---
_id: '9769'
abstract:
- lang: eng
  text: A few years ago, flow equations were introduced as a technique for calculating
    the ground-state energies of cold Bose gases with and without impurities. In this
    paper, we extend this approach to compute observables other than the energy. As
    an example, we calculate the densities, and phase fluctuations of one-dimensional
    Bose gases with one and two impurities. For a single mobile impurity, we use flow
    equations to validate the mean-field results obtained upon the Lee-Low-Pines transformation.
    We show that the mean-field approximation is accurate for all values of the boson-impurity
    interaction strength as long as the phase coherence length is much larger than
    the healing length of the condensate. For two static impurities, we calculate
    impurity-impurity interactions induced by the Bose gas. We find that leading order
    perturbation theory fails when boson-impurity interactions are stronger than boson-boson
    interactions. The mean-field approximation reproduces the flow equation results
    for all values of the boson-impurity interaction strength as long as boson-boson
    interactions are weak.
acknowledgement: We thank Matthias Heinz and Volker Karle for helpful comments on
  the manuscript; Zoran Ristivojevic for useful correspondence regarding mean-field
  calculations of induced impurity-impurity interactions; Fabian Grusdt for sharing
  with us the data for the densities presented in Ref. [14]. This work has received
  funding from the DFG Project No. 413495248 [VO 2437/1-1] (F. B., H.-W. H., A. G.
  V.) and European Union’s Horizon 2020 research and innovation programme under the
  Marie Skłodowska-Curie Grant Agreement No. 754411 (A. G. V.). M. L. acknowledges
  support by the European Research Council (ERC) Starting Grant No. 801770 (ANGULON).
  H.-W.H. thanks the ECT* for hospitality during the workshop “Universal physics in
  Many-Body Quantum Systems – From Atoms to Quarks". This infrastructure is part of
  a project that has received funding from the European Union’s Horizon 2020 research
  and innovation programme under grant agreement No 824093. H.-W.H. was supported
  by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) - Project-ID
  279384907 - SFB 1245.
article_number: '008'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Fabian
  full_name: Brauneis, Fabian
  last_name: Brauneis
- first_name: Hans-Werner
  full_name: Hammer, Hans-Werner
  last_name: Hammer
- first_name: Mikhail
  full_name: Lemeshko, Mikhail
  id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
  last_name: Lemeshko
  orcid: 0000-0002-6990-7802
- first_name: Artem
  full_name: Volosniev, Artem
  id: 37D278BC-F248-11E8-B48F-1D18A9856A87
  last_name: Volosniev
  orcid: 0000-0003-0393-5525
citation:
  ama: 'Brauneis F, Hammer H-W, Lemeshko M, Volosniev A. Impurities in a one-dimensional
    Bose gas: The flow equation approach. <i>SciPost Physics</i>. 2021;11(1). doi:<a
    href="https://doi.org/10.21468/scipostphys.11.1.008">10.21468/scipostphys.11.1.008</a>'
  apa: 'Brauneis, F., Hammer, H.-W., Lemeshko, M., &#38; Volosniev, A. (2021). Impurities
    in a one-dimensional Bose gas: The flow equation approach. <i>SciPost Physics</i>.
    SciPost. <a href="https://doi.org/10.21468/scipostphys.11.1.008">https://doi.org/10.21468/scipostphys.11.1.008</a>'
  chicago: 'Brauneis, Fabian, Hans-Werner Hammer, Mikhail Lemeshko, and Artem Volosniev.
    “Impurities in a One-Dimensional Bose Gas: The Flow Equation Approach.” <i>SciPost
    Physics</i>. SciPost, 2021. <a href="https://doi.org/10.21468/scipostphys.11.1.008">https://doi.org/10.21468/scipostphys.11.1.008</a>.'
  ieee: 'F. Brauneis, H.-W. Hammer, M. Lemeshko, and A. Volosniev, “Impurities in
    a one-dimensional Bose gas: The flow equation approach,” <i>SciPost Physics</i>,
    vol. 11, no. 1. SciPost, 2021.'
  ista: 'Brauneis F, Hammer H-W, Lemeshko M, Volosniev A. 2021. Impurities in a one-dimensional
    Bose gas: The flow equation approach. SciPost Physics. 11(1), 008.'
  mla: 'Brauneis, Fabian, et al. “Impurities in a One-Dimensional Bose Gas: The Flow
    Equation Approach.” <i>SciPost Physics</i>, vol. 11, no. 1, 008, SciPost, 2021,
    doi:<a href="https://doi.org/10.21468/scipostphys.11.1.008">10.21468/scipostphys.11.1.008</a>.'
  short: F. Brauneis, H.-W. Hammer, M. Lemeshko, A. Volosniev, SciPost Physics 11
    (2021).
date_created: 2021-08-04T15:00:55Z
date_published: 2021-07-13T00:00:00Z
date_updated: 2023-08-11T10:25:44Z
day: '13'
ddc:
- '530'
department:
- _id: MiLe
doi: 10.21468/scipostphys.11.1.008
ec_funded: 1
external_id:
  arxiv:
  - '2101.10958'
  isi:
  - '000680039500013'
file:
- access_level: open_access
  checksum: eaa847346b1a023d97bbb291779610ed
  content_type: application/pdf
  creator: asandaue
  date_created: 2021-08-10T11:44:59Z
  date_updated: 2021-08-10T11:44:59Z
  file_id: '9875'
  file_name: 2021_SciPostPhysics_Brauneis.pdf
  file_size: 1085300
  relation: main_file
  success: 1
file_date_updated: 2021-08-10T11:44:59Z
has_accepted_license: '1'
intvolume: '        11'
isi: 1
issue: '1'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '754411'
  name: ISTplus - Postdoctoral Fellowships
- _id: 2688CF98-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '801770'
  name: 'Angulon: physics and applications of a new quasiparticle'
publication: SciPost Physics
publication_identifier:
  eissn:
  - 2542-4653
publication_status: published
publisher: SciPost
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Impurities in a one-dimensional Bose gas: The flow equation approach'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 11
year: '2021'
...
---
_id: '9770'
abstract:
- lang: eng
  text: We study an effective one-dimensional quantum model that includes friction
    and spin-orbit coupling (SOC), and show that the model exhibits spin polarization
    when both terms are finite. Most important, strong spin polarization can be observed
    even for moderate SOC, provided that the friction is strong. Our findings might
    help to explain the pronounced effect of chirality on spin distribution and transport
    in chiral molecules. In particular, our model implies static magnetic properties
    of a chiral molecule, which lead to Shiba-like states when a molecule is placed
    on a superconductor, in accordance with recent experimental data.
acknowledgement: "We thank Rafael Barfknecht for useful discussions. This work has
  received funding from the European Union’s Horizon 2020 research and innovation
  programme under the Marie Skłodowska-Curie Grant Agreement No. 754411 (A.G.\r\nand
  A.G.V.). M.L. acknowledges support by the European Research Council (ERC) Starting
  Grant No. 801770 (ANGULON). Y.P. and O.M. acknowledge funding from the Nidersachsen
  Ministry of Science and Culture, and from the\r\nAcademia Sinica Research Program.
  O.M. is thankful for support through the Harry de Jur Chair in Applied Science."
article_number: '024430'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Artem
  full_name: Volosniev, Artem
  id: 37D278BC-F248-11E8-B48F-1D18A9856A87
  last_name: Volosniev
  orcid: 0000-0003-0393-5525
- first_name: Hen
  full_name: Alpern, Hen
  last_name: Alpern
- first_name: Yossi
  full_name: Paltiel, Yossi
  last_name: Paltiel
- first_name: Oded
  full_name: Millo, Oded
  last_name: Millo
- first_name: Mikhail
  full_name: Lemeshko, Mikhail
  id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
  last_name: Lemeshko
  orcid: 0000-0002-6990-7802
- first_name: Areg
  full_name: Ghazaryan, Areg
  id: 4AF46FD6-F248-11E8-B48F-1D18A9856A87
  last_name: Ghazaryan
  orcid: 0000-0001-9666-3543
citation:
  ama: Volosniev A, Alpern H, Paltiel Y, Millo O, Lemeshko M, Ghazaryan A. Interplay
    between friction and spin-orbit coupling as a source of spin polarization. <i>Physical
    Review B</i>. 2021;104(2). doi:<a href="https://doi.org/10.1103/physrevb.104.024430">10.1103/physrevb.104.024430</a>
  apa: Volosniev, A., Alpern, H., Paltiel, Y., Millo, O., Lemeshko, M., &#38; Ghazaryan,
    A. (2021). Interplay between friction and spin-orbit coupling as a source of spin
    polarization. <i>Physical Review B</i>. American Physical Society. <a href="https://doi.org/10.1103/physrevb.104.024430">https://doi.org/10.1103/physrevb.104.024430</a>
  chicago: Volosniev, Artem, Hen Alpern, Yossi Paltiel, Oded Millo, Mikhail Lemeshko,
    and Areg Ghazaryan. “Interplay between Friction and Spin-Orbit Coupling as a Source
    of Spin Polarization.” <i>Physical Review B</i>. American Physical Society, 2021.
    <a href="https://doi.org/10.1103/physrevb.104.024430">https://doi.org/10.1103/physrevb.104.024430</a>.
  ieee: A. Volosniev, H. Alpern, Y. Paltiel, O. Millo, M. Lemeshko, and A. Ghazaryan,
    “Interplay between friction and spin-orbit coupling as a source of spin polarization,”
    <i>Physical Review B</i>, vol. 104, no. 2. American Physical Society, 2021.
  ista: Volosniev A, Alpern H, Paltiel Y, Millo O, Lemeshko M, Ghazaryan A. 2021.
    Interplay between friction and spin-orbit coupling as a source of spin polarization.
    Physical Review B. 104(2), 024430.
  mla: Volosniev, Artem, et al. “Interplay between Friction and Spin-Orbit Coupling
    as a Source of Spin Polarization.” <i>Physical Review B</i>, vol. 104, no. 2,
    024430, American Physical Society, 2021, doi:<a href="https://doi.org/10.1103/physrevb.104.024430">10.1103/physrevb.104.024430</a>.
  short: A. Volosniev, H. Alpern, Y. Paltiel, O. Millo, M. Lemeshko, A. Ghazaryan,
    Physical Review B 104 (2021).
date_created: 2021-08-04T15:05:32Z
date_published: 2021-07-01T00:00:00Z
date_updated: 2023-08-10T14:27:07Z
day: '01'
department:
- _id: MiLe
doi: 10.1103/physrevb.104.024430
ec_funded: 1
external_id:
  arxiv:
  - '2101.05173'
  isi:
  - '000678780800003'
intvolume: '       104'
isi: 1
issue: '2'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2101.05173
month: '07'
oa: 1
oa_version: Preprint
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '754411'
  name: ISTplus - Postdoctoral Fellowships
- _id: 2688CF98-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '801770'
  name: 'Angulon: physics and applications of a new quasiparticle'
publication: Physical Review B
publication_identifier:
  eissn:
  - 2469-9969
  issn:
  - 2469-9950
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Interplay between friction and spin-orbit coupling as a source of spin polarization
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 104
year: '2021'
...
---
_id: '9778'
abstract:
- lang: eng
  text: The hippocampal mossy fiber synapse is a key synapse of the trisynaptic circuit.
    Post-tetanic potentiation (PTP) is the most powerful form of plasticity at this
    synaptic connection. It is widely believed that mossy fiber PTP is an entirely
    presynaptic phenomenon, implying that PTP induction is input-specific, and requires
    neither activity of multiple inputs nor stimulation of postsynaptic neurons. To
    directly test cooperativity and associativity, we made paired recordings between
    single mossy fiber terminals and postsynaptic CA3 pyramidal neurons in rat brain
    slices. By stimulating non-overlapping mossy fiber inputs converging onto single
    CA3 neurons, we confirm that PTP is input-specific and non-cooperative. Unexpectedly,
    mossy fiber PTP exhibits anti-associative induction properties. EPSCs show only
    minimal PTP after combined pre- and postsynaptic high-frequency stimulation with
    intact postsynaptic Ca2+ signaling, but marked PTP in the absence of postsynaptic
    spiking and after suppression of postsynaptic Ca2+ signaling (10 mM EGTA). PTP
    is largely recovered by inhibitors of voltage-gated R- and L-type Ca2+ channels,
    group II mGluRs, and vacuolar-type H+-ATPase, suggesting the involvement of retrograde
    vesicular glutamate signaling. Transsynaptic regulation of PTP extends the repertoire
    of synaptic computations, implementing a brake on mossy fiber detonation and a
    “smart teacher” function of hippocampal mossy fiber synapses.
acknowledged_ssus:
- _id: SSU
acknowledgement: We thank Drs. Carolina Borges-Merjane and Jose Guzman for critically
  reading the manuscript, and Pablo Castillo for discussions. We are grateful to Alois
  Schlögl for help with analysis, Florian Marr for excellent technical assistance
  and cell reconstruction, Christina Altmutter for technical help, Eleftheria Kralli-Beller
  for manuscript editing, and the Scientific Service Units of IST Austria for support.
