---
_id: '11500'
abstract:
- lang: eng
  text: We report the discovery of diffuse extended Lyα emission from redshift 3.1
    to 4.5, tracing cosmic web filaments on scales of 2.5−4 cMpc. These structures
    have been observed in overdensities of Lyα emitters in the MUSE Extremely Deep
    Field, a 140 h deep MUSE observation located in the Hubble Ultra-Deep Field. Among
    the 22 overdense regions identified, five are likely to harbor very extended Lyα
    emission at high significance with an average surface brightness of 5 × 10−20
    erg s−1 cm−2 arcsec−2. Remarkably, 70% of the total Lyα luminosity from these
    filaments comes from beyond the circumgalactic medium of any identified Lyα emitter.
    Fluorescent Lyα emission powered by the cosmic UV background can only account
    for less than 34% of this emission at z ≈ 3 and for not more than 10% at higher
    redshift. We find that the bulk of this diffuse emission can be reproduced by
    the unresolved Lyα emission of a large population of ultra low-luminosity Lyα
    emitters (< 1040 erg s−1), provided that the faint end of the Lyα luminosity function
    is steep (α ⪅ −1.8), it extends down to luminosities lower than 1038 − 1037 erg
    s−1, and the clustering of these Lyα emitters is significant (filling factor <
    1/6). If these Lyα emitters are powered by star formation, then this implies their
    luminosity function needs to extend down to star formation rates < 10−4 M⊙ yr−1.
    These observations provide the first detection of the cosmic web in Lyα emission
    in typical filamentary environments and the first observational clue indicating
    the existence of a large population of ultra low-luminosity Lyα emitters at high
    redshift.
acknowledgement: 'We warmly thank ESO Paranal staff for their great professional support
  during all MXDF GTO observing runs. We thank the anonymous referee for a careful
  reading of the manuscript and helpful comments. We also thank Matthew Lehnert for
  fruitful discussions. RB, AF, SC acknowledge support from the ERC advanced grant
  339659-MUSICOS. JB acknowledges support by Fundação para a Ciência e a Tecnologia
  (FCT) through the research grants UID/FIS/04434/2019, UIDB/04434/2020, UIDP/04434/2020
  and through the Investigador FCT Contract No. IF/01654/2014/CP1215/CT0003. TG, AV
  acknowledges support from the European Research Council under grant agreement ERC-stg-757258
  (TRIPLE). DM acknowledges A. Dabbech for useful interactions about IUWT and support
  from the GDR ISIS through the Projets exploratoires program (project TASTY). AF
  acknowledges the support from grant PRIN MIUR2017-20173ML3WW_001. SLZ acknowledges
  support by The Netherlands Organisation for Scientific Research (NWO) through a
  TOP Grant Module 1 under project number 614.001.652. This research made use of the
  following open-source software and we are thankful to the developers of these: GNU
  Octave (Eaton et al. 2018) and its statistics, signal and image packages, the Python
  packages Matplotlib (Hunter 2007), Numpy (van der Walt et al. 2010), MPDAF (Piqueras
  et al. 2017), Astropy (Astropy Collaboration 2018), PyWavelets (Lee et al. 2019).'
article_number: A107
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: R.
  full_name: Bacon, R.
  last_name: Bacon
- first_name: D.
  full_name: Mary, D.
  last_name: Mary
- first_name: T.
  full_name: Garel, T.
  last_name: Garel
- first_name: J.
  full_name: Blaizot, J.
  last_name: Blaizot
- first_name: M.
  full_name: Maseda, M.
  last_name: Maseda
- first_name: J.
  full_name: Schaye, J.
  last_name: Schaye
- first_name: L.
  full_name: Wisotzki, L.
  last_name: Wisotzki
- first_name: S.
  full_name: Conseil, S.
  last_name: Conseil
- first_name: J.
  full_name: Brinchmann, J.
  last_name: Brinchmann
- first_name: F.
  full_name: Leclercq, F.
  last_name: Leclercq
- first_name: V.
  full_name: Abril-Melgarejo, V.
  last_name: Abril-Melgarejo
- first_name: L.
  full_name: Boogaard, L.
  last_name: Boogaard
- first_name: N. F.
  full_name: Bouché, N. F.
  last_name: Bouché
- first_name: T.
  full_name: Contini, T.
  last_name: Contini
- first_name: A.
  full_name: Feltre, A.
  last_name: Feltre
- first_name: B.
  full_name: Guiderdoni, B.
  last_name: Guiderdoni
- first_name: C.
  full_name: Herenz, C.
  last_name: Herenz
- first_name: W.
  full_name: Kollatschny, W.
  last_name: Kollatschny
- first_name: H.
  full_name: Kusakabe, H.
  last_name: Kusakabe
- first_name: Jorryt J
  full_name: Matthee, Jorryt J
  id: 7439a258-f3c0-11ec-9501-9df22fe06720
  last_name: Matthee
  orcid: 0000-0003-2871-127X
- first_name: L.
  full_name: Michel-Dansac, L.
  last_name: Michel-Dansac
- first_name: T.
  full_name: Nanayakkara, T.
  last_name: Nanayakkara
- first_name: J.
  full_name: Richard, J.
  last_name: Richard
- first_name: M.
  full_name: Roth, M.
  last_name: Roth
- first_name: K. B.
  full_name: Schmidt, K. B.
  last_name: Schmidt
- first_name: M.
  full_name: Steinmetz, M.
  last_name: Steinmetz
- first_name: L.
  full_name: Tresse, L.
  last_name: Tresse
- first_name: T.
  full_name: Urrutia, T.
  last_name: Urrutia
- first_name: A.
  full_name: Verhamme, A.
  last_name: Verhamme
- first_name: P. M.
  full_name: Weilbacher, P. M.
  last_name: Weilbacher
- first_name: J.
  full_name: Zabl, J.
  last_name: Zabl
- first_name: S. L.
  full_name: Zoutendijk, S. L.
  last_name: Zoutendijk
citation:
  ama: 'Bacon R, Mary D, Garel T, et al. The MUSE Extremely Deep Field: The cosmic
    web in emission at high redshift. <i>Astronomy &#38; Astrophysics</i>. 2021;647.
    doi:<a href="https://doi.org/10.1051/0004-6361/202039887">10.1051/0004-6361/202039887</a>'
  apa: 'Bacon, R., Mary, D., Garel, T., Blaizot, J., Maseda, M., Schaye, J., … Zoutendijk,
    S. L. (2021). The MUSE Extremely Deep Field: The cosmic web in emission at high
    redshift. <i>Astronomy &#38; Astrophysics</i>. EDP Sciences. <a href="https://doi.org/10.1051/0004-6361/202039887">https://doi.org/10.1051/0004-6361/202039887</a>'
  chicago: 'Bacon, R., D. Mary, T. Garel, J. Blaizot, M. Maseda, J. Schaye, L. Wisotzki,
    et al. “The MUSE Extremely Deep Field: The Cosmic Web in Emission at High Redshift.”
    <i>Astronomy &#38; Astrophysics</i>. EDP Sciences, 2021. <a href="https://doi.org/10.1051/0004-6361/202039887">https://doi.org/10.1051/0004-6361/202039887</a>.'
  ieee: 'R. Bacon <i>et al.</i>, “The MUSE Extremely Deep Field: The cosmic web in
    emission at high redshift,” <i>Astronomy &#38; Astrophysics</i>, vol. 647. EDP
    Sciences, 2021.'
  ista: 'Bacon R, Mary D, Garel T, Blaizot J, Maseda M, Schaye J, Wisotzki L, Conseil
    S, Brinchmann J, Leclercq F, Abril-Melgarejo V, Boogaard L, Bouché NF, Contini
    T, Feltre A, Guiderdoni B, Herenz C, Kollatschny W, Kusakabe H, Matthee JJ, Michel-Dansac
    L, Nanayakkara T, Richard J, Roth M, Schmidt KB, Steinmetz M, Tresse L, Urrutia
    T, Verhamme A, Weilbacher PM, Zabl J, Zoutendijk SL. 2021. The MUSE Extremely
    Deep Field: The cosmic web in emission at high redshift. Astronomy &#38; Astrophysics.
    647, A107.'
  mla: 'Bacon, R., et al. “The MUSE Extremely Deep Field: The Cosmic Web in Emission
    at High Redshift.” <i>Astronomy &#38; Astrophysics</i>, vol. 647, A107, EDP Sciences,
    2021, doi:<a href="https://doi.org/10.1051/0004-6361/202039887">10.1051/0004-6361/202039887</a>.'
  short: R. Bacon, D. Mary, T. Garel, J. Blaizot, M. Maseda, J. Schaye, L. Wisotzki,
    S. Conseil, J. Brinchmann, F. Leclercq, V. Abril-Melgarejo, L. Boogaard, N.F.
    Bouché, T. Contini, A. Feltre, B. Guiderdoni, C. Herenz, W. Kollatschny, H. Kusakabe,
    J.J. Matthee, L. Michel-Dansac, T. Nanayakkara, J. Richard, M. Roth, K.B. Schmidt,
    M. Steinmetz, L. Tresse, T. Urrutia, A. Verhamme, P.M. Weilbacher, J. Zabl, S.L.
    Zoutendijk, Astronomy &#38; Astrophysics 647 (2021).
date_created: 2022-07-06T09:31:50Z
date_published: 2021-03-18T00:00:00Z
date_updated: 2022-07-19T09:34:57Z
day: '18'
doi: 10.1051/0004-6361/202039887
extern: '1'
external_id:
  arxiv:
  - '2102.05516'
intvolume: '       647'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
- 'galaxies: high-redshift / galaxies: groups: general / cosmology: observations'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2102.05516
month: '03'
oa: 1
oa_version: Published Version
publication: Astronomy & Astrophysics
publication_identifier:
  eissn:
  - 1432-0746
  issn:
  - 0004-6361
publication_status: published
publisher: EDP Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'The MUSE Extremely Deep Field: The cosmic web in emission at high redshift'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 647
year: '2021'
...
---
_id: '11512'
abstract:
- lang: eng
  text: We study the molecular gas content of 24 star-forming galaxies at z = 3–4,
    with a median stellar mass of 109.1 M⊙, from the MUSE Hubble Ultra Deep Field
    (HUDF) Survey. Selected by their Lyα λ1216 emission and HF160W-band magnitude,
    the galaxies show an average $\langle {\mathrm{EW}}_{\mathrm{Ly}\alpha }^{0}\rangle
    \approx 20$ Å, below the typical selection threshold for Lyα emitters (${\mathrm{EW}}_{\mathrm{Ly}\alpha
    }^{0}\gt 25$ Å), and a rest-frame UV spectrum similar to Lyman-break galaxies.
    We use rest-frame optical spectroscopy from KMOS and MOSFIRE, and the UV features
    observed with MUSE, to determine the systemic redshifts, which are offset from
    Lyα by 〈Δv(Lyα)〉 = 346 km s−1, with a 100 to 600 km s−1 range. Stacking 12CO J
    = 4 → 3 and [C i]3P1 → 3P0 (and higher-J CO lines) from the ALMA Spectroscopic
    Survey of the HUDF, we determine 3σ upper limits on the line luminosities of 4.0
    × 108 K km s−1pc2 and 5.6 × 108 K km s−1pc2, respectively (for a 300 km s−1 line
    width). Stacking the 1.2 mm and 3 mm dust-continuum flux densities, we find a
    3σ upper limits of 9 μJy and 1.2 μJy, respectively. The inferred gas fractions,
    under the assumption of a "Galactic" CO-to-H2 conversion factor and gas-to-dust
    ratio, are in tension with previously determined scaling relations. This implies
    a substantially higher αCO ≥ 10 and δGDR ≥ 1200, consistent with the subsolar
    metallicity estimated for these galaxies ($12+\mathrm{log}({\rm{O}}/{\rm{H}})\approx
    7.8\pm 0.2$). The low metallicity of z ≥ 3 star-forming galaxies may thus make
    it very challenging to unveil their cold gas through CO or dust emission, warranting
    further exploration of alternative tracers, such as [C ii].
acknowledgement: 'We would like to thank the referee for a constructive and helpful
  report. L.A.B. is grateful to Corentin Schreiber for assisting with the near-infrared
  spectroscopy during the early stages of this work. L.A.B. acknowledges support from
  the Leids Kerkhoven-Bosscha Fonds under subsidy numbers 18.2.074 and 19.1.147. D.R.
  acknowledges support from the National Science Foundation under grant numbers AST-1614213
  and AST-1910107. D.R. also acknowledges support from the Alexander von Humboldt
  Foundation through a Humboldt Research Fellowship for Experienced Researchers. A.F.
  acknowledges the support from grant PRIN MIUR 201720173ML3WW_001. J.B. acknowledges
  support by Fundação para a Ciência e a Tecnologia (FCT) through the research grants
  UID/FIS/04434/2019, UIDB/04434/2020, UIDP/04434/2020. H.I. acknowledges support
  from JSPS KAKENHI grant No. JP19K23462. This work is based on observations collected
  at the European Southern Observatory under ESO programs 094.A-2089(B), 095.A-0010(A),
  096.A-0045(A), 096.A-0045(B), 099.A-0858(A), and 0101.A-0725(A). This paper makes
  use of the following ALMA data: ADS/JAO.ALMA#2016.1.00324.L. ALMA is a partnership
  of ESO (representing its member states), NSF (USA), and NINS (Japan), together with
  NRC (Canada), NSC and ASIAA (Taiwan), and KASI (Republic of Korea), in cooperation
  with the Republic of Chile. The Joint ALMA Observatory is operated by ESO, AUI/NRAO,
  and NAOJ. The National Radio Astronomy Observatory is a facility of the National
  Science Foundation operated under cooperative agreement by Associated Universities,
  Inc. This work was supported by a NASA Keck PI Data Award, administered by the NASA
  Exoplanet Science Institute. Data presented herein were obtained at the W. M. Keck
  Observatory from telescope time allocated to the National Aeronautics and Space
  Administration through the agency''s scientific partnership with the California
  Institute of Technology and the University of California. The Observatory was made
  possible by the generous financial support of the W. M. Keck Foundation. The authors
  wish to recognize and acknowledge the very significant cultural role and reverence
  that the summit of Maunakea has always had within the indigenous Hawaiian community.
  We are most fortunate to have the opportunity to conduct observations from this
  mountain.'
article_number: '12'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Leindert A.
  full_name: Boogaard, Leindert A.
  last_name: Boogaard
- first_name: Rychard J.
  full_name: Bouwens, Rychard J.
  last_name: Bouwens
- first_name: Dominik
  full_name: Riechers, Dominik
  last_name: Riechers
- first_name: Paul
  full_name: van der Werf, Paul
  last_name: van der Werf
- first_name: Roland
  full_name: Bacon, Roland
  last_name: Bacon
- first_name: Jorryt J
  full_name: Matthee, Jorryt J
  id: 7439a258-f3c0-11ec-9501-9df22fe06720
  last_name: Matthee
  orcid: 0000-0003-2871-127X
- first_name: Mauro
  full_name: Stefanon, Mauro
  last_name: Stefanon
- first_name: Anna
  full_name: Feltre, Anna
  last_name: Feltre
- first_name: Michael
  full_name: Maseda, Michael
  last_name: Maseda
- first_name: Hanae
  full_name: Inami, Hanae
  last_name: Inami
- first_name: Manuel
  full_name: Aravena, Manuel
  last_name: Aravena
- first_name: Jarle
  full_name: Brinchmann, Jarle
  last_name: Brinchmann
- first_name: Chris
  full_name: Carilli, Chris
  last_name: Carilli
- first_name: Thierry
  full_name: Contini, Thierry
  last_name: Contini
- first_name: Roberto
  full_name: Decarli, Roberto
  last_name: Decarli
- first_name: Jorge
  full_name: González-López, Jorge
  last_name: González-López
- first_name: Themiya
  full_name: Nanayakkara, Themiya
  last_name: Nanayakkara
- first_name: Fabian
  full_name: Walter, Fabian
  last_name: Walter
citation:
  ama: Boogaard LA, Bouwens RJ, Riechers D, et al. Measuring the average molecular
    gas content of star-forming galaxies at z = 3–4. <i>The Astrophysical Journal</i>.
