain length is evolutionarily highly conserved and presumably
    provides maximum stability and dynamic properties to biological membranes in response
    to nutritional or environmental cues. Here, we show that the relative proportion
    of C16 versus C18 FAs is regulated by the activity of acetyl-CoA carboxylase (Acc1),
    the first and rate-limiting enzyme of FA de novo synthesis. Acc1 activity is attenuated
    by AMPK/Snf1-dependent phosphorylation, which is required to maintain an appropriate
    acyl-chain length distribution. Moreover, we find that the transcriptional repressor
    Opi1 preferentially binds to C16 over C18 phosphatidic acid (PA) species: thus,
    C16-chain containing PA sequesters Opi1 more effectively to the ER, enabling AMPK/Snf1
    control of PA acyl-chain length to determine the degree of derepression of Opi1
    target genes. These findings reveal an unexpected regulatory link between the
    major energy-sensing kinase, membrane lipid composition, and transcription.'
article_processing_charge: No
article_type: original
author:
- first_name: Harald F.
  full_name: Hofbauer, Harald F.
  last_name: Hofbauer
- first_name: Florian H.
  full_name: Schopf, Florian H.
  last_name: Schopf
- first_name: Hannes
  full_name: Schleifer, Hannes
  last_name: Schleifer
- first_name: Oskar L.
  full_name: Knittelfelder, Oskar L.
  last_name: Knittelfelder
- first_name: Bartholomäus
  full_name: Pieber, Bartholomäus
  id: 93e5e5b2-0da6-11ed-8a41-af589a024726
  last_name: Pieber
  orcid: 0000-0001-8689-388X
- first_name: Gerald N.
  full_name: Rechberger, Gerald N.
  last_name: Rechberger
- first_name: Heimo
  full_name: Wolinski, Heimo
  last_name: Wolinski
- first_name: Maria L.
  full_name: Gaspar, Maria L.
  last_name: Gaspar
- first_name: C. Oliver
  full_name: Kappe, C. Oliver
  last_name: Kappe
- first_name: Johannes
  full_name: Stadlmann, Johannes
  last_name: Stadlmann
- first_name: Karl
  full_name: Mechtler, Karl
  last_name: Mechtler
- first_name: Alexandra
  full_name: Zenz, Alexandra
  last_name: Zenz
- first_name: Karl
  full_name: Lohner, Karl
  last_name: Lohner
- first_name: Oksana
  full_name: Tehlivets, Oksana
  last_name: Tehlivets
- first_name: Susan A.
  full_name: Henry, Susan A.
  last_name: Henry
- first_name: Sepp D.
  full_name: Kohlwein, Sepp D.
  last_name: Kohlwein
citation:
  ama: Hofbauer HF, Schopf FH, Schleifer H, et al. Regulation of gene expression through
    a transcriptional repressor that senses acyl-chain length in membrane phospholipids.
    <i>Developmental Cell</i>. 2014;29(6):P729-739. doi:<a href="https://doi.org/10.1016/j.devcel.2014.04.025">10.1016/j.devcel.2014.04.025</a>
  apa: Hofbauer, H. F., Schopf, F. H., Schleifer, H., Knittelfelder, O. L., Pieber,
    B., Rechberger, G. N., … Kohlwein, S. D. (2014). Regulation of gene expression
    through a transcriptional repressor that senses acyl-chain length in membrane
    phospholipids. <i>Developmental Cell</i>. Elsevier. <a href="https://doi.org/10.1016/j.devcel.2014.04.025">https://doi.org/10.1016/j.devcel.2014.04.025</a>
  chicago: Hofbauer, Harald F., Florian H. Schopf, Hannes Schleifer, Oskar L. Knittelfelder,
    Bartholomäus Pieber, Gerald N. Rechberger, Heimo Wolinski, et al. “Regulation
    of Gene Expression through a Transcriptional Repressor That Senses Acyl-Chain
    Length in Membrane Phospholipids.” <i>Developmental Cell</i>. Elsevier, 2014.
    <a href="https://doi.org/10.1016/j.devcel.2014.04.025">https://doi.org/10.1016/j.devcel.2014.04.025</a>.
  ieee: H. F. Hofbauer <i>et al.</i>, “Regulation of gene expression through a transcriptional
    repressor that senses acyl-chain length in membrane phospholipids,” <i>Developmental
    Cell</i>, vol. 29, no. 6. Elsevier, pp. P729-739, 2014.
  ista: Hofbauer HF, Schopf FH, Schleifer H, Knittelfelder OL, Pieber B, Rechberger
    GN, Wolinski H, Gaspar ML, Kappe CO, Stadlmann J, Mechtler K, Zenz A, Lohner K,
    Tehlivets O, Henry SA, Kohlwein SD. 2014. Regulation of gene expression through
    a transcriptional repressor that senses acyl-chain length in membrane phospholipids.
    Developmental Cell. 29(6), P729-739.
  mla: Hofbauer, Harald F., et al. “Regulation of Gene Expression through a Transcriptional
    Repressor That Senses Acyl-Chain Length in Membrane Phospholipids.” <i>Developmental
    Cell</i>, vol. 29, no. 6, Elsevier, 2014, pp. P729-739, doi:<a href="https://doi.org/10.1016/j.devcel.2014.04.025">10.1016/j.devcel.2014.04.025</a>.
  short: H.F. Hofbauer, F.H. Schopf, H. Schleifer, O.L. Knittelfelder, B. Pieber,
    G.N. Rechberger, H. Wolinski, M.L. Gaspar, C.O. Kappe, J. Stadlmann, K. Mechtler,
    A. Zenz, K. Lohner, O. Tehlivets, S.A. Henry, S.D. Kohlwein, Developmental Cell
    29 (2014) P729-739.
date_created: 2022-08-25T08:42:42Z
date_published: 2014-06-23T00:00:00Z
date_updated: 2023-02-21T10:09:45Z
day: '23'
doi: 10.1016/j.devcel.2014.04.025
extern: '1'
external_id:
  pmid:
  - '24960695'
intvolume: '        29'
issue: '6'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1016/j.devcel.2014.04.025
month: '06'
oa: 1
oa_version: Published Version
page: P729-739
pmid: 1
publication: Developmental Cell
publication_identifier:
  eissn:
  - 1878-1551
  issn:
  - 1534-5807
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Regulation of gene expression through a transcriptional repressor that senses
  acyl-chain length in membrane phospholipids
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 29
year: '2014'
...
---
_id: '11987'
abstract:
- lang: eng
  text: A method for the direct lithiation of terminal alkynes and heterocycles with
    subsequent carboxylation in a continuous flow format was developed. This method
    provides carboxylic acids at ambient conditions within less than five seconds
    with only little excess of the organometallic base and CO2.
article_number: '13430'
article_processing_charge: No
article_type: letter_note
author:
- first_name: Bartholomäus
  full_name: Pieber, Bartholomäus
  id: 93e5e5b2-0da6-11ed-8a41-af589a024726
  last_name: Pieber
  orcid: 0000-0001-8689-388X
- first_name: Toma
  full_name: Glasnov, Toma
  last_name: Glasnov
- first_name: C. O.
  full_name: Kappe, C. O.
  last_name: Kappe
citation:
  ama: 'Pieber B, Glasnov T, Kappe CO. Flash carboxylation: Fast lithiation–carboxylation
    sequence at room temperature in continuous flow. <i>RSC Advances</i>. 2014;4(26).
    doi:<a href="https://doi.org/10.1039/c4ra01442a">10.1039/c4ra01442a</a>'
  apa: 'Pieber, B., Glasnov, T., &#38; Kappe, C. O. (2014). Flash carboxylation: Fast
    lithiation–carboxylation sequence at room temperature in continuous flow. <i>RSC
    Advances</i>. Royal Society of Chemistry. <a href="https://doi.org/10.1039/c4ra01442a">https://doi.org/10.1039/c4ra01442a</a>'
  chicago: 'Pieber, Bartholomäus, Toma Glasnov, and C. O. Kappe. “Flash Carboxylation:
    Fast Lithiation–Carboxylation Sequence at Room Temperature in Continuous Flow.”