  This project received funding from the European Research Council (ERC) under the
  European Union’s Horizon 2020 research and innovation program (grant agreement No
  692692) and the Fond zur Förderung der Wissenschaftlichen Forschung (Z 312-B27,
  Wittgenstein award), both to P.J.
article_number: '2912'
article_processing_charge: No
article_type: original
author:
- first_name: David H
  full_name: Vandael, David H
  id: 3AE48E0A-F248-11E8-B48F-1D18A9856A87
  last_name: Vandael
  orcid: 0000-0001-7577-1676
- first_name: Yuji
  full_name: Okamoto, Yuji
  id: 3337E116-F248-11E8-B48F-1D18A9856A87
  last_name: Okamoto
  orcid: 0000-0003-0408-6094
- first_name: Peter M
  full_name: Jonas, Peter M
  id: 353C1B58-F248-11E8-B48F-1D18A9856A87
  last_name: Jonas
  orcid: 0000-0001-5001-4804
citation:
  ama: Vandael DH, Okamoto Y, Jonas PM. Transsynaptic modulation of presynaptic short-term
    plasticity in hippocampal mossy fiber synapses. <i>Nature Communications</i>.
    2021;12(1). doi:<a href="https://doi.org/10.1038/s41467-021-23153-5">10.1038/s41467-021-23153-5</a>
  apa: Vandael, D. H., Okamoto, Y., &#38; Jonas, P. M. (2021). Transsynaptic modulation
    of presynaptic short-term plasticity in hippocampal mossy fiber synapses. <i>Nature
    Communications</i>. Springer. <a href="https://doi.org/10.1038/s41467-021-23153-5">https://doi.org/10.1038/s41467-021-23153-5</a>
  chicago: Vandael, David H, Yuji Okamoto, and Peter M Jonas. “Transsynaptic Modulation
    of Presynaptic Short-Term Plasticity in Hippocampal Mossy Fiber Synapses.” <i>Nature
    Communications</i>. Springer, 2021. <a href="https://doi.org/10.1038/s41467-021-23153-5">https://doi.org/10.1038/s41467-021-23153-5</a>.
  ieee: D. H. Vandael, Y. Okamoto, and P. M. Jonas, “Transsynaptic modulation of presynaptic
    short-term plasticity in hippocampal mossy fiber synapses,” <i>Nature Communications</i>,
    vol. 12, no. 1. Springer, 2021.
  ista: Vandael DH, Okamoto Y, Jonas PM. 2021. Transsynaptic modulation of presynaptic
    short-term plasticity in hippocampal mossy fiber synapses. Nature Communications.
    12(1), 2912.
  mla: Vandael, David H., et al. “Transsynaptic Modulation of Presynaptic Short-Term
    Plasticity in Hippocampal Mossy Fiber Synapses.” <i>Nature Communications</i>,
    vol. 12, no. 1, 2912, Springer, 2021, doi:<a href="https://doi.org/10.1038/s41467-021-23153-5">10.1038/s41467-021-23153-5</a>.
  short: D.H. Vandael, Y. Okamoto, P.M. Jonas, Nature Communications 12 (2021).
date_created: 2021-08-06T07:22:55Z
date_published: 2021-05-18T00:00:00Z
date_updated: 2023-08-10T14:16:16Z
day: '18'
ddc:
- '570'
department:
- _id: PeJo
doi: 10.1038/s41467-021-23153-5
ec_funded: 1
external_id:
  isi:
  - '000655481800014'
file:
- access_level: open_access
  checksum: 6036a8cdae95e1707c2a04d54e325ff4
  content_type: application/pdf
  creator: kschuh
  date_created: 2021-12-17T11:34:50Z
  date_updated: 2021-12-17T11:34:50Z
  file_id: '10563'
  file_name: 2021_NatureCommunications_Vandael.pdf
  file_size: 3108845
  relation: main_file
  success: 1
file_date_updated: 2021-12-17T11:34:50Z
has_accepted_license: '1'
intvolume: '        12'
isi: 1
issue: '1'
keyword:
- general physics and astronomy
- general biochemistry
- genetics and molecular biology
- general chemistry
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
project:
- _id: 25B7EB9E-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '692692'
  name: Biophysics and circuit function of a giant cortical glumatergic synapse
- _id: 25C5A090-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: Z00312
  name: The Wittgenstein Prize
publication: Nature Communications
publication_identifier:
  issn:
  - 2041-1723
publication_status: published
publisher: Springer
quality_controlled: '1'
related_material:
  link:
  - description: News on IST Homepage
    relation: press_release
    url: https://ist.ac.at/en/news/synaptic-transmission-not-a-one-way-street/
scopus_import: '1'
status: public
title: Transsynaptic modulation of presynaptic short-term plasticity in hippocampal
  mossy fiber synapses
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 12
year: '2021'
...
---
_id: '9787'
abstract:
- lang: eng
  text: We investigate the Fröhlich polaron model on a three-dimensional torus, and
    give a proof of the second-order quantum corrections to its ground-state energy
    in the strong-coupling limit. Compared to previous work in the confined case,
    the translational symmetry (and its breaking in the Pekar approximation) makes
    the analysis substantially more challenging.
acknowledgement: "Funding from the European Union’s Horizon 2020 research and innovation
  programme under the ERC grant agreement No 694227 is gratefully acknowledged. We
  would also like to thank Rupert Frank for many helpful discussions, especially related
  to the Gross coordinate transformation defined in Def. 4.1.\r\n"
article_number: '2101.12566'
article_processing_charge: No
arxiv: 1
author:
- first_name: Dario
  full_name: Feliciangeli, Dario
  id: 41A639AA-F248-11E8-B48F-1D18A9856A87
  last_name: Feliciangeli
  orcid: 0000-0003-0754-8530
- first_name: Robert
  full_name: Seiringer, Robert
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
citation:
  ama: 'Feliciangeli D, Seiringer R. The strongly coupled polaron on the torus: Quantum
    corrections to the Pekar asymptotics. <i>arXiv</i>.'
  apa: 'Feliciangeli, D., &#38; Seiringer, R. (n.d.). The strongly coupled polaron
    on the torus: Quantum corrections to the Pekar asymptotics. <i>arXiv</i>.'
  chicago: 'Feliciangeli, Dario, and Robert Seiringer. “The Strongly Coupled Polaron
    on the Torus: Quantum Corrections to the Pekar Asymptotics.” <i>ArXiv</i>, n.d.'
  ieee: 'D. Feliciangeli and R. Seiringer, “The strongly coupled polaron on the torus:
    Quantum corrections to the Pekar asymptotics,” <i>arXiv</i>. .'
  ista: 'Feliciangeli D, Seiringer R. The strongly coupled polaron on the torus: Quantum
    corrections to the Pekar asymptotics. arXiv, 2101.12566.'
  mla: 'Feliciangeli, Dario, and Robert Seiringer. “The Strongly Coupled Polaron on
    the Torus: Quantum Corrections to the Pekar Asymptotics.” <i>ArXiv</i>, 2101.12566.'
  short: D. Feliciangeli, R. Seiringer, ArXiv (n.d.).
date_created: 2021-08-06T08:25:57Z
date_published: 2021-02-01T00:00:00Z
date_updated: 2023-09-07T13:30:10Z
day: '01'
ddc:
- '510'
department:
- _id: RoSe
ec_funded: 1
external_id:
  arxiv:
  - '2101.12566'
has_accepted_license: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2101.12566
month: '02'
oa: 1
oa_version: Preprint
project:
- _id: 25C6DC12-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '694227'
  name: Analysis of quantum many-body systems
publication: arXiv
publication_status: submitted
related_material:
  record:
  - id: '10224'
    relation: later_version
    status: public
  - id: '9733'
    relation: dissertation_contains
    status: public
status: public
title: 'The strongly coupled polaron on the torus: Quantum corrections to the Pekar
  asymptotics'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: preprint
user_id: D865714E-FA4E-11E9-B85B-F5C5E5697425
year: '2021'
...
---
_id: '9791'
abstract:
- lang: eng
  text: We provide a definition of the effective mass for the classical polaron described
    by the Landau-Pekar equations. It is based on a novel variational principle, minimizing
    the energy functional over states with given (initial) velocity. The resulting
    formula for the polaron's effective mass agrees with the prediction by Landau
    and Pekar.
acknowledgement: We thank Herbert Spohn for helpful comments. Funding from the European
  Union’s Horizon 2020 research and innovation programme under the ERC grant agreement
  No. 694227 (D.F. and R.S.) and under the Marie Skłodowska-Curie Grant Agreement
  No. 754411 (S.R.) is gratefully acknowledged..
article_number: '2107.03720 '
article_processing_charge: No
arxiv: 1
author:
- first_name: Dario
  full_name: Feliciangeli, Dario
  id: 41A639AA-F248-11E8-B48F-1D18A9856A87
  last_name: Feliciangeli
  orcid: 0000-0003-0754-8530
- first_name: Simone Anna Elvira
  full_name: Rademacher, Simone Anna Elvira
  id: 856966FE-A408-11E9-977E-802DE6697425
  last_name: Rademacher
  orcid: 0000-0001-5059-4466
- first_name: Robert
  full_name: Seiringer, Robert
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
citation:
  ama: Feliciangeli D, Rademacher SAE, Seiringer R. The effective mass problem for
    the Landau-Pekar equations. <i>arXiv</i>.
  apa: Feliciangeli, D., Rademacher, S. A. E., &#38; Seiringer, R. (n.d.). The effective
    mass problem for the Landau-Pekar equations. <i>arXiv</i>.
  chicago: Feliciangeli, Dario, Simone Anna Elvira Rademacher, and Robert Seiringer.
    “The Effective Mass Problem for the Landau-Pekar Equations.” <i>ArXiv</i>, n.d.
  ieee: D. Feliciangeli, S. A. E. Rademacher, and R. Seiringer, “The effective mass
    problem for the Landau-Pekar equations,” <i>arXiv</i>. .
  ista: Feliciangeli D, Rademacher SAE, Seiringer R. The effective mass problem for
    the Landau-Pekar equations. arXiv, 2107.03720.
  mla: Feliciangeli, Dario, et al. “The Effective Mass Problem for the Landau-Pekar
    Equations.” <i>ArXiv</i>, 2107.03720.
  short: D. Feliciangeli, S.A.E. Rademacher, R. Seiringer, ArXiv (n.d.).
date_created: 2021-08-06T08:49:45Z
date_published: 2021-07-08T00:00:00Z
date_updated: 2024-03-06T12:30:45Z
day: '08'
ddc:
- '510'
department:
- _id: RoSe
ec_funded: 1
external_id:
  arxiv:
  - '2107.03720'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2107.03720
month: '07'
oa: 1
oa_version: Preprint
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '754411'
  name: ISTplus - Postdoctoral Fellowships
- _id: 25C6DC12-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '694227'
  name: Analysis of quantum many-body systems
publication: arXiv
publication_status: submitted
related_material:
  record:
  - id: '10755'
    relation: later_version
    status: public
  - id: '9733'
    relation: dissertation_contains
    status: public
status: public
title: The effective mass problem for the Landau-Pekar equations
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2021'
...
---
_id: '9792'
abstract:
- lang: eng
  text: 'This paper establishes new connections between many-body quantum systems,
    One-body Reduced Density Matrices Functional Theory (1RDMFT) and Optimal Transport
    (OT), by interpreting the problem of computing the ground-state energy of a finite
    dimensional composite quantum system at positive temperature as a non-commutative
    entropy regularized Optimal Transport problem. We develop a new approach to fully
    characterize the dual-primal solutions in such non-commutative setting. The mathematical
    formalism is particularly relevant in quantum chemistry: numerical realizations
    of the many-electron ground state energy can be computed via a non-commutative
    version of Sinkhorn algorithm. Our approach allows to prove convergence and robustness
    of this algorithm, which, to our best knowledge, were unknown even in the two
    marginal case. Our methods are based on careful a priori estimates in the dual
    problem, which we believe to be of independent interest. Finally, the above results
    are extended in 1RDMFT setting, where bosonic or fermionic symmetry conditions
    are enforced on the problem.'
acknowledgement: 'This work started when A.G. was visiting the Erwin Schrödinger Institute
  and then continued when D.F. and L.P visited the Theoretical Chemistry Department
  of the Vrije Universiteit Amsterdam. The authors thanks the hospitality of both
  places and, especially, P. Gori-Giorgi and K. Giesbertz for fruitful discussions
  and literature suggestions in the early state of the project. Finally, the authors
  also thanks J. Maas and R. Seiringer for their feedback and useful comments to a
  first draft of the article.  L.P. acknowledges support by the Austrian Science Fund
  (FWF), grants No W1245 and NoF65. D.F acknowledges support by the European Research
  Council (ERC) under the European Union’s Horizon 2020 research and innovation programme
  (grant agreements No 716117 and No 694227). A.G. acknowledges funding by the European
  Research Council under H2020/MSCA-IF “OTmeetsDFT” [grant ID: 795942].'
article_number: '2106.11217'
article_processing_charge: No
arxiv: 1
author:
- first_name: Dario
  full_name: Feliciangeli, Dario
  id: 41A639AA-F248-11E8-B48F-1D18A9856A87
  last_name: Feliciangeli
  orcid: 0000-0003-0754-8530
- first_name: Augusto
  full_name: Gerolin, Augusto
  last_name: Gerolin
- first_name: Lorenzo
  full_name: Portinale, Lorenzo
  id: 30AD2CBC-F248-11E8-B48F-1D18A9856A87
  last_name: Portinale
citation:
  ama: Feliciangeli D, Gerolin A, Portinale L. A non-commutative entropic optimal
    transport approach to quantum composite systems at positive temperature. <i>arXiv</i>.
    doi:<a href="https://doi.org/10.48550/arXiv.2106.11217">10.48550/arXiv.2106.11217</a>
  apa: Feliciangeli, D., Gerolin, A., &#38; Portinale, L. (n.d.). A non-commutative
    entropic optimal transport approach to quantum composite systems at positive temperature.