    2021;916(1). doi:<a href="https://doi.org/10.3847/1538-4357/ac01d7">10.3847/1538-4357/ac01d7</a>
  apa: Boogaard, L. A., Bouwens, R. J., Riechers, D., van der Werf, P., Bacon, R.,
    Matthee, J. J., … Walter, F. (2021). Measuring the average molecular gas content
    of star-forming galaxies at z = 3–4. <i>The Astrophysical Journal</i>. IOP Publishing.
    <a href="https://doi.org/10.3847/1538-4357/ac01d7">https://doi.org/10.3847/1538-4357/ac01d7</a>
  chicago: Boogaard, Leindert A., Rychard J. Bouwens, Dominik Riechers, Paul van der
    Werf, Roland Bacon, Jorryt J Matthee, Mauro Stefanon, et al. “Measuring the Average
    Molecular Gas Content of Star-Forming Galaxies at z = 3–4.” <i>The Astrophysical
    Journal</i>. IOP Publishing, 2021. <a href="https://doi.org/10.3847/1538-4357/ac01d7">https://doi.org/10.3847/1538-4357/ac01d7</a>.
  ieee: L. A. Boogaard <i>et al.</i>, “Measuring the average molecular gas content
    of star-forming galaxies at z = 3–4,” <i>The Astrophysical Journal</i>, vol. 916,
    no. 1. IOP Publishing, 2021.
  ista: Boogaard LA, Bouwens RJ, Riechers D, van der Werf P, Bacon R, Matthee JJ,
    Stefanon M, Feltre A, Maseda M, Inami H, Aravena M, Brinchmann J, Carilli C, Contini
    T, Decarli R, González-López J, Nanayakkara T, Walter F. 2021. Measuring the average
    molecular gas content of star-forming galaxies at z = 3–4. The Astrophysical Journal.
    916(1), 12.
  mla: Boogaard, Leindert A., et al. “Measuring the Average Molecular Gas Content
    of Star-Forming Galaxies at z = 3–4.” <i>The Astrophysical Journal</i>, vol. 916,
    no. 1, 12, IOP Publishing, 2021, doi:<a href="https://doi.org/10.3847/1538-4357/ac01d7">10.3847/1538-4357/ac01d7</a>.
  short: L.A. Boogaard, R.J. Bouwens, D. Riechers, P. van der Werf, R. Bacon, J.J.
    Matthee, M. Stefanon, A. Feltre, M. Maseda, H. Inami, M. Aravena, J. Brinchmann,
    C. Carilli, T. Contini, R. Decarli, J. González-López, T. Nanayakkara, F. Walter,
    The Astrophysical Journal 916 (2021).
date_created: 2022-07-06T13:05:50Z
date_published: 2021-07-20T00:00:00Z
date_updated: 2022-07-19T09:32:48Z
day: '20'
doi: 10.3847/1538-4357/ac01d7
extern: '1'
external_id:
  arxiv:
  - '2105.12489'
intvolume: '       916'
issue: '1'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2105.12489
month: '07'
oa: 1
oa_version: Preprint
publication: The Astrophysical Journal
publication_identifier:
  eissn:
  - 1538-4357
  issn:
  - 0004-637X
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Measuring the average molecular gas content of star-forming galaxies at z =
  3–4
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 916
year: '2021'
...
---
_id: '11522'
abstract:
- lang: eng
  text: The decline in abundance of Lyman-α (Lyα) emitting galaxies at z ≳ 6 is a
    powerful and commonly used probe to constrain the progress of cosmic reionization.
    We use the CODAII simulation, which is a radiation hydrodynamic simulation featuring
    a box of ∼94 comoving Mpc side length, to compute the Lyα transmission properties
    of the intergalactic medium (IGM) at z ∼ 5.8 to 7. Our results mainly confirm
    previous studies, i.e. we find a declining Lyα transmission with redshift and
    a large sightline-to-sightline variation. However, motivated by the recent discovery
    of blue Lyα peaks at high redshift, we also analyse the IGM transmission on the
    blue side, which shows a rapid decline at z ≳ 6 of the blue transmission. This
    low transmission can be attributed not only to the presence of neutral regions
    but also to the residual neutral hydrogen within ionized regions, for which a
    density even as low as nHI∼10−9cm−3 (sometimes combined with kinematic effects)
    leads to a significantly reduced visibility. Still, we find that ∼1 per cent of
    sightlines towards M1600AB ∼ −21 galaxies at z ∼ 7 are transparent enough to allow
    a transmission of a blue Lyα peak. We discuss our results in the context of the
    interpretation of observations.
acknowledgement: The authors thank the referee for constructive feedback that improved
  the outcome of this study. We are grateful to Antoinette Songaila Cowie for sharing
  the ‘NEPLA4’ spectrum with us. This research has made use of NASA’s Astrophysics
  Data System, and many open source projects such as trident (Hummels et al. 2017),
  IPython (Pérez & Granger 2007), SciPy (Virtanen et al. 2019), NumPy (Walt et al.
  2011), matplotlib (Hunter 2007), pandas (McKinney 2010), and the yt-project (Turk
  et al. 2011). MG was supported by NASA through the NASA Hubble Fellowship grant
  HST-HF2-51409 awarded by the Space Telescope Science Institute, which is operated
  by the Association of Universities for Research in Astronomy, Inc., for NASA, under
  contract NAS5-26555. MG acknowledges support from NASA grants HST-GO-15643.017,
  and HST-AR15797.001 as well as XSEDE grant TG-AST180036. CAM acknowledges support
  by NASA Headquarters through the NASA Hubble Fellowship grant HST-HF2-51413.001-A.
  PRS was supported in part by U.S. NSF grant AST-1009799, NASA grant NNX11AE09G,
  and supercomputer resources from NSF XSEDE grant TG AST090005 and the Texas Advanced
  Computing Center (TACC) at The University of Texas at Austin. JM acknowledges a
  Zwicky Prize Fellowship from ETH Zurich. GY acknowledges financial support by MICIU/FEDER
  under project grant PGC2018-094975-C21. SEIB acknowledges funding from the European
  Research Council (ERC) under the European Union’s Horizon 2020 research and innovation
  programme (grant agreement No. 669253). ITI was supported by the Science and Technology
  Facilities Council [grants ST/I000976/1, ST/F002858/1, ST/P000525/1, and ST/T000473/1];
  and The Southeast Physics Network (SEPNet). KA was supported by NRF2016R1D1A1B04935414
  and NRF-2016R1A5A1013277. KA also appreciates APCTP for its hospitality during completion
  of this work. PO acknowledges support from the French ANR funded project ORAGE (ANR-14-CE33-0016).
  ND and DA acknowledge funding from the French ANR for project ANR-12-JS05- 0001
  (EMMA). The CoDa II simulation was performed at Oak Ridge National Laboratory/Oak
  Ridge Leadership Computing Facility on the Titan supercomputer (INCITE 2016 award
  AST031). Processing was performed on the Eos and Rhea clusters. Resolution study
  simulations were performed on Piz Daint at the Swiss National Supercomputing Center
  (PRACE Tier 0 award, project id pr37). The authors would like to acknowledge the
  High Performance Computing center of the University of Strasbourg for supporting
  this work by providing scientific support and access to computing resources. Part
  of the computing resources were funded by the Equipex EquipMeso project (Programme
  Investissements d’Avenir) and the CPER Alsacalcul/Big Data.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Max
  full_name: Gronke, Max
  last_name: Gronke
- first_name: Pierre
  full_name: Ocvirk, Pierre
  last_name: Ocvirk
- first_name: Charlotte
  full_name: Mason, Charlotte
  last_name: Mason
- first_name: Jorryt J
  full_name: Matthee, Jorryt J
  id: 7439a258-f3c0-11ec-9501-9df22fe06720
  last_name: Matthee
  orcid: 0000-0003-2871-127X
- first_name: Sarah E I
  full_name: Bosman, Sarah E I
  last_name: Bosman
- first_name: Jenny G
  full_name: Sorce, Jenny G
  last_name: Sorce
- first_name: Joseph
  full_name: Lewis, Joseph
  last_name: Lewis
- first_name: Kyungjin
  full_name: Ahn, Kyungjin
  last_name: Ahn
- first_name: Dominique
  full_name: Aubert, Dominique
  last_name: Aubert
- first_name: Taha
  full_name: Dawoodbhoy, Taha
  last_name: Dawoodbhoy
- first_name: Ilian T
  full_name: Iliev, Ilian T
  last_name: Iliev
- first_name: Paul R
  full_name: Shapiro, Paul R
  last_name: Shapiro
- first_name: Gustavo
  full_name: Yepes, Gustavo
  last_name: Yepes
citation:
  ama: Gronke M, Ocvirk P, Mason C, et al. Lyman-α transmission properties of the
    intergalactic medium in the CoDaII simulation. <i>Monthly Notices of the Royal
    Astronomical Society</i>. 2021;508(3):3697-3709. doi:<a href="https://doi.org/10.1093/mnras/stab2762">10.1093/mnras/stab2762</a>
  apa: Gronke, M., Ocvirk, P., Mason, C., Matthee, J. J., Bosman, S. E. I., Sorce,
    J. G., … Yepes, G. (2021). Lyman-α transmission properties of the intergalactic
    medium in the CoDaII simulation. <i>Monthly Notices of the Royal Astronomical
    Society</i>. Oxford University Press. <a href="https://doi.org/10.1093/mnras/stab2762">https://doi.org/10.1093/mnras/stab2762</a>
  chicago: Gronke, Max, Pierre Ocvirk, Charlotte Mason, Jorryt J Matthee, Sarah E
    I Bosman, Jenny G Sorce, Joseph Lewis, et al. “Lyman-α Transmission Properties
    of the Intergalactic Medium in the CoDaII Simulation.” <i>Monthly Notices of the
    Royal Astronomical Society</i>. Oxford University Press, 2021. <a href="https://doi.org/10.1093/mnras/stab2762">https://doi.org/10.1093/mnras/stab2762</a>.
  ieee: M. Gronke <i>et al.</i>, “Lyman-α transmission properties of the intergalactic
    medium in the CoDaII simulation,” <i>Monthly Notices of the Royal Astronomical
    Society</i>, vol. 508, no. 3. Oxford University Press, pp. 3697–3709, 2021.
  ista: Gronke M, Ocvirk P, Mason C, Matthee JJ, Bosman SEI, Sorce JG, Lewis J, Ahn
    K, Aubert D, Dawoodbhoy T, Iliev IT, Shapiro PR, Yepes G. 2021. Lyman-α transmission
    properties of the intergalactic medium in the CoDaII simulation. Monthly Notices
    of the Royal Astronomical Society. 508(3), 3697–3709.
  mla: Gronke, Max, et al. “Lyman-α Transmission Properties of the Intergalactic Medium
    in the CoDaII Simulation.” <i>Monthly Notices of the Royal Astronomical Society</i>,
    vol. 508, no. 3, Oxford University Press, 2021, pp. 3697–709, doi:<a href="https://doi.org/10.1093/mnras/stab2762">10.1093/mnras/stab2762</a>.
  short: M. Gronke, P. Ocvirk, C. Mason, J.J. Matthee, S.E.I. Bosman, J.G. Sorce,
    J. Lewis, K. Ahn, D. Aubert, T. Dawoodbhoy, I.T. Iliev, P.R. Shapiro, G. Yepes,
    Monthly Notices of the Royal Astronomical Society 508 (2021) 3697–3709.
date_created: 2022-07-07T09:30:21Z
date_published: 2021-12-01T00:00:00Z
date_updated: 2022-08-18T10:45:56Z
day: '01'
doi: 10.1093/mnras/stab2762
extern: '1'
external_id:
  arxiv:
  - '2004.14496'
intvolume: '       508'
issue: '3'
keyword:
- dark ages
- reionization
- first stars
- intergalactic medium
- 'galaxies: formation'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2004.14496
month: '12'
oa: 1
oa_version: Preprint
page: 3697-3709
publication: Monthly Notices of the Royal Astronomical Society
publication_identifier:
  eissn:
  - 1365-2966
  issn:
  - 0035-8711
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Lyman-α transmission properties of the intergalactic medium in the CoDaII simulation
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 508
year: '2021'
...
---
_id: '11523'
abstract:
- lang: eng
  text: We present the first results from the X-SHOOTER Lyman α survey at z = 2 (XLS-z2).
    XLS-z2 is a deep spectroscopic survey of 35 Lyman α emitters (LAEs) utilizing
    ≈90 h of exposure time with Very Large Telescope/X-SHOOTER and covers rest-frame
    Ly α to H α emission with R ≈ 4000. We present the sample selection, the observations,
    and the data reduction. Systemic redshifts are measured from rest-frame optical
    lines for 33/35 sources. In the stacked spectrum, our LAEs are characterized by
    an interstellar medium with little dust, a low metallicity, and a high ionization
    state. The ionizing sources are young hot stars that power strong emission lines
    in the optical and high-ionization lines in the ultraviolet (UV). The LAEs exhibit
    clumpy UV morphologies and have outflowing kinematics with blueshifted Si II absorption,
    a broad [O III] component, and a red-skewed Ly α line. Typically, 30 per cent
    of the Ly α photons escape, of which one quarter on the blue side of the systemic
    velocity. A fraction of Ly α photons escape directly at the systemic suggesting
    clear channels enabling an ≈10 per cent escape of ionizing photons, consistent
    with an inference based on Mg II. A combination of a low effective H I column
    density, a low dust content, and young starburst determines whether a star-forming
    galaxy is observed as an LAE. The first is possibly related to outflows and/or
    a fortunate viewing angle, while we find that the latter two in LAEs are typical
    for their stellar mass of 109 M⊙.
acknowledgement: "We thank the referee for constructive comments and suggestions.
  We thank Dawn Erb, Ruari Mackenzie, Ivan Oteo, Ryan Sanders, and Johannes Zabl for
  useful discussions and suggestions. It is a pleasure to thank the ESO User Support,
  in particular Giacomo Beccari, Carlo Manara, John Pritchard, Marina Rejkuba, and
  Lowell Tacconi-Garman for assistance in the preparation and execution of the observations.
