[{"type":"journal_article","month":"04","year":"2009","volume":181,"citation":{"ista":"Vicoso B, Charlesworth B. 2009. Recombination rates may affect the ratio of X to autosomal noncoding polymorphism in African populations of Drosophila melanogaster. Genetics. 181(4), 1699–1701.","chicago":"Vicoso, Beatriz, and Brian Charlesworth. “Recombination Rates May Affect the Ratio of X to Autosomal Noncoding Polymorphism in African Populations of Drosophila Melanogaster.” <i>Genetics</i>. Genetics Society of America, 2009. <a href=\"https://doi.org/10.1534/genetics.108.098004\">https://doi.org/10.1534/genetics.108.098004</a>.","ama":"Vicoso B, Charlesworth B. Recombination rates may affect the ratio of X to autosomal noncoding polymorphism in African populations of Drosophila melanogaster. <i>Genetics</i>. 2009;181(4):1699-1701. doi:<a href=\"https://doi.org/10.1534/genetics.108.098004\">10.1534/genetics.108.098004</a>","apa":"Vicoso, B., &#38; Charlesworth, B. (2009). Recombination rates may affect the ratio of X to autosomal noncoding polymorphism in African populations of Drosophila melanogaster. <i>Genetics</i>. Genetics Society of America. <a href=\"https://doi.org/10.1534/genetics.108.098004\">https://doi.org/10.1534/genetics.108.098004</a>","short":"B. Vicoso, B. Charlesworth, Genetics 181 (2009) 1699–1701.","mla":"Vicoso, Beatriz, and Brian Charlesworth. “Recombination Rates May Affect the Ratio of X to Autosomal Noncoding Polymorphism in African Populations of Drosophila Melanogaster.” <i>Genetics</i>, vol. 181, no. 4, Genetics Society of America, 2009, pp. 1699–701, doi:<a href=\"https://doi.org/10.1534/genetics.108.098004\">10.1534/genetics.108.098004</a>.","ieee":"B. Vicoso and B. Charlesworth, “Recombination rates may affect the ratio of X to autosomal noncoding polymorphism in African populations of Drosophila melanogaster,” <i>Genetics</i>, vol. 181, no. 4. Genetics Society of America, pp. 1699–1701, 2009."},"date_published":"2009-04-01T00:00:00Z","date_created":"2018-12-11T11:55:31Z","issue":"4","status":"public","date_updated":"2021-01-12T06:55:06Z","title":"Recombination rates may affect the ratio of X to autosomal noncoding polymorphism in African populations of Drosophila melanogaster","publication":"Genetics","page":"1699 - 1701","day":"01","acknowledgement":"This work was funded by a Portuguese Foundation for Science and Technology scholarship to B.V., and B.C. was supported by the Royal Society","quality_controlled":0,"_id":"2067","intvolume":"       181","extern":1,"author":[{"orcid":"0000-0002-4579-8306","full_name":"Beatriz Vicoso","id":"49E1C5C6-F248-11E8-B48F-1D18A9856A87","first_name":"Beatriz","last_name":"Vicoso"},{"full_name":"Charlesworth, Brian","first_name":"Brian","last_name":"Charlesworth"}],"publication_status":"published","publisher":"Genetics Society of America","doi":"10.1534/genetics.108.098004","publist_id":"4971"},{"date_updated":"2021-01-12T06:55:06Z","status":"public","issue":"5","date_created":"2018-12-11T11:55:31Z","date_published":"2009-05-01T00:00:00Z","abstract":[{"lang":"eng","text":"In Drosophila, there is a consistent deficit of male-biased genes on the X chromosome. It has been suggested that male-biased genes may evolve from initially unbiased genes as a result of increased expression levels in males. If transcription rates are limited, a large increase in expression in the testis may be harder to achieve for single-copy X-linked genes than for autosomal genes, because they are already hypertranscribed due to dosage compensation. This hypothesis predicts that the larger the increase in expression required to make a male-biased gene, the lower the chance of this being achievable if it is located on the X chromosome. Consequently, highly expressed male-biased genes should be located on the X chromosome less often than lowly expressed male-biased genes. This pattern is observed in our analysis of publicly available data, where microarray data or EST data are used to detect male-biased genes in D. melanogaster and to measure their expression levels. This is consistent with the idea that limitations in transcription rates may prevent male-biased genes from accumulating on the X chromosome."}],"day":"01","page":"576 - 583","title":"The deficit of male-biased genes on the D. melanogaster X chromosome is expression-dependent: A consequence of dosage compensation?","publication":"Journal of Molecular Evolution","volume":68,"year":"2009","month":"05","type":"journal_article","citation":{"ieee":"B. Vicoso and B. Charlesworth, “The deficit of male-biased genes on the D. melanogaster X chromosome is expression-dependent: A consequence of dosage compensation?,” <i>Journal of Molecular Evolution</i>, vol. 68, no. 5. Springer, pp. 576–583, 2009.","mla":"Vicoso, Beatriz, and Brian Charlesworth. “The Deficit of Male-Biased Genes on the D. Melanogaster X Chromosome Is Expression-Dependent: A Consequence of Dosage Compensation?” <i>Journal of Molecular Evolution</i>, vol. 68, no. 5, Springer, 2009, pp. 576–83, doi:<a href=\"https://doi.org/10.1007/s00239-009-9235-4\">10.1007/s00239-009-9235-4</a>.","short":"B. Vicoso, B. Charlesworth, Journal of Molecular Evolution 68 (2009) 576–583.","apa":"Vicoso, B., &#38; Charlesworth, B. (2009). The deficit of male-biased genes on the D. melanogaster X chromosome is expression-dependent: A consequence of dosage compensation? <i>Journal of Molecular Evolution</i>. Springer. <a href=\"https://doi.org/10.1007/s00239-009-9235-4\">https://doi.org/10.1007/s00239-009-9235-4</a>","ama":"Vicoso B, Charlesworth B. The deficit of male-biased genes on the D. melanogaster X chromosome is expression-dependent: A consequence of dosage compensation? <i>Journal of Molecular Evolution</i>. 