    <i>RSC Advances</i>. Royal Society of Chemistry, 2014. <a href="https://doi.org/10.1039/c4ra01442a">https://doi.org/10.1039/c4ra01442a</a>.'
  ieee: 'B. Pieber, T. Glasnov, and C. O. Kappe, “Flash carboxylation: Fast lithiation–carboxylation
    sequence at room temperature in continuous flow,” <i>RSC Advances</i>, vol. 4,
    no. 26. Royal Society of Chemistry, 2014.'
  ista: 'Pieber B, Glasnov T, Kappe CO. 2014. Flash carboxylation: Fast lithiation–carboxylation
    sequence at room temperature in continuous flow. RSC Advances. 4(26), 13430.'
  mla: 'Pieber, Bartholomäus, et al. “Flash Carboxylation: Fast Lithiation–Carboxylation
    Sequence at Room Temperature in Continuous Flow.” <i>RSC Advances</i>, vol. 4,
    no. 26, 13430, Royal Society of Chemistry, 2014, doi:<a href="https://doi.org/10.1039/c4ra01442a">10.1039/c4ra01442a</a>.'
  short: B. Pieber, T. Glasnov, C.O. Kappe, RSC Advances 4 (2014).
date_created: 2022-08-25T11:48:19Z
date_published: 2014-03-03T00:00:00Z
date_updated: 2023-02-21T10:10:31Z
day: '03'
doi: 10.1039/c4ra01442a
extern: '1'
intvolume: '         4'
issue: '26'
language:
- iso: eng
month: '03'
oa_version: None
publication: RSC Advances
publication_identifier:
  eissn:
  - 2046-2069
publication_status: published
publisher: Royal Society of Chemistry
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Flash carboxylation: Fast lithiation–carboxylation sequence at room temperature
  in continuous flow'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 4
year: '2014'
...
---
_id: '2080'
abstract:
- lang: eng
  text: 'Spinning tops and yo-yos have long fascinated cultures around the world with
    their unexpected, graceful motions that seemingly elude gravity. We present an
    algorithm to generate designs for spinning objects by optimizing rotational dynamics
    properties. As input, the user provides a solid 3D model and a desired axis of
    rotation. Our approach then modifies the mass distribution such that the principal
    directions of the moment of inertia align with the target rotation frame. We augment
    the model by creating voids inside its volume, with interior fill represented
    by an adaptive multi-resolution vox-elization. The discrete voxel fill values
    are optimized using a continuous, nonlinear formulation. Further, we optimize
    for rotational stability by maximizing the dominant principal moment. We extend
    our technique to incorporate deformation and multiple materials for cases where
    internal voids alone are insufficient. Our method is well-suited for a variety
    of 3D printed models, ranging from characters to abstract shapes. We demonstrate
    tops and yo-yos that spin surprisingly stably despite their asymmetric appearance. '
acknowledgement: This project was supported in part by the ERC Starting Grant iModel
  (StG-2012-306877). Emily Whiting is supported by the ETH Zurich / Marie Curie COFUND
  Postdoctoral Fellowship.
author:
- first_name: Moritz
  full_name: Bac̈her, Moritz
  last_name: Bac̈Her
- first_name: Emily
  full_name: Whiting, Emily
  last_name: Whiting
- first_name: Bernd
  full_name: Bernd Bickel
  id: 49876194-F248-11E8-B48F-1D18A9856A87
  last_name: Bickel
  orcid: 0000-0001-6511-9385
- first_name: Olga
  full_name: Sorkine-Hornung, Olga
  last_name: Sorkine Hornung
citation:
  ama: 'Bac̈Her M, Whiting E, Bickel B, Sorkine Hornung O. Spin-It: Optimizing moment
    of inertia for spinnable objects. In: Vol 33. ACM; 2014. doi:<a href="https://doi.org/10.1145/2601097.2601157">10.1145/2601097.2601157</a>'
  apa: 'Bac̈Her, M., Whiting, E., Bickel, B., &#38; Sorkine Hornung, O. (2014). Spin-It:
    Optimizing moment of inertia for spinnable objects (Vol. 33). Presented at the
    SIGGRAPH: 41st International Conference and Exhibition on Computer Graphics and
    Interactive Techniques, ACM. <a href="https://doi.org/10.1145/2601097.2601157">https://doi.org/10.1145/2601097.2601157</a>'
  chicago: 'Bac̈Her, Moritz, Emily Whiting, Bernd Bickel, and Olga Sorkine Hornung.
    “Spin-It: Optimizing Moment of Inertia for Spinnable Objects,” Vol. 33. ACM, 2014.
    <a href="https://doi.org/10.1145/2601097.2601157">https://doi.org/10.1145/2601097.2601157</a>.'
  ieee: 'M. Bac̈Her, E. Whiting, B. Bickel, and O. Sorkine Hornung, “Spin-It: Optimizing
    moment of inertia for spinnable objects,” presented at the SIGGRAPH: 41st International
    Conference and Exhibition on Computer Graphics and Interactive Techniques, 2014,
    vol. 33, no. 4.'
  ista: 'Bac̈Her M, Whiting E, Bickel B, Sorkine Hornung O. 2014. Spin-It: Optimizing
    moment of inertia for spinnable objects. SIGGRAPH: 41st International Conference
    and Exhibition on Computer Graphics and Interactive Techniques vol. 33.'
  mla: 'Bac̈Her, Moritz, et al. <i>Spin-It: Optimizing Moment of Inertia for Spinnable
    Objects</i>. Vol. 33, no. 4, ACM, 2014, doi:<a href="https://doi.org/10.1145/2601097.2601157">10.1145/2601097.2601157</a>.'
  short: M. Bac̈Her, E. Whiting, B. Bickel, O. Sorkine Hornung, in:, ACM, 2014.
conference:
  name: 'SIGGRAPH: 41st International Conference and Exhibition on Computer Graphics
    and Interactive Techniques'
date_created: 2018-12-11T11:55:35Z
date_published: 2014-01-01T00:00:00Z
date_updated: 2019-04-26T07:22:07Z
day: '01'
doi: 10.1145/2601097.2601157
extern: 1
intvolume: '        33'
issue: '4'
month: '01'
publication_status: published
publisher: ACM
publist_id: '4958'
quality_controlled: 0
status: public
title: 'Spin-It: Optimizing moment of inertia for spinnable objects'
type: conference
volume: 33
year: '2014'
...
---
_id: '2081'
abstract:
- lang: eng
  text: We propose an interactive, optimization-in-the-loop tool for designing inflatable
    structures. Given a target shape, the user draws a network of seams defining desired
    segment boundaries in 3D. Our method computes optimally-shaped flat panels for
    the segments, such that the inflated structure is as close as possible to the
    target while satisfying the desired seam positions. Our approach is underpinned
    by physics-based pattern optimization, accurate coarse-scale simulation using
    tension field theory, and a specialized constraint-optimization method. Our system
    is fast enough to warrant interactive exploration of different seam layouts, including
    internal connections, and their effects on the inflated shape. We demonstrate
    the resulting design process on a varied set of simulation examples, some of which
    we have fabricated, demonstrating excellent agreement with the design intent.
acknowledgement: This work was partly funded by the NCCR Co-Me of the Swiss NSF.
article_number: '63'
author:
- first_name: Mélina
  full_name: Skouras, Mélina
  last_name: Skouras
- first_name: Bernhard
  full_name: Thomaszewski, Bernhard
  last_name: Thomaszewski
- first_name: Peter
  full_name: Kaufmann, Peter
  last_name: Kaufmann
- first_name: Akash
  full_name: Garg, Akash
  last_name: Garg
- first_name: Bernd
  full_name: Bickel, Bernd
  id: 49876194-F248-11E8-B48F-1D18A9856A87
  last_name: Bickel
  orcid: 0000-0001-6511-9385
- first_name: Eitan
  full_name: Grinspun, Eitan
  last_name: Grinspun
- first_name: Markus
  full_name: Gross, Markus
  last_name: Gross
citation:
  ama: 'Skouras M, Thomaszewski B, Kaufmann P, et al. Designing inflatable structures.