  Based on observations obtained with the VLT, programs 084.A-0303, 088.A-0672, 091.A-0413,
  091.A-0546, 092.A0774, 097.A-0153, 098.A-0819, 099.A-0758, 099.A-0254, 101.B0779,
  and 102.A-0652. Based on data products from observations made with ESO Telescopes
  at the La Silla Paranal Observatory under ESO programme ID 179.A-2005 and on data
  products produced by CALET and the Cambridge Astronomy Survey Unit on behalf of
  the UltraVISTA consortium. Based on observations made with the NASA/ESA HST through
  programs 9133, 9367, 11694, and 12471, and obtained from the Hubble Legacy Archive,
  which is a collaboration between the Space Telescope Science Institute (STScI/NASA),
  the Space Telescope European Coordinating Facility (ST-ECF/ESA), and the Canadian
  Astronomy Data Centre (CADC/NRC/CSA). This work is based on observations taken by
  the CANDELS Multi-Cycle Treasury Program with the NASA/ESA HST, which is operated
  by the Association of Universities for Research in Astronomy, Inc., under NASA contract
  NAS5-26555. MG was supported by NASA through the NASA Hubble Fellowship grant HST-HF2-51409
  and acknowledges support from HST grants\r\nHST-GO-15643.017-A, HST-AR-15039.003-A,
  and XSEDE grant TG-AST180036. GP acknowledges support from the Netherlands Research
  School for Astronomy (NOVA). RA acknowledges the support of ANID FONDECYT Regular
  Grant 1202007. We gratefully acknowledge the PYTHON programming language, its NUMPY,
  MATPLOTLIB, SCIPY, LMFIT (Jones et al. 2001; Hunter 2007; van der Walt, Colbert
  & Varoquaux 2011), PANDAS (McKinney 2010), and ASTROPY (Astropy Collaboration 2013)
  packages, and the TOPCAT analysis tool (Taylor 2013). Dedicated to the memory of
  A. C. J.Matthee (1953–2020)."
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Jorryt J
  full_name: Matthee, Jorryt J
  id: 7439a258-f3c0-11ec-9501-9df22fe06720
  last_name: Matthee
  orcid: 0000-0003-2871-127X
- first_name: David
  full_name: Sobral, David
  last_name: Sobral
- first_name: Matthew
  full_name: Hayes, Matthew
  last_name: Hayes
- first_name: Gabriele
  full_name: Pezzulli, Gabriele
  last_name: Pezzulli
- first_name: Max
  full_name: Gronke, Max
  last_name: Gronke
- first_name: Daniel
  full_name: Schaerer, Daniel
  last_name: Schaerer
- first_name: Rohan P
  full_name: Naidu, Rohan P
  last_name: Naidu
- first_name: Huub
  full_name: Röttgering, Huub
  last_name: Röttgering
- first_name: João
  full_name: Calhau, João
  last_name: Calhau
- first_name: Ana
  full_name: Paulino-Afonso, Ana
  last_name: Paulino-Afonso
- first_name: Sérgio
  full_name: Santos, Sérgio
  last_name: Santos
- first_name: Ricardo
  full_name: Amorín, Ricardo
  last_name: Amorín
citation:
  ama: 'Matthee JJ, Sobral D, Hayes M, et al. The X-SHOOTER Lyman α survey at z =
    2 (XLS-z2) I: What makes a galaxy a Lyman α emitter? <i>Monthly Notices of the
    Royal Astronomical Society</i>. 2021;505(1):1382-1412. doi:<a href="https://doi.org/10.1093/mnras/stab1304">10.1093/mnras/stab1304</a>'
  apa: 'Matthee, J. J., Sobral, D., Hayes, M., Pezzulli, G., Gronke, M., Schaerer,
    D., … Amorín, R. (2021). The X-SHOOTER Lyman α survey at z = 2 (XLS-z2) I: What
    makes a galaxy a Lyman α emitter? <i>Monthly Notices of the Royal Astronomical
    Society</i>. Oxford University Press. <a href="https://doi.org/10.1093/mnras/stab1304">https://doi.org/10.1093/mnras/stab1304</a>'
  chicago: 'Matthee, Jorryt J, David Sobral, Matthew Hayes, Gabriele Pezzulli, Max
    Gronke, Daniel Schaerer, Rohan P Naidu, et al. “The X-SHOOTER Lyman α Survey at
    z = 2 (XLS-Z2) I: What Makes a Galaxy a Lyman α Emitter?” <i>Monthly Notices of
    the Royal Astronomical Society</i>. Oxford University Press, 2021. <a href="https://doi.org/10.1093/mnras/stab1304">https://doi.org/10.1093/mnras/stab1304</a>.'
  ieee: 'J. J. Matthee <i>et al.</i>, “The X-SHOOTER Lyman α survey at z = 2 (XLS-z2)
    I: What makes a galaxy a Lyman α emitter?,” <i>Monthly Notices of the Royal Astronomical
    Society</i>, vol. 505, no. 1. Oxford University Press, pp. 1382–1412, 2021.'
  ista: 'Matthee JJ, Sobral D, Hayes M, Pezzulli G, Gronke M, Schaerer D, Naidu RP,
    Röttgering H, Calhau J, Paulino-Afonso A, Santos S, Amorín R. 2021. The X-SHOOTER
    Lyman α survey at z = 2 (XLS-z2) I: What makes a galaxy a Lyman α emitter? Monthly
    Notices of the Royal Astronomical Society. 505(1), 1382–1412.'
  mla: 'Matthee, Jorryt J., et al. “The X-SHOOTER Lyman α Survey at z = 2 (XLS-Z2)
    I: What Makes a Galaxy a Lyman α Emitter?” <i>Monthly Notices of the Royal Astronomical
    Society</i>, vol. 505, no. 1, Oxford University Press, 2021, pp. 1382–412, doi:<a
    href="https://doi.org/10.1093/mnras/stab1304">10.1093/mnras/stab1304</a>.'
  short: J.J. Matthee, D. Sobral, M. Hayes, G. Pezzulli, M. Gronke, D. Schaerer, R.P.
    Naidu, H. Röttgering, J. Calhau, A. Paulino-Afonso, S. Santos, R. Amorín, Monthly
    Notices of the Royal Astronomical Society 505 (2021) 1382–1412.
date_created: 2022-07-07T09:33:39Z
date_published: 2021-07-01T00:00:00Z
date_updated: 2022-08-18T10:49:00Z
day: '01'
doi: 10.1093/mnras/stab1304
extern: '1'
external_id:
  arxiv:
  - '2102.07779'
intvolume: '       505'
issue: '1'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
- 'galaxies: formation'
- 'galaxies: ISM'
- 'galaxies: starburst'
- dark ages
- reionization
- first stars
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2102.07779
month: '07'
oa: 1
oa_version: Preprint
page: 1382-1412
publication: Monthly Notices of the Royal Astronomical Society
publication_identifier:
  eissn:
  - 1365-2966
  issn:
  - 0035-8711
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'The X-SHOOTER Lyman α survey at z = 2 (XLS-z2) I: What makes a galaxy a Lyman
  α emitter?'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 505
year: '2021'
...
---
_id: '11524'
abstract:
- lang: eng
  text: We measure the evolution of the rest-frame UV luminosity function (LF) and
    the stellar mass function (SMF) of Lyman-α (Ly α) emitters (LAEs) from z ∼ 2 to
    z ∼ 6 by exploring ∼4000 LAEs from the SC4K sample. We find a correlation between
    Ly α luminosity (LLy α) and rest-frame UV (MUV), with best fit MUV=−1.6+0.2−0.3log10(LLyα/ergs−1)+47+12−11
    and a shallower relation between LLy α and stellar mass (M⋆), with best fit log10(M⋆/M⊙)=0.9+0.1−0.1log10(LLyα/ergs−1)−28+4.0−3.8⁠.
    An increasing LLy α cut predominantly lowers the number density of faint MUV and
    low M⋆ LAEs. We estimate a proxy for the full UV LFs and SMFs of LAEs with simple
    assumptions of the faint end slope. For the UV LF, we find a brightening of the
    characteristic UV luminosity (M∗UV⁠) with increasing redshift and a decrease of
    the characteristic number density (Φ*). For the SMF, we measure a characteristic
    stellar mass (⁠M∗⋆/M⊙⁠) increase with increasing redshift, and a Φ* decline. However,
    if we apply a uniform luminosity cut of log10(LLyα/ergs−1)≥43.0⁠, we find much
    milder to no evolution in the UV and SMF of LAEs. The UV luminosity density (ρUV)
    of the full sample of LAEs shows moderate evolution and the stellar mass density
    (ρM) decreases, with both being always lower than the total ρUV and ρM of more
    typical galaxies but slowly approaching them with increasing redshift. Overall,
    our results indicate that both ρUV and ρM of LAEs slowly approach the measurements
    of continuum-selected galaxies at z > 6, which suggests a key role of LAEs in
    the epoch of reionization.
acknowledgement: This research made use of Astropy, a community developed core Python
  package for Astronomy (Astropy Collaboration et al. 2013). topcat, a graphical tool
  for manipulating tabular data, was also utilized in this analysis (Taylor 2005).
  SG would like to thank Nastasha Wijers for the discussion on the column density
  distribution in EAGLE. SC gratefully acknowledges support from Swiss National Science
  Foundation grants PP00P2 163824 and PP00P2 190092, and from the European Research
  Council (ERC) under the European Union’s Horizon 2020 research and innovation programme
  grant agreement No 864361. GP acknowledges support from the Swiss National Science
  Foundation (SNF) and from the Netherlands Research School for Astronomy (NOVA).
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: S
  full_name: Santos, S
  last_name: Santos
- first_name: D
  full_name: Sobral, D
  last_name: Sobral
- first_name: J
  full_name: Butterworth, J
  last_name: Butterworth
- first_name: A
  full_name: Paulino-Afonso, A
  last_name: Paulino-Afonso
- first_name: B
  full_name: Ribeiro, B
  last_name: Ribeiro
- first_name: E
  full_name: da Cunha, E
  last_name: da Cunha
- first_name: J
  full_name: Calhau, J
  last_name: Calhau
- first_name: A A
  full_name: Khostovan, A A
  last_name: Khostovan
- first_name: Jorryt J
  full_name: Matthee, Jorryt J
  id: 7439a258-f3c0-11ec-9501-9df22fe06720
  last_name: Matthee
  orcid: 0000-0003-2871-127X
- first_name: P
  full_name: Arrabal Haro, P
  last_name: Arrabal Haro
citation:
  ama: Santos S, Sobral D, Butterworth J, et al. The evolution of the UV luminosity
    and stellar mass functions of Lyman-α emitters from z ∼ 2 to z ∼ 6. <i>Monthly
    Notices of the Royal Astronomical Society</i>. 2021;505(1):1117-1134. doi:<a href="https://doi.org/10.1093/mnras/stab1218">10.1093/mnras/stab1218</a>
  apa: Santos, S., Sobral, D., Butterworth, J., Paulino-Afonso, A., Ribeiro, B., da Cunha,
    E., … Arrabal Haro, P. (2021). The evolution of the UV luminosity and stellar
    mass functions of Lyman-α emitters from z ∼ 2 to z ∼ 6. <i>Monthly Notices of
    the Royal Astronomical Society</i>. Oxford University Press. <a href="https://doi.org/10.1093/mnras/stab1218">https://doi.org/10.1093/mnras/stab1218</a>
  chicago: Santos, S, D Sobral, J Butterworth, A Paulino-Afonso, B Ribeiro, E da Cunha,
    J Calhau, A A Khostovan, Jorryt J Matthee, and P Arrabal Haro. “The Evolution
    of the UV Luminosity and Stellar Mass Functions of Lyman-α Emitters from z ∼ 2
    to z ∼ 6.” <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University
    Press, 2021. <a href="https://doi.org/10.1093/mnras/stab1218">https://doi.org/10.1093/mnras/stab1218</a>.
  ieee: S. Santos <i>et al.</i>, “The evolution of the UV luminosity and stellar mass
    functions of Lyman-α emitters from z ∼ 2 to z ∼ 6,” <i>Monthly Notices of the
    Royal Astronomical Society</i>, vol. 505, no. 1. Oxford University Press, pp.
    1117–1134, 2021.
  ista: Santos S, Sobral D, Butterworth J, Paulino-Afonso A, Ribeiro B, da Cunha E,
    Calhau J, Khostovan AA, Matthee JJ, Arrabal Haro P. 2021. The evolution of the
    UV luminosity and stellar mass functions of Lyman-α emitters from z ∼ 2 to z ∼
    6. Monthly Notices of the Royal Astronomical Society. 505(1), 1117–1134.
  mla: Santos, S., et al. “The Evolution of the UV Luminosity and Stellar Mass Functions
    of Lyman-α Emitters from z ∼ 2 to z ∼ 6.” <i>Monthly Notices of the Royal Astronomical
    Society</i>, vol. 505, no. 1, Oxford University Press, 2021, pp. 1117–34, doi:<a
    href="https://doi.org/10.1093/mnras/stab1218">10.1093/mnras/stab1218</a>.
  short: S. Santos, D. Sobral, J. Butterworth, A. Paulino-Afonso, B. Ribeiro, E. da Cunha,
    J. Calhau, A.A. Khostovan, J.J. Matthee, P. Arrabal Haro, Monthly Notices of the
    Royal Astronomical Society 505 (2021) 1117–1134.
date_created: 2022-07-07T10:02:59Z
date_published: 2021-07-01T00:00:00Z
date_updated: 2022-08-18T10:51:47Z
day: '01'
doi: 10.1093/mnras/stab1218
extern: '1'
external_id:
  arxiv:
  - '2105.00007'
intvolume: '       505'
issue: '1'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
- 'galaxies: evolution'
- 'galaxies: high-redshift'
- 'galaxies: luminosity function'
- mass function
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2105.00007
month: '07'
oa: 1
oa_version: Preprint
page: 1117-1134
publication: Monthly Notices of the Royal Astronomical Society
publication_identifier:
  eissn:
  - 1365-2966
  issn:
  - 0035-8711
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: The evolution of the UV luminosity and stellar mass functions of Lyman-α emitters
  from z ∼ 2 to z ∼ 6
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 505
year: '2021'
...
---
_id: '11525'
abstract:
- lang: eng
  text: The intensity of the Cosmic UV background (UVB), coming from all sources of
    ionizing photons such as star-forming galaxies and quasars, determines the thermal
    evolution and ionization state of the intergalactic medium (IGM) and is, therefore,
    a critical ingredient for models of cosmic structure formation. Most of the previous
    estimates are based on the comparison between observed and simulated Lyman-α forest.
    We present the results of an independent method to constrain the product of the
    UVB photoionization rate and the covering fraction of Lyman limit systems (LLSs)
    by searching for the fluorescent Lyman-α emission produced by self-shielded clouds.
    Because the expected surface brightness is well below current sensitivity limits
    for direct imaging, we developed a new method based on 3D stacking of the IGM
    around Lyman-α emitting galaxies (LAEs) between 2.9 < z < 6.6 using deep MUSE
    observations. Combining our results with covering fractions of LLSs obtained from
    mock cubes extracted from the EAGLE simulation, we obtain new and independent
    constraints on the UVB at z > 3 that are consistent with previous measurements,
    with a preference for relatively low UVB intensities at z = 3, and which suggest
    a non-monotonic decrease of ΓH I with increasing redshift between 3 < z < 5. This
    could suggest a possible tension between some UVB models and current observations
    which however require deeper and wider observations in Lyman-α emission and absorption
    to be confirmed. Assuming instead a value of UVB from current models, our results
    constrain the covering fraction of LLSs at 3 < z < 4.5 to be less than 25 per cent
    within 150 kpc from LAEs.
acknowledgement: This research made use of Astropy, a community developed core Python
  package for Astronomy (Astropy Collaboration et al. 2013). topcat, a graphical tool
  for manipulating tabular data, was also utilized in this analysis (Taylor 2005).
  SG would like to thank Nastasha Wijers for the discussion on the column density
  distribution in EAGLE. SC gratefully acknowledges support from Swiss National Science
  Foundation grants PP00P2 163824 and PP00P2 190092, and from the European Research
  Council (ERC) under the European Union’s Horizon 2020 research and innovation programme
  grant agreement No 864361. GP acknowledges support from the Swiss National Science
  Foundation (SNF) and from the Netherlands Research School for Astronomy (NOVA).
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Sofia G
  full_name: Gallego, Sofia G
  last_name: Gallego
- first_name: Sebastiano
  full_name: Cantalupo, Sebastiano
  last_name: Cantalupo
- first_name: Saeed
  full_name: Sarpas, Saeed
  last_name: Sarpas
- first_name: Bastien
  full_name: Duboeuf, Bastien
  last_name: Duboeuf
- first_name: Simon
  full_name: Lilly, Simon
  last_name: Lilly
- first_name: Gabriele
  full_name: Pezzulli, Gabriele
  last_name: Pezzulli
- first_name: Raffaella Anna
  full_name: Marino, Raffaella Anna
  last_name: Marino
- first_name: Jorryt J
  full_name: Matthee, Jorryt J
  id: 7439a258-f3c0-11ec-9501-9df22fe06720
  last_name: Matthee
  orcid: 0000-0003-2871-127X
- first_name: Lutz
  full_name: Wisotzki, Lutz
  last_name: Wisotzki
- first_name: Joop
  full_name: Schaye, Joop
  last_name: Schaye
- first_name: Johan
  full_name: Richard, Johan
  last_name: Richard
- first_name: Haruka
  full_name: Kusakabe, Haruka
  last_name: Kusakabe
- first_name: Valentin
  full_name: Mauerhofer, Valentin
  last_name: Mauerhofer
citation:
  ama: Gallego SG, Cantalupo S, Sarpas S, et al. Constraining the cosmic UV background
    at z &#62; 3 with MUSE Lyman-α emission observations. <i>Monthly Notices of the
    Royal Astronomical Society</i>. 2021;504(1):16-32. doi:<a href="https://doi.org/10.1093/mnras/stab796">10.1093/mnras/stab796</a>
  apa: Gallego, S. G., Cantalupo, S., Sarpas, S., Duboeuf, B., Lilly, S., Pezzulli,
    G., … Mauerhofer, V. (2021). Constraining the cosmic UV background at z &#62;
    3 with MUSE Lyman-α emission observations. <i>Monthly Notices of the Royal Astronomical
    Society</i>. Oxford University Press. <a href="https://doi.org/10.1093/mnras/stab796">https://doi.org/10.1093/mnras/stab796</a>
  chicago: Gallego, Sofia G, Sebastiano Cantalupo, Saeed Sarpas, Bastien Duboeuf,
    Simon Lilly, Gabriele Pezzulli, Raffaella Anna Marino, et al. “Constraining the
    Cosmic UV Background at z &#62; 3 with MUSE Lyman-α Emission Observations.” <i>Monthly
    Notices of the Royal Astronomical Society</i>. Oxford University Press, 2021.