    <i>arXiv</i>. <a href="https://doi.org/10.48550/arXiv.2106.11217">https://doi.org/10.48550/arXiv.2106.11217</a>
  chicago: Feliciangeli, Dario, Augusto Gerolin, and Lorenzo Portinale. “A Non-Commutative
    Entropic Optimal Transport Approach to Quantum Composite Systems at Positive Temperature.”
    <i>ArXiv</i>, n.d. <a href="https://doi.org/10.48550/arXiv.2106.11217">https://doi.org/10.48550/arXiv.2106.11217</a>.
  ieee: D. Feliciangeli, A. Gerolin, and L. Portinale, “A non-commutative entropic
    optimal transport approach to quantum composite systems at positive temperature,”
    <i>arXiv</i>. .
  ista: Feliciangeli D, Gerolin A, Portinale L. A non-commutative entropic optimal
    transport approach to quantum composite systems at positive temperature. arXiv,
    2106.11217.
  mla: Feliciangeli, Dario, et al. “A Non-Commutative Entropic Optimal Transport Approach
    to Quantum Composite Systems at Positive Temperature.” <i>ArXiv</i>, 2106.11217,
    doi:<a href="https://doi.org/10.48550/arXiv.2106.11217">10.48550/arXiv.2106.11217</a>.
  short: D. Feliciangeli, A. Gerolin, L. Portinale, ArXiv (n.d.).
date_created: 2021-08-06T09:07:12Z
date_published: 2021-07-21T00:00:00Z
date_updated: 2023-11-14T13:21:01Z
day: '21'
ddc:
- '510'
department:
- _id: RoSe
- _id: JaMa
doi: 10.48550/arXiv.2106.11217
ec_funded: 1
external_id:
  arxiv:
  - '2106.11217'
has_accepted_license: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2106.11217
month: '07'
oa: 1
oa_version: Preprint
project:
- _id: 25C6DC12-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '694227'
  name: Analysis of quantum many-body systems
- _id: 256E75B8-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '716117'
  name: Optimal Transport and Stochastic Dynamics
- _id: fc31cba2-9c52-11eb-aca3-ff467d239cd2
  grant_number: F6504
  name: Taming Complexity in Partial Differential Systems
publication: arXiv
publication_status: submitted
related_material:
  record:
  - id: '9733'
    relation: dissertation_contains
    status: public
  - id: '10030'
    relation: dissertation_contains
    status: public
  - id: '12911'
    relation: later_version
    status: public
status: public
title: A non-commutative entropic optimal transport approach to quantum composite
  systems at positive temperature
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2021'
...
---
_id: '9793'
abstract:
- lang: eng
  text: Astrocytes extensively infiltrate the neuropil to regulate critical aspects
    of synaptic development and function. This process is regulated by transcellular
    interactions between astrocytes and neurons via cell adhesion molecules. How astrocytes
    coordinate developmental processes among one another to parse out the synaptic
    neuropil and form non-overlapping territories is unknown. Here we identify a molecular
    mechanism regulating astrocyte-astrocyte interactions during development to coordinate
    astrocyte morphogenesis and gap junction coupling. We show that hepaCAM, a disease-linked,
    astrocyte-enriched cell adhesion molecule, regulates astrocyte competition for
    territory and morphological complexity in the developing mouse cortex. Furthermore,
    conditional deletion of Hepacam from developing astrocytes significantly impairs
    gap junction coupling between astrocytes and disrupts the balance between synaptic
    excitation and inhibition. Mutations in HEPACAM cause megalencephalic leukoencephalopathy
    with subcortical cysts in humans. Therefore, our findings suggest that disruption
    of astrocyte self-organization mechanisms could be an underlying cause of neural
    pathology.
acknowledgement: This work was supported by the National Institutes of Health (R01
  DA047258 and R01 NS102237 to C.E., F32 NS100392 to K.T.B.) and the Holland-Trice
  Brain Research Award (to C.E.). K.T.B. was supported by postdoctoral fellowships
  from the Foerster-Bernstein Family and The Hartwell Foundation. The Hippenmeyer
  lab was supported by the European Research Council (ERC) under the European Union’s
  Horizon 2020 research and innovations program (725780 LinPro) to S.H. R.E. was supported
  by Ministerio de Ciencia y Tecnología (RTI2018-093493-B-I00). We thank the Duke
  Light Microscopy Core Facility, the Duke Transgenic Mouse Facility, Dr. U. Schulte
  for assistance with proteomic experiments, and Dr. D. Silver for critical review
  of the manuscript. Cartoon elements of figure panels were created using BioRender.com.
article_processing_charge: No
article_type: original
author:
- first_name: Katherine T.
  full_name: Baldwin, Katherine T.
  last_name: Baldwin
- first_name: Christabel X.
  full_name: Tan, Christabel X.
  last_name: Tan
- first_name: Samuel T.
  full_name: Strader, Samuel T.
  last_name: Strader
- first_name: Changyu
  full_name: Jiang, Changyu
  last_name: Jiang
- first_name: Justin T.
  full_name: Savage, Justin T.
  last_name: Savage
- first_name: Xabier
  full_name: Elorza-Vidal, Xabier
  last_name: Elorza-Vidal
- first_name: Ximena
  full_name: Contreras, Ximena
  id: 475990FE-F248-11E8-B48F-1D18A9856A87
  last_name: Contreras
- first_name: Thomas
  full_name: Rülicke, Thomas
  last_name: Rülicke
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
- first_name: Raúl
  full_name: Estévez, Raúl
  last_name: Estévez
- first_name: Ru-Rong
  full_name: Ji, Ru-Rong
  last_name: Ji
- first_name: Cagla
  full_name: Eroglu, Cagla
  last_name: Eroglu
citation:
  ama: Baldwin KT, Tan CX, Strader ST, et al. HepaCAM controls astrocyte self-organization
    and coupling. <i>Neuron</i>. 2021;109(15):2427-2442.e10. doi:<a href="https://doi.org/10.1016/j.neuron.2021.05.025">10.1016/j.neuron.2021.05.025</a>
  apa: Baldwin, K. T., Tan, C. X., Strader, S. T., Jiang, C., Savage, J. T., Elorza-Vidal,
    X., … Eroglu, C. (2021). HepaCAM controls astrocyte self-organization and coupling.
    <i>Neuron</i>. Elsevier. <a href="https://doi.org/10.1016/j.neuron.2021.05.025">https://doi.org/10.1016/j.neuron.2021.05.025</a>
  chicago: Baldwin, Katherine T., Christabel X. Tan, Samuel T. Strader, Changyu Jiang,
    Justin T. Savage, Xabier Elorza-Vidal, Ximena Contreras, et al. “HepaCAM Controls
    Astrocyte Self-Organization and Coupling.” <i>Neuron</i>. Elsevier, 2021. <a href="https://doi.org/10.1016/j.neuron.2021.05.025">https://doi.org/10.1016/j.neuron.2021.05.025</a>.
  ieee: K. T. Baldwin <i>et al.</i>, “HepaCAM controls astrocyte self-organization
    and coupling,” <i>Neuron</i>, vol. 109, no. 15. Elsevier, p. 2427–2442.e10, 2021.
  ista: Baldwin KT, Tan CX, Strader ST, Jiang C, Savage JT, Elorza-Vidal X, Contreras
    X, Rülicke T, Hippenmeyer S, Estévez R, Ji R-R, Eroglu C. 2021. HepaCAM controls
    astrocyte self-organization and coupling. Neuron. 109(15), 2427–2442.e10.
  mla: Baldwin, Katherine T., et al. “HepaCAM Controls Astrocyte Self-Organization
    and Coupling.” <i>Neuron</i>, vol. 109, no. 15, Elsevier, 2021, p. 2427–2442.e10,
    doi:<a href="https://doi.org/10.1016/j.neuron.2021.05.025">10.1016/j.neuron.2021.05.025</a>.
  short: K.T. Baldwin, C.X. Tan, S.T. Strader, C. Jiang, J.T. Savage, X. Elorza-Vidal,
    X. Contreras, T. Rülicke, S. Hippenmeyer, R. Estévez, R.-R. Ji, C. Eroglu, Neuron
    109 (2021) 2427–2442.e10.
date_created: 2021-08-06T09:08:25Z
date_published: 2021-08-04T00:00:00Z
date_updated: 2023-09-27T07:46:09Z
day: '04'
department:
- _id: SiHi
doi: 10.1016/j.neuron.2021.05.025
ec_funded: 1
external_id:
  isi:
  - '000692851900010'
  pmid:
  - '34171291'
intvolume: '       109'
isi: 1
issue: '15'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1016/j.neuron.2021.05.025
month: '08'
oa: 1
oa_version: Published Version
page: 2427-2442.e10
pmid: 1
project:
- _id: 260018B0-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '725780'
  name: Principles of Neural Stem Cell Lineage Progression in Cerebral Cortex Development
publication: Neuron
publication_identifier:
  eissn:
  - 1097-4199
  issn:
  - 0896-6273
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: HepaCAM controls astrocyte self-organization and coupling
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 109
year: '2021'
...
---
_id: '9815'
abstract:
- lang: eng
  text: The quantum bits (qubits) on which superconducting quantum computers are based
    have energy scales corresponding to photons with GHz frequencies. The energy of
    photons in the gigahertz domain is too low to allow transmission through the noisy
    room-temperature environment, where the signal would be lost in thermal noise.
    Optical photons, on the other hand, have much higher energies, and signals can
    be detected using highly efficient single-photon detectors. Transduction from
    microwave to optical frequencies is therefore a potential enabling technology
    for quantum devices. However, in such a device the optical pump can be a source
    of thermal noise and thus degrade the fidelity; the similarity of input microwave
    state to the output optical state. In order to investigate the magnitude of this
    effect we model the sub-Kelvin thermal behavior of an electro-optic transducer
    based on a lithium niobate whispering gallery mode resonator. We find that there
    is an optimum power level for a continuous pump, whilst pulsed operation of the
    pump increases the fidelity of the conversion.
acknowledgement: NJL is supported by the MBIE Endeavour Fund (UOOX1805) and GL is
  by the Julius von Haast Fellowship of New Zealand. SM acknowledges stimulating discussions
  with T M Jensen.
article_number: '045005'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Sonia
  full_name: Mobassem, Sonia
  last_name: Mobassem
- first_name: Nicholas J.
  full_name: Lambert, Nicholas J.
  last_name: Lambert
- first_name: Alfredo R
  full_name: Rueda Sanchez, Alfredo R
  id: 3B82B0F8-F248-11E8-B48F-1D18A9856A87
  last_name: Rueda Sanchez
  orcid: 0000-0001-6249-5860
- first_name: Johannes M
  full_name: Fink, Johannes M
  id: 4B591CBA-F248-11E8-B48F-1D18A9856A87
  last_name: Fink
  orcid: 0000-0001-8112-028X
- first_name: Gerd
  full_name: Leuchs, Gerd
  last_name: Leuchs
- first_name: Harald G.L.
  full_name: Schwefel, Harald G.L.
  last_name: Schwefel
citation:
  ama: Mobassem S, Lambert NJ, Rueda Sanchez AR, Fink JM, Leuchs G, Schwefel HGL.
    Thermal noise in electro-optic devices at cryogenic temperatures. <i>Quantum Science
    and Technology</i>. 2021;6(4). doi:<a href="https://doi.org/10.1088/2058-9565/ac0f36">10.1088/2058-9565/ac0f36</a>
  apa: Mobassem, S., Lambert, N. J., Rueda Sanchez, A. R., Fink, J. M., Leuchs, G.,
    &#38; Schwefel, H. G. L. (2021). Thermal noise in electro-optic devices at cryogenic
    temperatures. <i>Quantum Science and Technology</i>. IOP Publishing. <a href="https://doi.org/10.1088/2058-9565/ac0f36">https://doi.org/10.1088/2058-9565/ac0f36</a>
  chicago: Mobassem, Sonia, Nicholas J. Lambert, Alfredo R Rueda Sanchez, Johannes
    M Fink, Gerd Leuchs, and Harald G.L. Schwefel. “Thermal Noise in Electro-Optic
    Devices at Cryogenic Temperatures.” <i>Quantum Science and Technology</i>. IOP
    Publishing, 2021. <a href="https://doi.org/10.1088/2058-9565/ac0f36">https://doi.org/10.1088/2058-9565/ac0f36</a>.
  ieee: S. Mobassem, N. J. Lambert, A. R. Rueda Sanchez, J. M. Fink, G. Leuchs, and
    H. G. L. Schwefel, “Thermal noise in electro-optic devices at cryogenic temperatures,”
    <i>Quantum Science and Technology</i>, vol. 6, no. 4. IOP Publishing, 2021.
  ista: Mobassem S, Lambert NJ, Rueda Sanchez AR, Fink JM, Leuchs G, Schwefel HGL.
    2021. Thermal noise in electro-optic devices at cryogenic temperatures. Quantum
    Science and Technology. 6(4), 045005.
  mla: Mobassem, Sonia, et al. “Thermal Noise in Electro-Optic Devices at Cryogenic
    Temperatures.” <i>Quantum Science and Technology</i>, vol. 6, no. 4, 045005, IOP
    Publishing, 2021, doi:<a href="https://doi.org/10.1088/2058-9565/ac0f36">10.1088/2058-9565/ac0f36</a>.
  short: S. Mobassem, N.J. Lambert, A.R. Rueda Sanchez, J.M. Fink, G. Leuchs, H.G.L.