    In: Vol 33. ACM; 2014. doi:<a href="https://doi.org/10.1145/2601097.2601166">10.1145/2601097.2601166</a>'
  apa: 'Skouras, M., Thomaszewski, B., Kaufmann, P., Garg, A., Bickel, B., Grinspun,
    E., &#38; Gross, M. (2014). Designing inflatable structures (Vol. 33). Presented
    at the SIGGRAPH: Special Interest Group on Computer Graphics and Interactive Techniques,
    ACM. <a href="https://doi.org/10.1145/2601097.2601166">https://doi.org/10.1145/2601097.2601166</a>'
  chicago: Skouras, Mélina, Bernhard Thomaszewski, Peter Kaufmann, Akash Garg, Bernd
    Bickel, Eitan Grinspun, and Markus Gross. “Designing Inflatable Structures,” Vol.
    33. ACM, 2014. <a href="https://doi.org/10.1145/2601097.2601166">https://doi.org/10.1145/2601097.2601166</a>.
  ieee: 'M. Skouras <i>et al.</i>, “Designing inflatable structures,” presented at
    the SIGGRAPH: Special Interest Group on Computer Graphics and Interactive Techniques,
    2014, vol. 33, no. 4.'
  ista: 'Skouras M, Thomaszewski B, Kaufmann P, Garg A, Bickel B, Grinspun E, Gross
    M. 2014. Designing inflatable structures. SIGGRAPH: Special Interest Group on
    Computer Graphics and Interactive Techniques vol. 33, 63.'
  mla: Skouras, Mélina, et al. <i>Designing Inflatable Structures</i>. Vol. 33, no.
    4, 63, ACM, 2014, doi:<a href="https://doi.org/10.1145/2601097.2601166">10.1145/2601097.2601166</a>.
  short: M. Skouras, B. Thomaszewski, P. Kaufmann, A. Garg, B. Bickel, E. Grinspun,
    M. Gross, in:, ACM, 2014.
conference:
  name: 'SIGGRAPH: Special Interest Group on Computer Graphics and Interactive Techniques'
date_created: 2018-12-11T11:55:36Z
date_published: 2014-07-01T00:00:00Z
date_updated: 2021-01-12T06:55:11Z
day: '01'
doi: 10.1145/2601097.2601166
extern: '1'
intvolume: '        33'
issue: '4'
language:
- iso: eng
month: '07'
oa_version: None
publication_status: published
publisher: ACM
publist_id: '4957'
status: public
title: Designing inflatable structures
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 33
year: '2014'
...
---
_id: '2082'
abstract:
- lang: eng
  text: 'NMAC is a mode of operation which turns a fixed input-length keyed hash function
    f into a variable input-length function. A practical single-key variant of NMAC
    called HMAC is a very popular and widely deployed message authentication code
    (MAC). Security proofs and attacks for NMAC can typically be lifted to HMAC. NMAC
    was introduced by Bellare, Canetti and Krawczyk [Crypto''96], who proved it to
    be a secure pseudorandom function (PRF), and thus also a MAC, assuming that (1)
    f is a PRF and (2) the function we get when cascading f is weakly collision-resistant.
    Unfortunately, HMAC is typically instantiated with cryptographic hash functions
    like MD5 or SHA-1 for which (2) has been found to be wrong. To restore the provable
    guarantees for NMAC, Bellare [Crypto''06] showed its security based solely on
    the assumption that f is a PRF, albeit via a non-uniform reduction. - Our first
    contribution is a simpler and uniform proof for this fact: If f is an ε-secure
    PRF (against q queries) and a δ-non-adaptively secure PRF (against q queries),
    then NMAC f is an (ε+ℓqδ)-secure PRF against q queries of length at most ℓ blocks
    each. - We then show that this ε+ℓqδ bound is basically tight. For the most interesting
    case where ℓqδ ≥ ε we prove this by constructing an f for which an attack with
    advantage ℓqδ exists. This also violates the bound O(ℓε) on the PRF-security of
    NMAC recently claimed by Koblitz and Menezes. - Finally, we analyze the PRF-security
    of a modification of NMAC called NI [An and Bellare, Crypto''99] that differs
    mainly by using a compression function with an additional keying input. This avoids
    the constant rekeying on multi-block messages in NMAC and allows for a security
    proof starting by the standard switch from a PRF to a random function, followed
    by an information-theoretic analysis. We carry out such an analysis, obtaining
    a tight ℓq2/2 c bound for this step, improving over the trivial bound of ℓ2q2/2c.
    The proof borrows combinatorial techniques originally developed for proving the
    security of CBC-MAC [Bellare et al., Crypto''05].'
alternative_title:
- LNCS
author:
- first_name: Peter
  full_name: Gazi, Peter
  id: 3E0BFE38-F248-11E8-B48F-1D18A9856A87
  last_name: Gazi
- first_name: Krzysztof Z
  full_name: Pietrzak, Krzysztof Z
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
- first_name: Michal
  full_name: Rybar, Michal
  id: 2B3E3DE8-F248-11E8-B48F-1D18A9856A87
  last_name: Rybar
citation:
  ama: 'Gazi P, Pietrzak KZ, Rybar M. The exact PRF-security of NMAC and HMAC. In:
    Garay J, Gennaro R, eds. Vol 8616. Springer; 2014:113-130. doi:<a href="https://doi.org/10.1007/978-3-662-44371-2_7">10.1007/978-3-662-44371-2_7</a>'
  apa: 'Gazi, P., Pietrzak, K. Z., &#38; Rybar, M. (2014). The exact PRF-security
    of NMAC and HMAC. In J. Garay &#38; R. Gennaro (Eds.) (Vol. 8616, pp. 113–130).
    Presented at the CRYPTO: International Cryptology Conference, Santa Barbara, USA:
    Springer. <a href="https://doi.org/10.1007/978-3-662-44371-2_7">https://doi.org/10.1007/978-3-662-44371-2_7</a>'
  chicago: Gazi, Peter, Krzysztof Z Pietrzak, and Michal Rybar. “The Exact PRF-Security
    of NMAC and HMAC.” edited by Juan Garay and Rosario Gennaro, 8616:113–30. Springer,
    2014. <a href="https://doi.org/10.1007/978-3-662-44371-2_7">https://doi.org/10.1007/978-3-662-44371-2_7</a>.
  ieee: 'P. Gazi, K. Z. Pietrzak, and M. Rybar, “The exact PRF-security of NMAC and
    HMAC,” presented at the CRYPTO: International Cryptology Conference, Santa Barbara,
    USA, 2014, vol. 8616, no. 1, pp. 113–130.'
  ista: 'Gazi P, Pietrzak KZ, Rybar M. 2014. The exact PRF-security of NMAC and HMAC.