    <a href="https://doi.org/10.1093/mnras/stab796">https://doi.org/10.1093/mnras/stab796</a>.
  ieee: S. G. Gallego <i>et al.</i>, “Constraining the cosmic UV background at z &#62;
    3 with MUSE Lyman-α emission observations,” <i>Monthly Notices of the Royal Astronomical
    Society</i>, vol. 504, no. 1. Oxford University Press, pp. 16–32, 2021.
  ista: Gallego SG, Cantalupo S, Sarpas S, Duboeuf B, Lilly S, Pezzulli G, Marino
    RA, Matthee JJ, Wisotzki L, Schaye J, Richard J, Kusakabe H, Mauerhofer V. 2021.
    Constraining the cosmic UV background at z &#62; 3 with MUSE Lyman-α emission
    observations. Monthly Notices of the Royal Astronomical Society. 504(1), 16–32.
  mla: Gallego, Sofia G., et al. “Constraining the Cosmic UV Background at z &#62;
    3 with MUSE Lyman-α Emission Observations.” <i>Monthly Notices of the Royal Astronomical
    Society</i>, vol. 504, no. 1, Oxford University Press, 2021, pp. 16–32, doi:<a
    href="https://doi.org/10.1093/mnras/stab796">10.1093/mnras/stab796</a>.
  short: S.G. Gallego, S. Cantalupo, S. Sarpas, B. Duboeuf, S. Lilly, G. Pezzulli,
    R.A. Marino, J.J. Matthee, L. Wisotzki, J. Schaye, J. Richard, H. Kusakabe, V.
    Mauerhofer, Monthly Notices of the Royal Astronomical Society 504 (2021) 16–32.
date_created: 2022-07-07T10:07:11Z
date_published: 2021-06-01T00:00:00Z
date_updated: 2022-08-18T10:54:19Z
day: '01'
doi: 10.1093/mnras/stab796
extern: '1'
external_id:
  arxiv:
  - '2103.09250'
intvolume: '       504'
issue: '1'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2103.09250
month: '06'
oa: 1
oa_version: Preprint
page: 16-32
publication: Monthly Notices of the Royal Astronomical Society
publication_identifier:
  eissn:
  - 1365-2966
  issn:
  - 0035-8711
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Constraining the cosmic UV background at z > 3 with MUSE Lyman-α emission observations
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 504
year: '2021'
...
---
_id: '11526'
abstract:
- lang: eng
  text: We present the results from a MUSE survey of twelve z ≃ 3.15 quasars, which
    were selected to be much fainter (20 < iSDSS < 23) than in previous studies of
    giant Ly α nebulae around the brightest quasars (16.6 < iAB < 18.7). We detect
    H I Ly α nebulae around 100 per cent of our target quasars, with emission extending
    to scales of at least 60 physical kpc, and up to 190 pkpc. We explore correlations
    between properties of the nebulae and their host quasars, with the goal of connecting
    variations in the properties of the illuminating QSO to the response in nebular
    emission. We show that the surface brightness profiles of the nebulae are similar
    to those of nebulae around bright quasars, but with a lower normalization. Our
    targeted quasars are on average 3.7 mag (≃30 times) fainter in UV continuum than
    our bright reference sample, and yet the nebulae around them are only 4.3 times
    fainter in mean Ly α surface brightness, measured between 20 and 50 pkpc. We find
    significant correlations between the surface brightness of the nebula and the
    luminosity of the quasar in both UV continuum and Ly α. The latter can be interpreted
    as evidence for a substantial contribution from unresolved inner parts of the
    nebulae to the narrow components seen in the Ly α lines of some of our faint quasars,
    possibly from the inner circumgalactic medium or from the host galaxy’s interstellar
    medium.
acknowledgement: The authors thank Daichi Kashino, for providing access to unpublished
  zCOSMOS Deep data, and Jakob S. den Brok for sharing code used in den Brok et al.
  (2020). GP and SC acknowledge the support of the Swiss National Science Foundation
  [grant PP00P2163824]. SM is supported by the Experienced Researchers Fellowship,
  Alexander von Humboldt-Stiftung, Germany. This work is based on observations collected
  at the European Organisation for Astronomical Research in the Southern Hemisphere
  under the MUSE GTO programme. The major analysis and production of figures in this
  work was conducted in Python, using standard libraries which include NumPy (Harris
  et al. 2020), SciPy (Virtanen et al. 2020), Matplotlib (Hunter 2007) and the interactive
  command shell IPython (Pérez & Granger 2007). This research also made use of Astropy,
  a community-developed core Python package for Astronomy (Astropy Collaboration et
  al. 2013), and Photutils, an Astropy package for detection and photometry of astronomica
  sources (Bradley et al. 2019). The python interface dustmaps (Green 2018) was used
  to query galactic extinction maps. topcat, a graphical tool for manipulating tabular
  data, was also utilized in this analysis (Taylor 2005). This research has made use
  of the "Aladin sky atlas" developed at CDS, Strasbourg Observatory, France (Bonnarel
  et al. 2000).
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Ruari
  full_name: Mackenzie, Ruari
  last_name: Mackenzie
- first_name: Gabriele
  full_name: Pezzulli, Gabriele
  last_name: Pezzulli
- first_name: Sebastiano
  full_name: Cantalupo, Sebastiano
  last_name: Cantalupo
- first_name: Raffaella A
  full_name: Marino, Raffaella A
  last_name: Marino
- first_name: Simon
  full_name: Lilly, Simon
  last_name: Lilly
- first_name: Sowgat
  full_name: Muzahid, Sowgat
  last_name: Muzahid
- first_name: Jorryt J
  full_name: Matthee, Jorryt J
  id: 7439a258-f3c0-11ec-9501-9df22fe06720
  last_name: Matthee
  orcid: 0000-0003-2871-127X
- first_name: Joop
  full_name: Schaye, Joop
  last_name: Schaye
- first_name: Lutz
  full_name: Wisotzki, Lutz
  last_name: Wisotzki
citation:
  ama: Mackenzie R, Pezzulli G, Cantalupo S, et al. Revealing the impact of quasar
    luminosity on giant Lyα nebulae. <i>Monthly Notices of the Royal Astronomical
    Society</i>. 2021;502(1):494-509. doi:<a href="https://doi.org/10.1093/mnras/staa3277">10.1093/mnras/staa3277</a>
  apa: Mackenzie, R., Pezzulli, G., Cantalupo, S., Marino, R. A., Lilly, S., Muzahid,
    S., … Wisotzki, L. (2021). Revealing the impact of quasar luminosity on giant
    Lyα nebulae. <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford
    University Press. <a href="https://doi.org/10.1093/mnras/staa3277">https://doi.org/10.1093/mnras/staa3277</a>
  chicago: Mackenzie, Ruari, Gabriele Pezzulli, Sebastiano Cantalupo, Raffaella A
    Marino, Simon Lilly, Sowgat Muzahid, Jorryt J Matthee, Joop Schaye, and Lutz Wisotzki.
    “Revealing the Impact of Quasar Luminosity on Giant Lyα Nebulae.” <i>Monthly Notices
    of the Royal Astronomical Society</i>. Oxford University Press, 2021. <a href="https://doi.org/10.1093/mnras/staa3277">https://doi.org/10.1093/mnras/staa3277</a>.
  ieee: R. Mackenzie <i>et al.</i>, “Revealing the impact of quasar luminosity on
    giant Lyα nebulae,” <i>Monthly Notices of the Royal Astronomical Society</i>,
    vol. 502, no. 1. Oxford University Press, pp. 494–509, 2021.
  ista: Mackenzie R, Pezzulli G, Cantalupo S, Marino RA, Lilly S, Muzahid S, Matthee
    JJ, Schaye J, Wisotzki L. 2021. Revealing the impact of quasar luminosity on giant
    Lyα nebulae. Monthly Notices of the Royal Astronomical Society. 502(1), 494–509.
  mla: Mackenzie, Ruari, et al. “Revealing the Impact of Quasar Luminosity on Giant
    Lyα Nebulae.” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 502,
    no. 1, Oxford University Press, 2021, pp. 494–509, doi:<a href="https://doi.org/10.1093/mnras/staa3277">10.1093/mnras/staa3277</a>.
  short: R. Mackenzie, G. Pezzulli, S. Cantalupo, R.A. Marino, S. Lilly, S. Muzahid,
    J.J. Matthee, J. Schaye, L. Wisotzki, Monthly Notices of the Royal Astronomical
    Society 502 (2021) 494–509.
date_created: 2022-07-07T10:11:15Z
date_published: 2021-03-01T00:00:00Z
date_updated: 2022-08-18T10:56:28Z
day: '01'
doi: 10.1093/mnras/staa3277
extern: '1'
external_id:
  arxiv:
  - '2010.12589'
intvolume: '       502'
issue: '1'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
- 'techniques: imaging spectroscopy'
- intergalactic medium
- 'quasars: emission lines'
- 'quasars: general'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2010.12589
month: '03'
oa: 1
oa_version: Preprint
page: 494-509
publication: Monthly Notices of the Royal Astronomical Society
publication_identifier:
  eissn:
  - 1365-2966
  issn:
  - 0035-8711
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Revealing the impact of quasar luminosity on giant Lyα nebulae
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 502
year: '2021'
...
---
_id: '11585'
abstract:
- lang: eng
  text: "Observations show that star-forming galaxies reside on a tight three-dimensional
    plane between mass, gas-phase metallicity and star formation rate (SFR), which
    can be explained by the interplay between metal-poor gas inflows, SFR and outflows.
    However, different metals are released on different time-scales, which may affect
    the slope of this relation. Here, we use central, star-forming galaxies with Mstar
    = 109.0−10.5 M\f from the EAGLE hydrodynamical simulation to examine three-dimensional
    relations between mass, SFR and chemical enrichment using absolute and relative
    C, N, O and Fe abundances. We show that the scatter is smaller when gas-phase
    α-enhancement is used rather than metallicity. A similar plane also exists for
    stellar α-enhancement, implying that present-day specific SFRs are correlated
    with long time-scale star formation histories. Between z = 0 and 1, the α-enhancement
    plane is even more insensitive to redshift than the plane using metallicity. However,
    it evolves at z > 1 due to lagging iron yields. At fixed mass, galaxies with higher
    SFRs have star formation histories shifted toward late times, are more α-enhanced
    and this α-enhancement increases with redshift as observed. These findings suggest
    that relations between physical properties inferred from observations may be affected
    by systematic variations in α-enhancements."
acknowledgement: We thank the anonymous referee for their constructive comments. JM
  acknowledges the support of a Huygens PhD fellowship from Leiden University. We
  thank Jarle Brinchmann, Rob Crain and David Sobral for discussions. We acknowledge
  the use of the Topcat software (Taylor 2013) for assisting in rapid exploration
  of multi-dimensional datasets and the use of Python and its numpy, matplotlib and
  pandas packages.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Jorryt J
  full_name: Matthee, Jorryt J
  id: 7439a258-f3c0-11ec-9501-9df22fe06720
  last_name: Matthee
  orcid: 0000-0003-2871-127X
citation:
  ama: Matthee JJ. Differences in galaxy colours are not just about the mass. <i>Nature
    Astronomy</i>. 2021;5:984-985. doi:<a href="https://doi.org/10.1038/s41550-021-01415-y">10.1038/s41550-021-01415-y</a>
  apa: Matthee, J. J. (2021). Differences in galaxy colours are not just about the
    mass. <i>Nature Astronomy</i>. Springer Nature. <a href="https://doi.org/10.1038/s41550-021-01415-y">https://doi.org/10.1038/s41550-021-01415-y</a>
  chicago: Matthee, Jorryt J. “Differences in Galaxy Colours Are Not Just about the
    Mass.” <i>Nature Astronomy</i>. Springer Nature, 2021. <a href="https://doi.org/10.1038/s41550-021-01415-y">https://doi.org/10.1038/s41550-021-01415-y</a>.
  ieee: J. J. Matthee, “Differences in galaxy colours are not just about the mass,”
    <i>Nature Astronomy</i>, vol. 5. Springer Nature, pp. 984–985, 2021.
  ista: Matthee JJ. 2021. Differences in galaxy colours are not just about the mass.
    Nature Astronomy. 5, 984–985.
  mla: Matthee, Jorryt J. “Differences in Galaxy Colours Are Not Just about the Mass.”
    <i>Nature Astronomy</i>, vol. 5, Springer Nature, 2021, pp. 984–85, doi:<a href="https://doi.org/10.1038/s41550-021-01415-y">10.1038/s41550-021-01415-y</a>.
  short: J.J. Matthee, Nature Astronomy 5 (2021) 984–985.
date_created: 2022-07-14T13:13:39Z
date_published: 2021-07-05T00:00:00Z
date_updated: 2022-08-19T08:37:58Z
day: '05'
doi: 10.1038/s41550-021-01415-y
extern: '1'
external_id:
  arxiv:
  - '1802.06786'
intvolume: '         5'
keyword:
- Astronomy and Astrophysics
- galaxies
- formation - galaxies
- evolution - galaxies
- star formation - galaxies
- abundances
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1802.06786
month: '07'
oa: 1
oa_version: Preprint
page: 984-985
publication: Nature Astronomy
publication_identifier:
  eissn:
  - 2397-3366
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Differences in galaxy colours are not just about the mass
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 5
year: '2021'
...
---
_id: '11604'
abstract:
- lang: eng
  text: The NASA Transiting Exoplanet Survey Satellite (TESS) is observing tens of
    millions of stars with time spans ranging from ∼27 days to about 1 yr of continuous
    observations. This vast amount of data contains a wealth of information for variability,
    exoplanet, and stellar astrophysics studies but requires a number of processing
    steps before it can be fully utilized. In order to efficiently process all the
    TESS data and make it available to the wider scientific community, the TESS Data
    for Asteroseismology working group, as part of the TESS Asteroseismic Science
    Consortium, has created an automated open-source processing pipeline to produce
    light curves corrected for systematics from the short- and long-cadence raw photometry
    data and to classify these according to stellar variability type. We will process
    all stars down to a TESS magnitude of 15. This paper is the next in a series detailing
    how the pipeline works. Here, we present our methodology for the automatic variability
    classification of TESS photometry using an ensemble of supervised learners that
    are combined into a metaclassifier. We successfully validate our method using
    a carefully constructed labeled sample of Kepler Q9 light curves with a 27.4 days
    time span mimicking single-sector TESS observations, on which we obtain an overall
    accuracy of 94.9%. We demonstrate that our methodology can successfully classify
    stars outside of our labeled sample by applying it to all ∼167,000 stars observed
    in Q9 of the Kepler space mission.
acknowledgement: "The research leading to these results has received funding from
  the European Research Council (ERC) under the European Union's Horizon 2020 research
  and innovation program (grant agreement No. 670519: MAMSIE), from the KU Leuven
  Research Council (grant C16/18/005: PARADISE), from the Research Foundation Flanders
  (FWO) under grant agreement G0H5416N (ERC Runner Up Project), as well as from the
  BELgian federal Science Policy Office (BELSPO) through PRODEX grant PLATO. D.J.A
  acknowledges support from the STFC via an Ernest Rutherford Fellowship (ST/R00384X/1).
  Funding for the Stellar Astrophysics Centre is provided by The Danish National Research
  Foundation (grant agreement No.: DNRF106). R.H. and M.N.L. acknowledge the ESA PRODEX
  program. This research was supported by the National Aeronautics and Space Administration
  (80NSSC18K1585 and 80NSSC19K0379) awarded through the TESS Guest Investigator Program.
  K.J.B. is supported by the National Science Foundation under Award AST-1903828.
  J.S.K and K.J.B. were supported by funding from the European Research Council under
  the European Community's Seventh Framework Programme (FP7/2007-2013)/ERC grant agreement
  no. 338251 (StellarAges). D.M.B. gratefully acknowledges funding from a senior postdoctoral
  fellowship from the Research Foundation Flanders (FWO) with grant agreement No.