    Schwefel, Quantum Science and Technology 6 (2021).
date_created: 2021-08-08T22:01:25Z
date_published: 2021-07-15T00:00:00Z
date_updated: 2023-10-17T12:54:54Z
day: '15'
ddc:
- '530'
department:
- _id: JoFi
doi: 10.1088/2058-9565/ac0f36
external_id:
  arxiv:
  - '2008.08764'
  isi:
  - '000673081500001'
file:
- access_level: open_access
  checksum: b15c2c228487a75002c3b52d56f23d5c
  content_type: application/pdf
  creator: cchlebak
  date_created: 2021-08-09T12:23:13Z
  date_updated: 2021-08-09T12:23:13Z
  file_id: '9836'
  file_name: 2021_QuantumScienceTechnology_Mobassem.pdf
  file_size: 2366118
  relation: main_file
file_date_updated: 2021-08-09T12:23:13Z
has_accepted_license: '1'
intvolume: '         6'
isi: 1
issue: '4'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
publication: Quantum Science and Technology
publication_identifier:
  eissn:
  - 2058-9565
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Thermal noise in electro-optic devices at cryogenic temperatures
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 6
year: '2021'
...
---
_id: '9816'
abstract:
- lang: eng
  text: "Aims: Mass antigen testing programs have been challenged because of an alleged
    insufficient specificity, leading to a large number of false positives. The objective
    of this study is to derive a lower bound of the specificity of the SD Biosensor
    Standard Q Ag-Test in large scale practical use.\r\nMethods: Based on county data
    from the nationwide tests for SARS-CoV-2 in Slovakia between 31.10.–1.11. 2020
    we calculate a lower confidence bound for the specificity. As positive test results
    were not systematically verified by PCR tests, we base the lower bound on a worst
    case assumption, assuming all positives to be false positives.\r\nResults: 3,625,332
    persons from 79 counties were tested. The lowest positivity rate was observed
    in the county of Rožňava where 100 out of 34307 (0.29%) tests were positive. This
    implies a test specificity of at least 99.6% (97.5% one-sided lower confidence
    bound, adjusted for multiplicity).\r\nConclusion: The obtained lower bound suggests
    a higher specificity compared to earlier studies in spite of the underlying worst
    case assumption and the application in a mass testing setting. The actual specificity
    is expected to exceed 99.6% if the prevalence in the respective regions was non-negligible
    at the time of testing. To our knowledge, this estimate constitutes the first
    bound obtained from large scale practical use of an antigen test."
acknowledgement: We would like to thank Alfred Uhl, Richard Kollár and Katarína Bod’ová
  for very helpful comments. We also thank Matej Mišík for discussion and information
  regarding the Slovak testing data and Ag-Test used.
article_number: e0255267
article_processing_charge: Yes
article_type: original
author:
- first_name: Michal
  full_name: Hledik, Michal
  id: 4171253A-F248-11E8-B48F-1D18A9856A87
  last_name: Hledik
- first_name: Jitka
  full_name: Polechova, Jitka
  id: 3BBFB084-F248-11E8-B48F-1D18A9856A87
  last_name: Polechova
  orcid: 0000-0003-0951-3112
- first_name: Mathias
  full_name: Beiglböck, Mathias
  last_name: Beiglböck
- first_name: Anna Nele
  full_name: Herdina, Anna Nele
  last_name: Herdina
- first_name: Robert
  full_name: Strassl, Robert
  last_name: Strassl
- first_name: Martin
  full_name: Posch, Martin
  last_name: Posch
citation:
  ama: Hledik M, Polechova J, Beiglböck M, Herdina AN, Strassl R, Posch M. Analysis
    of the specificity of a COVID-19 antigen test in the Slovak mass testing program.
    <i>PLoS ONE</i>. 2021;16(7). doi:<a href="https://doi.org/10.1371/journal.pone.0255267">10.1371/journal.pone.0255267</a>
  apa: Hledik, M., Polechova, J., Beiglböck, M., Herdina, A. N., Strassl, R., &#38;
    Posch, M. (2021). Analysis of the specificity of a COVID-19 antigen test in the
    Slovak mass testing program. <i>PLoS ONE</i>. Public Library of Science. <a href="https://doi.org/10.1371/journal.pone.0255267">https://doi.org/10.1371/journal.pone.0255267</a>
  chicago: Hledik, Michal, Jitka Polechova, Mathias Beiglböck, Anna Nele Herdina,
    Robert Strassl, and Martin Posch. “Analysis of the Specificity of a COVID-19 Antigen
    Test in the Slovak Mass Testing Program.” <i>PLoS ONE</i>. Public Library of Science,
    2021. <a href="https://doi.org/10.1371/journal.pone.0255267">https://doi.org/10.1371/journal.pone.0255267</a>.
  ieee: M. Hledik, J. Polechova, M. Beiglböck, A. N. Herdina, R. Strassl, and M. Posch,
    “Analysis of the specificity of a COVID-19 antigen test in the Slovak mass testing
    program,” <i>PLoS ONE</i>, vol. 16, no. 7. Public Library of Science, 2021.
  ista: Hledik M, Polechova J, Beiglböck M, Herdina AN, Strassl R, Posch M. 2021.
    Analysis of the specificity of a COVID-19 antigen test in the Slovak mass testing
    program. PLoS ONE. 16(7), e0255267.
  mla: Hledik, Michal, et al. “Analysis of the Specificity of a COVID-19 Antigen Test
    in the Slovak Mass Testing Program.” <i>PLoS ONE</i>, vol. 16, no. 7, e0255267,
    Public Library of Science, 2021, doi:<a href="https://doi.org/10.1371/journal.pone.0255267">10.1371/journal.pone.0255267</a>.
  short: M. Hledik, J. Polechova, M. Beiglböck, A.N. Herdina, R. Strassl, M. Posch,
    PLoS ONE 16 (2021).
date_created: 2021-08-08T22:01:26Z
date_published: 2021-07-29T00:00:00Z
date_updated: 2023-08-10T14:26:32Z
day: '29'
ddc:
- '610'
department:
- _id: NiBa
doi: 10.1371/journal.pone.0255267
external_id:
  isi:
  - '000685248200095'
  pmid:
  - '34324553'
file:
- access_level: open_access
  checksum: ae4df60eb62f4491278588548d0c1f93
  content_type: application/pdf
  creator: asandaue
  date_created: 2021-08-09T11:52:14Z
  date_updated: 2021-08-09T11:52:14Z
  file_id: '9835'
  file_name: 2021_PLoSONE_Hledík.pdf
  file_size: 773921
  relation: main_file
  success: 1
file_date_updated: 2021-08-09T11:52:14Z
has_accepted_license: '1'
intvolume: '        16'
isi: 1
issue: '7'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
pmid: 1
publication: PLoS ONE
publication_identifier:
  eissn:
  - 1932-6203
publication_status: published
publisher: Public Library of Science
quality_controlled: '1'
scopus_import: '1'
status: public
title: Analysis of the specificity of a COVID-19 antigen test in the Slovak mass testing
  program
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 16
year: '2021'
...
---
_id: '9817'
abstract:
- lang: eng
  text: Elastic bending of initially flat slender elements allows the realization
    and economic fabrication of intriguing curved shapes. In this work, we derive
    an intuitive but rigorous geometric characterization of the design space of plane
    elastic rods with variable stiffness. It enables designers to determine which
    shapes are physically viable with active bending by visual inspection alone. Building
    on these insights, we propose a method for efficiently designing the geometry
    of a flat elastic rod that realizes a target equilibrium curve, which only requires
    solving a linear program. We implement this method in an interactive computational
    design tool that gives feedback about the feasibility of a design, and computes
    the geometry of the structural elements necessary to realize it within an instant.
    The tool also offers an iterative optimization routine that improves the fabricability
    of a model while modifying it as little as possible. In addition, we use our geometric
    characterization to derive an algorithm for analyzing and recovering the stability
    of elastic curves that would otherwise snap out of their unstable equilibrium
    shapes by buckling. We show the efficacy of our approach by designing and manufacturing
    several physical models that are assembled from flat elements.
acknowledgement: "We thank the anonymous reviewers for their generous feedback, and
  Michal Piovarči for his help in producing the supplemental video. This project has
  received funding from the European Research Council (ERC) under the European Union’s
  Horizon 2020 research and innovation programme (grant agreement No 715767).\r\n"
article_number: '126'
article_processing_charge: No
article_type: original
author:
- first_name: Christian
  full_name: Hafner, Christian
  id: 400429CC-F248-11E8-B48F-1D18A9856A87
  last_name: Hafner
- first_name: Bernd
  full_name: Bickel, Bernd
  id: 49876194-F248-11E8-B48F-1D18A9856A87
  last_name: Bickel
  orcid: 0000-0001-6511-9385
citation:
  ama: Hafner C, Bickel B. The design space of plane elastic curves. <i>ACM Transactions
    on Graphics</i>. 2021;40(4). doi:<a href="https://doi.org/10.1145/3450626.3459800">10.1145/3450626.3459800</a>
  apa: 'Hafner, C., &#38; Bickel, B. (2021). The design space of plane elastic curves.
    <i>ACM Transactions on Graphics</i>. Virtual: Association for Computing Machinery.
    <a href="https://doi.org/10.1145/3450626.3459800">https://doi.org/10.1145/3450626.3459800</a>'
  chicago: Hafner, Christian, and Bernd Bickel. “The Design Space of Plane Elastic
    Curves.” <i>ACM Transactions on Graphics</i>. Association for Computing Machinery,
    2021. <a href="https://doi.org/10.1145/3450626.3459800">https://doi.org/10.1145/3450626.3459800</a>.
  ieee: C. Hafner and B. Bickel, “The design space of plane elastic curves,” <i>ACM
    Transactions on Graphics</i>, vol. 40, no. 4. Association for Computing Machinery,
    2021.
  ista: Hafner C, Bickel B. 2021. The design space of plane elastic curves. ACM Transactions
    on Graphics. 40(4), 126.
  mla: Hafner, Christian, and Bernd Bickel. “The Design Space of Plane Elastic Curves.”
    <i>ACM Transactions on Graphics</i>, vol. 40, no. 4, 126, Association for Computing
    Machinery, 2021, doi:<a href="https://doi.org/10.1145/3450626.3459800">10.1145/3450626.3459800</a>.
  short: C. Hafner, B. Bickel, ACM Transactions on Graphics 40 (2021).
conference:
  end_date: 2021-08-13
  location: Virtual
  name: 'SIGGRAF: Special Interest Group on Computer Graphics and Interactive Techniques'
  start_date: 2021-08-09
date_created: 2021-08-08T22:01:26Z
date_published: 2021-07-19T00:00:00Z
date_updated: 2024-03-25T23:30:26Z
day: '19'
ddc:
- '516'
department:
- _id: BeBi
doi: 10.1145/3450626.3459800
ec_funded: 1
external_id:
  isi:
  - '000674930900091'
file:
- access_level: open_access
  checksum: 7e5d08ce46b0451b3102eacd3d00f85f
  content_type: application/pdf
  creator: chafner
  date_created: 2021-10-18T10:42:15Z
  date_updated: 2021-10-18T10:42:15Z
  file_id: '10150'
  file_name: elastic-curves-paper.pdf
  file_size: 17064290
  relation: main_file
  success: 1
- access_level: open_access
  checksum: 0088643478be7c01a703b5b10767348f
  content_type: application/pdf
  creator: chafner
  date_created: 2021-10-18T10:42:22Z
  date_updated: 2021-10-18T10:42:22Z
  file_id: '10151'
  file_name: elastic-curves-supp.pdf
  file_size: 547156
  relation: supplementary_material
file_date_updated: 2021-10-18T10:42:22Z
has_accepted_license: '1'
intvolume: '        40'
isi: 1
issue: '4'
keyword:
- Computing methodologies
- shape modeling
- modeling and simulation
- theory of computation
- computational geometry
- mathematics of computing
- mathematical optimization
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
project:
- _id: 24F9549A-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '715767'
  name: 'MATERIALIZABLE: Intelligent fabrication-oriented Computational Design and
    Modeling'
publication: ACM Transactions on Graphics
publication_identifier:
  eissn:
  - 1557-7368
  issn:
  - 0730-0301
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
related_material:
  link:
  - description: News on IST Website
    relation: press_release
    url: https://ist.ac.at/en/news/designing-with-elastic-structures/
  record:
  - id: '12897'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: The design space of plane elastic curves
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 40
year: '2021'
...
---
_id: '9818'
abstract:
- lang: eng
  text: Triangle mesh-based simulations are able to produce satisfying animations
    of knitted and woven cloth; however, they lack the rich geometric detail of yarn-level
    simulations. Naive texturing approaches do not consider yarn-level physics, while
    full yarn-level simulations may become prohibitively expensive for large garments.
    We propose a method to animate yarn-level cloth geometry on top of an underlying
    deforming mesh in a mechanics-aware fashion. Using triangle strains to interpolate
    precomputed yarn geometry, we are able to reproduce effects such as knit loops
    tightening under stretching. In combination with precomputed mesh animation or
    real-time mesh simulation, our method is able to animate yarn-level cloth in real-time
    at large scales.
acknowledged_ssus:
- _id: ScienComp
acknowledgement: "We wish to thank the anonymous reviewers and the members of the
  Visual Computing Group at IST Austria for their valuable feedback. We also thank
  Seddi Labs for providing the garment model with fold-over seams.\r\nThis research
  was supported by the Scientific Service Units (SSU) of IST Austria through resources
  provided by Scientific\r\nComputing. This project has received funding from the
  European Research Council (ERC) under the European Union’s Horizon 2020 research
  and innovation programme under grant agreement No. 638176. Rahul Narain is supported
  by a Pankaj Gupta Young Faculty Fellowship and a gift from Adobe Inc."
article_number: '168'
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Georg
  full_name: Sperl, Georg
  id: 4DD40360-F248-11E8-B48F-1D18A9856A87
  last_name: Sperl
- first_name: Rahul
  full_name: Narain, Rahul
  last_name: Narain
- first_name: Christopher J
  full_name: Wojtan, Christopher J
  id: 3C61F1D2-F248-11E8-B48F-1D18A9856A87
  last_name: Wojtan
  orcid: 0000-0001-6646-5546
citation:
  ama: Sperl G, Narain R, Wojtan C. Mechanics-aware deformation of yarn pattern geometry.