    CRYPTO: International Cryptology Conference, LNCS, vol. 8616, 113–130.'
  mla: Gazi, Peter, et al. <i>The Exact PRF-Security of NMAC and HMAC</i>. Edited
    by Juan Garay and Rosario Gennaro, vol. 8616, no. 1, Springer, 2014, pp. 113–30,
    doi:<a href="https://doi.org/10.1007/978-3-662-44371-2_7">10.1007/978-3-662-44371-2_7</a>.
  short: P. Gazi, K.Z. Pietrzak, M. Rybar, in:, J. Garay, R. Gennaro (Eds.), Springer,
    2014, pp. 113–130.
conference:
  end_date: 2014-08-21
  location: Santa Barbara, USA
  name: 'CRYPTO: International Cryptology Conference'
  start_date: 2014-08-17
date_created: 2018-12-11T11:55:36Z
date_published: 2014-01-01T00:00:00Z
date_updated: 2023-09-07T12:02:27Z
day: '01'
ddc:
- '000'
- '004'
department:
- _id: KrPi
doi: 10.1007/978-3-662-44371-2_7
ec_funded: 1
editor:
- first_name: Juan
  full_name: Garay, Juan
  last_name: Garay
- first_name: Rosario
  full_name: Gennaro, Rosario
  last_name: Gennaro
file:
- access_level: open_access
  checksum: dab6ab36a5f6af94f2b597e6404ed11d
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:13:17Z
  date_updated: 2020-07-14T12:45:28Z
  file_id: '4999'
  file_name: IST-2016-682-v1+1_578.pdf
  file_size: 492310
  relation: main_file
file_date_updated: 2020-07-14T12:45:28Z
has_accepted_license: '1'
intvolume: '      8616'
issue: '1'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Submitted Version
page: 113 - 130
project:
- _id: 258C570E-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '259668'
  name: Provable Security for Physical Cryptography
publication_status: published
publisher: Springer
publist_id: '4955'
pubrep_id: '682'
quality_controlled: '1'
related_material:
  record:
  - id: '838'
    relation: dissertation_contains
    status: public
status: public
title: The exact PRF-security of NMAC and HMAC
type: conference
user_id: 4435EBFC-F248-11E8-B48F-1D18A9856A87
volume: 8616
year: '2014'
...
---
_id: '2083'
abstract:
- lang: eng
  text: Understanding the effects of sex and migration on adaptation to novel environments
    remains a key problem in evolutionary biology. Using a single-cell alga Chlamydomonas
    reinhardtii, we investigated how sex and migration affected rates of evolutionary
    rescue in a sink environment, and subsequent changes in fitness following evolutionary
    rescue. We show that sex and migration affect both the rate of evolutionary rescue
    and subsequent adaptation. However, their combined effects change as the populations
    adapt to a sink habitat. Both sex and migration independently increased rates
    of evolutionary rescue, but the effect of sex on subsequent fitness improvements,
    following initial rescue, changed with migration, as sex was beneficial in the
    absence of migration but constraining adaptation when combined with migration.
    These results suggest that sex and migration are beneficial during the initial
    stages of adaptation, but can become detrimental as the population adapts to its
    environment.
acknowledgement: The authors are grateful to the Leverhulme Trust (F/00 215/AW) for
  funding this work.
article_processing_charge: No
article_type: original
author:
- first_name: Mato
  full_name: Lagator, Mato
  id: 345D25EC-F248-11E8-B48F-1D18A9856A87
  last_name: Lagator
- first_name: Andrew
  full_name: Morgan, Andrew
  last_name: Morgan
- first_name: Paul
  full_name: Neve, Paul
  last_name: Neve
- first_name: Nick
  full_name: Colegrave, Nick
  last_name: Colegrave
citation:
  ama: Lagator M, Morgan A, Neve P, Colegrave N. Role of sex and migration in adaptation
    to sink environments. <i>Evolution</i>. 2014;68(8):2296-2305. doi:<a href="https://doi.org/10.1111/evo.12440">10.1111/evo.12440</a>
  apa: Lagator, M., Morgan, A., Neve, P., &#38; Colegrave, N. (2014). Role of sex
    and migration in adaptation to sink environments. <i>Evolution</i>. Wiley. <a
    href="https://doi.org/10.1111/evo.12440">https://doi.org/10.1111/evo.12440</a>
  chicago: Lagator, Mato, Andrew Morgan, Paul Neve, and Nick Colegrave. “Role of Sex
    and Migration in Adaptation to Sink Environments.” <i>Evolution</i>. Wiley, 2014.
    <a href="https://doi.org/10.1111/evo.12440">https://doi.org/10.1111/evo.12440</a>.
  ieee: M. Lagator, A. Morgan, P. Neve, and N. Colegrave, “Role of sex and migration
    in adaptation to sink environments,” <i>Evolution</i>, vol. 68, no. 8. Wiley,
    pp. 2296–2305, 2014.
  ista: Lagator M, Morgan A, Neve P, Colegrave N. 2014. Role of sex and migration
    in adaptation to sink environments. Evolution. 68(8), 2296–2305.
  mla: Lagator, Mato, et al. “Role of Sex and Migration in Adaptation to Sink Environments.”
    <i>Evolution</i>, vol. 68, no. 8, Wiley, 2014, pp. 2296–305, doi:<a href="https://doi.org/10.1111/evo.12440">10.1111/evo.12440</a>.
  short: M. Lagator, A. Morgan, P. Neve, N. Colegrave, Evolution 68 (2014) 2296–2305.
date_created: 2018-12-11T11:55:36Z
date_published: 2014-04-25T00:00:00Z
date_updated: 2023-02-23T14:06:51Z
day: '25'
ddc:
- '570'
department:
- _id: CaGu
doi: 10.1111/evo.12440
file:
- access_level: open_access
  checksum: 8d459b07e4a11bb5fde92d969184fe48
  content_type: application/pdf
  creator: dernst
  date_created: 2020-05-14T16:40:31Z
  date_updated: 2020-07-14T12:45:28Z
  file_id: '7845'
  file_name: 2014_Evolution_Lagator.pdf
  file_size: 467254
  relation: main_file
file_date_updated: 2020-07-14T12:45:28Z
has_accepted_license: '1'
intvolume: '        68'
issue: '8'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
page: 2296 - 2305
publication: Evolution
publication_status: published
publisher: Wiley
publist_id: '4954'
quality_controlled: '1'
related_material:
  record:
  - id: '9747'
    relation: research_data
    status: public
scopus_import: 1
status: public
title: Role of sex and migration in adaptation to sink environments
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 68
year: '2014'
...
---
_id: '2084'
abstract:
- lang: eng
  text: Receptor tyrosine kinases (RTKs) are a large family of cell surface receptors
    that sense growth factors and hormones and regulate a variety of cell behaviours
    in health and disease. Contactless activation of RTKs with spatial and temporal
    precision is currently not feasible. Here, we generated RTKs that are insensitive
    to endogenous ligands but can be selectively activated by low-intensity blue light.