  1286521N. The research leading to these results has received funding from the Research
  Foundation Flanders (FWO) under grant agreement G0A2917N (BlackGEM). R.A.G. acknowledges
  support from the GOLF and PLATO CNES grants. L.M. was supported by the Premium Postdoctoral
  Research Program of the Hungarian Academy of Sciences. The research leading to these
  results has been supported by the Hungarian National Research, Development, and
  Innovation Office (NKFIH) grant KH_18 130405 and the Lendület LP2014-17 and LP2018-7/2020
  grants of the Hungarian Academy of Sciences. D.B. acknowledges support from the
  NASA TESS Guest Investigator Program under award 80NSSC19K0385.\r\n\r\nThis paper
  includes data collected by the TESS mission, which are publicly available from the
  Mikulski Archive for Space Telescopes (MAST). Funding for the TESS mission is provided
  by NASA's Science Mission directorate. This research has made use of NASA's Astrophysics
  Data System as well as the NASA/IPAC Extragalactic Database (NED) which is operated
  by the Jet Propulsion Laboratory, California Institute of Technology, under contract
  with the National Aeronautics and Space Administration. Funding for the TESS Asteroseismic
  Science Operations Centre is provided by the Danish National Research Foundation
  (Grant agreement no.: DNRF106), ESA PRODEX (PEA 4000119301), and the Stellar Astrophysics
  Centre (SAC) at Aarhus University. We thank the TESS team and staff and TASC/TASOC
  for their support of the present work.\r\n\r\nThis paper includes data collected
  by the Kepler mission. Funding for the Kepler and K2 mission was provided by NASA's
  Science Mission Directorate. The authors acknowledge the efforts of the Kepler Mission
  team in obtaining the light-curve data and data validation products used in this
  publication. These data were generated by the Kepler Mission science pipeline through
  the efforts of the Kepler Science Operations Center and Science Office. The Kepler
  light curves are archived at the Mikulski Archive for Space Telescopes.\r\n\r\nThe
  numerical results presented in this work were obtained at the Centre for Scientific
  Computing, Aarhus. 37 This research made use of Astropy, a community-developed core
  Python package for Astronomy (Astropy Collaboration et al. 2013, 2018).\r\n\r\nSoftware:
  Scikit-learn (Pedregosa et al. 2011), Numpy (Harris et al. 2020), Astropy (Astropy
  Collaboration et al. 2013, 2018), Scipy (Virtanen et al. 2020), Pandas (McKinney
  2010; Pandas Development Team 2020), Lightkurve (Lightkurve Collaboration et al.
  2018), XGBoost (Chen & Guestrin 2016), Tensorflow (Abadi et al. 2015)."
article_number: '209'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: J.
  full_name: Audenaert, J.
  last_name: Audenaert
- first_name: J. S.
  full_name: Kuszlewicz, J. S.
  last_name: Kuszlewicz
- first_name: R.
  full_name: Handberg, R.
  last_name: Handberg
- first_name: A.
  full_name: Tkachenko, A.
  last_name: Tkachenko
- first_name: D. J.
  full_name: Armstrong, D. J.
  last_name: Armstrong
- first_name: M.
  full_name: Hon, M.
  last_name: Hon
- first_name: R.
  full_name: Kgoadi, R.
  last_name: Kgoadi
- first_name: M. N.
  full_name: Lund, M. N.
  last_name: Lund
- first_name: K. J.
  full_name: Bell, K. J.
  last_name: Bell
- first_name: Lisa Annabelle
  full_name: Bugnet, Lisa Annabelle
  id: d9edb345-f866-11ec-9b37-d119b5234501
  last_name: Bugnet
  orcid: 0000-0003-0142-4000
- first_name: D. M.
  full_name: Bowman, D. M.
  last_name: Bowman
- first_name: C.
  full_name: Johnston, C.
  last_name: Johnston
- first_name: R. A.
  full_name: García, R. A.
  last_name: García
- first_name: D.
  full_name: Stello, D.
  last_name: Stello
- first_name: L.
  full_name: Molnár, L.
  last_name: Molnár
- first_name: E.
  full_name: Plachy, E.
  last_name: Plachy
- first_name: D.
  full_name: Buzasi, D.
  last_name: Buzasi
- first_name: C.
  full_name: Aerts, C.
  last_name: Aerts
citation:
  ama: 'Audenaert J, Kuszlewicz JS, Handberg R, et al. TESS Data for Asteroseismology
    (T’DA) stellar variability classification pipeline: Setup and application to the
    Kepler Q9 data. <i>The Astronomical Journal</i>. 2021;162(5). doi:<a href="https://doi.org/10.3847/1538-3881/ac166a">10.3847/1538-3881/ac166a</a>'
  apa: 'Audenaert, J., Kuszlewicz, J. S., Handberg, R., Tkachenko, A., Armstrong,
    D. J., Hon, M., … Aerts, C. (2021). TESS Data for Asteroseismology (T’DA) stellar
    variability classification pipeline: Setup and application to the Kepler Q9 data.
    <i>The Astronomical Journal</i>. IOP Publishing. <a href="https://doi.org/10.3847/1538-3881/ac166a">https://doi.org/10.3847/1538-3881/ac166a</a>'
  chicago: 'Audenaert, J., J. S. Kuszlewicz, R. Handberg, A. Tkachenko, D. J. Armstrong,
    M. Hon, R. Kgoadi, et al. “TESS Data for Asteroseismology (T’DA) Stellar Variability
    Classification Pipeline: Setup and Application to the Kepler Q9 Data.” <i>The
    Astronomical Journal</i>. IOP Publishing, 2021. <a href="https://doi.org/10.3847/1538-3881/ac166a">https://doi.org/10.3847/1538-3881/ac166a</a>.'
  ieee: 'J. Audenaert <i>et al.</i>, “TESS Data for Asteroseismology (T’DA) stellar
    variability classification pipeline: Setup and application to the Kepler Q9 data,”
    <i>The Astronomical Journal</i>, vol. 162, no. 5. IOP Publishing, 2021.'
  ista: 'Audenaert J, Kuszlewicz JS, Handberg R, Tkachenko A, Armstrong DJ, Hon M,
    Kgoadi R, Lund MN, Bell KJ, Bugnet LA, Bowman DM, Johnston C, García RA, Stello
    D, Molnár L, Plachy E, Buzasi D, Aerts C. 2021. TESS Data for Asteroseismology
    (T’DA) stellar variability classification pipeline: Setup and application to the
    Kepler Q9 data. The Astronomical Journal. 162(5), 209.'
  mla: 'Audenaert, J., et al. “TESS Data for Asteroseismology (T’DA) Stellar Variability
    Classification Pipeline: Setup and Application to the Kepler Q9 Data.” <i>The
    Astronomical Journal</i>, vol. 162, no. 5, 209, IOP Publishing, 2021, doi:<a href="https://doi.org/10.3847/1538-3881/ac166a">10.3847/1538-3881/ac166a</a>.'
  short: J. Audenaert, J.S. Kuszlewicz, R. Handberg, A. Tkachenko, D.J. Armstrong,
    M. Hon, R. Kgoadi, M.N. Lund, K.J. Bell, L.A. Bugnet, D.M. Bowman, C. Johnston,
    R.A. García, D. Stello, L. Molnár, E. Plachy, D. Buzasi, C. Aerts, The Astronomical
    Journal 162 (2021).
date_created: 2022-07-18T11:54:55Z
date_published: 2021-10-21T00:00:00Z
date_updated: 2022-08-19T10:01:56Z
day: '21'
doi: 10.3847/1538-3881/ac166a
extern: '1'
external_id:
  arxiv:
  - '2107.06301'
intvolume: '       162'
issue: '5'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2107.06301
month: '10'
oa: 1
oa_version: Preprint
publication: The Astronomical Journal
publication_identifier:
  eissn:
  - 1538-3881
  issn:
  - 0004-6256
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'TESS Data for Asteroseismology (T’DA) stellar variability classification pipeline:
  Setup and application to the Kepler Q9 data'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 162
year: '2021'
...
---
_id: '11605'
abstract:
- lang: eng
  text: "Context. The discovery of moderate differential rotation between the core
    and the envelope of evolved solar-like stars could be the signature of a strong
    magnetic field trapped inside the radiative interior. The population of intermediate-mass
    red giants presenting surprisingly low-amplitude mixed modes (i.e. oscillation
    modes that behave as acoustic modes in their external envelope and as gravity
    modes in their core) could also arise from the effect of an internal magnetic
    field. Indeed, stars more massive than about 1.1 solar masses are known to develop
    a convective core during their main sequence. The field generated by the dynamo
    triggered by this convection could be the progenitor of a strong fossil magnetic
    field trapped inside the core of the star for the remainder of its evolution.\r\n\r\nAims.
    Observations of mixed modes can constitute an excellent probe of the deepest layers
    of evolved solar-like stars, and magnetic fields in those regions can impact their
    propagation. The magnetic perturbation on mixed modes may therefore be visible
    in asteroseismic data. To unravel which constraints can be obtained from observations,
    we theoretically investigate the effects of a plausible mixed axisymmetric magnetic
    field with various amplitudes on the mixed-mode frequencies of evolved solar-like
    stars.\r\n\r\nMethods. First-order frequency perturbations due to an axisymmetric
    magnetic field were computed for dipolar and quadrupolar mixed modes. These computations
    were carried out for a range of stellar ages, masses, and metallicities.\r\n\r\nConclusions.
    We show that typical fossil-field strengths of 0.1 − 1 MG, consistent with the
    presence of a dynamo in the convective core during the main sequence, provoke
    significant asymmetries on mixed-mode frequency multiplets during the red giant
    branch. We provide constraints and methods for the detectability of such magnetic
    signatures. We show that these signatures may be detectable in asteroseismic data
    for field amplitudes small enough for the amplitude of the modes not to be affected
    by the conversion of gravity into Alfvén waves inside the magnetised interior.
    Finally, we infer an upper limit for the strength of the field and the associated
    lower limit for the timescale of its action in order to redistribute angular momentum
    in stellar interiors."
article_number: A53
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Lisa Annabelle
  full_name: Bugnet, Lisa Annabelle
  id: d9edb345-f866-11ec-9b37-d119b5234501
  last_name: Bugnet
  orcid: 0000-0003-0142-4000
- first_name: V.
  full_name: Prat, V.
  last_name: Prat
- first_name: S.
  full_name: Mathis, S.
  last_name: Mathis
- first_name: A.
  full_name: Astoul, A.
  last_name: Astoul
- first_name: K.
  full_name: Augustson, K.
  last_name: Augustson
- first_name: R. A.
  full_name: García, R. A.
  last_name: García
- first_name: S.
  full_name: Mathur, S.
  last_name: Mathur
- first_name: L.
  full_name: Amard, L.
  last_name: Amard
- first_name: C.
  full_name: Neiner, C.
  last_name: Neiner
citation:
  ama: 'Bugnet LA, Prat V, Mathis S, et al. Magnetic signatures on mixed-mode frequencies:
    I. An axisymmetric fossil field inside the core of red giants. <i>Astronomy &#38;
    Astrophysics</i>. 2021;650. doi:<a href="https://doi.org/10.1051/0004-6361/202039159">10.1051/0004-6361/202039159</a>'
  apa: 'Bugnet, L. A., Prat, V., Mathis, S., Astoul, A., Augustson, K., García, R.
    A., … Neiner, C. (2021). Magnetic signatures on mixed-mode frequencies: I. An
    axisymmetric fossil field inside the core of red giants. <i>Astronomy &#38; Astrophysics</i>.
    EDP Sciences. <a href="https://doi.org/10.1051/0004-6361/202039159">https://doi.org/10.1051/0004-6361/202039159</a>'
  chicago: 'Bugnet, Lisa Annabelle, V. Prat, S. Mathis, A. Astoul, K. Augustson, R.
    A. García, S. Mathur, L. Amard, and C. Neiner. “Magnetic Signatures on Mixed-Mode
    Frequencies: I. An Axisymmetric Fossil Field inside the Core of Red Giants.” <i>Astronomy
    &#38; Astrophysics</i>. EDP Sciences, 2021. <a href="https://doi.org/10.1051/0004-6361/202039159">https://doi.org/10.1051/0004-6361/202039159</a>.'
  ieee: 'L. A. Bugnet <i>et al.</i>, “Magnetic signatures on mixed-mode frequencies:
    I. An axisymmetric fossil field inside the core of red giants,” <i>Astronomy &#38;
    Astrophysics</i>, vol. 650. EDP Sciences, 2021.'
  ista: 'Bugnet LA, Prat V, Mathis S, Astoul A, Augustson K, García RA, Mathur S,
    Amard L, Neiner C. 2021. Magnetic signatures on mixed-mode frequencies: I. An
    axisymmetric fossil field inside the core of red giants. Astronomy &#38; Astrophysics.
    650, A53.'
  mla: 'Bugnet, Lisa Annabelle, et al. “Magnetic Signatures on Mixed-Mode Frequencies:
    I. An Axisymmetric Fossil Field inside the Core of Red Giants.” <i>Astronomy &#38;
    Astrophysics</i>, vol. 650, A53, EDP Sciences, 2021, doi:<a href="https://doi.org/10.1051/0004-6361/202039159">10.1051/0004-6361/202039159</a>.'
  short: L.A. Bugnet, V. Prat, S. Mathis, A. Astoul, K. Augustson, R.A. García, S.
    Mathur, L. Amard, C. Neiner, Astronomy &#38; Astrophysics 650 (2021).
date_created: 2022-07-18T12:10:59Z
date_published: 2021-06-07T00:00:00Z
date_updated: 2022-08-19T10:06:33Z
day: '07'
doi: 10.1051/0004-6361/202039159
extern: '1'
external_id:
  arxiv:
  - '2102.01216'
intvolume: '       650'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
- stars
- oscillations / stars
- magnetic field / stars
- interiors / stars
- evolution / stars
- rotation
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2102.01216
month: '06'
oa: 1
oa_version: Preprint
publication: Astronomy & Astrophysics
publication_identifier:
  eissn:
  - 1432-0746
  issn:
  - 0004-6361
publication_status: published
publisher: EDP Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Magnetic signatures on mixed-mode frequencies: I. An axisymmetric fossil field
  inside the core of red giants'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 650
year: '2021'
...
---
_id: '11606'
abstract:
- lang: eng
  text: "Context. Our knowledge of the dynamics of stars has undergone a revolution
    through the simultaneous large amount of high-quality photometric observations
    collected by space-based asteroseismology and ground-based high-precision spectropolarimetry.
    They allowed us to probe the internal rotation of stars and their surface magnetism
    in the whole Hertzsprung-Russell diagram. However, new methods should still be
    developed to probe the deep magnetic fields in these stars.\r\n\r\nAims. Our goal
    is to provide seismic diagnoses that allow us to probe the internal magnetism
    of stars.\r\n\r\nMethods. We focused on asymptotic low-frequency gravity modes
    and high-frequency acoustic modes. Using a first-order perturbative theory, we
    derived magnetic splittings of their frequencies as explicit functions of stellar
    parameters.\r\n\r\nResults. As in the case of rotation, we show that asymptotic
    gravity and acoustic modes can allow us to probe the different components of the
    magnetic field in the cavities in which they propagate. This again demonstrates
    the high potential of using mixed-modes when this is possible."
acknowledgement: The authors thank the referee and Pr. J. Christensen-Dalsgaard for
  their very constructive comments and remarks that allowed us to improve the article.