2009;68(5):576-583. doi:<a href=\"https://doi.org/10.1007/s00239-009-9235-4\">10.1007/s00239-009-9235-4</a>","chicago":"Vicoso, Beatriz, and Brian Charlesworth. “The Deficit of Male-Biased Genes on the D. Melanogaster X Chromosome Is Expression-Dependent: A Consequence of Dosage Compensation?” <i>Journal of Molecular Evolution</i>. Springer, 2009. <a href=\"https://doi.org/10.1007/s00239-009-9235-4\">https://doi.org/10.1007/s00239-009-9235-4</a>.","ista":"Vicoso B, Charlesworth B. 2009. The deficit of male-biased genes on the D. melanogaster X chromosome is expression-dependent: A consequence of dosage compensation? Journal of Molecular Evolution. 68(5), 576–583."},"author":[{"full_name":"Beatriz Vicoso","orcid":"0000-0002-4579-8306","id":"49E1C5C6-F248-11E8-B48F-1D18A9856A87","first_name":"Beatriz","last_name":"Vicoso"},{"full_name":"Charlesworth, Brian","first_name":"Brian","last_name":"Charlesworth"}],"publication_status":"published","publist_id":"4970","doi":"10.1007/s00239-009-9235-4","publisher":"Springer","extern":1,"intvolume":"        68","_id":"2068","quality_controlled":0,"acknowledgement":"This work was funded by a Portuguese Foundation for Science and Technology scholarship to B.V., and B.C. was supported by the Royal Society"},{"type":"journal_article","month":"09","year":"2009","volume":63,"citation":{"mla":"Vicoso, Beatriz, and Brian Charlesworth. “Effective Population Size and the Faster-X Effect: An Extended Model.” <i>Evolution</i>, vol. 63, no. 9, Wiley-Blackwell, 2009, pp. 2413–26, doi:<a href=\"https://doi.org/10.1111/j.1558-5646.2009.00719.x\">10.1111/j.1558-5646.2009.00719.x</a>.","ieee":"B. Vicoso and B. Charlesworth, “Effective population size and the faster-X effect: An extended model,” <i>Evolution</i>, vol. 63, no. 9. Wiley-Blackwell, pp. 2413–2426, 2009.","short":"B. Vicoso, B. Charlesworth, Evolution 63 (2009) 2413–2426.","apa":"Vicoso, B., &#38; Charlesworth, B. (2009). Effective population size and the faster-X effect: An extended model. <i>Evolution</i>. Wiley-Blackwell. <a href=\"https://doi.org/10.1111/j.1558-5646.2009.00719.x\">https://doi.org/10.1111/j.1558-5646.2009.00719.x</a>","ama":"Vicoso B, Charlesworth B. Effective population size and the faster-X effect: An extended model. <i>Evolution</i>. 2009;63(9):2413-2426. doi:<a href=\"https://doi.org/10.1111/j.1558-5646.2009.00719.x\">10.1111/j.1558-5646.2009.00719.x</a>","chicago":"Vicoso, Beatriz, and Brian Charlesworth. “Effective Population Size and the Faster-X Effect: An Extended Model.” <i>Evolution</i>. Wiley-Blackwell, 2009. <a href=\"https://doi.org/10.1111/j.1558-5646.2009.00719.x\">https://doi.org/10.1111/j.1558-5646.2009.00719.x</a>.","ista":"Vicoso B, Charlesworth B. 2009. Effective population size and the faster-X effect: An extended model. Evolution. 63(9), 2413–2426."},"date_published":"2009-09-01T00:00:00Z","issue":"9","date_created":"2018-12-11T11:55:32Z","date_updated":"2021-01-12T06:55:06Z","status":"public","title":"Effective population size and the faster-X effect: An extended model","publication":"Evolution","page":"2413 - 2426","day":"01","abstract":[{"lang":"eng","text":"Current models of X-linked and autosomal evolutionary rates often assume that the effective population size of the X chromosome (NeX) is equal to three-quarters of the autosomal population size (NeA). However, polymorphism studies of Drosophila melanogaster and D. simulans suggest that there are often significant deviations from this value. We have computed fixation rates of beneficial and deleterious mutations at X-linked and autosomal sites when this occurs. We find that NeX/NeA is a crucial parameter for the rates of evolution of X-linked sites compared to autosomal sites. Faster-X evolution due to the fixation of beneficial mutations can occur under a much wider range of levels of dominance when NeX/N eA &gt; 3/4. We also examined various parameters that are known to influence the rates of evolution at X-linked and autosomal sites, such as different mutation rates in males and females and mutations that are sexually antagonistic, to determine which cases can lead to faster-X evolution. We show that, when the rate of nonsynonymous evolution is normalized by the rate of neutral evolution, a sex difference in mutation rate has no influence on the conditions for faster-X evolution."}],"acknowledgement":"This work was funded by a Portuguese Foundation for Science and Technology scholarship to BV, and BC was supported by the Royal Society","_id":"2069","quality_controlled":0,"intvolume":"        63","extern":1,"publication_status":"published","author":[{"orcid":"0000-0002-4579-8306","full_name":"Beatriz Vicoso","id":"49E1C5C6-F248-11E8-B48F-1D18A9856A87","first_name":"Beatriz","last_name":"Vicoso"},{"first_name":"Brian","last_name":"Charlesworth","full_name":"Charlesworth, Brian"}],"publisher":"Wiley-Blackwell","doi":"10.1111/j.1558-5646.2009.00719.x","publist_id":"4968"},{"_id":"13414","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","extern":"1","pmid":1,"publisher":"Wiley","doi":"10.1002/smll.200900902","publication_status":"published","author":[{"first_name":"Kevin P.","last_name":"Browne","full_name":"Browne, Kevin P."},{"last_name":"Klajn","first_name":"Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","full_name":"Klajn, Rafal"},{"full_name":"Villa, JulieAnn","last_name":"Villa","first_name":"JulieAnn"},{"first_name":"Bartosz A.","last_name":"Grzybowski","full_name":"Grzybowski, Bartosz A."}],"citation":{"ista":"Browne KP, Klajn R, Villa J, Grzybowski BA. 2009. Mechanofabrication of pancake and rodlike nanostructures from deformable nanoparticle aggregates. Small. 5(23), 2656–2658.","chicago":"Browne, Kevin P., Rafal Klajn, JulieAnn Villa, and Bartosz A. Grzybowski. “Mechanofabrication of Pancake and Rodlike Nanostructures from Deformable Nanoparticle Aggregates.” <i>Small</i>. Wiley, 2009. <a href=\"https://doi.org/10.1002/smll.200900902\">https://doi.org/10.1002/smll.200900902</a>.","apa":"Browne, K. P., Klajn, R., Villa, J., &#38; Grzybowski, B. A. (2009). Mechanofabrication of pancake and rodlike nanostructures from deformable nanoparticle aggregates. <i>Small</i>. Wiley. <a href=\"https://doi.org/10.1002/smll.200900902\">https://doi.org/10.1002/smll.200900902</a>","ama":"Browne KP, Klajn R, Villa J, Grzybowski BA. Mechanofabrication of pancake and rodlike nanostructures from deformable nanoparticle aggregates. <i>Small</i>. 