    We screened light-oxygen-voltage (LOV)-sensing domains for their ability to activate
    RTKs by light-activated dimerization. Incorporation of LOV domains found in aureochrome
    photoreceptors of stramenopiles resulted in robust activation of the fibroblast
    growth factor receptor 1 (FGFR1), epidermal growth factor receptor (EGFR) and
    rearranged during transfection (RET). In human cancer and endothelial cells, light
    induced cellular signalling with spatial and temporal precision. Furthermore,
    light faithfully mimicked complex mitogenic and morphogenic cell behaviour induced
    by growth factors. RTKs under optical control (Opto-RTKs) provide a powerful optogenetic
    approach to actuate cellular signals and manipulate cell behaviour.
acknowledgement: European Union Seventh Framework Programme; Human Frontier Science
  Program; Oesterreichische Nationalbank Anniversary Fund 14211; Austrian Research
  Promotion Agency; FemTech
author:
- first_name: Michael
  full_name: Grusch, Michael
  last_name: Grusch
- first_name: Karin
  full_name: Schelch, Karin
  last_name: Schelch
- first_name: Robert
  full_name: Riedler, Robert
  last_name: Riedler
- first_name: Eva
  full_name: Gschaider-Reichhart, Eva
  id: 3FEE232A-F248-11E8-B48F-1D18A9856A87
  last_name: Gschaider-Reichhart
  orcid: 0000-0002-7218-7738
- first_name: Christopher
  full_name: Differ, Christopher
  last_name: Differ
- first_name: Walter
  full_name: Berger, Walter
  last_name: Berger
- first_name: Álvaro
  full_name: Inglés Prieto, Álvaro
  id: 2A9DB292-F248-11E8-B48F-1D18A9856A87
  last_name: Inglés Prieto
  orcid: 0000-0002-5409-8571
- first_name: Harald L
  full_name: Janovjak, Harald L
  id: 33BA6C30-F248-11E8-B48F-1D18A9856A87
  last_name: Janovjak
  orcid: 0000-0002-8023-9315
citation:
  ama: Grusch M, Schelch K, Riedler R, et al. Spatio-temporally precise activation
    of engineered receptor tyrosine kinases by light. <i>EMBO Journal</i>. 2014;33(15):1713-1726.
    doi:<a href="https://doi.org/10.15252/embj.201387695">10.15252/embj.201387695</a>
  apa: Grusch, M., Schelch, K., Riedler, R., Gschaider-Reichhart, E., Differ, C.,
    Berger, W., … Janovjak, H. L. (2014). Spatio-temporally precise activation of
    engineered receptor tyrosine kinases by light. <i>EMBO Journal</i>. Wiley-Blackwell.
    <a href="https://doi.org/10.15252/embj.201387695">https://doi.org/10.15252/embj.201387695</a>
  chicago: Grusch, Michael, Karin Schelch, Robert Riedler, Eva Gschaider-Reichhart,
    Christopher Differ, Walter Berger, Álvaro Inglés Prieto, and Harald L Janovjak.
    “Spatio-Temporally Precise Activation of Engineered Receptor Tyrosine Kinases
    by Light.” <i>EMBO Journal</i>. Wiley-Blackwell, 2014. <a href="https://doi.org/10.15252/embj.201387695">https://doi.org/10.15252/embj.201387695</a>.
  ieee: M. Grusch <i>et al.</i>, “Spatio-temporally precise activation of engineered
    receptor tyrosine kinases by light,” <i>EMBO Journal</i>, vol. 33, no. 15. Wiley-Blackwell,
    pp. 1713–1726, 2014.
  ista: Grusch M, Schelch K, Riedler R, Gschaider-Reichhart E, Differ C, Berger W,
    Inglés Prieto Á, Janovjak HL. 2014. Spatio-temporally precise activation of engineered
    receptor tyrosine kinases by light. EMBO Journal. 33(15), 1713–1726.
  mla: Grusch, Michael, et al. “Spatio-Temporally Precise Activation of Engineered
    Receptor Tyrosine Kinases by Light.” <i>EMBO Journal</i>, vol. 33, no. 15, Wiley-Blackwell,
    2014, pp. 1713–26, doi:<a href="https://doi.org/10.15252/embj.201387695">10.15252/embj.201387695</a>.
  short: M. Grusch, K. Schelch, R. Riedler, E. Gschaider-Reichhart, C. Differ, W.
    Berger, Á. Inglés Prieto, H.L. Janovjak, EMBO Journal 33 (2014) 1713–1726.
date_created: 2018-12-11T11:55:37Z
date_published: 2014-07-01T00:00:00Z
date_updated: 2023-09-07T12:49:09Z
day: '01'
department:
- _id: HaJa
doi: 10.15252/embj.201387695
intvolume: '        33'
issue: '15'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4194103/
month: '07'
oa: 1
oa_version: Submitted Version
page: 1713 - 1726
publication: EMBO Journal
publication_status: published
publisher: Wiley-Blackwell
publist_id: '4953'
quality_controlled: '1'
related_material:
  record:
  - id: '418'
    relation: dissertation_contains
    status: public
scopus_import: 1
status: public
title: Spatio-temporally precise activation of engineered receptor tyrosine kinases
  by light
type: journal_article
user_id: 4435EBFC-F248-11E8-B48F-1D18A9856A87
volume: 33
year: '2014'
...
---
_id: '2086'
abstract:
- lang: eng
  text: Pathogens may gain a fitness advantage through manipulation of the behaviour
    of their hosts. Likewise, host behavioural changes can be a defence mechanism,
    counteracting the impact of pathogens on host fitness. We apply harmonic radar
    technology to characterize the impact of an emerging pathogen - Nosema ceranae
    (Microsporidia) - on honeybee (Apis mellifera) flight and orientation performance
    in the field. Honeybees are the most important commercial pollinators. Emerging
    diseases have been proposed to play a prominent role in colony decline, partly
    through sub-lethal behavioural manipulation of their hosts. We found that homing
    success was significantly reduced in diseased (65.8%) versus healthy foragers
    (92.5%). Although lost bees had significantly reduced continuous flight times
    and prolonged resting times, other flight characteristics and navigational abilities
    showed no significant difference between infected and non-infected bees. Our results
    suggest that infected bees express normal flight characteristics but are constrained
    in their homing ability, potentially compromising the colony by reducing its resource
    inputs, but also counteracting the intra-colony spread of infection. We provide
    the first high-resolution analysis of sub-lethal effects of an emerging disease
    on insect flight behaviour. The potential causes and the implications for both
    host and parasite are discussed.
acknowledgement: This study was funded jointly by a grant from BBSRC, Defra, NERC,
  the Scottish Government and the Wellcome Trust, under the Insect Pollinators Initiative
  (grant numbers BB/I00097/1 and BB/I000100/1). Rothamsted Research is a national
  institute of bioscience strategically funded by the UK Biotechnology and Biological
  Sciences Research Council (BBSRC).
article_number: e103989
author:
- first_name: Stephan
  full_name: Wolf, Stephan
  last_name: Wolf
- first_name: Dino
  full_name: Mcmahon, Dino
  last_name: Mcmahon
- first_name: Ka
  full_name: Lim, Ka
  last_name: Lim
- first_name: Christopher
  full_name: Pull, Christopher
  id: 3C7F4840-F248-11E8-B48F-1D18A9856A87
  last_name: Pull
  orcid: 0000-0003-1122-3982
- first_name: Suzanne
  full_name: Clark, Suzanne
  last_name: Clark
- first_name: Robert
  full_name: Paxton, Robert
  last_name: Paxton
- first_name: Juliet
  full_name: Osborne, Juliet
  last_name: Osborne
citation:
  ama: 'Wolf S, Mcmahon D, Lim K, et al. So near and yet so far: Harmonic radar reveals
    reduced homing ability of Nosema infected honeybees. <i>PLoS One</i>. 2014;9(8).
    doi:<a href="https://doi.org/10.1371/journal.pone.0103989">10.1371/journal.pone.0103989</a>'
  apa: 'Wolf, S., Mcmahon, D., Lim, K., Pull, C., Clark, S., Paxton, R., &#38; Osborne,
    J. (2014). So near and yet so far: Harmonic radar reveals reduced homing ability
    of Nosema infected honeybees. <i>PLoS One</i>. Public Library of Science. <a href="https://doi.org/10.1371/journal.pone.0103989">https://doi.org/10.1371/journal.pone.0103989</a>'
  chicago: 'Wolf, Stephan, Dino Mcmahon, Ka Lim, Christopher Pull, Suzanne Clark,
    Robert Paxton, and Juliet Osborne. “So near and yet so Far: Harmonic Radar Reveals
    Reduced Homing Ability of Nosema Infected Honeybees.” <i>PLoS One</i>. Public
    Library of Science, 2014. <a href="https://doi.org/10.1371/journal.pone.0103989">https://doi.org/10.1371/journal.pone.0103989</a>.'
  ieee: 'S. Wolf <i>et al.</i>, “So near and yet so far: Harmonic radar reveals reduced
    homing ability of Nosema infected honeybees,” <i>PLoS One</i>, vol. 9, no. 8.