    <i>ACM Transactions on Graphics</i>. 2021;40(4). doi:<a href="https://doi.org/10.1145/3450626.3459816">10.1145/3450626.3459816</a>
  apa: Sperl, G., Narain, R., &#38; Wojtan, C. (2021). Mechanics-aware deformation
    of yarn pattern geometry. <i>ACM Transactions on Graphics</i>. Association for
    Computing Machinery. <a href="https://doi.org/10.1145/3450626.3459816">https://doi.org/10.1145/3450626.3459816</a>
  chicago: Sperl, Georg, Rahul Narain, and Chris Wojtan. “Mechanics-Aware Deformation
    of Yarn Pattern Geometry.” <i>ACM Transactions on Graphics</i>. Association for
    Computing Machinery, 2021. <a href="https://doi.org/10.1145/3450626.3459816">https://doi.org/10.1145/3450626.3459816</a>.
  ieee: G. Sperl, R. Narain, and C. Wojtan, “Mechanics-aware deformation of yarn pattern
    geometry,” <i>ACM Transactions on Graphics</i>, vol. 40, no. 4. Association for
    Computing Machinery, 2021.
  ista: Sperl G, Narain R, Wojtan C. 2021. Mechanics-aware deformation of yarn pattern
    geometry. ACM Transactions on Graphics. 40(4), 168.
  mla: Sperl, Georg, et al. “Mechanics-Aware Deformation of Yarn Pattern Geometry.”
    <i>ACM Transactions on Graphics</i>, vol. 40, no. 4, 168, Association for Computing
    Machinery, 2021, doi:<a href="https://doi.org/10.1145/3450626.3459816">10.1145/3450626.3459816</a>.
  short: G. Sperl, R. Narain, C. Wojtan, ACM Transactions on Graphics 40 (2021).
date_created: 2021-08-08T22:01:27Z
date_published: 2021-08-01T00:00:00Z
date_updated: 2023-08-10T14:24:36Z
day: '01'
department:
- _id: GradSch
- _id: ChWo
doi: 10.1145/3450626.3459816
ec_funded: 1
external_id:
  isi:
  - '000674930900132'
intvolume: '        40'
isi: 1
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1145/3450626.3459816
month: '08'
oa: 1
oa_version: Published Version
project:
- _id: 2533E772-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '638176'
  name: Efficient Simulation of Natural Phenomena at Extremely Large Scales
publication: ACM Transactions on Graphics
publication_identifier:
  eissn:
  - '15577368'
  issn:
  - '07300301'
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
related_material:
  link:
  - description: News on IST Webpage
    relation: press_release
    url: https://ist.ac.at/en/news/knitting-virtual-yarn/
  record:
  - id: '12358'
    relation: dissertation_contains
    status: public
  - id: '9327'
    relation: software
    status: public
scopus_import: '1'
status: public
title: Mechanics-aware deformation of yarn pattern geometry
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 40
year: '2021'
...
---
_id: '9819'
abstract:
- lang: eng
  text: Photorealistic editing of head portraits is a challenging task as humans are
    very sensitive to inconsistencies in faces. We present an approach for high-quality
    intuitive editing of the camera viewpoint and scene illumination (parameterised
    with an environment map) in a portrait image. This requires our method to capture
    and control the full reflectance field of the person in the image. Most editing
    approaches rely on supervised learning using training data captured with setups
    such as light and camera stages. Such datasets are expensive to acquire, not readily
    available and do not capture all the rich variations of in-the-wild portrait images.
    In addition, most supervised approaches only focus on relighting, and do not allow
    camera viewpoint editing. Thus, they only capture and control a subset of the
    reflectance field. Recently, portrait editing has been demonstrated by operating
    in the generative model space of StyleGAN. While such approaches do not require
    direct supervision, there is a significant loss of quality when compared to the
    supervised approaches. In this paper, we present a method which learns from limited
    supervised training data. The training images only include people in a fixed neutral
    expression with eyes closed, without much hair or background variations. Each
    person is captured under 150 one-light-at-a-time conditions and under 8 camera
    poses. Instead of training directly in the image space, we design a supervised
    problem which learns transformations in the latent space of StyleGAN. This combines
    the best of supervised learning and generative adversarial modeling. We show that
    the StyleGAN prior allows for generalisation to different expressions, hairstyles
    and backgrounds. This produces high-quality photorealistic results for in-the-wild
    images and significantly outperforms existing methods. Our approach can edit the
    illumination and pose simultaneously, and runs at interactive rates.
acknowledgement: This work was supported by the ERC Consolidator Grant 4DReply (770784).
  We also acknowledge support from Technicolor and InterDigital. We thank Tiancheng
  Sun for kindly helping us with the comparisons with Sun et al. [2019].
article_number: '44'
article_processing_charge: Yes (in subscription journal)
article_type: original
arxiv: 1
author:
- first_name: B. R.
  full_name: Mallikarjun, B. R.
  last_name: Mallikarjun
- first_name: Ayush
  full_name: Tewari, Ayush
  last_name: Tewari
- first_name: Abdallah
  full_name: Dib, Abdallah
  last_name: Dib
- first_name: Tim
  full_name: Weyrich, Tim
  last_name: Weyrich
- first_name: Bernd
  full_name: Bickel, Bernd
  id: 49876194-F248-11E8-B48F-1D18A9856A87
  last_name: Bickel
  orcid: 0000-0001-6511-9385
- first_name: Hans Peter
  full_name: Seidel, Hans Peter
  last_name: Seidel
- first_name: Hanspeter
  full_name: Pfister, Hanspeter
  last_name: Pfister
- first_name: Wojciech
  full_name: Matusik, Wojciech
  last_name: Matusik
- first_name: Louis
  full_name: Chevallier, Louis
  last_name: Chevallier
- first_name: Mohamed A.
  full_name: Elgharib, Mohamed A.
  last_name: Elgharib
- first_name: Christian
  full_name: Theobalt, Christian
  last_name: Theobalt
citation:
  ama: 'Mallikarjun BR, Tewari A, Dib A, et al. PhotoApp: Photorealistic appearance
    editing of head portraits. <i>ACM Transactions on Graphics</i>. 2021;40(4). doi:<a
    href="https://doi.org/10.1145/3450626.3459765">10.1145/3450626.3459765</a>'
  apa: 'Mallikarjun, B. R., Tewari, A., Dib, A., Weyrich, T., Bickel, B., Seidel,
    H. P., … Theobalt, C. (2021). PhotoApp: Photorealistic appearance editing of head
    portraits. <i>ACM Transactions on Graphics</i>. Association for Computing Machinery.
    <a href="https://doi.org/10.1145/3450626.3459765">https://doi.org/10.1145/3450626.3459765</a>'
  chicago: 'Mallikarjun, B. R., Ayush Tewari, Abdallah Dib, Tim Weyrich, Bernd Bickel,
    Hans Peter Seidel, Hanspeter Pfister, et al. “PhotoApp: Photorealistic Appearance
    Editing of Head Portraits.” <i>ACM Transactions on Graphics</i>. Association for
    Computing Machinery, 2021. <a href="https://doi.org/10.1145/3450626.3459765">https://doi.org/10.1145/3450626.3459765</a>.'
  ieee: 'B. R. Mallikarjun <i>et al.</i>, “PhotoApp: Photorealistic appearance editing
    of head portraits,” <i>ACM Transactions on Graphics</i>, vol. 40, no. 4. Association
    for Computing Machinery, 2021.'
  ista: 'Mallikarjun BR, Tewari A, Dib A, Weyrich T, Bickel B, Seidel HP, Pfister
    H, Matusik W, Chevallier L, Elgharib MA, Theobalt C. 2021. PhotoApp: Photorealistic
    appearance editing of head portraits. ACM Transactions on Graphics. 40(4), 44.'
  mla: 'Mallikarjun, B. R., et al. “PhotoApp: Photorealistic Appearance Editing of
    Head Portraits.” <i>ACM Transactions on Graphics</i>, vol. 40, no. 4, 44, Association
    for Computing Machinery, 2021, doi:<a href="https://doi.org/10.1145/3450626.3459765">10.1145/3450626.3459765</a>.'
  short: B.R. Mallikarjun, A. Tewari, A. Dib, T. Weyrich, B. Bickel, H.P. Seidel,
    H. Pfister, W. Matusik, L. Chevallier, M.A. Elgharib, C. Theobalt, ACM Transactions
    on Graphics 40 (2021).
date_created: 2021-08-08T22:01:27Z
date_published: 2021-08-01T00:00:00Z
date_updated: 2023-08-10T14:25:08Z
day: '01'
ddc:
- '000'
department:
- _id: BeBi
doi: 10.1145/3450626.3459765
external_id:
  arxiv:
  - '2103.07658'
  isi:
  - '000674930900011'
file:
- access_level: open_access
  checksum: 51b61b7e5c175e2d7ed8fa3b35f7525a
  content_type: application/pdf
  creator: asandaue
  date_created: 2021-08-09T11:41:50Z
  date_updated: 2021-08-09T11:41:50Z
  file_id: '9834'
  file_name: 2021_ACMTransactionsOnGraphics_Mallikarjun.pdf
  file_size: 49840741
  relation: main_file
  success: 1
file_date_updated: 2021-08-09T11:41:50Z
has_accepted_license: '1'
intvolume: '        40'
isi: 1
issue: '4'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
publication: ACM Transactions on Graphics
publication_identifier:
  eissn:
  - '15577368'
  issn:
  - '07300301'
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'PhotoApp: Photorealistic appearance editing of head portraits'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 40
year: '2021'
...
---
_id: '9820'
abstract:
- lang: eng
  text: Material appearance hinges on material reflectance properties but also surface
    geometry and illumination. The unlimited number of potential combinations between
    these factors makes understanding and predicting material appearance a very challenging
    task. In this work, we collect a large-scale dataset of perceptual ratings of
    appearance attributes with more than 215,680 responses for 42,120 distinct combinations
    of material, shape, and illumination. The goal of this dataset is twofold. First,
    we analyze for the first time the effects of illumination and geometry in material
    perception across such a large collection of varied appearances. We connect our
    findings to those of the literature, discussing how previous knowledge generalizes
    across very diverse materials, shapes, and illuminations. Second, we use the collected
    dataset to train a deep learning architecture for predicting perceptual attributes
    that correlate with human judgments. We demonstrate the consistent and robust
    behavior of our predictor in various challenging scenarios, which, for the first
    time, enables estimating perceived material attributes from general 2D images.
    Since our predictor relies on the final appearance in an image, it can compare
    appearance properties across different geometries and illumination conditions.
    Finally, we demonstrate several applications that use our predictor, including
    appearance reproduction using 3D printing, BRDF editing by integrating our predictor
    in a differentiable renderer, illumination design, or material recommendations
    for scene design.
acknowledgement: This project has received funding from the European Union’s Horizon
  2020 research and innovation programme under the Marie Skłodowska-Curie, grant agreement
  Nº 765911 (RealVision) and from the European Research Council (ERC), grant agreement
  Nº 804226 (PERDY).
article_number: '125'
article_processing_charge: No
article_type: original
author:
- first_name: Ana
  full_name: Serrano, Ana
  last_name: Serrano
- first_name: Bin
  full_name: Chen, Bin
  last_name: Chen
- first_name: Chao
  full_name: Wang, Chao
  last_name: Wang
- first_name: Michael
  full_name: Piovarci, Michael
  id: 62E473F4-5C99-11EA-A40E-AF823DDC885E
  last_name: Piovarci
  orcid: 0000-0002-5062-4474
- first_name: Hans Peter
  full_name: Seidel, Hans Peter
  last_name: Seidel
- first_name: Piotr
  full_name: Didyk, Piotr
  last_name: Didyk
- first_name: Karol
  full_name: Myszkowski, Karol
  last_name: Myszkowski
citation:
  ama: 'Serrano A, Chen B, Wang C, et al. The effect of shape and illumination on
    material perception: Model and applications. <i>ACM Transactions on Graphics</i>.
    2021;40(4). doi:<a href="https://doi.org/10.1145/3450626.3459813">10.1145/3450626.3459813</a>'
  apa: 'Serrano, A., Chen, B., Wang, C., Piovarci, M., Seidel, H. P., Didyk, P., &#38;
    Myszkowski, K. (2021). The effect of shape and illumination on material perception:
    Model and applications. <i>ACM Transactions on Graphics</i>. Association for Computing
    Machinery. <a href="https://doi.org/10.1145/3450626.3459813">https://doi.org/10.1145/3450626.3459813</a>'
  chicago: 'Serrano, Ana, Bin Chen, Chao Wang, Michael Piovarci, Hans Peter Seidel,
    Piotr Didyk, and Karol Myszkowski. “The Effect of Shape and Illumination on Material
    Perception: Model and Applications.” <i>ACM Transactions on Graphics</i>. Association
    for Computing Machinery, 2021. <a href="https://doi.org/10.1145/3450626.3459813">https://doi.org/10.1145/3450626.3459813</a>.'
  ieee: 'A. Serrano <i>et al.</i>, “The effect of shape and illumination on material
    perception: Model and applications,” <i>ACM Transactions on Graphics</i>, vol.