2009;5(23):2656-2658. doi:<a href=\"https://doi.org/10.1002/smll.200900902\">10.1002/smll.200900902</a>","ieee":"K. P. Browne, R. Klajn, J. Villa, and B. A. Grzybowski, “Mechanofabrication of pancake and rodlike nanostructures from deformable nanoparticle aggregates,” <i>Small</i>, vol. 5, no. 23. Wiley, pp. 2656–2658, 2009.","mla":"Browne, Kevin P., et al. “Mechanofabrication of Pancake and Rodlike Nanostructures from Deformable Nanoparticle Aggregates.” <i>Small</i>, vol. 5, no. 23, Wiley, 2009, pp. 2656–58, doi:<a href=\"https://doi.org/10.1002/smll.200900902\">10.1002/smll.200900902</a>.","short":"K.P. Browne, R. Klajn, J. Villa, B.A. Grzybowski, Small 5 (2009) 2656–2658."},"oa_version":"None","keyword":["Biomaterials","Biotechnology","General Materials Science","General Chemistry"],"publication_identifier":{"eissn":["1613-6829"],"issn":["1613-6810"]},"type":"journal_article","volume":5,"year":"2009","scopus_import":"1","title":"Mechanofabrication of pancake and rodlike nanostructures from deformable nanoparticle aggregates","abstract":[{"text":"Supraspherical aggregates of crosslinked metal nanoparticles are transformed into pancakes and nanorods by mechanical stresses and shears imparted by macroscopic objects (see image). The dimensions of both types of nanostructures can be controlled by the pressures applied.","lang":"eng"}],"issue":"23","date_published":"2009-12-01T00:00:00Z","date_updated":"2023-08-08T08:49:22Z","article_processing_charge":"No","quality_controlled":"1","intvolume":"         5","external_id":{"pmid":["19771567"]},"language":[{"iso":"eng"}],"article_type":"original","month":"12","page":"2656-2658","publication":"Small","day":"01","date_created":"2023-08-01T09:50:12Z","status":"public"},{"publication":"Nature Chemistry","page":"733-738","day":"01","date_created":"2023-08-01T09:50:23Z","status":"public","language":[{"iso":"eng"}],"month":"12","article_type":"original","external_id":{"pmid":["21124361"]},"quality_controlled":"1","article_processing_charge":"No","intvolume":"         1","title":"Dynamic hook-and-eye nanoparticle sponges","abstract":[{"lang":"eng","text":"Systems in which nanoscale components of different types can be captured and/or released from organic scaffolds provide a fertile basis for the construction of dynamic, exchangeable functional materials. In such heterogeneous systems, the components interact with one another by means of programmable, noncovalent bonding interactions. Herein, we describe polymers that capture and release functionalized nanoparticles selectively during redox-controlled aggregation and disaggregation, respectively. The interactions between the polymer and the NPs are mediated by the reversible formation of polypseudorotaxanes, and give rise to architectures ranging from short chains composed of few nanoparticles to extended networks of nanoparticles crosslinked by the polymer. In the latter case, the polymer/nanoparticle aggregates precipitate from solution such that the polymer acts as a selective ‘sponge’ for the capture/release of the nanoparticles of different types."}],"date_published":"2009-12-01T00:00:00Z","date_updated":"2023-08-08T08:55:36Z","keyword":["General Chemical Engineering","General Chemistry"],"oa_version":"None","citation":{"ista":"Klajn R, Olson MA, Wesson PJ, Fang L, Coskun A, Trabolsi A, Soh S, Stoddart JF, Grzybowski BA. 2009. Dynamic hook-and-eye nanoparticle sponges. Nature Chemistry. 1, 733–738.","chicago":"Klajn, Rafal, Mark A. Olson, Paul J. Wesson, Lei Fang, Ali Coskun, Ali Trabolsi, Siowling Soh, J. Fraser Stoddart, and Bartosz A. Grzybowski. “Dynamic Hook-and-Eye Nanoparticle Sponges.” <i>Nature Chemistry</i>. Springer Nature, 2009. <a href=\"https://doi.org/10.1038/nchem.432\">https://doi.org/10.1038/nchem.432</a>.","ama":"Klajn R, Olson MA, Wesson PJ, et al. Dynamic hook-and-eye nanoparticle sponges. <i>Nature Chemistry</i>. 2009;1:733-738. doi:<a href=\"https://doi.org/10.1038/nchem.432\">10.1038/nchem.432</a>","apa":"Klajn, R., Olson, M. A., Wesson, P. J., Fang, L., Coskun, A., Trabolsi, A., … Grzybowski, B. A. (2009). Dynamic hook-and-eye nanoparticle sponges. <i>Nature Chemistry</i>. Springer Nature. <a href=\"https://doi.org/10.1038/nchem.432\">https://doi.org/10.1038/nchem.432</a>","short":"R. Klajn, M.A. Olson, P.J. Wesson, L. Fang, A. Coskun, A. Trabolsi, S. Soh, J.F. Stoddart, B.A. Grzybowski, Nature Chemistry 1 (2009) 733–738.","ieee":"R. Klajn <i>et al.</i>, “Dynamic hook-and-eye nanoparticle sponges,” <i>Nature Chemistry</i>, vol. 1. Springer Nature, pp. 733–738, 2009.","mla":"Klajn, Rafal, et al. “Dynamic Hook-and-Eye Nanoparticle Sponges.” <i>Nature Chemistry</i>, vol. 1, Springer Nature, 2009, pp. 733–38, doi:<a href=\"https://doi.org/10.1038/nchem.432\">10.1038/nchem.432</a>."},"type":"journal_article","publication_identifier":{"issn":["1755-4330"],"eissn":["1755-4349"]},"scopus_import":"1","year":"2009","volume":1,"publisher":"Springer Nature","doi":"10.1038/nchem.432","author":[{"first_name":"Rafal","last_name":"Klajn","full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b"},{"full_name":"Olson, Mark A.","last_name":"Olson","first_name":"Mark A."},{"full_name":"Wesson, Paul J.","first_name":"Paul J.","last_name":"Wesson"},{"last_name":"Fang","first_name":"Lei","full_name":"Fang, Lei"},{"full_name":"Coskun, Ali","last_name":"Coskun","first_name":"Ali"},{"last_name":"Trabolsi","first_name":"Ali","full_name":"Trabolsi, Ali"},{"full_name":"Soh, Siowling","last_name":"Soh","first_name":"Siowling"},{"first_name":"J. Fraser","last_name":"Stoddart","full_name":"Stoddart, J. Fraser"},{"first_name":"Bartosz A.","last_name":"Grzybowski","full_name":"Grzybowski, Bartosz A."