    Public Library of Science, 2014.'
  ista: 'Wolf S, Mcmahon D, Lim K, Pull C, Clark S, Paxton R, Osborne J. 2014. So
    near and yet so far: Harmonic radar reveals reduced homing ability of Nosema infected
    honeybees. PLoS One. 9(8), e103989.'
  mla: 'Wolf, Stephan, et al. “So near and yet so Far: Harmonic Radar Reveals Reduced
    Homing Ability of Nosema Infected Honeybees.” <i>PLoS One</i>, vol. 9, no. 8,
    e103989, Public Library of Science, 2014, doi:<a href="https://doi.org/10.1371/journal.pone.0103989">10.1371/journal.pone.0103989</a>.'
  short: S. Wolf, D. Mcmahon, K. Lim, C. Pull, S. Clark, R. Paxton, J. Osborne, PLoS
    One 9 (2014).
date_created: 2018-12-11T11:55:37Z
date_published: 2014-08-06T00:00:00Z
date_updated: 2023-02-23T14:11:56Z
day: '06'
ddc:
- '570'
department:
- _id: SyCr
doi: 10.1371/journal.pone.0103989
file:
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month: '08'
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oa_version: Published Version
publication: PLoS One
publication_status: published
publisher: Public Library of Science
publist_id: '4949'
pubrep_id: '437'
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related_material:
  record:
  - id: '9888'
    relation: research_data
    status: public
scopus_import: 1
status: public
title: 'So near and yet so far: Harmonic radar reveals reduced homing ability of Nosema
  infected honeybees'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4435EBFC-F248-11E8-B48F-1D18A9856A87
volume: 9
year: '2014'
...
---
_id: '2115'
abstract:
- lang: eng
  text: The facial performance of an individual is inherently rich in subtle deformation
    and timing details. Although these subtleties make the performance realistic and
    compelling, they often elude both motion capture and hand animation. We present
    a technique for adding fine-scale details and expressiveness to low-resolution
    art-directed facial performances, such as those created manually using a rig,
    via marker-based capture, by fitting a morphable model to a video, or through
    Kinect reconstruction using recent faceshift technology. We employ a high-resolution
    facial performance capture system to acquire a representative performance of an
    individual in which he or she explores the full range of facial expressiveness.
    From the captured data, our system extracts an expressiveness model that encodes
    subtle spatial and temporal deformation details specific to that particular individual.
    Once this model has been built, these details can be transferred to low-resolution
    art-directed performances. We demonstrate results on various forms of input; after
    our enhancement, the resulting animations exhibit the same nuances and fine spatial
    details as the captured performance, with optional temporal enhancement to match
    the dynamics of the actor. Finally, we show that our technique outperforms the
    current state-of-the-art in example-based facial animation.
author:
- first_name: Amit
  full_name: Bermano, Amit H
  last_name: Bermano
- first_name: Derek
  full_name: Bradley, Derek J
  last_name: Bradley
- first_name: Thabo
  full_name: Beeler, Thabo
  last_name: Beeler
- first_name: Fabio
  full_name: Zund, Fabio
  last_name: Zund
- first_name: Derek
  full_name: Nowrouzezahrai, Derek
  last_name: Nowrouzezahrai
- first_name: Ilya
  full_name: Baran, Ilya
  last_name: Baran
- first_name: Olga
  full_name: Sorkine-Hornung, Olga
  last_name: Sorkine Hornung
- first_name: Hanspeter
  full_name: Pfister, Hanspeter
  last_name: Pfister
- first_name: Robert
  full_name: Sumner, Robert W
  last_name: Sumner
- first_name: Bernd
  full_name: Bernd Bickel
  id: 49876194-F248-11E8-B48F-1D18A9856A87
  last_name: Bickel
  orcid: 0000-0001-6511-9385
- first_name: Markus
  full_name: Groß, Markus S
  last_name: Groß
citation:
  ama: Bermano A, Bradley D, Beeler T, et al. Facial performance enhancement using
    dynamic shape space analysis. <i>ACM Transactions on Graphics</i>. 2014;33(2).
    doi:<a href="https://doi.org/10.1145/2546276">10.1145/2546276</a>
  apa: Bermano, A., Bradley, D., Beeler, T., Zund, F., Nowrouzezahrai, D., Baran,
    I., … Groß, M. (2014). Facial performance enhancement using dynamic shape space
    analysis. <i>ACM Transactions on Graphics</i>. ACM. <a href="https://doi.org/10.1145/2546276">https://doi.org/10.1145/2546276</a>
  chicago: Bermano, Amit, Derek Bradley, Thabo Beeler, Fabio Zund, Derek Nowrouzezahrai,
    Ilya Baran, Olga Sorkine Hornung, et al. “Facial Performance Enhancement Using
    Dynamic Shape Space Analysis.” <i>ACM Transactions on Graphics</i>. ACM, 2014.
    <a href="https://doi.org/10.1145/2546276">https://doi.org/10.1145/2546276</a>.
  ieee: A. Bermano <i>et al.</i>, “Facial performance enhancement using dynamic shape
    space analysis,” <i>ACM Transactions on Graphics</i>, vol. 33, no. 2. ACM, 2014.
  ista: Bermano A, Bradley D, Beeler T, Zund F, Nowrouzezahrai D, Baran I, Sorkine
    Hornung O, Pfister H, Sumner R, Bickel B, Groß M. 2014. Facial performance enhancement
    using dynamic shape space analysis. ACM Transactions on Graphics. 33(2).
  mla: Bermano, Amit, et al. “Facial Performance Enhancement Using Dynamic Shape Space
    Analysis.” <i>ACM Transactions on Graphics</i>, vol. 33, no. 2, ACM, 2014, doi:<a
    href="https://doi.org/10.1145/2546276">10.1145/2546276</a>.
  short: A. Bermano, D. Bradley, T. Beeler, F. Zund, D. Nowrouzezahrai, I. Baran,
    O. Sorkine Hornung, H. Pfister, R. Sumner, B. Bickel, M. Groß, ACM Transactions
    on Graphics 33 (2014).
date_created: 2018-12-11T11:55:48Z
date_published: 2014-03-01T00:00:00Z
date_updated: 2021-01-12T06:55:24Z
day: '01'
doi: 10.1145/2546276
extern: 1
intvolume: '        33'
issue: '2'
month: '03'
publication: ACM Transactions on Graphics
publication_status: published
publisher: ACM
publist_id: '4919'
quality_controlled: 0
status: public
title: Facial performance enhancement using dynamic shape space analysis
type: journal_article
volume: 33
year: '2014'
...
---
_id: '2131'
abstract:
- lang: eng
  text: We study approximations to a class of vector-valued equations of Burgers type
    driven by a multiplicative space-time white noise. A solution theory for this
    class of equations has been developed recently in Probability Theory Related Fields
    by Hairer and Weber. The key idea was to use the theory of controlled rough paths
    to give definitions of weak/mild solutions and to set up a Picard iteration argument.