    40, no. 4. Association for Computing Machinery, 2021.'
  ista: 'Serrano A, Chen B, Wang C, Piovarci M, Seidel HP, Didyk P, Myszkowski K.
    2021. The effect of shape and illumination on material perception: Model and applications.
    ACM Transactions on Graphics. 40(4), 125.'
  mla: 'Serrano, Ana, et al. “The Effect of Shape and Illumination on Material Perception:
    Model and Applications.” <i>ACM Transactions on Graphics</i>, vol. 40, no. 4,
    125, Association for Computing Machinery, 2021, doi:<a href="https://doi.org/10.1145/3450626.3459813">10.1145/3450626.3459813</a>.'
  short: A. Serrano, B. Chen, C. Wang, M. Piovarci, H.P. Seidel, P. Didyk, K. Myszkowski,
    ACM Transactions on Graphics 40 (2021).
date_created: 2021-08-08T22:01:28Z
date_published: 2021-08-01T00:00:00Z
date_updated: 2023-08-10T14:20:10Z
day: '01'
department:
- _id: BeBi
doi: 10.1145/3450626.3459813
external_id:
  isi:
  - '000674930900090'
intvolume: '        40'
isi: 1
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://zaguan.unizar.es/record/110704/files/texto_completo.pdf
month: '08'
oa: 1
oa_version: Submitted Version
publication: ACM Transactions on Graphics
publication_identifier:
  eissn:
  - '15577368'
  issn:
  - '07300301'
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'The effect of shape and illumination on material perception: Model and applications'
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 40
year: '2021'
...
---
_id: '9821'
abstract:
- lang: eng
  text: Heart rate variability (hrv) is a physiological phenomenon of the variation
    in the length of the time interval between consecutive heartbeats. In many cases
    it could be an indicator of the development of pathological states. The classical
    approach to the analysis of hrv includes time domain methods and frequency domain
    methods. However, attempts are still being made to define new and more effective
    hrv assessment tools. Persistent homology is a novel data analysis tool developed
    in the recent decades that is rooted at algebraic topology. The Topological Data
    Analysis (TDA) approach focuses on examining the shape of the data in terms of
    connectedness and holes, and has recently proved to be very effective in various
    fields of research. In this paper we propose the use of persistent homology to
    the hrv analysis. We recall selected topological descriptors used in the literature
    and we introduce some new topological descriptors that reflect the specificity
    of hrv, and we discuss their relation to the standard hrv measures. In particular,
    we show that this novel approach provides a collection of indices that might be
    at least as useful as the classical parameters in differentiating between series
    of beat-to-beat intervals (RR-intervals) in healthy subjects and patients suffering
    from a stroke episode.
acknowledgement: We express our gratitude to the anonymous referees who provided constructive
  comments that helped us improve the quality of the paper.
article_number: e0253851
article_processing_charge: Yes
article_type: original
author:
- first_name: Grzegorz
  full_name: Graff, Grzegorz
  last_name: Graff
- first_name: Beata
  full_name: Graff, Beata
  last_name: Graff
- first_name: Pawel
  full_name: Pilarczyk, Pawel
  id: 3768D56A-F248-11E8-B48F-1D18A9856A87
  last_name: Pilarczyk
- first_name: Grzegorz
  full_name: Jablonski, Grzegorz
  id: 4483EF78-F248-11E8-B48F-1D18A9856A87
  last_name: Jablonski
  orcid: 0000-0002-3536-9866
- first_name: Dariusz
  full_name: Gąsecki, Dariusz
  last_name: Gąsecki
- first_name: Krzysztof
  full_name: Narkiewicz, Krzysztof
  last_name: Narkiewicz
citation:
  ama: Graff G, Graff B, Pilarczyk P, Jablonski G, Gąsecki D, Narkiewicz K. Persistent
    homology as a new method of the assessment of heart rate variability. <i>PLoS
    ONE</i>. 2021;16(7). doi:<a href="https://doi.org/10.1371/journal.pone.0253851">10.1371/journal.pone.0253851</a>
  apa: Graff, G., Graff, B., Pilarczyk, P., Jablonski, G., Gąsecki, D., &#38; Narkiewicz,
    K. (2021). Persistent homology as a new method of the assessment of heart rate
    variability. <i>PLoS ONE</i>. Public Library of Science. <a href="https://doi.org/10.1371/journal.pone.0253851">https://doi.org/10.1371/journal.pone.0253851</a>
  chicago: Graff, Grzegorz, Beata Graff, Pawel Pilarczyk, Grzegorz Jablonski, Dariusz
    Gąsecki, and Krzysztof Narkiewicz. “Persistent Homology as a New Method of the
    Assessment of Heart Rate Variability.” <i>PLoS ONE</i>. Public Library of Science,
    2021. <a href="https://doi.org/10.1371/journal.pone.0253851">https://doi.org/10.1371/journal.pone.0253851</a>.
  ieee: G. Graff, B. Graff, P. Pilarczyk, G. Jablonski, D. Gąsecki, and K. Narkiewicz,
    “Persistent homology as a new method of the assessment of heart rate variability,”
    <i>PLoS ONE</i>, vol. 16, no. 7. Public Library of Science, 2021.
  ista: Graff G, Graff B, Pilarczyk P, Jablonski G, Gąsecki D, Narkiewicz K. 2021.
    Persistent homology as a new method of the assessment of heart rate variability.
    PLoS ONE. 16(7), e0253851.
  mla: Graff, Grzegorz, et al. “Persistent Homology as a New Method of the Assessment
    of Heart Rate Variability.” <i>PLoS ONE</i>, vol. 16, no. 7, e0253851, Public
    Library of Science, 2021, doi:<a href="https://doi.org/10.1371/journal.pone.0253851">10.1371/journal.pone.0253851</a>.
  short: G. Graff, B. Graff, P. Pilarczyk, G. Jablonski, D. Gąsecki, K. Narkiewicz,
    PLoS ONE 16 (2021).
date_created: 2021-08-08T22:01:28Z
date_published: 2021-07-01T00:00:00Z
date_updated: 2023-08-10T14:21:42Z
day: '01'
ddc:
- '006'
department:
- _id: HeEd
doi: 10.1371/journal.pone.0253851
external_id:
  isi:
  - '000678124900050'
  pmid:
  - '34292957'
file:
- access_level: open_access
  checksum: 0277aa155d5db1febd2cb384768bba5f
  content_type: application/pdf
  creator: asandaue
  date_created: 2021-08-09T09:25:41Z
  date_updated: 2021-08-09T09:25:41Z
  file_id: '9832'
  file_name: 2021_PLoSONE_Graff.pdf
  file_size: 2706919
  relation: main_file
  success: 1
file_date_updated: 2021-08-09T09:25:41Z
has_accepted_license: '1'
intvolume: '        16'
isi: 1
issue: '7'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
pmid: 1
publication: PLoS ONE
publication_identifier:
  eissn:
  - '19326203'
publication_status: published
publisher: Public Library of Science
quality_controlled: '1'
scopus_import: '1'
status: public
title: Persistent homology as a new method of the assessment of heart rate variability
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 16
year: '2021'
...
---
_id: '9822'
abstract:
- lang: eng
  text: Attachment of adhesive molecules on cell culture surfaces to restrict cell
    adhesion to defined areas and shapes has been vital for the progress of in vitro
    research. In currently existing patterning methods, a combination of pattern properties
    such as stability, precision, specificity, high-throughput outcome, and spatiotemporal
    control is highly desirable but challenging to achieve. Here, we introduce a versatile
    and high-throughput covalent photoimmobilization technique, comprising a light-dose-dependent
    patterning step and a subsequent functionalization of the pattern via click chemistry.
    This two-step process is feasible on arbitrary surfaces and allows for generation
    of sustainable patterns and gradients. The method is validated in different biological
    systems by patterning adhesive ligands on cell-repellent surfaces, thereby constraining
    the growth and migration of cells to the designated areas. We then implement a
    sequential photopatterning approach by adding a second switchable patterning step,
    allowing for spatiotemporal control over two distinct surface patterns. As a proof
    of concept, we reconstruct the dynamics of the tip/stalk cell switch during angiogenesis.
    Our results show that the spatiotemporal control provided by our “sequential photopatterning”
    system is essential for mimicking dynamic biological processes and that our innovative
    approach has great potential for further applications in cell science.
acknowledgement: We would like to thank Charlott Leu for the production of our chromium
  wafers, Louise Ritter for her contribution of the IF stainings in Figure 4, Shokoufeh
  Teymouri for her help with the Bioinert coated slides, and finally Prof. Dr. Joachim
  Rädler for his valuable scientific guidance.
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Themistoklis
  full_name: Zisis, Themistoklis
  last_name: Zisis
- first_name: Jan
  full_name: Schwarz, Jan
  id: 346C1EC6-F248-11E8-B48F-1D18A9856A87
  last_name: Schwarz
- first_name: Miriam
  full_name: Balles, Miriam
  last_name: Balles
- first_name: Maibritt
  full_name: Kretschmer, Maibritt
  last_name: Kretschmer
- first_name: Maria
  full_name: Nemethova, Maria
  id: 34E27F1C-F248-11E8-B48F-1D18A9856A87
  last_name: Nemethova
- first_name: Remy P
  full_name: Chait, Remy P
  id: 3464AE84-F248-11E8-B48F-1D18A9856A87
  last_name: Chait
  orcid: 0000-0003-0876-3187
- first_name: Robert
  full_name: Hauschild, Robert
  id: 4E01D6B4-F248-11E8-B48F-1D18A9856A87
  last_name: Hauschild
  orcid: 0000-0001-9843-3522
- first_name: Janina
  full_name: Lange, Janina
  last_name: Lange
- first_name: Calin C
  full_name: Guet, Calin C
  id: 47F8433E-F248-11E8-B48F-1D18A9856A87
  last_name: Guet
  orcid: 0000-0001-6220-2052
- first_name: Michael K
  full_name: Sixt, Michael K
  id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87
  last_name: Sixt
  orcid: 0000-0002-4561-241X
- first_name: Stefan
  full_name: Zahler, Stefan
  last_name: Zahler
citation:
  ama: Zisis T, Schwarz J, Balles M, et al. Sequential and switchable patterning for
    studying cellular processes under spatiotemporal control. <i>ACS Applied Materials
    and Interfaces</i>. 2021;13(30):35545–35560. doi:<a href="https://doi.org/10.1021/acsami.1c09850">10.1021/acsami.1c09850</a>
  apa: Zisis, T., Schwarz, J., Balles, M., Kretschmer, M., Nemethova, M., Chait, R.
    P., … Zahler, S. (2021). Sequential and switchable patterning for studying cellular
    processes under spatiotemporal control. <i>ACS Applied Materials and Interfaces</i>.
    American Chemical Society. <a href="https://doi.org/10.1021/acsami.1c09850">https://doi.org/10.1021/acsami.1c09850</a>
  chicago: Zisis, Themistoklis, Jan Schwarz, Miriam Balles, Maibritt Kretschmer, Maria
    Nemethova, Remy P Chait, Robert Hauschild, et al. “Sequential and Switchable Patterning
    for Studying Cellular Processes under Spatiotemporal Control.” <i>ACS Applied
    Materials and Interfaces</i>. American Chemical Society, 2021. <a href="https://doi.org/10.1021/acsami.1c09850">https://doi.org/10.1021/acsami.1c09850</a>.
  ieee: T. Zisis <i>et al.</i>, “Sequential and switchable patterning for studying
    cellular processes under spatiotemporal control,” <i>ACS Applied Materials and
    Interfaces</i>, vol. 13, no. 30. American Chemical Society, pp. 35545–35560, 2021.
  ista: Zisis T, Schwarz J, Balles M, Kretschmer M, Nemethova M, Chait RP, Hauschild
    R, Lange J, Guet CC, Sixt MK, Zahler S. 2021. Sequential and switchable patterning
    for studying cellular processes under spatiotemporal control. ACS Applied Materials
    and Interfaces. 13(30), 35545–35560.
  mla: Zisis, Themistoklis, et al. “Sequential and Switchable Patterning for Studying
    Cellular Processes under Spatiotemporal Control.” <i>ACS Applied Materials and
    Interfaces</i>, vol. 13, no. 30, American Chemical Society, 2021, pp. 35545–35560,
    doi:<a href="https://doi.org/10.1021/acsami.1c09850">10.1021/acsami.1c09850</a>.
  short: T. Zisis, J. Schwarz, M. Balles, M. Kretschmer, M. Nemethova, R.P. Chait,
    R. Hauschild, J. Lange, C.C. Guet, M.K. Sixt, S. Zahler, ACS Applied Materials
    and Interfaces 13 (2021) 35545–35560.
date_created: 2021-08-08T22:01:28Z
date_published: 2021-08-04T00:00:00Z
date_updated: 2023-08-10T14:22:48Z
day: '04'
ddc:
- '620'
- '570'
department:
- _id: MiSi
- _id: GaTk
- _id: Bio
- _id: CaGu
doi: 10.1021/acsami.1c09850
ec_funded: 1
external_id:
  isi:
  - '000683741400026'
  pmid:
  - '34283577'
file:
- access_level: open_access
  checksum: b043a91d9f9200e467b970b692687ed3
  content_type: application/pdf
  creator: asandaue
  date_created: 2021-08-09T09:44:03Z
  date_updated: 2021-08-09T09:44:03Z
  file_id: '9833'
  file_name: 2021_ACSAppliedMaterialsAndInterfaces_Zisis.pdf
  file_size: 7123293
  relation: main_file
  success: 1
file_date_updated: 2021-08-09T09:44:03Z
has_accepted_license: '1'
intvolume: '        13'
isi: 1
issue: '30'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
page: 35545–35560
pmid: 1
project:
- _id: 25FE9508-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '724373'
  name: Cellular navigation along spatial gradients
publication: ACS Applied Materials and Interfaces
publication_identifier:
  eissn:
  - '19448252'
  issn:
  - '19448244'
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Sequential and switchable patterning for studying cellular processes under
  spatiotemporal control
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 13
year: '2021'
...