}],"publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"13415","extern":"1","pmid":1},{"intvolume":"         9","quality_controlled":"1","article_processing_charge":"No","external_id":{"pmid":["19694461"]},"language":[{"iso":"eng"}],"article_type":"original","month":"09","day":"09","page":"3185-3190","publication":"Nano Letters","status":"public","date_created":"2023-08-01T10:29:27Z","extern":"1","_id":"13416","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","pmid":1,"doi":"10.1021/nl901385c","publisher":"American Chemical Society","author":[{"full_name":"Olson, Mark A.","first_name":"Mark A.","last_name":"Olson"},{"first_name":"Ali","last_name":"Coskun","full_name":"Coskun, Ali"},{"first_name":"Rafal","last_name":"Klajn","full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b"},{"first_name":"Lei","last_name":"Fang","full_name":"Fang, Lei"},{"last_name":"Dey","first_name":"Sanjeev K.","full_name":"Dey, Sanjeev K."},{"first_name":"Kevin P.","last_name":"Browne","full_name":"Browne, Kevin P."},{"last_name":"Grzybowski","first_name":"Bartosz A.","full_name":"Grzybowski, Bartosz A."},{"full_name":"Stoddart, J. Fraser","last_name":"Stoddart","first_name":"J. Fraser"}],"publication_status":"published","keyword":["Mechanical Engineering","Condensed Matter Physics","General Materials Science","General Chemistry","Bioengineering"],"oa_version":"None","citation":{"ista":"Olson MA, Coskun A, Klajn R, Fang L, Dey SK, Browne KP, Grzybowski BA, Stoddart JF. 2009. Assembly of polygonal nanoparticle clusters directed by reversible noncovalent bonding interactions. Nano Letters. 9(9), 3185–3190.","chicago":"Olson, Mark A., Ali Coskun, Rafal Klajn, Lei Fang, Sanjeev K. Dey, Kevin P. Browne, Bartosz A. Grzybowski, and J. Fraser Stoddart. “Assembly of Polygonal Nanoparticle Clusters Directed by Reversible Noncovalent Bonding Interactions.” <i>Nano Letters</i>. American Chemical Society, 2009. <a href=\"https://doi.org/10.1021/nl901385c\">https://doi.org/10.1021/nl901385c</a>.","ama":"Olson MA, Coskun A, Klajn R, et al. Assembly of polygonal nanoparticle clusters directed by reversible noncovalent bonding interactions. <i>Nano Letters</i>. 2009;9(9):3185-3190. doi:<a href=\"https://doi.org/10.1021/nl901385c\">10.1021/nl901385c</a>","apa":"Olson, M. A., Coskun, A., Klajn, R., Fang, L., Dey, S. K., Browne, K. P., … Stoddart, J. F. (2009). Assembly of polygonal nanoparticle clusters directed by reversible noncovalent bonding interactions. <i>Nano Letters</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/nl901385c\">https://doi.org/10.1021/nl901385c</a>","mla":"Olson, Mark A., et al. “Assembly of Polygonal Nanoparticle Clusters Directed by Reversible Noncovalent Bonding Interactions.” <i>Nano Letters</i>, vol. 9, no. 9, American Chemical Society, 2009, pp. 3185–90, doi:<a href=\"https://doi.org/10.1021/nl901385c\">10.1021/nl901385c</a>.","ieee":"M. A. Olson <i>et al.</i>, “Assembly of polygonal nanoparticle clusters directed by reversible noncovalent bonding interactions,” <i>Nano Letters</i>, vol. 9, no. 9. American Chemical Society, pp. 3185–3190, 2009.","short":"M.A. Olson, A. Coskun, R. Klajn, L. Fang, S.K. Dey, K.P. Browne, B.A. Grzybowski, J.F. Stoddart, Nano Letters 9 (2009) 3185–3190."},"volume":9,"year":"2009","scopus_import":"1","publication_identifier":{"issn":["1530-6984"],"eissn":["1530-6992"]},"type":"journal_article","abstract":[{"lang":"eng","text":"The reversible molecular template-directed self-assembly of gold nanoparticles (AuNPs), a process which relies solely on noncovalent bonding interactions, has been demonstrated by high-resolution transmission electron microscopy (HR-TEM). By employing a well-known host−guest binding motif, the AuNPs have been systemized into discrete dimers, trimers, and tetramers. These nanoparticulate twins, triplets, and quadruplets, which can be disassembled and reassembled either chemically or electrochemically, can be coalesced into larger, permanent polygonal structures by thermal treatment using a focused HR-TEM electron beam."}],"title":"Assembly of polygonal nanoparticle clusters directed by reversible noncovalent bonding interactions","date_updated":"2023-08-08T08:57:34Z","issue":"9","date_published":"2009-09-09T00:00:00Z"},{"pmid":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"13417","extern":"1","publication_status":"published","author":[{"full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","first_name":"Rafal","last_name":"Klajn"},{"full_name":"Wesson, Paul J.","last_name":"Wesson","first_name":"Paul J."},{"first_name":"Kyle J. M.","last_name":"Bishop","full_name":"Bishop, Kyle J. M."},{"last_name":"Grzybowski","first_name":"Bartosz A.","full_name":"Grzybowski, Bartosz A."}],"publisher":"Wiley","doi":"10.1002/anie.200901119","type":"journal_article","publication_identifier":{"issn":["1433-7851"],"eissn":["1521-3773"]},"scopus_import":"1","volume":48,"year":"2009","keyword":["General Chemistry","Catalysis"],"oa_version":"None","citation":{"chicago":"Klajn, Rafal, Paul J. Wesson, Kyle J. M. Bishop, and Bartosz A. Grzybowski. “Writing Self-Erasing Images Using Metastable Nanoparticle ‘Inks.’” <i>Angewandte Chemie International Edition</i>. Wiley, 2009. <a href=\"https://doi.org/10.1002/anie.200901119\">https://doi.org/10.1002/anie.200901119</a>.","ista":"Klajn R, Wesson PJ, Bishop KJM, Grzybowski BA. 2009. Writing self-erasing images using metastable nanoparticle “inks”. Angewandte Chemie International Edition. 