    In this article the limiting behavior of a rather large class of (spatial) approximations
    to these equations is studied. These approximations are shown to converge and
    convergence rates are given, but the limit may depend on the particular choice
    of approximation. This effect is a spatial analogue to the Itô-Stratonovich correction
    in the theory of stochastic ordinary differential equations, where it is well
    known that different approximation schemes may converge to different solutions.
acknowledgement: JM is supported by Rubicon grant 680-50-0901 of the Netherlands Organisation
  for Scientific Research (NWO). MH is supported by EPSRC grant EP/D071593/1 and by
  the Royal Society through a Wolfson Research Merit Award. Both MH and HW are supported
  by the Le
author:
- first_name: Martin
  full_name: Hairer, Martin M
  last_name: Hairer
- first_name: Jan
  full_name: Jan Maas
  id: 4C5696CE-F248-11E8-B48F-1D18A9856A87
  last_name: Maas
  orcid: 0000-0002-0845-1338
- first_name: Hendrik
  full_name: Weber, Hendrik
  last_name: Weber
citation:
  ama: Hairer M, Maas J, Weber H. Approximating Rough Stochastic PDEs. <i>Communications
    on Pure and Applied Mathematics</i>. 2014;67(5):776-870. doi:<a href="https://doi.org/10.1002/cpa.21495">10.1002/cpa.21495</a>
  apa: Hairer, M., Maas, J., &#38; Weber, H. (2014). Approximating Rough Stochastic
    PDEs. <i>Communications on Pure and Applied Mathematics</i>. Wiley-Blackwell.
    <a href="https://doi.org/10.1002/cpa.21495">https://doi.org/10.1002/cpa.21495</a>
  chicago: Hairer, Martin, Jan Maas, and Hendrik Weber. “Approximating Rough Stochastic
    PDEs.” <i>Communications on Pure and Applied Mathematics</i>. Wiley-Blackwell,
    2014. <a href="https://doi.org/10.1002/cpa.21495">https://doi.org/10.1002/cpa.21495</a>.
  ieee: M. Hairer, J. Maas, and H. Weber, “Approximating Rough Stochastic PDEs,” <i>Communications
    on Pure and Applied Mathematics</i>, vol. 67, no. 5. Wiley-Blackwell, pp. 776–870,
    2014.
  ista: Hairer M, Maas J, Weber H. 2014. Approximating Rough Stochastic PDEs. Communications
    on Pure and Applied Mathematics. 67(5), 776–870.
  mla: Hairer, Martin, et al. “Approximating Rough Stochastic PDEs.” <i>Communications
    on Pure and Applied Mathematics</i>, vol. 67, no. 5, Wiley-Blackwell, 2014, pp.
    776–870, doi:<a href="https://doi.org/10.1002/cpa.21495">10.1002/cpa.21495</a>.
  short: M. Hairer, J. Maas, H. Weber, Communications on Pure and Applied Mathematics
    67 (2014) 776–870.
date_created: 2018-12-11T11:55:53Z
date_published: 2014-05-01T00:00:00Z
date_updated: 2021-01-12T06:55:30Z
day: '01'
doi: 10.1002/cpa.21495
extern: 1
intvolume: '        67'
issue: '5'
main_file_link:
- open_access: '1'
  url: 'http://arxiv.org/abs/1202.3094 '
month: '05'
oa: 1
page: 776 - 870
publication: Communications on Pure and Applied Mathematics
publication_status: published
publisher: Wiley-Blackwell
publist_id: '4902'
quality_controlled: 0
status: public
title: Approximating Rough Stochastic PDEs
type: journal_article
volume: 67
year: '2014'
...
---
_id: '2132'
abstract:
- lang: eng
  text: We consider discrete porous medium equations of the form ∂tρt=Δϕ(ρt), where
    Δ is the generator of a reversible continuous time Markov chain on a finite set
    χ, and ϕ is an increasing function. We show that these equations arise as gradient
    flows of certain entropy functionals with respect to suitable non-local transportation
    metrics. This may be seen as a discrete analogue of the Wasserstein gradient flow
    structure for porous medium equations in ℝn discovered by Otto. We present a one-dimensional
    counterexample to geodesic convexity and discuss Gromov-Hausdorff convergence
    to the Wasserstein metric.
author:
- first_name: Matthias
  full_name: Erbar, Matthias
  last_name: Erbar
- first_name: Jan
  full_name: Jan Maas
  id: 4C5696CE-F248-11E8-B48F-1D18A9856A87
  last_name: Maas
  orcid: 0000-0002-0845-1338
citation:
  ama: Erbar M, Maas J. Gradient flow structures for discrete porous medium equations.
    <i>Discrete and Continuous Dynamical Systems- Series A</i>. 2014;34(4):1355-1374.
    doi:<a href="https://doi.org/10.3934/dcds.2014.34.1355  ">10.3934/dcds.2014.34.1355 
    </a>
  apa: Erbar, M., &#38; Maas, J. (2014). Gradient flow structures for discrete porous
    medium equations. <i>Discrete and Continuous Dynamical Systems- Series A</i>.
    Southwest Missouri State University. <a href="https://doi.org/10.3934/dcds.2014.34.1355 
    ">https://doi.org/10.3934/dcds.2014.34.1355  </a>
  chicago: Erbar, Matthias, and Jan Maas. “Gradient Flow Structures for Discrete Porous
    Medium Equations.” <i>Discrete and Continuous Dynamical Systems- Series A</i>.
    Southwest Missouri State University, 2014. <a href="https://doi.org/10.3934/dcds.2014.34.1355 
    ">https://doi.org/10.3934/dcds.2014.34.1355  </a>.
  ieee: M. Erbar and J. Maas, “Gradient flow structures for discrete porous medium
    equations,” <i>Discrete and Continuous Dynamical Systems- Series A</i>, vol. 34,
    no. 4. Southwest Missouri State University, pp. 1355–1374, 2014.
  ista: Erbar M, Maas J. 2014. Gradient flow structures for discrete porous medium
    equations. Discrete and Continuous Dynamical Systems- Series A. 34(4), 1355–1374.
  mla: Erbar, Matthias, and Jan Maas. “Gradient Flow Structures for Discrete Porous
    Medium Equations.” <i>Discrete and Continuous Dynamical Systems- Series A</i>,
    vol. 34, no. 4, Southwest Missouri State University, 2014, pp. 1355–74, doi:<a
    href="https://doi.org/10.3934/dcds.2014.34.1355  ">10.3934/dcds.2014.34.1355 
    </a>.
  short: M. Erbar, J. Maas, Discrete and Continuous Dynamical Systems- Series A 34
    (2014) 1355–1374.
date_created: 2018-12-11T11:55:54Z
date_published: 2014-04-01T00:00:00Z
date_updated: 2021-01-12T06:55:30Z
day: '01'
doi: '10.3934/dcds.2014.34.1355  '
extern: 1
intvolume: '        34'
issue: '4'
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1212.1129
month: '04'
oa: 1
page: 1355 - 1374
publication: Discrete and Continuous Dynamical Systems- Series A
publication_status: published
publisher: Southwest Missouri State University
publist_id: '4903'
quality_controlled: 0
status: public
title: Gradient flow structures for discrete porous medium equations
type: journal_article
volume: 34
year: '2014'
...