  St. M., L. B., V. P., and K. A. acknowledge support from the European Research Council
  through ERC grant SPIRE 647383. All the members from CEA acknowledge support from
  GOLF and PLATO CNES grants of the Astrophysics Division at CEA. S. Mathur acknowledges
  support by the Ramon y Cajal fellowship number RYC-2015-17697. We made great use
  of the megyr python package for interfacing MESA and GYRE codes.
article_number: A122
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: S.
  full_name: Mathis, S.
  last_name: Mathis
- first_name: Lisa Annabelle
  full_name: Bugnet, Lisa Annabelle
  id: d9edb345-f866-11ec-9b37-d119b5234501
  last_name: Bugnet
  orcid: 0000-0003-0142-4000
- first_name: V.
  full_name: Prat, V.
  last_name: Prat
- first_name: K.
  full_name: Augustson, K.
  last_name: Augustson
- first_name: S.
  full_name: Mathur, S.
  last_name: Mathur
- first_name: R. A.
  full_name: Garcia, R. A.
  last_name: Garcia
citation:
  ama: Mathis S, Bugnet LA, Prat V, Augustson K, Mathur S, Garcia RA. Probing the
    internal magnetism of stars using asymptotic magneto-asteroseismology. <i>Astronomy
    &#38; Astrophysics</i>. 2021;647. doi:<a href="https://doi.org/10.1051/0004-6361/202039180">10.1051/0004-6361/202039180</a>
  apa: Mathis, S., Bugnet, L. A., Prat, V., Augustson, K., Mathur, S., &#38; Garcia,
    R. A. (2021). Probing the internal magnetism of stars using asymptotic magneto-asteroseismology.
    <i>Astronomy &#38; Astrophysics</i>. EDP Sciences. <a href="https://doi.org/10.1051/0004-6361/202039180">https://doi.org/10.1051/0004-6361/202039180</a>
  chicago: Mathis, S., Lisa Annabelle Bugnet, V. Prat, K. Augustson, S. Mathur, and
    R. A. Garcia. “Probing the Internal Magnetism of Stars Using Asymptotic Magneto-Asteroseismology.”
    <i>Astronomy &#38; Astrophysics</i>. EDP Sciences, 2021. <a href="https://doi.org/10.1051/0004-6361/202039180">https://doi.org/10.1051/0004-6361/202039180</a>.
  ieee: S. Mathis, L. A. Bugnet, V. Prat, K. Augustson, S. Mathur, and R. A. Garcia,
    “Probing the internal magnetism of stars using asymptotic magneto-asteroseismology,”
    <i>Astronomy &#38; Astrophysics</i>, vol. 647. EDP Sciences, 2021.
  ista: Mathis S, Bugnet LA, Prat V, Augustson K, Mathur S, Garcia RA. 2021. Probing
    the internal magnetism of stars using asymptotic magneto-asteroseismology. Astronomy
    &#38; Astrophysics. 647, A122.
  mla: Mathis, S., et al. “Probing the Internal Magnetism of Stars Using Asymptotic
    Magneto-Asteroseismology.” <i>Astronomy &#38; Astrophysics</i>, vol. 647, A122,
    EDP Sciences, 2021, doi:<a href="https://doi.org/10.1051/0004-6361/202039180">10.1051/0004-6361/202039180</a>.
  short: S. Mathis, L.A. Bugnet, V. Prat, K. Augustson, S. Mathur, R.A. Garcia, Astronomy
    &#38; Astrophysics 647 (2021).
date_created: 2022-07-18T12:15:27Z
date_published: 2021-03-18T00:00:00Z
date_updated: 2022-08-19T10:11:52Z
day: '18'
doi: 10.1051/0004-6361/202039180
extern: '1'
external_id:
  arxiv:
  - '2012.11050'
intvolume: '       647'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
- asteroseismology / waves / stars
- magnetic field / stars
- oscillations / methods
- analytical
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2012.11050
month: '03'
oa: 1
oa_version: Preprint
publication: Astronomy & Astrophysics
publication_identifier:
  eissn:
  - 1432-0746
  issn:
  - 0004-6361
publication_status: published
publisher: EDP Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: Probing the internal magnetism of stars using asymptotic magneto-asteroseismology
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 647
year: '2021'
...
---
_id: '11608'
abstract:
- lang: eng
  text: 'In order to understand stellar evolution, it is crucial to efficiently determine
    stellar surface rotation periods. Indeed, while they are of great importance in
    stellar models, angular momentum transport processes inside stars are still poorly
    understood today. Surface rotation, which is linked to the age of the star, is
    one of the constraints needed to improve the way those processes are modelled.
    Statistics of the surface rotation periods for a large sample of stars of different
    spectral types are thus necessary. An efficient tool to automatically determine
    reliable rotation periods is needed when dealing with large samples of stellar
    photometric datasets. The objective of this work is to develop such a tool. For
    this purpose, machine learning classifiers constitute relevant bases to build
    our new methodology. Random forest learning abilities are exploited to automate
    the extraction of rotation periods in Kepler light curves. Rotation periods and
    complementary parameters are obtained via three different methods: a wavelet analysis,
    the autocorrelation function of the light curve, and the composite spectrum. We
    trained three different classifiers: one to detect if rotational modulations are
    present in the light curve, one to flag close binary or classical pulsators candidates
    that can bias our rotation period determination, and finally one classifier to
    provide the final rotation period. We tested our machine learning pipeline on
    23 431 stars of the Kepler K and M dwarf reference rotation catalogue for which
    60% of the stars have been visually inspected. For the sample of 21 707 stars
    where all the input parameters are provided to the algorithm, 94.2% of them are
    correctly classified (as rotating or not). Among the stars that have a rotation
    period in the reference catalogue, the machine learning provides a period that
    agrees within 10% of the reference value for 95.3% of the stars. Moreover, the
    yield of correct rotation periods is raised to 99.5% after visually inspecting
    25.2% of the stars. Over the two main analysis steps, rotation classification
    and period selection, the pipeline yields a global agreement with the reference
    values of 92.1% and 96.9% before and after visual inspection. Random forest classifiers
    are efficient tools to determine reliable rotation periods in large samples of
    stars. The methodology presented here could be easily adapted to extract surface
    rotation periods for stars with different spectral types or observed by other
    instruments such as K2, TESS or by PLATO in the near future.'
acknowledgement: 'We thank Suzanne Aigrain and Joe Llama for providing us with the
  simulated data used in Aigrain et al. (2015). S. N. B., L. B. and R. A. G. acknowledge
  the support from PLATO and GOLF CNES grants. A. R. G. S. acknowledges the support
  from NASA under grant NNX17AF27G. S. M. acknowledges the support from the Spanish
  Ministry of Science and Innovation with the Ramon y Cajal fellowship number RYC-2015-17697.
  P. L. P. and S. M. acknowledge support from the Spanish Ministry of Science and
  Innovation with the grant number PID2019-107187GB-I00. This research has made use
  of the NASA Exoplanet Archive, which is operated by the California Institute of
  Technology, under contract with the National Aeronautics and Space Administration
  under the Exoplanet Exploration Program. Software: Python (Van Rossum & Drake 2009),
  numpy (Oliphant 2006), pandas (The pandas development team 2020; McKinney 2010),
  matplotlib (Hunter 2007), scikit-learn (Pedregosa et al. 2011). The source code
  used to obtain the present results can be found at: https://gitlab.com/sybreton/pushkin
  ; https://gitlab.com/sybreton/ml_surface_rotation_paper .'
article_number: A125
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: S. N.
  full_name: Breton, S. N.
  last_name: Breton
- first_name: A. R. G.
  full_name: Santos, A. R. G.
  last_name: Santos
- first_name: Lisa Annabelle
  full_name: Bugnet, Lisa Annabelle
  id: d9edb345-f866-11ec-9b37-d119b5234501
  last_name: Bugnet
  orcid: 0000-0003-0142-4000
- first_name: S.
  full_name: Mathur, S.
  last_name: Mathur
- first_name: R. A.
  full_name: García, R. A.
  last_name: García
- first_name: P. L.
  full_name: Pallé, P. L.
  last_name: Pallé
citation:
  ama: 'Breton SN, Santos ARG, Bugnet LA, Mathur S, García RA, Pallé PL. ROOSTER:
    A machine-learning analysis tool for Kepler stellar rotation periods. <i>Astronomy
    &#38; Astrophysics</i>. 2021;647. doi:<a href="https://doi.org/10.1051/0004-6361/202039947">10.1051/0004-6361/202039947</a>'
  apa: 'Breton, S. N., Santos, A. R. G., Bugnet, L. A., Mathur, S., García, R. A.,
    &#38; Pallé, P. L. (2021). ROOSTER: A machine-learning analysis tool for Kepler
    stellar rotation periods. <i>Astronomy &#38; Astrophysics</i>. EDP Sciences. <a
    href="https://doi.org/10.1051/0004-6361/202039947">https://doi.org/10.1051/0004-6361/202039947</a>'
  chicago: 'Breton, S. N., A. R. G. Santos, Lisa Annabelle Bugnet, S. Mathur, R. A.
    García, and P. L. Pallé. “ROOSTER: A Machine-Learning Analysis Tool for Kepler
    Stellar Rotation Periods.” <i>Astronomy &#38; Astrophysics</i>. EDP Sciences,
    2021. <a href="https://doi.org/10.1051/0004-6361/202039947">https://doi.org/10.1051/0004-6361/202039947</a>.'
  ieee: 'S. N. Breton, A. R. G. Santos, L. A. Bugnet, S. Mathur, R. A. García, and
    P. L. Pallé, “ROOSTER: A machine-learning analysis tool for Kepler stellar rotation
    periods,” <i>Astronomy &#38; Astrophysics</i>, vol. 647. EDP Sciences, 2021.'
  ista: 'Breton SN, Santos ARG, Bugnet LA, Mathur S, García RA, Pallé PL. 2021. ROOSTER:
    A machine-learning analysis tool for Kepler stellar rotation periods. Astronomy
    &#38; Astrophysics. 647, A125.'
  mla: 'Breton, S. N., et al. “ROOSTER: A Machine-Learning Analysis Tool for Kepler
    Stellar Rotation Periods.” <i>Astronomy &#38; Astrophysics</i>, vol. 647, A125,
    EDP Sciences, 2021, doi:<a href="https://doi.org/10.1051/0004-6361/202039947">10.1051/0004-6361/202039947</a>.'
  short: S.N. Breton, A.R.G. Santos, L.A. Bugnet, S. Mathur, R.A. García, P.L. Pallé,
    Astronomy &#38; Astrophysics 647 (2021).
date_created: 2022-07-18T12:21:32Z
date_published: 2021-03-19T00:00:00Z
date_updated: 2022-08-22T08:47:47Z
day: '19'
doi: 10.1051/0004-6361/202039947
extern: '1'
external_id:
  arxiv:
  - '2101.10152'
intvolume: '       647'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
- 'methods: data analysis / stars: solar-type / stars: activity / stars: rotation
  / starspots'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2101.10152
month: '03'
oa: 1
oa_version: Preprint
publication: Astronomy & Astrophysics
publication_identifier:
  eissn:
  - 1432-0746
  issn:
  - 0004-6361
publication_status: published
publisher: EDP Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'ROOSTER: A machine-learning analysis tool for Kepler stellar rotation periods'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 647
year: '2021'
...
---
_id: '11609'
abstract:
- lang: eng
  text: "Context. Stellar interiors are the seat of efficient transport of angular
    momentum all along their evolution. In this context, understanding the dependence
    of the turbulent transport triggered by the instabilities of the vertical and
    horizontal shears of the differential rotation in stellar radiation zones as a
    function of their rotation, stratification, and thermal diffusivity is mandatory.
    Indeed, it constitutes one of the cornerstones of the rotational transport and
    mixing theory, which is implemented in stellar evolution codes to predict the
    rotational and chemical evolutions of stars.\r\n\r\nAims. We investigate horizontal
    shear instabilities in rotating stellar radiation zones by considering the full
    Coriolis acceleration with both the dimensionless horizontal Coriolis component
    f̃ and the vertical component f.\r\n\r\nMethods. We performed a linear stability
    analysis using linearized equations derived from the Navier-Stokes and heat transport
    equations in the rotating nontraditional f-plane. We considered a horizontal shear
    flow with a hyperbolic tangent profile as the base flow. The linear stability
    was analyzed numerically in wide ranges of parameters, and we performed an asymptotic
    analysis for large vertical wavenumbers using the Wentzel-Kramers-Brillouin-Jeffreys
    (WKBJ) approximation for nondiffusive and highly-diffusive fluids.\r\n\r\nResults.
    As in the traditional f-plane approximation, we identify two types of instabilities:
    the inflectional and inertial instabilities. The inflectional instability is destabilized
    as f̃ increases and its maximum growth rate increases significantly, while the
    thermal diffusivity stabilizes the inflectional instability similarly to the traditional
    case. The inertial instability is also strongly affected; for instance, the inertially
    unstable regime is also extended in the nondiffusive limit as 0 < f < 1 + f̃ 2/N2,
    where N is the dimensionless Brunt-Väisälä frequency. More strikingly, in the
    high thermal diffusivity limit, it is always inertially unstable at any colatitude
    θ except at the poles (i.e., 0° < θ <  180°). We also derived the critical Reynolds
    numbers for the inertial instability using the asymptotic dispersion relations
    obtained from the WKBJ analysis. Using the asymptotic and numerical results, we
    propose a prescription for the effective turbulent viscosities induced by the
    inertial and inflectional instabilities that can be possibly used in stellar evolution
    models. The characteristic time of this turbulence is short enough so that it
    is efficient to redistribute angular momentum and to mix chemicals in stellar
    radiation zones."
acknowledgement: The authors acknowledge support from the European Research Council
  through ERC grant SPIRE 647383 and from GOLF and PLATO CNES grants at the Department
  of Astrophysics at CEA Paris-Saclay. We thank the referee, Prof. A. J. Barker, for
  his constructive comments that allow us to improve the article.
article_number: A64
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: J.
  full_name: Park, J.
  last_name: Park
- first_name: V.
  full_name: Prat, V.
  last_name: Prat
- first_name: S.
  full_name: Mathis, S.
  last_name: Mathis
- first_name: Lisa Annabelle
  full_name: Bugnet, Lisa Annabelle
  id: d9edb345-f866-11ec-9b37-d119b5234501
  last_name: Bugnet
  orcid: 0000-0003-0142-4000
citation:
  ama: 'Park J, Prat V, Mathis S, Bugnet LA. Horizontal shear instabilities in rotating
    stellar radiation zones: II. Effects of the full Coriolis acceleration. <i>Astronomy
    &#38; Astrophysics</i>. 2021;646. doi:<a href="https://doi.org/10.1051/0004-6361/202038654">10.1051/0004-6361/202038654</a>'
  apa: 'Park, J., Prat, V., Mathis, S., &#38; Bugnet, L. A. (2021). Horizontal shear
    instabilities in rotating stellar radiation zones: II. Effects of the full Coriolis
    acceleration. <i>Astronomy &#38; Astrophysics</i>. EDP Sciences. <a href="https://doi.org/10.1051/0004-6361/202038654">https://doi.org/10.1051/0004-6361/202038654</a>'
  chicago: 'Park, J., V. Prat, S. Mathis, and Lisa Annabelle Bugnet. “Horizontal Shear
    Instabilities in Rotating Stellar Radiation Zones: II. Effects of the Full Coriolis
    Acceleration.” <i>Astronomy &#38; Astrophysics</i>. EDP Sciences, 2021. <a href="https://doi.org/10.1051/0004-6361/202038654">https://doi.org/10.1051/0004-6361/202038654</a>.'
  ieee: 'J. Park, V. Prat, S. Mathis, and L. A. Bugnet, “Horizontal shear instabilities
    in rotating stellar radiation zones: II. Effects of the full Coriolis acceleration,”
    <i>Astronomy &#38; Astrophysics</i>, vol. 646. EDP Sciences, 2021.'
  ista: 'Park J, Prat V, Mathis S, Bugnet LA. 2021. Horizontal shear instabilities
    in rotating stellar radiation zones: II. Effects of the full Coriolis acceleration.
    Astronomy &#38; Astrophysics. 646, A64.'
  mla: 'Park, J., et al. “Horizontal Shear Instabilities in Rotating Stellar Radiation
    Zones: II. Effects of the Full Coriolis Acceleration.” <i>Astronomy &#38; Astrophysics</i>,
    vol. 646, A64, EDP Sciences, 2021, doi:<a href="https://doi.org/10.1051/0004-6361/202038654">10.1051/0004-6361/202038654</a>.'
  short: J. Park, V. Prat, S. Mathis, L.A. Bugnet, Astronomy &#38; Astrophysics 646
    (2021).
date_created: 2022-07-18T13:24:32Z
date_published: 2021-02-08T00:00:00Z
date_updated: 2022-08-19T10:18:03Z
day: '08'
doi: 10.1051/0004-6361/202038654
extern: '1'
external_id:
  arxiv:
  - '2006.10660'
intvolume: '       646'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
- hydrodynamics / turbulence / stars
- rotation / stars
- evolution
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2006.10660
month: '02'
oa: 1
oa_version: Preprint
publication: Astronomy & Astrophysics
publication_identifier:
  eissn:
  - 1432-0746
  issn:
  - 0004-6361
publication_status: published
publisher: EDP Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Horizontal shear instabilities in rotating stellar radiation zones: II. Effects
  of the full Coriolis acceleration'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 646
year: '2021'
...