48(38), 7035–7039.","mla":"Klajn, Rafal, et al. “Writing Self-Erasing Images Using Metastable Nanoparticle ‘Inks.’” <i>Angewandte Chemie International Edition</i>, vol. 48, no. 38, Wiley, 2009, pp. 7035–39, doi:<a href=\"https://doi.org/10.1002/anie.200901119\">10.1002/anie.200901119</a>.","ieee":"R. Klajn, P. J. Wesson, K. J. M. Bishop, and B. A. Grzybowski, “Writing self-erasing images using metastable nanoparticle ‘inks,’” <i>Angewandte Chemie International Edition</i>, vol. 48, no. 38. Wiley, pp. 7035–7039, 2009.","short":"R. Klajn, P.J. Wesson, K.J.M. Bishop, B.A. Grzybowski, Angewandte Chemie International Edition 48 (2009) 7035–7039.","ama":"Klajn R, Wesson PJ, Bishop KJM, Grzybowski BA. Writing self-erasing images using metastable nanoparticle “inks.” <i>Angewandte Chemie International Edition</i>. 2009;48(38):7035-7039. doi:<a href=\"https://doi.org/10.1002/anie.200901119\">10.1002/anie.200901119</a>","apa":"Klajn, R., Wesson, P. J., Bishop, K. J. M., &#38; Grzybowski, B. A. (2009). Writing self-erasing images using metastable nanoparticle “inks.” <i>Angewandte Chemie International Edition</i>. Wiley. <a href=\"https://doi.org/10.1002/anie.200901119\">https://doi.org/10.1002/anie.200901119</a>"},"date_published":"2009-09-01T00:00:00Z","issue":"38","date_updated":"2023-08-08T08:59:15Z","title":"Writing self-erasing images using metastable nanoparticle “inks”","abstract":[{"text":"Mission Impossible: Metal nanoparticles (NPs) coated with photoresponsive ligands are used as “inks” for self-erasing “paper” whereby light-induced self-assembly of the NPs is transduced into local color changes (see picture). Depending on the degree of self-assembly, multicolor images can be written using only one type of NP ink. Duration of image erasure is regulated by the surface concentration of photoactive groups and can range from seconds to days.","lang":"eng"}],"quality_controlled":"1","article_processing_charge":"No","intvolume":"        48","external_id":{"pmid":["19533698"]},"article_type":"original","month":"09","language":[{"iso":"eng"}],"date_created":"2023-08-01T10:29:38Z","status":"public","publication":"Angewandte Chemie International Edition","page":"7035-7039","day":"01"},{"language":[{"iso":"eng"}],"month":"07","article_type":"original","page":"371-375","publication":"Nature","day":"16","date_created":"2023-08-01T10:29:50Z","status":"public","quality_controlled":"1","article_processing_charge":"No","intvolume":"       460","external_id":{"pmid":["19606145"]},"keyword":["Multidisciplinary"],"citation":{"ama":"Nakanishi H, Bishop KJM, Kowalczyk B, et al. Photoconductance and inverse photoconductance in films of functionalized metal nanoparticles. <i>Nature</i>. 2009;460(7253):371-375. doi:<a href=\"https://doi.org/10.1038/nature08131\">10.1038/nature08131</a>","apa":"Nakanishi, H., Bishop, K. J. M., Kowalczyk, B., Nitzan, A., Weiss, E. A., Tretiakov, K. V., … Grzybowski, B. A. (2009). Photoconductance and inverse photoconductance in films of functionalized metal nanoparticles. <i>Nature</i>. Springer Nature. <a href=\"https://doi.org/10.1038/nature08131\">https://doi.org/10.1038/nature08131</a>","mla":"Nakanishi, Hideyuki, et al. “Photoconductance and Inverse Photoconductance in Films of Functionalized Metal Nanoparticles.” <i>Nature</i>, vol. 460, no. 7253, Springer Nature, 2009, pp. 371–75, doi:<a href=\"https://doi.org/10.1038/nature08131\">10.1038/nature08131</a>.","ieee":"H. Nakanishi <i>et al.</i>, “Photoconductance and inverse photoconductance in films of functionalized metal nanoparticles,” <i>Nature</i>, vol. 460, no. 7253. Springer Nature, pp. 371–375, 2009.","short":"H. Nakanishi, K.J.M. Bishop, B. Kowalczyk, A. Nitzan, E.A. Weiss, K.V. Tretiakov, M.M. Apodaca, R. Klajn, J.F. Stoddart, B.A. Grzybowski, Nature 460 (2009) 371–375.","ista":"Nakanishi H, Bishop KJM, Kowalczyk B, Nitzan A, Weiss EA, Tretiakov KV, Apodaca MM, Klajn R, Stoddart JF, Grzybowski BA. 2009. Photoconductance and inverse photoconductance in films of functionalized metal nanoparticles. Nature. 460(7253), 371–375.","chicago":"Nakanishi, Hideyuki, Kyle J. M. Bishop, Bartlomiej Kowalczyk, Abraham Nitzan, Emily A. Weiss, Konstantin V. Tretiakov, Mario M. Apodaca, Rafal Klajn, J. Fraser Stoddart, and Bartosz A. Grzybowski. “Photoconductance and Inverse Photoconductance in Films of Functionalized Metal Nanoparticles.” <i>Nature</i>. Springer Nature, 2009. <a href=\"https://doi.org/10.1038/nature08131\">https://doi.org/10.1038/nature08131</a>."},"oa_version":"None","publication_identifier":{"eissn":["1476-4687"],"issn":["0028-0836"]},"type":"journal_article","volume":460,"year":"2009","scopus_import":"1","title":"Photoconductance and inverse photoconductance in films of functionalized metal nanoparticles","abstract":[{"text":"In traditional photoconductors1,2,3, the impinging light generates mobile charge carriers in the valence and/or conduction bands, causing the material’s conductivity to increase4. Such positive photoconductance is observed in both bulk and nanostructured5,6 photoconductors. Here we describe a class of nanoparticle-based materials whose conductivity can either increase or decrease on irradiation with visible light of wavelengths close to the particles’ surface plasmon resonance. The remarkable feature of these plasmonic materials is that the sign of the conductivity change and the nature of the electron transport between the nanoparticles depend on the molecules comprising the self-assembled monolayers (SAMs)7,8 stabilizing the nanoparticles. For SAMs made of electrically neutral (polar and non-polar) molecules, conductivity increases on irradiation. If, however, the SAMs contain electrically charged (either negatively or positively) groups, conductivity decreases. The optical and electrical characteristics of these previously undescribed inverse photoconductors can be engineered flexibly by adjusting the material properties of the nanoparticles and of the coating SAMs. In particular, in films comprising mixtures of different nanoparticles or nanoparticles coated with mixed SAMs, the overall photoconductance is a weighted average of the changes induced by the individual components. These and other observations can be rationalized in terms of light-induced creation of mobile charge carriers whose transport through the charged SAMs is inhibited by carrier trapping in transient polaron-like states9,10. The nanoparticle-based photoconductors we describe could have uses in chemical sensors and/or in conjunction with flexible substrates.","lang":"eng"}],"issue":"7253","date_published":"2009-07-16T00:00:00Z","date_updated":"2023-08-08T09:00:59Z","_id":"13418","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","extern":"1","pmid":1,"publisher":"Springer Nature","doi":"10.1038/nature08131","publication_status":"published","author":[{"full_name":"Nakanishi, Hideyuki","first_name":"Hideyuki","last_name":"Nakanishi"},{"last_name":"Bishop","first_name":"Kyle J. M.","full_name":"Bishop, Kyle J. M."