---
_id: '9823'
abstract:
- lang: eng
  text: "Approximate agreement is one of the few variants of consensus that can be
    solved in a wait-free manner in asynchronous systems where processes communicate
    by reading and writing to shared memory. In this work, we consider a natural generalisation
    of approximate agreement on arbitrary undirected connected graphs. Each process
    is given a vertex of the graph as input and, if non-faulty, must output a vertex
    such that\r\nall the outputs are within distance 1 of one another, and\r\n\r\neach
    output value lies on a shortest path between two input values.\r\n\r\nFrom prior
    work, it is known that there is no wait-free algorithm among   \U0001D45B≥3  processes
    for this problem on any cycle of length   \U0001D450≥4 , by reduction from 2-set
    agreement (Castañeda et al. 2018).\r\n\r\nIn this work, we investigate the solvability
    and complexity of this task on general graphs. We give a new, direct proof of
    the impossibility of approximate agreement on cycles of length   \U0001D450≥4
    , via a generalisation of Sperner’s Lemma to convex polygons. We also extend the
    reduction from 2-set agreement to a larger class of graphs, showing that approximate
    agreement on these graphs is unsolvable. On the positive side, we present a wait-free
    algorithm for a class of graphs that properly contains the class of chordal graphs."
alternative_title:
- LNCS
article_processing_charge: No
arxiv: 1
author:
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
- first_name: Faith
  full_name: Ellen, Faith
  last_name: Ellen
- first_name: Joel
  full_name: Rybicki, Joel
  id: 334EFD2E-F248-11E8-B48F-1D18A9856A87
  last_name: Rybicki
  orcid: 0000-0002-6432-6646
citation:
  ama: 'Alistarh D-A, Ellen F, Rybicki J. Wait-free approximate agreement on graphs.
    In: <i>Structural Information and Communication Complexity</i>. Vol 12810. Springer
    Nature; 2021:87-105. doi:<a href="https://doi.org/10.1007/978-3-030-79527-6_6">10.1007/978-3-030-79527-6_6</a>'
  apa: 'Alistarh, D.-A., Ellen, F., &#38; Rybicki, J. (2021). Wait-free approximate
    agreement on graphs. In <i>Structural Information and Communication Complexity</i>
    (Vol. 12810, pp. 87–105). Wrocław, Poland: Springer Nature. <a href="https://doi.org/10.1007/978-3-030-79527-6_6">https://doi.org/10.1007/978-3-030-79527-6_6</a>'
  chicago: Alistarh, Dan-Adrian, Faith Ellen, and Joel Rybicki. “Wait-Free Approximate
    Agreement on Graphs.” In <i>Structural Information and Communication Complexity</i>,
    12810:87–105. Springer Nature, 2021. <a href="https://doi.org/10.1007/978-3-030-79527-6_6">https://doi.org/10.1007/978-3-030-79527-6_6</a>.
  ieee: D.-A. Alistarh, F. Ellen, and J. Rybicki, “Wait-free approximate agreement
    on graphs,” in <i>Structural Information and Communication Complexity</i>, Wrocław,
    Poland, 2021, vol. 12810, pp. 87–105.
  ista: 'Alistarh D-A, Ellen F, Rybicki J. 2021. Wait-free approximate agreement on graphs.
    Structural Information and Communication Complexity. SIROCCO: Structural Information
    and Communication Complexity, LNCS, vol. 12810, 87–105.'
  mla: Alistarh, Dan-Adrian, et al. “Wait-Free Approximate Agreement on Graphs.” <i>Structural
    Information and Communication Complexity</i>, vol. 12810, Springer Nature, 2021,
    pp. 87–105, doi:<a href="https://doi.org/10.1007/978-3-030-79527-6_6">10.1007/978-3-030-79527-6_6</a>.
  short: D.-A. Alistarh, F. Ellen, J. Rybicki, in:, Structural Information and Communication
    Complexity, Springer Nature, 2021, pp. 87–105.
conference:
  end_date: 2021-07-01
  location: Wrocław, Poland
  name: 'SIROCCO: Structural Information and Communication Complexity'
  start_date: 2021-06-28
date_created: 2021-08-08T22:01:29Z
date_published: 2021-06-20T00:00:00Z
date_updated: 2023-02-23T14:09:49Z
day: '20'
department:
- _id: DaAl
doi: 10.1007/978-3-030-79527-6_6
external_id:
  arxiv:
  - '2103.08949'
intvolume: '     12810'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2103.08949
month: '06'
oa: 1
oa_version: Preprint
page: 87-105
publication: Structural Information and Communication Complexity
publication_identifier:
  eissn:
  - '16113349'
  isbn:
  - '9783030795269'
  issn:
  - '03029743'
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Wait-free approximate agreement on graphs
type: conference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
volume: 12810
year: '2021'
...
---
_id: '9824'
abstract:
- lang: eng
  text: We define a new compact coordinate system in which each integer triplet addresses
    a voxel in the BCC grid, and we investigate some of its properties. We propose
    a characterization of 3D discrete analytical planes with their topological features
    (in the Cartesian and in the new coordinate system) such as the interrelation
    between the thickness of the plane and the separability constraint we aim to obtain.
acknowledgement: 'This work has been partially supported by the Ministry of Education,
  Science and Technological Development of the Republic of Serbia through the project
  no. 451-03-68/2020-14/200156: “Innovative scientific and artistic research from
  the FTS (activity) domain” (LČ), the European Research Council (ERC) under the European
  Union’s Horizon 2020 research and innovation programme, grant no. 788183 (RB), and
  the DFG Collaborative Research Center TRR 109, ‘Discretization in Geometry and Dynamics’,
  Austrian Science Fund (FWF), grant no. I 02979-N35 (RB).'
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Lidija
  full_name: Čomić, Lidija
  last_name: Čomić
- first_name: Rita
  full_name: Zrour, Rita
  last_name: Zrour
- first_name: Gaëlle
  full_name: Largeteau-Skapin, Gaëlle
  last_name: Largeteau-Skapin
- first_name: Ranita
  full_name: Biswas, Ranita
  id: 3C2B033E-F248-11E8-B48F-1D18A9856A87
  last_name: Biswas
  orcid: 0000-0002-5372-7890
- first_name: Eric
  full_name: Andres, Eric
  last_name: Andres
citation:
  ama: 'Čomić L, Zrour R, Largeteau-Skapin G, Biswas R, Andres E. Body centered cubic
    grid - coordinate system and discrete analytical plane definition. In: <i>Discrete
    Geometry and Mathematical Morphology</i>. Vol 12708. Springer Nature; 2021:152-163.
    doi:<a href="https://doi.org/10.1007/978-3-030-76657-3_10">10.1007/978-3-030-76657-3_10</a>'
  apa: 'Čomić, L., Zrour, R., Largeteau-Skapin, G., Biswas, R., &#38; Andres, E. (2021).
    Body centered cubic grid - coordinate system and discrete analytical plane definition.
    In <i>Discrete Geometry and Mathematical Morphology</i> (Vol. 12708, pp. 152–163).
    Uppsala, Sweden: Springer Nature. <a href="https://doi.org/10.1007/978-3-030-76657-3_10">https://doi.org/10.1007/978-3-030-76657-3_10</a>'
  chicago: Čomić, Lidija, Rita Zrour, Gaëlle Largeteau-Skapin, Ranita Biswas, and
    Eric Andres. “Body Centered Cubic Grid - Coordinate System and Discrete Analytical
    Plane Definition.” In <i>Discrete Geometry and Mathematical Morphology</i>, 12708:152–63.
    Springer Nature, 2021. <a href="https://doi.org/10.1007/978-3-030-76657-3_10">https://doi.org/10.1007/978-3-030-76657-3_10</a>.
  ieee: L. Čomić, R. Zrour, G. Largeteau-Skapin, R. Biswas, and E. Andres, “Body centered
    cubic grid - coordinate system and discrete analytical plane definition,” in <i>Discrete
    Geometry and Mathematical Morphology</i>, Uppsala, Sweden, 2021, vol. 12708, pp.
    152–163.
  ista: 'Čomić L, Zrour R, Largeteau-Skapin G, Biswas R, Andres E. 2021. Body centered
    cubic grid - coordinate system and discrete analytical plane definition. Discrete
    Geometry and Mathematical Morphology. DGMM: International Conference on Discrete
    Geometry and Mathematical Morphology, LNCS, vol. 12708, 152–163.'
  mla: Čomić, Lidija, et al. “Body Centered Cubic Grid - Coordinate System and Discrete
    Analytical Plane Definition.” <i>Discrete Geometry and Mathematical Morphology</i>,
    vol. 12708, Springer Nature, 2021, pp. 152–63, doi:<a href="https://doi.org/10.1007/978-3-030-76657-3_10">10.1007/978-3-030-76657-3_10</a>.
  short: L. Čomić, R. Zrour, G. Largeteau-Skapin, R. Biswas, E. Andres, in:, Discrete
    Geometry and Mathematical Morphology, Springer Nature, 2021, pp. 152–163.
conference:
  end_date: 2021-05-27
  location: Uppsala, Sweden
  name: 'DGMM: International Conference on Discrete Geometry and Mathematical Morphology'
  start_date: 2021-05-24
date_created: 2021-08-08T22:01:29Z
date_published: 2021-05-16T00:00:00Z
date_updated: 2022-05-31T06:58:21Z
day: '16'
department:
- _id: HeEd
doi: 10.1007/978-3-030-76657-3_10
ec_funded: 1
intvolume: '     12708'
language:
- iso: eng
month: '05'
oa_version: None
page: 152-163
project:
- _id: 266A2E9E-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '788183'
  name: Alpha Shape Theory Extended
- _id: 2561EBF4-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: I02979-N35
  name: Persistence and stability of geometric complexes
publication: Discrete Geometry and Mathematical Morphology
publication_identifier:
  eissn:
  - '16113349'
  isbn:
  - '9783030766566'
  issn:
  - '03029743'
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Body centered cubic grid - coordinate system and discrete analytical plane
  definition
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 12708
year: '2021'
...
---
_id: '9825'
abstract:
- lang: eng
  text: "The dual attack has long been considered a relevant attack on lattice-based
    cryptographic schemes relying on the hardness of learning with errors (LWE) and
    its structured variants. As solving LWE corresponds to finding a nearest point
    on a lattice, one may naturally wonder how efficient this dual approach is for
    solving more general closest vector problems, such as the classical closest vector
    problem (CVP), the variants bounded distance decoding (BDD) and approximate CVP,
    and preprocessing versions of these problems. While primal, sieving-based solutions
    to these problems (with preprocessing) were recently studied in a series of works
    on approximate Voronoi cells [Laa16b, DLdW19, Laa20, DLvW20], for the dual attack
    no such overview exists, especially for problems with preprocessing. With one
    of the take-away messages of the approximate Voronoi cell line of work being that
    primal attacks work well for approximate CVP(P) but scale poorly for BDD(P), one
    may further wonder if the dual attack suffers the same drawbacks, or if it is
    perhaps a better solution when trying to solve BDD(P).\r\n\r\nIn this work we
    provide an overview of cost estimates for dual algorithms for solving these “classical”
    closest lattice vector problems. Heuristically we expect to solve the search version
    of average-case CVPP in time and space   20.293\U0001D451+\U0001D45C(\U0001D451)
    \ in the single-target model. The distinguishing version of average-case CVPP,
    where we wish to distinguish between random targets and targets planted at distance
    (say)   0.99⋅\U0001D454\U0001D451  from the lattice, has the same complexity in
    the single-target model, but can be solved in time and space   20.195\U0001D451+\U0001D45C(\U0001D451)
    \ in the multi-target setting, when given a large number of targets from either
    target distribution. This suggests an inequivalence between distinguishing and
    searching, as we do not expect a similar improvement in the multi-target setting
    to hold for search-CVPP. We analyze three slightly different decoders, both for
    distinguishing and searching, and experimentally obtain concrete cost estimates
    for the dual attack in dimensions 50 to 80, which confirm our heuristic assumptions,
    and show that the hidden order terms in the asymptotic estimates are quite small.\r\n\r\nOur
    main take-away message is that the dual attack appears to mirror the approximate
    Voronoi cell line of work – whereas using approximate Voronoi cells works well
    for approximate CVP(P) but scales poorly for BDD(P), the dual approach scales
    well for BDD(P) instances but performs poorly on approximate CVP(P)."
acknowledgement: The authors thank Sauvik Bhattacharya, L´eo Ducas, Rachel Player,
  and Christine van Vredendaal for early discussions on this topic and on preliminary
  results. The authors further thank the reviewers of CT-RSA 2021 for their valuable
  feedback.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Thijs
  full_name: Laarhoven, Thijs
  last_name: Laarhoven
- first_name: Michael
  full_name: Walter, Michael
  id: 488F98B0-F248-11E8-B48F-1D18A9856A87
  last_name: Walter
  orcid: 0000-0003-3186-2482
citation:
  ama: 'Laarhoven T, Walter M. Dual lattice attacks for closest vector problems (with
    preprocessing). In: <i>Topics in Cryptology – CT-RSA 2021</i>. Vol 12704. Springer
    Nature; 2021:478-502. doi:<a href="https://doi.org/10.1007/978-3-030-75539-3_20">10.1007/978-3-030-75539-3_20</a>'
  apa: 'Laarhoven, T., &#38; Walter, M. (2021). Dual lattice attacks for closest vector
    problems (with preprocessing). In <i>Topics in Cryptology – CT-RSA 2021</i> (Vol.