---
_id: '11649'
abstract:
- lang: eng
  text: 'While operating communication networks adaptively may improve utilization
    and performance, frequent adjustments also introduce an algorithmic challenge:
    the re-optimization of traffic engineering solutions is time-consuming and may
    limit the granularity at which a network can be adjusted. This paper is motivated
    by question whether the reactivity of a network can be improved by re-optimizing
    solutions dynamically rather than from scratch, especially if inputs such as link
    weights do not change significantly. This paper explores to what extent dynamic
    algorithms can be used to speed up fundamental tasks in network operations. We
    specifically investigate optimizations related to traffic engineering (namely
    shortest paths and maximum flow computations), but also consider spanning tree
    and matching applications. While prior work on dynamic graph algorithms focusses
    on link insertions and deletions, we are interested in the practical problem of
    link weight changes. We revisit existing upper bounds in the weight-dynamic model,
    and present several novel lower bounds on the amortized runtime for recomputing
    solutions. In general, we find that the potential performance gains depend on
    the application, and there are also strict limitations on what can be achieved,
    even if link weights change only slightly.'
article_processing_charge: No
arxiv: 1
author:
- first_name: Monika H
  full_name: Henzinger, Monika H
  id: 540c9bbd-f2de-11ec-812d-d04a5be85630
  last_name: Henzinger
  orcid: 0000-0002-5008-6530
- first_name: Ami
  full_name: Paz, Ami
  last_name: Paz
- first_name: Stefan
  full_name: Schmid, Stefan
  last_name: Schmid
citation:
  ama: 'Henzinger MH, Paz A, Schmid S. On the complexity of weight-dynamic network
    algorithms. In: <i>IFIP Networking Conference</i>. Institute of Electrical and
    Electronics Engineers; 2021. doi:<a href="https://doi.org/10.23919/ifipnetworking52078.2021.9472803">10.23919/ifipnetworking52078.2021.9472803</a>'
  apa: 'Henzinger, M. H., Paz, A., &#38; Schmid, S. (2021). On the complexity of weight-dynamic
    network algorithms. In <i>IFIP Networking Conference</i>.  Espoo and Helsinki,
    Finland: Institute of Electrical and Electronics Engineers. <a href="https://doi.org/10.23919/ifipnetworking52078.2021.9472803">https://doi.org/10.23919/ifipnetworking52078.2021.9472803</a>'
  chicago: Henzinger, Monika H, Ami Paz, and Stefan Schmid. “On the Complexity of
    Weight-Dynamic Network Algorithms.” In <i>IFIP Networking Conference</i>. Institute
    of Electrical and Electronics Engineers, 2021. <a href="https://doi.org/10.23919/ifipnetworking52078.2021.9472803">https://doi.org/10.23919/ifipnetworking52078.2021.9472803</a>.
  ieee: M. H. Henzinger, A. Paz, and S. Schmid, “On the complexity of weight-dynamic
    network algorithms,” in <i>IFIP Networking Conference</i>,  Espoo and Helsinki,
    Finland, 2021.
  ista: 'Henzinger MH, Paz A, Schmid S. 2021. On the complexity of weight-dynamic
    network algorithms. IFIP Networking Conference. IFIP: Networking.'
  mla: Henzinger, Monika H., et al. “On the Complexity of Weight-Dynamic Network Algorithms.”
    <i>IFIP Networking Conference</i>, Institute of Electrical and Electronics Engineers,
    2021, doi:<a href="https://doi.org/10.23919/ifipnetworking52078.2021.9472803">10.23919/ifipnetworking52078.2021.9472803</a>.
  short: M.H. Henzinger, A. Paz, S. Schmid, in:, IFIP Networking Conference, Institute
    of Electrical and Electronics Engineers, 2021.
conference:
  end_date: 2021-06-24
  location: ' Espoo and Helsinki, Finland'
  name: 'IFIP: Networking'
  start_date: 2021-06-21
date_created: 2022-07-25T11:13:06Z
date_published: 2021-06-21T00:00:00Z
date_updated: 2023-02-09T09:11:51Z
day: '21'
doi: 10.23919/ifipnetworking52078.2021.9472803
extern: '1'
external_id:
  arxiv:
  - '2105.13172'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: ' https://doi.org/10.48550/arXiv.2105.13172'
month: '06'
oa: 1
oa_version: Preprint
publication: IFIP Networking Conference
publication_identifier:
  eissn:
  - 1861-2288
publication_status: published
publisher: Institute of Electrical and Electronics Engineers
quality_controlled: '1'
scopus_import: '1'
status: public
title: On the complexity of weight-dynamic network algorithms
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2021'
...
---
_id: '11663'
abstract:
- lang: eng
  text: "Many dynamic graph algorithms have an amortized update time, rather than
    a stronger worst-case guarantee. But amortized data structures are not suitable
    for real-time systems, where each individual operation has to be executed quickly.
    For this reason, there exist many recent randomized results that aim to provide
    a guarantee stronger than amortized expected. The strongest possible guarantee
    for a randomized algorithm is that it is always correct (Las Vegas) and has high-probability
    worst-case update time, which gives a bound on the time for each individual operation
    that holds with high probability.\r\n\r\nIn this article, we present the first
    polylogarithmic high-probability worst-case time bounds for the dynamic spanner
    and the dynamic maximal matching problem.\r\n\r\n(1)\r\n\r\nFor dynamic spanner,
    the only known o(n) worst-case bounds were O(n3/4) high-probability worst-case
    update time for maintaining a 3-spanner and O(n5/9) for maintaining a 5-spanner.
    We give a O(1)k log3 (n) high-probability worst-case time bound for maintaining
    a (2k-1)-spanner, which yields the first worst-case polylog update time for all
    constant k. (All the results above maintain the optimal tradeoff of stretch 2k-1
    and Õ(n1+1/k) edges.)\r\n\r\n(2)\r\n\r\nFor dynamic maximal matching, or dynamic
    2-approximate maximum matching, no algorithm with o(n) worst-case time bound was
    known and we present an algorithm with O(log 5 (n)) high-probability worst-case
    time; similar worst-case bounds existed only for maintaining a matching that was
    (2+ϵ)-approximate, and hence not maximal.\r\n\r\nOur results are achieved using
    a new approach for converting amortized guarantees to worst-case ones for randomized
    data structures by going through a third type of guarantee, which is a middle
    ground between the two above: An algorithm is said to have worst-case expected
    update time ɑ if for every update σ, the expected time to process σ is at most
    ɑ. Although stronger than amortized expected, the worst-case expected guarantee
    does not resolve the fundamental problem of amortization: A worst-case expected
    update time of O(1) still allows for the possibility that every 1/f(n) updates
    requires ϴ (f(n)) time to process, for arbitrarily high f(n). In this article,
    we present a black-box reduction that converts any data structure with worst-case
    expected update time into one with a high-probability worst-case update time:
    The query time remains the same, while the update time increases by a factor of
    O(log 2(n)).\r\n\r\nThus, we achieve our results in two steps:\r\n\r\n(1) First,
    we show how to convert existing dynamic graph algorithms with amortized expected
    polylogarithmic running times into algorithms with worst-case expected polylogarithmic
    running times.\r\n\r\n(2) Then, we use our black-box reduction to achieve the
    polylogarithmic high-probability worst-case time bound. All our algorithms are
    Las-Vegas-type algorithms."
acknowledgement: 'The conference version of this article [10] had an error in the
  analysis of the dynamic matching algorithm. In particular, Lemma 4.5 assumed an
  independence between adversarial updates to the hierarchy that is in fact true,
  but which requires a sophisticated proof. We are very grateful to the anonymous
  reviewers of Transactions on Algorithms for pointing out this mistake in our analysis.
  The mistake is fixed in Section 4.5. Almost the entire fix is a matter of analysis:
  the only change to the algorithm itself is the introduction of responsible bits
  in Algorithm 2. The first author would like to thank Mikkel Thorup and Alan Roytman
  for a very helpful discussion of the proof of Theorem 1.1.'
article_number: '29'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Aaron
  full_name: Bernstein, Aaron
  last_name: Bernstein
- first_name: Sebastian
  full_name: Forster, Sebastian
  last_name: Forster
- first_name: Monika H
  full_name: Henzinger, Monika H
  id: 540c9bbd-f2de-11ec-812d-d04a5be85630
  last_name: Henzinger
  orcid: 0000-0002-5008-6530
citation:
  ama: Bernstein A, Forster S, Henzinger MH. A deamortization approach for dynamic
    spanner and dynamic maximal matching. <i>ACM Transactions on Algorithms</i>. 2021;17(4).
    doi:<a href="https://doi.org/10.1145/3469833">10.1145/3469833</a>
  apa: Bernstein, A., Forster, S., &#38; Henzinger, M. H. (2021). A deamortization
    approach for dynamic spanner and dynamic maximal matching. <i>ACM Transactions
    on Algorithms</i>. Association for Computing Machinery. <a href="https://doi.org/10.1145/3469833">https://doi.org/10.1145/3469833</a>
  chicago: Bernstein, Aaron, Sebastian Forster, and Monika H Henzinger. “A Deamortization
    Approach for Dynamic Spanner and Dynamic Maximal Matching.” <i>ACM Transactions
    on Algorithms</i>. Association for Computing Machinery, 2021. <a href="https://doi.org/10.1145/3469833">https://doi.org/10.1145/3469833</a>.
  ieee: A. Bernstein, S. Forster, and M. H. Henzinger, “A deamortization approach
    for dynamic spanner and dynamic maximal matching,” <i>ACM Transactions on Algorithms</i>,
    vol. 17, no. 4. Association for Computing Machinery, 2021.
  ista: Bernstein A, Forster S, Henzinger MH. 2021. A deamortization approach for
    dynamic spanner and dynamic maximal matching. ACM Transactions on Algorithms.
    17(4), 29.
  mla: Bernstein, Aaron, et al. “A Deamortization Approach for Dynamic Spanner and
    Dynamic Maximal Matching.” <i>ACM Transactions on Algorithms</i>, vol. 17, no.
    4, 29, Association for Computing Machinery, 2021, doi:<a href="https://doi.org/10.1145/3469833">10.1145/3469833</a>.
  short: A. Bernstein, S. Forster, M.H. Henzinger, ACM Transactions on Algorithms
    17 (2021).
date_created: 2022-07-27T11:09:06Z
date_published: 2021-10-04T00:00:00Z
date_updated: 2022-09-09T11:35:44Z
day: '04'
doi: 10.1145/3469833
extern: '1'
external_id:
  arxiv:
  - '1810.10932'
intvolume: '        17'
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1810.10932
month: '10'
oa: 1
oa_version: Preprint
publication: ACM Transactions on Algorithms
publication_identifier:
  eissn:
  - 1549-6333
  issn:
  - 1549-6325
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
scopus_import: '1'
status: public
title: A deamortization approach for dynamic spanner and dynamic maximal matching
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 17
year: '2021'
...
---
_id: '11756'
abstract:
- lang: eng
  text: We give two fully dynamic algorithms that maintain a (1 + ε)-approximation
    of the weight M of a minimum spanning forest (MSF) of an n-node graph G with edges
    weights in [1, W ], for any ε > 0. (1) Our deterministic algorithm takes O (W
    2 log W /ε3) worst-case update time, which is O (1) if both W and ε are constants.
    (2) Our randomized (Monte-Carlo style) algorithm works with high probability and
    runs in worst-case O (log W /ε4) update time if W = O ((m∗)1/6/log2/3 n), where
    m∗ is the minimum number of edges in the graph throughout all the updates. It
    works even against an adaptive adversary. We complement our algorithmic results
    with two cell-probe lower bounds for dynamically maintaining an approximation
    of the weight of an MSF of a graph.
article_number: '104805'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Monika H
  full_name: Henzinger, Monika H
  id: 540c9bbd-f2de-11ec-812d-d04a5be85630
  last_name: Henzinger
  orcid: 0000-0002-5008-6530
- first_name: Pan
  full_name: Peng, Pan
  last_name: Peng
citation:
  ama: Henzinger MH, Peng P. Constant-time dynamic weight approximation for minimum
    spanning forest. <i>Information and Computation</i>. 2021;281(12). doi:<a href="https://doi.org/10.1016/j.ic.2021.104805">10.1016/j.ic.2021.104805</a>
  apa: Henzinger, M. H., &#38; Peng, P. (2021). Constant-time dynamic weight approximation
    for minimum spanning forest. <i>Information and Computation</i>. Elsevier. <a
    href="https://doi.org/10.1016/j.ic.2021.104805">https://doi.org/10.1016/j.ic.2021.104805</a>
  chicago: Henzinger, Monika H, and Pan Peng. “Constant-Time Dynamic Weight Approximation
    for Minimum Spanning Forest.” <i>Information and Computation</i>. Elsevier, 2021.
    <a href="https://doi.org/10.1016/j.ic.2021.104805">https://doi.org/10.1016/j.ic.2021.104805</a>.
  ieee: M. H. Henzinger and P. Peng, “Constant-time dynamic weight approximation for
    minimum spanning forest,” <i>Information and Computation</i>, vol. 281, no. 12.
    Elsevier, 2021.
  ista: Henzinger MH, Peng P. 2021. Constant-time dynamic weight approximation for
    minimum spanning forest. Information and Computation. 281(12), 104805.
  mla: Henzinger, Monika H., and Pan Peng. “Constant-Time Dynamic Weight Approximation
    for Minimum Spanning Forest.” <i>Information and Computation</i>, vol. 281, no.
    12, 104805, Elsevier, 2021, doi:<a href="https://doi.org/10.1016/j.ic.2021.104805">10.1016/j.ic.2021.104805</a>.
  short: M.H. Henzinger, P. Peng, Information and Computation 281 (2021).
date_created: 2022-08-08T10:58:29Z
date_published: 2021-12-01T00:00:00Z
date_updated: 2022-09-12T09:29:29Z
day: '01'
doi: 10.1016/j.ic.2021.104805
extern: '1'
external_id:
  arxiv:
  - '2011.00977'
intvolume: '       281'
issue: '12'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2011.00977
month: '12'
oa: 1
oa_version: Preprint
publication: Information and Computation
publication_identifier:
  issn:
  - 0890-5401
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Constant-time dynamic weight approximation for minimum spanning forest
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 281
year: '2021'
...
---
_id: '11771'
abstract:
- lang: eng
  text: "Classic dynamic data structure problems maintain a data structure subject
    to a sequence S of updates and they answer queries using the latest version of
    the data structure, i.e., the data structure after processing the whole sequence.
    To handle operations that change the sequence S of updates, Demaine et al. [7]
    introduced retroactive data structures (RDS). A retroactive operation modifies
    the update sequence S in a given position t, called time, and either creates or
    cancels an update in S at time t. A fully retroactive data structure supports
    queries at any time t: a query at time t is answered using only the updates of
    S up to time t. While efficient RDS have been proposed for classic data structures,
    e.g., stack, priority queue and binary search tree, the retroactive version of
    graph problems are rarely studied.\r\n\r\nIn this paper we study retroactive graph
    problems including connectivity, minimum spanning forest (MSF), maximum degree,
    etc. We show that under the OMv conjecture (proposed by Henzinger et al. [15]),
    there does not exist fully RDS maintaining connectivity or MSF, or incremental
    fully RDS maintaining the maximum degree with \U0001D442(\U0001D45B1−\U0001D716)
    time per operation, for any constant \U0001D716>0. Furthermore, We provide RDS
    with almost tight time per operation. We give fully RDS for maintaining the maximum
    degree, connectivity and MSF in \U0001D442̃ (\U0001D45B) time per operation. We
    also give an algorithm for the incremental (insertion-only) fully retroactive
    connectivity with \U0001D442̃ (1) time per operation, showing that the lower bound
    cannot be extended to this setting.\r\n\r\nWe also study a restricted version
    of RDS, where the only change to S is the swap of neighboring updates and show
    that for this problem we can beat the above hardness result. This also implies
    the first non-trivial dynamic Reeb graph computation algorithm."
alternative_title:
- LNCS
article_processing_charge: No
arxiv: 1
author:
- first_name: Monika H
  full_name: Henzinger, Monika H
  id: 540c9bbd-f2de-11ec-812d-d04a5be85630
  last_name: Henzinger
  orcid: 0000-0002-5008-6530
- first_name: Xiaowei
  full_name: Wu, Xiaowei
  last_name: Wu
citation:
  ama: 'Henzinger MH, Wu X. Upper and lower bounds for fully retroactive graph problems.