},{"first_name":"Bartlomiej","last_name":"Kowalczyk","full_name":"Kowalczyk, Bartlomiej"},{"full_name":"Nitzan, Abraham","first_name":"Abraham","last_name":"Nitzan"},{"full_name":"Weiss, Emily A.","last_name":"Weiss","first_name":"Emily A."},{"full_name":"Tretiakov, Konstantin V.","last_name":"Tretiakov","first_name":"Konstantin V."},{"first_name":"Mario M.","last_name":"Apodaca","full_name":"Apodaca, Mario M."},{"last_name":"Klajn","first_name":"Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","full_name":"Klajn, Rafal"},{"last_name":"Stoddart","first_name":"J. Fraser","full_name":"Stoddart, J. Fraser"},{"first_name":"Bartosz A.","last_name":"Grzybowski","full_name":"Grzybowski, Bartosz A."}]},{"article_type":"original","month":"05","language":[{"iso":"eng"}],"status":"public","date_created":"2023-08-01T10:30:04Z","day":"18","publication":"Advanced Materials","page":"1911-1915","intvolume":"        21","article_processing_charge":"No","quality_controlled":"1","scopus_import":"1","year":"2009","volume":21,"type":"journal_article","publication_identifier":{"eissn":["1521-4095"],"issn":["0935-9648"]},"keyword":["Mechanical Engineering","Mechanics of Materials","General Materials Science"],"oa_version":"None","citation":{"mla":"Wesson, Paul J., et al. “‘Remote’ Fabrication via Three-Dimensional Reaction-Diffusion: Making Complex Core-and-Shell Particles and Assembling Them into Open-Lattice Crystals.” <i>Advanced Materials</i>, vol. 21, no. 19, Wiley, 2009, pp. 1911–15, doi:<a href=\"https://doi.org/10.1002/adma.200802964\">10.1002/adma.200802964</a>.","ieee":"P. J. Wesson, S. Soh, R. Klajn, K. J. M. Bishop, T. P. Gray, and B. A. Grzybowski, “‘Remote’ fabrication via three-dimensional reaction-diffusion: Making complex core-and-shell particles and assembling them into open-lattice crystals,” <i>Advanced Materials</i>, vol. 21, no. 19. Wiley, pp. 1911–1915, 2009.","short":"P.J. Wesson, S. Soh, R. Klajn, K.J.M. Bishop, T.P. Gray, B.A. Grzybowski, Advanced Materials 21 (2009) 1911–1915.","apa":"Wesson, P. J., Soh, S., Klajn, R., Bishop, K. J. M., Gray, T. P., &#38; Grzybowski, B. A. (2009). “Remote” fabrication via three-dimensional reaction-diffusion: Making complex core-and-shell particles and assembling them into open-lattice crystals. <i>Advanced Materials</i>. Wiley. <a href=\"https://doi.org/10.1002/adma.200802964\">https://doi.org/10.1002/adma.200802964</a>","ama":"Wesson PJ, Soh S, Klajn R, Bishop KJM, Gray TP, Grzybowski BA. “Remote” fabrication via three-dimensional reaction-diffusion: Making complex core-and-shell particles and assembling them into open-lattice crystals. <i>Advanced Materials</i>. 2009;21(19):1911-1915. doi:<a href=\"https://doi.org/10.1002/adma.200802964\">10.1002/adma.200802964</a>","chicago":"Wesson, Paul J., Siowling Soh, Rafal Klajn, Kyle J. M. Bishop, Timothy P. Gray, and Bartosz A. Grzybowski. “‘Remote’ Fabrication via Three-Dimensional Reaction-Diffusion: Making Complex Core-and-Shell Particles and Assembling Them into Open-Lattice Crystals.” <i>Advanced Materials</i>. Wiley, 2009. <a href=\"https://doi.org/10.1002/adma.200802964\">https://doi.org/10.1002/adma.200802964</a>.","ista":"Wesson PJ, Soh S, Klajn R, Bishop KJM, Gray TP, Grzybowski BA. 2009. “Remote” fabrication via three-dimensional reaction-diffusion: Making complex core-and-shell particles and assembling them into open-lattice crystals. Advanced Materials. 21(19), 1911–1915."},"date_updated":"2023-08-08T09:04:07Z","date_published":"2009-05-18T00:00:00Z","issue":"19","abstract":[{"text":"Reaction-diffusion (RD) processes initiated from the surfaces of mesoscopic particles can fabricate complex core-and-shell structures. The propagation of a sharp RD front selectively removes metal colloids or nanoparticles from the supporting gel or polymer matrix. Once fabricated, the core structures can be processed “remotely” via galvanic replacement reactions, and the composite particles can be assembled into open-lattice crystals.","lang":"eng"}],"title":"“Remote” fabrication via three-dimensional reaction-diffusion: Making complex core-and-shell particles and assembling them into open-lattice crystals","extern":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"13419","publication_status":"published","author":[{"last_name":"Wesson","first_name":"Paul J.","full_name":"Wesson, Paul J."},{"last_name":"Soh","first_name":"Siowling","full_name":"Soh, Siowling"},{"full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","first_name":"Rafal","last_name":"Klajn"},{"full_name":"Bishop, Kyle J. M.","last_name":"Bishop","first_name":"Kyle J. M."},{"last_name":"Gray","first_name":"Timothy P.","full_name":"Gray, Timothy P."},{"last_name":"Grzybowski","first_name":"Bartosz A.","full_name":"Grzybowski, Bartosz A."