    12704, pp. 478–502). Virtual Event: Springer Nature. <a href="https://doi.org/10.1007/978-3-030-75539-3_20">https://doi.org/10.1007/978-3-030-75539-3_20</a>'
  chicago: Laarhoven, Thijs, and Michael Walter. “Dual Lattice Attacks for Closest
    Vector Problems (with Preprocessing).” In <i>Topics in Cryptology – CT-RSA 2021</i>,
    12704:478–502. Springer Nature, 2021. <a href="https://doi.org/10.1007/978-3-030-75539-3_20">https://doi.org/10.1007/978-3-030-75539-3_20</a>.
  ieee: T. Laarhoven and M. Walter, “Dual lattice attacks for closest vector problems
    (with preprocessing),” in <i>Topics in Cryptology – CT-RSA 2021</i>, Virtual Event,
    2021, vol. 12704, pp. 478–502.
  ista: 'Laarhoven T, Walter M. 2021. Dual lattice attacks for closest vector problems
    (with preprocessing). Topics in Cryptology – CT-RSA 2021. CT-RSA: Cryptographers’
    Track at the RSA Conference, LNCS, vol. 12704, 478–502.'
  mla: Laarhoven, Thijs, and Michael Walter. “Dual Lattice Attacks for Closest Vector
    Problems (with Preprocessing).” <i>Topics in Cryptology – CT-RSA 2021</i>, vol.
    12704, Springer Nature, 2021, pp. 478–502, doi:<a href="https://doi.org/10.1007/978-3-030-75539-3_20">10.1007/978-3-030-75539-3_20</a>.
  short: T. Laarhoven, M. Walter, in:, Topics in Cryptology – CT-RSA 2021, Springer
    Nature, 2021, pp. 478–502.
conference:
  end_date: 2021-05-20
  location: Virtual Event
  name: 'CT-RSA: Cryptographers’ Track at the RSA Conference'
  start_date: 2021-05-17
date_created: 2021-08-08T22:01:30Z
date_published: 2021-05-11T00:00:00Z
date_updated: 2023-02-23T14:09:54Z
day: '11'
department:
- _id: KrPi
doi: 10.1007/978-3-030-75539-3_20
intvolume: '     12704'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://eprint.iacr.org/2021/557
month: '05'
oa: 1
oa_version: Preprint
page: 478-502
publication: Topics in Cryptology – CT-RSA 2021
publication_identifier:
  eissn:
  - '16113349'
  isbn:
  - '9783030755386'
  issn:
  - '03029743'
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Dual lattice attacks for closest vector problems (with preprocessing)
type: conference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
volume: 12704
year: '2021'
...
---
_id: '9826'
abstract:
- lang: eng
  text: "Automated contract tracing aims at supporting manual contact tracing during
    pandemics by alerting users of encounters with infected people. There are currently
    many proposals for protocols (like the “decentralized” DP-3T and PACT or the “centralized”
    ROBERT and DESIRE) to be run on mobile phones, where the basic idea is to regularly
    broadcast (using low energy Bluetooth) some values, and at the same time store
    (a function of) incoming messages broadcasted by users in their proximity. In
    the existing proposals one can trigger false positives on a massive scale by an
    “inverse-Sybil” attack, where a large number of devices (malicious users or hacked
    phones) pretend to be the same user, such that later, just a single person needs
    to be diagnosed (and allowed to upload) to trigger an alert for all users who
    were in proximity to any of this large group of devices.\r\n\r\nWe propose the
    first protocols that do not succumb to such attacks assuming the devices involved
    in the attack do not constantly communicate, which we observe is a necessary assumption.
    The high level idea of the protocols is to derive the values to be broadcasted
    by a hash chain, so that two (or more) devices who want to launch an inverse-Sybil
    attack will not be able to connect their respective chains and thus only one of
    them will be able to upload. Our protocols also achieve security against replay,
    belated replay, and one of them even against relay attacks."
acknowledgement: Guillermo Pascual-Perez and Michelle Yeo were funded by the European
  Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska–Curie
  Grant Agreement No. 665385; the remaining contributors to this project have received
  funding from the European Research Council (ERC) under the European Union’s Horizon
  2020 research and innovation programme (682815 - TOCNeT).
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Benedikt
  full_name: Auerbach, Benedikt
  id: D33D2B18-E445-11E9-ABB7-15F4E5697425
  last_name: Auerbach
  orcid: 0000-0002-7553-6606
- first_name: Suvradip
  full_name: Chakraborty, Suvradip
  id: B9CD0494-D033-11E9-B219-A439E6697425
  last_name: Chakraborty
- first_name: Karen
  full_name: Klein, Karen
  id: 3E83A2F8-F248-11E8-B48F-1D18A9856A87
  last_name: Klein
- first_name: Guillermo
  full_name: Pascual Perez, Guillermo
  id: 2D7ABD02-F248-11E8-B48F-1D18A9856A87
  last_name: Pascual Perez
- first_name: Krzysztof Z
  full_name: Pietrzak, Krzysztof Z
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
- first_name: Michael
  full_name: Walter, Michael
  id: 488F98B0-F248-11E8-B48F-1D18A9856A87
  last_name: Walter
  orcid: 0000-0003-3186-2482
- first_name: Michelle X
  full_name: Yeo, Michelle X
  id: 2D82B818-F248-11E8-B48F-1D18A9856A87
  last_name: Yeo
citation:
  ama: 'Auerbach B, Chakraborty S, Klein K, et al. Inverse-Sybil attacks in automated
    contact tracing. In: <i>Topics in Cryptology – CT-RSA 2021</i>. Vol 12704. Springer
    Nature; 2021:399-421. doi:<a href="https://doi.org/10.1007/978-3-030-75539-3_17">10.1007/978-3-030-75539-3_17</a>'
  apa: 'Auerbach, B., Chakraborty, S., Klein, K., Pascual Perez, G., Pietrzak, K.
    Z., Walter, M., &#38; Yeo, M. X. (2021). Inverse-Sybil attacks in automated contact
    tracing. In <i>Topics in Cryptology – CT-RSA 2021</i> (Vol. 12704, pp. 399–421).
    Virtual Event: Springer Nature. <a href="https://doi.org/10.1007/978-3-030-75539-3_17">https://doi.org/10.1007/978-3-030-75539-3_17</a>'
  chicago: Auerbach, Benedikt, Suvradip Chakraborty, Karen Klein, Guillermo Pascual
    Perez, Krzysztof Z Pietrzak, Michael Walter, and Michelle X Yeo. “Inverse-Sybil
    Attacks in Automated Contact Tracing.” In <i>Topics in Cryptology – CT-RSA 2021</i>,
    12704:399–421. Springer Nature, 2021. <a href="https://doi.org/10.1007/978-3-030-75539-3_17">https://doi.org/10.1007/978-3-030-75539-3_17</a>.
  ieee: B. Auerbach <i>et al.</i>, “Inverse-Sybil attacks in automated contact tracing,”
    in <i>Topics in Cryptology – CT-RSA 2021</i>, Virtual Event, 2021, vol. 12704,
    pp. 399–421.
  ista: 'Auerbach B, Chakraborty S, Klein K, Pascual Perez G, Pietrzak KZ, Walter
    M, Yeo MX. 2021. Inverse-Sybil attacks in automated contact tracing. Topics in
    Cryptology – CT-RSA 2021. CT-RSA: Cryptographers’ Track at the RSA Conference,
    LNCS, vol. 12704, 399–421.'
  mla: Auerbach, Benedikt, et al. “Inverse-Sybil Attacks in Automated Contact Tracing.”
    <i>Topics in Cryptology – CT-RSA 2021</i>, vol. 12704, Springer Nature, 2021,
    pp. 399–421, doi:<a href="https://doi.org/10.1007/978-3-030-75539-3_17">10.1007/978-3-030-75539-3_17</a>.
  short: B. Auerbach, S. Chakraborty, K. Klein, G. Pascual Perez, K.Z. Pietrzak, M.
    Walter, M.X. Yeo, in:, Topics in Cryptology – CT-RSA 2021, Springer Nature, 2021,
    pp. 399–421.
conference:
  end_date: 2021-05-20
  location: Virtual Event
  name: 'CT-RSA: Cryptographers’ Track at the RSA Conference'
  start_date: 2021-05-17
date_created: 2021-08-08T22:01:30Z
date_published: 2021-05-11T00:00:00Z
date_updated: 2023-02-23T14:09:56Z
day: '11'
department:
- _id: KrPi
- _id: GradSch
doi: 10.1007/978-3-030-75539-3_17
ec_funded: 1
intvolume: '     12704'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://eprint.iacr.org/2020/670
month: '05'
oa: 1
oa_version: Submitted Version
page: 399-421
project:
- _id: 2564DBCA-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '665385'
  name: International IST Doctoral Program
- _id: 258AA5B2-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '682815'
  name: Teaching Old Crypto New Tricks
publication: Topics in Cryptology – CT-RSA 2021
publication_identifier:
  eissn:
  - '16113349'
  isbn:
  - '9783030755386'
  issn:
  - '03029743'
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Inverse-Sybil attacks in automated contact tracing
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 12704
year: '2021'
...
---
_id: '9827'
abstract:
- lang: eng
  text: 'The Nearest neighbour search (NNS) is a fundamental problem in many application
    domains dealing with multidimensional data. In a concurrent setting, where dynamic
    modifications are allowed, a linearizable implementation of the NNS is highly
    desirable.This paper introduces the LockFree-kD-tree (LFkD-tree ): a lock-free
    concurrent kD-tree, which implements an abstract data type (ADT) that provides
    the operations Add, Remove, Contains, and NNS. Our implementation is linearizable.
    The operations in the LFkD-tree use single-word read and compare-and-swap (Image
    1 ) atomic primitives, which are readily supported on available multi-core processors.
    We experimentally evaluate the LFkD-tree using several benchmarks comprising real-world
    and synthetic datasets. The experiments show that the presented design is scalable
    and achieves significant speed-up compared to the implementations of an existing
    sequential kD-tree and a recently proposed multidimensional indexing structure,
    PH-tree.'
article_processing_charge: No
article_type: original
author:
- first_name: Bapi
  full_name: Chatterjee, Bapi
  id: 3C41A08A-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-2742-4028
- first_name: Ivan
  full_name: Walulya, Ivan
  last_name: Walulya
- first_name: Philippas
  full_name: Tsigas, Philippas
  last_name: Tsigas
citation:
  ama: Chatterjee B, Walulya I, Tsigas P. Concurrent linearizable nearest neighbour
    search in LockFree-kD-tree. <i>Theoretical Computer Science</i>. 2021;886:27-48.
    doi:<a href="https://doi.org/10.1016/j.tcs.2021.06.041">10.1016/j.tcs.2021.06.041</a>
  apa: Chatterjee, B., Walulya, I., &#38; Tsigas, P. (2021). Concurrent linearizable
    nearest neighbour search in LockFree-kD-tree. <i>Theoretical Computer Science</i>.
    Elsevier. <a href="https://doi.org/10.1016/j.tcs.2021.06.041">https://doi.org/10.1016/j.tcs.2021.06.041</a>
  chicago: Chatterjee, Bapi, Ivan Walulya, and Philippas Tsigas. “Concurrent Linearizable
    Nearest Neighbour Search in LockFree-KD-Tree.” <i>Theoretical Computer Science</i>.
    Elsevier, 2021. <a href="https://doi.org/10.1016/j.tcs.2021.06.041">https://doi.org/10.1016/j.tcs.2021.06.041</a>.
  ieee: B. Chatterjee, I. Walulya, and P. Tsigas, “Concurrent linearizable nearest
    neighbour search in LockFree-kD-tree,” <i>Theoretical Computer Science</i>, vol.
    886. Elsevier, pp. 27–48, 2021.
  ista: Chatterjee B, Walulya I, Tsigas P. 2021. Concurrent linearizable nearest neighbour
    search in LockFree-kD-tree. Theoretical Computer Science. 886, 27–48.
  mla: Chatterjee, Bapi, et al. “Concurrent Linearizable Nearest Neighbour Search
    in LockFree-KD-Tree.” <i>Theoretical Computer Science</i>, vol. 886, Elsevier,
    2021, pp. 27–48, doi:<a href="https://doi.org/10.1016/j.tcs.2021.06.041">10.1016/j.tcs.2021.06.041</a>.
  short: B. Chatterjee, I. Walulya, P. Tsigas, Theoretical Computer Science 886 (2021)
    27–48.
date_created: 2021-08-08T22:01:31Z
date_published: 2021-09-13T00:00:00Z
date_updated: 2023-08-10T14:27:43Z
day: '13'
department:
- _id: DaAl
doi: 10.1016/j.tcs.2021.06.041
external_id:
  isi:
  - '000694718900004'
intvolume: '       886'
isi: 1
keyword:
- Concurrent data structure
- kD-tree
- Nearest neighbor search
- Similarity search
- Lock-free
- Linearizability
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://publications.lib.chalmers.se/records/fulltext/232185/232185.pdf
month: '09'
oa: 1
oa_version: Submitted Version
page: 27-48
publication: Theoretical Computer Science
publication_identifier:
  issn:
  - 0304-3975
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Concurrent linearizable nearest neighbour search in LockFree-kD-tree
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 886
year: '2021'
...