---
_id: '2133'
abstract:
- lang: eng
  text: "Let ℭ denote the Clifford algebra over ℝ\U0001D45B, which is the von Neumann
    algebra generated by n self-adjoint operators Q j , j = 1,…,n satisfying the canonical
    anticommutation relations, Q i Q j  + Q j Q i =  2δ ij I, and let τ denote the
    normalized trace on ℭ. This algebra arises in quantum mechanics as the algebra
    of observables generated by n fermionic degrees of freedom. Let \U0001D513 denote
    the set of all positive operators \U0001D70C∈ℭ such that τ(ρ) = 1; these are the
    non-commutative analogs of probability densities in the non-commutative probability
    space (ℭ,\U0001D70F). The fermionic Fokker–Planck equation is a quantum-mechanical
    analog of the classical Fokker–Planck equation with which it has much in common,
    such as the same optimal hypercontractivity properties. In this paper we construct
    a Riemannian metric on \U0001D513 that we show to be a natural analog of the classical
    2-Wasserstein metric, and we show that, in analogy with the classical case, the
    fermionic Fokker–Planck equation is gradient flow in this metric for the relative
    entropy with respect to the ground state. We derive a number of consequences of
    this, such as a sharp Talagrand inequality for this metric, and we prove a number
    of results pertaining to this metric. Several open problems are raised."
author:
- first_name: Eric
  full_name: Carlen, Eric
  last_name: Carlen
- first_name: Jan
  full_name: Maas, Jan
  id: 4C5696CE-F248-11E8-B48F-1D18A9856A87
  last_name: Maas
  orcid: 0000-0002-0845-1338
citation:
  ama: Carlen E, Maas J. An analog of the 2-Wasserstein metric in non-commutative
    probability under which the fermionic Fokker-Planck equation is gradient flow
    for the entropy. <i>Communications in Mathematical Physics</i>. 2014;331(3):887-926.
    doi:<a href="https://doi.org/10.1007/s00220-014-2124-8">10.1007/s00220-014-2124-8</a>
  apa: Carlen, E., &#38; Maas, J. (2014). An analog of the 2-Wasserstein metric in
    non-commutative probability under which the fermionic Fokker-Planck equation is
    gradient flow for the entropy. <i>Communications in Mathematical Physics</i>.
    Springer. <a href="https://doi.org/10.1007/s00220-014-2124-8">https://doi.org/10.1007/s00220-014-2124-8</a>
  chicago: Carlen, Eric, and Jan Maas. “An Analog of the 2-Wasserstein Metric in Non-Commutative
    Probability under Which the Fermionic Fokker-Planck Equation Is Gradient Flow
    for the Entropy.” <i>Communications in Mathematical Physics</i>. Springer, 2014.
    <a href="https://doi.org/10.1007/s00220-014-2124-8">https://doi.org/10.1007/s00220-014-2124-8</a>.
  ieee: E. Carlen and J. Maas, “An analog of the 2-Wasserstein metric in non-commutative
    probability under which the fermionic Fokker-Planck equation is gradient flow
    for the entropy,” <i>Communications in Mathematical Physics</i>, vol. 331, no.
    3. Springer, pp. 887–926, 2014.
  ista: Carlen E, Maas J. 2014. An analog of the 2-Wasserstein metric in non-commutative
    probability under which the fermionic Fokker-Planck equation is gradient flow
    for the entropy. Communications in Mathematical Physics. 331(3), 887–926.
  mla: Carlen, Eric, and Jan Maas. “An Analog of the 2-Wasserstein Metric in Non-Commutative
    Probability under Which the Fermionic Fokker-Planck Equation Is Gradient Flow
    for the Entropy.” <i>Communications in Mathematical Physics</i>, vol. 331, no.
    3, Springer, 2014, pp. 887–926, doi:<a href="https://doi.org/10.1007/s00220-014-2124-8">10.1007/s00220-014-2124-8</a>.
  short: E. Carlen, J. Maas, Communications in Mathematical Physics 331 (2014) 887–926.
date_created: 2018-12-11T11:55:54Z
date_published: 2014-11-01T00:00:00Z
date_updated: 2021-01-12T06:55:30Z
day: '01'
doi: 10.1007/s00220-014-2124-8
extern: '1'
intvolume: '       331'
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: 'http://arxiv.org/abs/1203.5377 '
month: '11'
oa: 1
oa_version: Submitted Version
page: 887 - 926
publication: Communications in Mathematical Physics
publication_status: published
publisher: Springer
publist_id: '4901'
quality_controlled: '1'
status: public
title: An analog of the 2-Wasserstein metric in non-commutative probability under
  which the fermionic Fokker-Planck equation is gradient flow for the entropy
type: journal_article
user_id: 4435EBFC-F248-11E8-B48F-1D18A9856A87
volume: 331
year: '2014'
...
---
_id: '2140'
abstract:
- lang: eng
  text: We propose a technique for engineering momentum-dependent dissipation in Bose-Einstein
    condensates with non-local interactions. The scheme relies on the use of momentum-dependent
    dark-states in close analogy to velocity-selective coherent population trapping.
    During the short-time dissipative dynamics, the system is driven into a particular
    finite-momentum phonon mode, which in real space corresponds to an ordered structure
    with non-local density-density correlations. Dissipation-induced ordering can
    be observed and studied in present-day experiments using cold atoms with dipole-dipole
    or off-resonant Rydberg interactions. Due to its dissipative nature, the ordering
    does not require artificial breaking of translational symmetry by an opticallattice
    or harmonic trap. This opens up a perspective of direct cooling of quantum gases
    into strongly-interacting phases.
acknowledgement: This work was supported by NSF through a grant for the Institute
  for Theoretical Atomic, Molecular, and Optical Physics at Harvard University and
  Smithsonian Astrophysical Observatory as well as the Harvard Quantum Optics Center.
article_number: '070401'
author:
- first_name: Johannes
  full_name: Otterbach, Johannes
  last_name: Otterbach
- first_name: Mikhail
  full_name: Lemeshko, Mikhail
  id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
  last_name: Lemeshko
  orcid: 0000-0002-6990-7802
citation:
  ama: Otterbach J, Lemeshko M. Dissipative preparation of spatial order in Rydberg-dressed
    Bose-Einstein condensates. <i>Physical Review Letters</i>. 2014;113(7). doi:<a
    href="https://doi.org/10.1103/PhysRevLett.113.070401">10.1103/PhysRevLett.113.070401</a>
  apa: Otterbach, J., &#38; Lemeshko, M. (2014). Dissipative preparation of spatial
    order in Rydberg-dressed Bose-Einstein condensates. <i>Physical Review Letters</i>.
    American Physical Society. <a href="https://doi.org/10.1103/PhysRevLett.113.070401">https://doi.org/10.1103/PhysRevLett.113.070401</a>
  chicago: Otterbach, Johannes, and Mikhail Lemeshko. “Dissipative Preparation of
    Spatial Order in Rydberg-Dressed Bose-Einstein Condensates.” <i>Physical Review
    Letters</i>. American Physical Society, 2014. <a href="https://doi.org/10.1103/PhysRevLett.113.070401">https://doi.org/10.1103/PhysRevLett.113.070401</a>.
  ieee: J. Otterbach and M. Lemeshko, “Dissipative preparation of spatial order in
    Rydberg-dressed Bose-Einstein condensates,” <i>Physical Review Letters</i>, vol.
    113, no. 7. American Physical Society, 2014.
  ista: Otterbach J, Lemeshko M. 2014. Dissipative preparation of spatial order in
    Rydberg-dressed Bose-Einstein condensates. Physical Review Letters. 113(7), 070401.
  mla: Otterbach, Johannes, and Mikhail Lemeshko. “Dissipative Preparation of Spatial
    Order in Rydberg-Dressed Bose-Einstein Condensates.” <i>Physical Review Letters</i>,
    vol. 113, no. 7, 070401, American Physical Society, 2014, doi:<a href="https://doi.org/10.1103/PhysRevLett.113.070401">10.1103/PhysRevLett.113.070401</a>.
  short: J. Otterbach, M. Lemeshko, Physical Review Letters 113 (2014).
date_created: 2018-12-11T11:55:56Z
date_published: 2014-08-11T00:00:00Z
date_updated: 2021-01-12T06:55:33Z
day: '11'
doi: 10.1103/PhysRevLett.113.070401
extern: '1'
intvolume: '       113'
issue: '7'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1308.5905
month: '08'
oa: 1
oa_version: Submitted Version
publication: Physical Review Letters
publication_status: published
publisher: American Physical Society
publist_id: '4884'
status: public
title: Dissipative preparation of spatial order in Rydberg-dressed Bose-Einstein condensates
type: journal_article
user_id: 4435EBFC-F248-11E8-B48F-1D18A9856A87
volume: 113
year: '2014'
...