}],"doi":"10.1002/adma.200802964","publisher":"Wiley"},{"title":"Metal nanoparticles functionalized with molecular and supramolecular switches","abstract":[{"lang":"eng","text":"Weakly protected metal nanoparticles (MNPs) are used as precursors for the preparation of catenane- and pseudorotaxane-decorated NPs of various compositions (gold, palladium, platinum). When attached to the surface of MNPs, the molecular switches retain their switching abilities. The redox potentials of these switches depend on and can be regulated by the composition of the mixed self-assembled monolayers covering the MNPs."}],"date_published":"2009-04-01T00:00:00Z","issue":"12","date_updated":"2023-08-08T09:06:00Z","citation":{"short":"R. Klajn, L. Fang, A. Coskun, M.A. Olson, P.J. Wesson, J.F. Stoddart, B.A. Grzybowski, Journal of the American Chemical Society 131 (2009) 4233–4235.","mla":"Klajn, Rafal, et al. “Metal Nanoparticles Functionalized with Molecular and Supramolecular Switches.” <i>Journal of the American Chemical Society</i>, vol. 131, no. 12, American Chemical Society, 2009, pp. 4233–35, doi:<a href=\"https://doi.org/10.1021/ja9001585\">10.1021/ja9001585</a>.","ieee":"R. Klajn <i>et al.</i>, “Metal nanoparticles functionalized with molecular and supramolecular switches,” <i>Journal of the American Chemical Society</i>, vol. 131, no. 12. American Chemical Society, pp. 4233–4235, 2009.","ama":"Klajn R, Fang L, Coskun A, et al. Metal nanoparticles functionalized with molecular and supramolecular switches. <i>Journal of the American Chemical Society</i>. 2009;131(12):4233-4235. doi:<a href=\"https://doi.org/10.1021/ja9001585\">10.1021/ja9001585</a>","apa":"Klajn, R., Fang, L., Coskun, A., Olson, M. A., Wesson, P. J., Stoddart, J. F., &#38; Grzybowski, B. A. (2009). Metal nanoparticles functionalized with molecular and supramolecular switches. <i>Journal of the American Chemical Society</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/ja9001585\">https://doi.org/10.1021/ja9001585</a>","chicago":"Klajn, Rafal, Lei Fang, Ali Coskun, Mark A. Olson, Paul J. Wesson, J. Fraser Stoddart, and Bartosz A. Grzybowski. “Metal Nanoparticles Functionalized with Molecular and Supramolecular Switches.” <i>Journal of the American Chemical Society</i>. American Chemical Society, 2009. <a href=\"https://doi.org/10.1021/ja9001585\">https://doi.org/10.1021/ja9001585</a>.","ista":"Klajn R, Fang L, Coskun A, Olson MA, Wesson PJ, Stoddart JF, Grzybowski BA. 2009. Metal nanoparticles functionalized with molecular and supramolecular switches. Journal of the American Chemical Society. 131(12), 4233–4235."},"oa_version":"None","keyword":["Colloid and Surface Chemistry","Biochemistry","General Chemistry","Catalysis"],"type":"journal_article","publication_identifier":{"eissn":["1520-5126"],"issn":["0002-7863"]},"scopus_import":"1","volume":131,"year":"2009","publisher":"American Chemical Society","doi":"10.1021/ja9001585","publication_status":"published","author":[{"id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","full_name":"Klajn, Rafal","last_name":"Klajn","first_name":"Rafal"},{"full_name":"Fang, Lei","first_name":"Lei","last_name":"Fang"},{"first_name":"Ali","last_name":"Coskun","full_name":"Coskun, Ali"},{"first_name":"Mark A.","last_name":"Olson","full_name":"Olson, Mark A."},{"last_name":"Wesson","first_name":"Paul J.","full_name":"Wesson, Paul J."},{"full_name":"Stoddart, J. Fraser","first_name":"J. Fraser","last_name":"Stoddart"},{"last_name":"Grzybowski","first_name":"Bartosz A.","full_name":"Grzybowski, Bartosz A."}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"13420","extern":"1","pmid":1,"publication":"Journal of the American Chemical Society","page":"4233-4235","day":"01","date_created":"2023-08-01T10:30:17Z","status":"public","language":[{"iso":"eng"}],"article_type":"original","month":"04","external_id":{"pmid":["19265400"]},"article_processing_charge":"No","quality_controlled":"1","intvolume":"       131"},{"article_processing_charge":"No","quality_controlled":"1","intvolume":"        48","external_id":{"pmid":["19180620"]},"language":[{"iso":"eng"}],"article_type":"original","month":"02","publication":"Angewandte Chemie International Edition","page":"1792-1797","day":"23","date_created":"2023-08-01T10:30:30Z","status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"13421","extern":"1","pmid":1,"publisher":"Wiley","doi":"10.1002/anie.200804558","publication_status":"published","author":[{"full_name":"Olson, Mark A.","last_name":"Olson","first_name":"Mark A."},{"first_name":"Adam B.","last_name":"Braunschweig","full_name":"Braunschweig, Adam B."},{"full_name":"Fang, Lei","first_name":"Lei","last_name":"Fang"},{"last_name":"Ikeda","first_name":"Taichi","full_name":"Ikeda, Taichi"},{"id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","full_name":"Klajn, Rafal","last_name":"Klajn","first_name":"Rafal"},{"last_name":"Trabolsi","first_name":"Ali","full_name":"Trabolsi, Ali"},{"full_name":"Wesson, Paul J.","last_name":"Wesson","first_name":"Paul J."},{"first_name":"Diego","last_name":"Benítez","full_name":"Benítez, Diego"},{"full_name":"Mirkin, Chad A.","first_name":"Chad A.","last_name":"Mirkin"},{"first_name":"Bartosz A.","last_name":"Grzybowski","full_name":"Grzybowski, Bartosz A."},{"full_name":"Stoddart, J. Fraser","first_name":"J. Fraser","last_name":"Stoddart"}],"keyword":["General Chemistry","Catalysis"],"citation":{"short":"M.A. Olson, A.B. Braunschweig, L. Fang, T. Ikeda, R. Klajn, A. Trabolsi, P.J. Wesson, D. Benítez, C.A. Mirkin, B.A. Grzybowski, J.F. Stoddart, Angewandte Chemie International Edition 48 (2009) 1792–1797.","ieee":"M. A. Olson <i>et al.</i>, “A bistable poly[2]catenane forms nanosuperstructures,” <i>Angewandte Chemie International Edition</i>, vol. 48, no. 10. Wiley, pp. 1792–1797, 2009.","mla":"Olson, Mark A., et al. “A Bistable Poly[2]Catenane Forms Nanosuperstructures.” <i>Angewandte Chemie International Edition</i>, vol. 48, no. 10, Wiley, 2009, pp. 1792–97, doi:<a href=\"https://doi.org/10.1002/anie.200804558\">10.1002/anie.200804558</a>.","ama":"Olson MA, Braunschweig AB, Fang L, et al. A bistable poly[2]catenane forms nanosuperstructures. <i>Angewandte Chemie International Edition</i>. 