    In: <i>17th International Symposium on Algorithms and Data Structures</i>. Vol
    12808. Springer Nature; 2021:471–484. doi:<a href="https://doi.org/10.1007/978-3-030-83508-8_34">10.1007/978-3-030-83508-8_34</a>'
  apa: 'Henzinger, M. H., &#38; Wu, X. (2021). Upper and lower bounds for fully retroactive
    graph problems. In <i>17th International Symposium on Algorithms and Data Structures</i>
    (Vol. 12808, pp. 471–484). Virtual: Springer Nature. <a href="https://doi.org/10.1007/978-3-030-83508-8_34">https://doi.org/10.1007/978-3-030-83508-8_34</a>'
  chicago: Henzinger, Monika H, and Xiaowei Wu. “Upper and Lower Bounds for Fully
    Retroactive Graph Problems.” In <i>17th International Symposium on Algorithms
    and Data Structures</i>, 12808:471–484. Springer Nature, 2021. <a href="https://doi.org/10.1007/978-3-030-83508-8_34">https://doi.org/10.1007/978-3-030-83508-8_34</a>.
  ieee: M. H. Henzinger and X. Wu, “Upper and lower bounds for fully retroactive graph
    problems,” in <i>17th International Symposium on Algorithms and Data Structures</i>,
    Virtual, 2021, vol. 12808, pp. 471–484.
  ista: 'Henzinger MH, Wu X. 2021. Upper and lower bounds for fully retroactive graph
    problems. 17th International Symposium on Algorithms and Data Structures. WADS:
    Workshop on Algorithms and Data Structures, LNCS, vol. 12808, 471–484.'
  mla: Henzinger, Monika H., and Xiaowei Wu. “Upper and Lower Bounds for Fully Retroactive
    Graph Problems.” <i>17th International Symposium on Algorithms and Data Structures</i>,
    vol. 12808, Springer Nature, 2021, pp. 471–484, doi:<a href="https://doi.org/10.1007/978-3-030-83508-8_34">10.1007/978-3-030-83508-8_34</a>.
  short: M.H. Henzinger, X. Wu, in:, 17th International Symposium on Algorithms and
    Data Structures, Springer Nature, 2021, pp. 471–484.
conference:
  end_date: 2021-08-11
  location: Virtual
  name: 'WADS: Workshop on Algorithms and Data Structures'
  start_date: 2021-08-09
date_created: 2022-08-08T13:01:29Z
date_published: 2021-08-09T00:00:00Z
date_updated: 2023-02-10T08:31:50Z
day: '09'
doi: 10.1007/978-3-030-83508-8_34
extern: '1'
external_id:
  arxiv:
  - '1910.03332'
intvolume: '     12808'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1910.03332
month: '08'
oa: 1
oa_version: Preprint
page: 471–484
publication: 17th International Symposium on Algorithms and Data Structures
publication_identifier:
  eisbn:
  - '9783030835088'
  eissn:
  - 1611-3349
  isbn:
  - '9783030835071'
  issn:
  - 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Upper and lower bounds for fully retroactive graph problems
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 12808
year: '2021'
...
---
_id: '7883'
abstract:
- lang: eng
  text: All vertebrates have a spinal cord with dimensions and shape specific to their
    species. Yet how species‐specific organ size and shape are achieved is a fundamental
    unresolved question in biology. The formation and sculpting of organs begins during
    embryonic development. As it develops, the spinal cord extends in anterior–posterior
    direction in synchrony with the overall growth of the body. The dorsoventral (DV)
    and apicobasal lengths of the spinal cord neuroepithelium also change, while at
    the same time a characteristic pattern of neural progenitor subtypes along the
    DV axis is established and elaborated. At the basis of these changes in tissue
    size and shape are biophysical determinants, such as the change in cell number,
    cell size and shape, and anisotropic tissue growth. These processes are controlled
    by global tissue‐scale regulators, such as morphogen signaling gradients as well
    as mechanical forces. Current challenges in the field are to uncover how these
    tissue‐scale regulatory mechanisms are translated to the cellular and molecular
    level, and how regulation of distinct cellular processes gives rise to an overall
    defined size. Addressing these questions will help not only to achieve a better
    understanding of how size is controlled, but also of how tissue size is coordinated
    with the specification of pattern.
acknowledgement: 'Austrian Academy of Sciences, Grant/Award Number: DOC fellowship
  for Katarzyna Kuzmicz-Kowalska; Austrian Science Fund, Grant/Award Number: F78 (Stem
  Cell Modulation); H2020 European Research Council, Grant/Award Number: 680037'
article_number: e383
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Katarzyna
  full_name: Kuzmicz-Kowalska, Katarzyna
  id: 4CED352A-F248-11E8-B48F-1D18A9856A87
  last_name: Kuzmicz-Kowalska
- first_name: Anna
  full_name: Kicheva, Anna
  id: 3959A2A0-F248-11E8-B48F-1D18A9856A87
  last_name: Kicheva
  orcid: 0000-0003-4509-4998
citation:
  ama: 'Kuzmicz-Kowalska K, Kicheva A. Regulation of size and scale in vertebrate
    spinal cord development. <i>Wiley Interdisciplinary Reviews: Developmental Biology</i>.
    2021. doi:<a href="https://doi.org/10.1002/wdev.383">10.1002/wdev.383</a>'
  apa: 'Kuzmicz-Kowalska, K., &#38; Kicheva, A. (2021). Regulation of size and scale
    in vertebrate spinal cord development. <i>Wiley Interdisciplinary Reviews: Developmental
    Biology</i>. Wiley. <a href="https://doi.org/10.1002/wdev.383">https://doi.org/10.1002/wdev.383</a>'
  chicago: 'Kuzmicz-Kowalska, Katarzyna, and Anna Kicheva. “Regulation of Size and
    Scale in Vertebrate Spinal Cord Development.” <i>Wiley Interdisciplinary Reviews:
    Developmental Biology</i>. Wiley, 2021. <a href="https://doi.org/10.1002/wdev.383">https://doi.org/10.1002/wdev.383</a>.'
  ieee: 'K. Kuzmicz-Kowalska and A. Kicheva, “Regulation of size and scale in vertebrate
    spinal cord development,” <i>Wiley Interdisciplinary Reviews: Developmental Biology</i>.
    Wiley, 2021.'
  ista: 'Kuzmicz-Kowalska K, Kicheva A. 2021. Regulation of size and scale in vertebrate
    spinal cord development. Wiley Interdisciplinary Reviews: Developmental Biology.,
    e383.'
  mla: 'Kuzmicz-Kowalska, Katarzyna, and Anna Kicheva. “Regulation of Size and Scale
    in Vertebrate Spinal Cord Development.” <i>Wiley Interdisciplinary Reviews: Developmental
    Biology</i>, e383, Wiley, 2021, doi:<a href="https://doi.org/10.1002/wdev.383">10.1002/wdev.383</a>.'
  short: 'K. Kuzmicz-Kowalska, A. Kicheva, Wiley Interdisciplinary Reviews: Developmental
    Biology (2021).'
date_created: 2020-05-24T22:01:00Z
date_published: 2021-04-15T00:00:00Z
date_updated: 2024-03-07T15:03:00Z
day: '15'
ddc:
- '570'
department:
- _id: AnKi
doi: 10.1002/wdev.383
ec_funded: 1
external_id:
  isi:
  - '000531419400001'
  pmid:
  - '32391980'
file:
- access_level: open_access
  checksum: f0a7745d48afa09ea7025e876a0145a8
  content_type: application/pdf
  creator: dernst
  date_created: 2020-11-24T13:11:39Z
  date_updated: 2020-11-24T13:11:39Z
  file_id: '8800'
  file_name: 2020_WIREs_DevBio_KuzmiczKowalska.pdf
  file_size: 2527276
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  name: Coordination of Patterning And Growth In the Spinal Cord
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status: public
title: Regulation of size and scale in vertebrate spinal cord development
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type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
year: '2021'
...
---
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abstract:
- lang: eng
  text: Hartree–Fock theory has been justified as a mean-field approximation for fermionic
    systems. However, it suffers from some defects in predicting physical properties,
    making necessary a theory of quantum correlations. Recently, bosonization of many-body
    correlations has been rigorously justified as an upper bound on the correlation
    energy at high density with weak interactions. We review the bosonic approximation,
    deriving an effective Hamiltonian. We then show that for systems with Coulomb
    interaction this effective theory predicts collective excitations (plasmons) in
    accordance with the random phase approximation of Bohm and Pines, and with experimental
    observation.
article_number: '2060009'
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author:
- first_name: Niels P
  full_name: Benedikter, Niels P
  id: 3DE6C32A-F248-11E8-B48F-1D18A9856A87
  last_name: Benedikter
  orcid: 0000-0002-1071-6091
citation:
  ama: Benedikter NP. Bosonic collective excitations in Fermi gases. <i>Reviews in
    Mathematical Physics</i>. 2021;33(1). doi:<a href="https://doi.org/10.1142/s0129055x20600090">10.1142/s0129055x20600090</a>
  apa: Benedikter, N. P. (2021). Bosonic collective excitations in Fermi gases. <i>Reviews
    in Mathematical Physics</i>. World Scientific. <a href="https://doi.org/10.1142/s0129055x20600090">https://doi.org/10.1142/s0129055x20600090</a>
  chicago: Benedikter, Niels P. “Bosonic Collective Excitations in Fermi Gases.” <i>Reviews
    in Mathematical Physics</i>. World Scientific, 2021. <a href="https://doi.org/10.1142/s0129055x20600090">https://doi.org/10.1142/s0129055x20600090</a>.
  ieee: N. P. Benedikter, “Bosonic collective excitations in Fermi gases,” <i>Reviews
    in Mathematical Physics</i>, vol. 33, no. 1. World Scientific, 2021.
  ista: Benedikter NP. 2021. Bosonic collective excitations in Fermi gases. Reviews
    in Mathematical Physics. 33(1), 2060009.
  mla: Benedikter, Niels P. “Bosonic Collective Excitations in Fermi Gases.” <i>Reviews
    in Mathematical Physics</i>, vol. 33, no. 1, 2060009, World Scientific, 2021,
    doi:<a href="https://doi.org/10.1142/s0129055x20600090">10.1142/s0129055x20600090</a>.
  short: N.P. Benedikter, Reviews in Mathematical Physics 33 (2021).
date_created: 2020-05-28T16:47:55Z
date_published: 2021-01-01T00:00:00Z
date_updated: 2023-09-05T16:07:40Z
day: '01'
department:
- _id: RoSe
doi: 10.1142/s0129055x20600090
ec_funded: 1
external_id:
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  - '1910.08190'
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  - '000613313200010'
intvolume: '        33'
isi: 1
issue: '1'
language:
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  url: https://arxiv.org/abs/1910.08190
month: '01'
oa: 1
oa_version: Preprint
project:
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  call_identifier: H2020
  grant_number: '694227'
  name: Analysis of quantum many-body systems
publication: Reviews in Mathematical Physics
publication_identifier:
  eissn:
  - 1793-6659
  issn:
  - 0129-055X
publication_status: published
publisher: World Scientific
quality_controlled: '1'
scopus_import: '1'
status: public
title: Bosonic collective excitations in Fermi gases
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 33
year: '2021'
...
---
_id: '7901'
abstract:
- lang: eng
  text: We derive rigorously the leading order of the correlation energy of a Fermi
    gas in a scaling regime of high density and weak interaction. The result verifies
    the prediction of the random-phase approximation. Our proof refines the method
    of collective bosonization in three dimensions. We approximately diagonalize an
    effective Hamiltonian describing approximately bosonic collective excitations
    around the Hartree–Fock state, while showing that gapless and non-collective excitations
    have only a negligible effect on the ground state energy.
acknowledgement: We thank Christian Hainzl for helpful discussions and a referee for
  very careful reading of the paper and many helpful suggestions. NB and RS were supported
  by the European Research Council (ERC) under the European Union’s Horizon 2020 research
  and innovation programme (grant agreement No. 694227). Part of the research of NB
  was conducted on the RZD18 Nice–Milan–Vienna–Moscow. NB thanks Elliott H. Lieb and
  Peter Otte for explanations about the Luttinger model. PTN has received funding
  from the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under
  Germany’s Excellence Strategy (EXC-2111-390814868). MP acknowledges financial support
  from the European Research Council (ERC) under the European Union’s Horizon 2020
  research and innovation programme (ERC StG MaMBoQ, grant agreement No. 802901).
  BS gratefully acknowledges financial support from the NCCR SwissMAP, from the Swiss
  National Science Foundation through the Grant “Dynamical and energetic properties
  of Bose-Einstein condensates” and from the European Research Council through the
  ERC-AdG CLaQS (grant agreement No. 834782). All authors acknowledge support for
  workshop participation from Mathematisches Forschungsinstitut Oberwolfach (Leibniz
  Association). NB, PTN, BS, and RS acknowledge support for workshop participation
  from Fondation des Treilles.
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Niels P
  full_name: Benedikter, Niels P
  id: 3DE6C32A-F248-11E8-B48F-1D18A9856A87
  last_name: Benedikter
  orcid: 0000-0002-1071-6091
- first_name: Phan Thành
  full_name: Nam, Phan Thành
  last_name: Nam
- first_name: Marcello
  full_name: Porta, Marcello
  last_name: Porta
- first_name: Benjamin
  full_name: Schlein, Benjamin
  last_name: Schlein
- first_name: Robert
  full_name: Seiringer, Robert
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
citation:
  ama: Benedikter NP, Nam PT, Porta M, Schlein B, Seiringer R. Correlation energy
    of a weakly interacting Fermi gas. <i>Inventiones Mathematicae</i>. 2021;225:885-979.
    doi:<a href="https://doi.org/10.1007/s00222-021-01041-5">10.1007/s00222-021-01041-5</a>
  apa: Benedikter, N. P., Nam, P. T., Porta, M., Schlein, B., &#38; Seiringer, R.
    (2021). Correlation energy of a weakly interacting Fermi gas. <i>Inventiones Mathematicae</i>.
    Springer. <a href="https://doi.org/10.1007/s00222-021-01041-5">https://doi.org/10.1007/s00222-021-01041-5</a>
  chicago: Benedikter, Niels P, Phan Thành Nam, Marcello Porta, Benjamin Schlein,
    and Robert Seiringer. “Correlation Energy of a Weakly Interacting Fermi Gas.”
    <i>Inventiones Mathematicae</i>. Springer, 2021. <a href="https://doi.org/10.1007/s00222-021-01041-5">https://doi.org/10.1007/s00222-021-01041-5</a>.
  ieee: N. P. Benedikter, P. T. Nam, M. Porta, B. Schlein, and R. Seiringer, “Correlation
    energy of a weakly interacting Fermi gas,” <i>Inventiones Mathematicae</i>, vol.
    225. Springer, pp. 885–979, 2021.
  ista: Benedikter NP, Nam PT, Porta M, Schlein B, Seiringer R. 2021. Correlation
    energy of a weakly interacting Fermi gas. Inventiones Mathematicae. 225, 885–979.
  mla: Benedikter, Niels P., et al. “Correlation Energy of a Weakly Interacting Fermi
    Gas.” <i>Inventiones Mathematicae</i>, vol. 225, Springer, 2021, pp. 885–979,
    doi:<a href="https://doi.org/10.1007/s00222-021-01041-5">10.1007/s00222-021-01041-5</a>.
  short: N.P. Benedikter, P.T. Nam, M. Porta, B. Schlein, R. Seiringer, Inventiones
    Mathematicae 225 (2021) 885–979.
date_created: 2020-05-28T16:48:20Z
date_published: 2021-05-03T00:00:00Z
date_updated: 2023-08-21T06:30:30Z
day: '03'
ddc:
- '510'
department:
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doi: 10.1007/s00222-021-01041-5
ec_funded: 1
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title: Correlation energy of a weakly interacting Fermi gas
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