2009;48(10):1792-1797. doi:<a href=\"https://doi.org/10.1002/anie.200804558\">10.1002/anie.200804558</a>","apa":"Olson, M. A., Braunschweig, A. B., Fang, L., Ikeda, T., Klajn, R., Trabolsi, A., … Stoddart, J. F. (2009). A bistable poly[2]catenane forms nanosuperstructures. <i>Angewandte Chemie International Edition</i>. Wiley. <a href=\"https://doi.org/10.1002/anie.200804558\">https://doi.org/10.1002/anie.200804558</a>","chicago":"Olson, Mark A., Adam B. Braunschweig, Lei Fang, Taichi Ikeda, Rafal Klajn, Ali Trabolsi, Paul J. Wesson, et al. “A Bistable Poly[2]Catenane Forms Nanosuperstructures.” <i>Angewandte Chemie International Edition</i>. Wiley, 2009. <a href=\"https://doi.org/10.1002/anie.200804558\">https://doi.org/10.1002/anie.200804558</a>.","ista":"Olson MA, Braunschweig AB, Fang L, Ikeda T, Klajn R, Trabolsi A, Wesson PJ, Benítez D, Mirkin CA, Grzybowski BA, Stoddart JF. 2009. A bistable poly[2]catenane forms nanosuperstructures. Angewandte Chemie International Edition. 48(10), 1792–1797."},"oa_version":"None","type":"journal_article","publication_identifier":{"issn":["1433-7851"],"eissn":["1521-3773"]},"scopus_import":"1","volume":48,"year":"2009","title":"A bistable poly[2]catenane forms nanosuperstructures","abstract":[{"text":"Side-chain poly[2]catenanes at the click of a switch! A bistable side-chain poly[2]catenane has been synthesized and found to form hierarchical self-assembled hollow superstructures of nanoscale dimensions in solution. Molecular electromechanical switching (see picture) of the material is demonstrated, and the ground-state equilibrium thermodynamics and switching kinetics are examined as the initial steps towards processible molecular-based electronic devices and nanoelectromechanical systems.","lang":"eng"}],"date_published":"2009-02-23T00:00:00Z","issue":"10","date_updated":"2023-08-08T11:12:29Z"},{"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","file_date_updated":"2020-07-14T12:46:43Z","_id":"5392","department":[{"_id":"KrCh"}],"author":[{"last_name":"Chatterjee","first_name":"Krishnendu","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-4561-241X","full_name":"Chatterjee, Krishnendu"}],"publication_status":"published","oa":1,"doi":"10.15479/AT:IST-2009-0004","has_accepted_license":"1","file":[{"relation":"main_file","content_type":"application/pdf","creator":"system","date_updated":"2020-07-14T12:46:43Z","checksum":"fb7563150231325b00b1718d956f687b","file_id":"5530","file_name":"IST-2009-0004_IST-2009-0004.pdf","date_created":"2018-12-12T11:54:08Z","access_level":"open_access","file_size":311065}],"alternative_title":["IST Austria Technical Report"],"publisher":"IST Austria","pubrep_id":"28","year":"2009","type":"technical_report","publication_identifier":{"issn":["2664-1690"]},"month":"11","language":[{"iso":"eng"}],"citation":{"ama":"Chatterjee K. <i>Probabilistic Automata on Infinite Words: Decidability and Undecidability Results</i>. IST Austria; 2009. doi:<a href=\"https://doi.org/10.15479/AT:IST-2009-0004\">10.15479/AT:IST-2009-0004</a>","apa":"Chatterjee, K. (2009). <i>Probabilistic automata on infinite words: Decidability and undecidability results</i>. IST Austria. <a href=\"https://doi.org/10.15479/AT:IST-2009-0004\">https://doi.org/10.15479/AT:IST-2009-0004</a>","short":"K. Chatterjee, Probabilistic Automata on Infinite Words: Decidability and Undecidability Results, IST Austria, 2009.","mla":"Chatterjee, Krishnendu. <i>Probabilistic Automata on Infinite Words: Decidability and Undecidability Results</i>. IST Austria, 2009, doi:<a href=\"https://doi.org/10.15479/AT:IST-2009-0004\">10.15479/AT:IST-2009-0004</a>.","ieee":"K. Chatterjee, <i>Probabilistic automata on infinite words: Decidability and undecidability results</i>. IST Austria, 2009.","ista":"Chatterjee K. 2009. Probabilistic automata on infinite words: Decidability and undecidability results, IST Austria, 17p.","chicago":"Chatterjee, Krishnendu. <i>Probabilistic Automata on Infinite Words: Decidability and Undecidability Results</i>. IST Austria, 2009. <a href=\"https://doi.org/10.15479/AT:IST-2009-0004\">https://doi.org/10.15479/AT:IST-2009-0004</a>."},"oa_version":"Published Version","date_updated":"2023-02-23T11:45:44Z","status":"public","date_published":"2009-11-02T00:00:00Z","date_created":"2018-12-12T11:39:04Z","ddc":["005"],"day":"02","abstract":[{"text":"We consider probabilistic automata on infinite words with acceptance defined by safety, reachability, Büchi, coBüchi and limit-average conditions. We consider quantitative and qualitative decision problems. We present extensions and adaptations of proofs of [GO09] and present a precise characterization of the decidability and undecidability frontier of the quantitative and qualitative decision problems.","lang":"eng"}],"related_material":{"record":[{"relation":"later_version","id":"3857","status":"public"}]},"title":"Probabilistic automata on infinite words: Decidability and undecidability results","page":"17"},{"status":"public","date_updated":"2023-02-23T12:09:01Z","date_published":"2009-10-09T00:00:00Z","date_created":"2018-12-12T11:39:05Z","ddc":["000","005"],"day":"09","abstract":[{"text":"Gist is a tool that (a) solves the qualitative analysis problem of turn-based probabilistic games with ω-regular objectives; and (b) synthesizes reasonable environment assumptions for synthesis of unrealizable specifications. Our tool provides efficient implementations of several reduction based techniques to solve turn-based probabilistic games, and uses the analysis of turn-based probabilistic games for synthesizing environment assumptions for unrealizable specifications.","lang":"eng"}],"title":"Gist: A solver for probabilistic games","related_material":{"record":[{"status":"public","id":"4388","relation":"later_version"}]},"page":"12","pubrep_id":"29","year":"2009","type":"technical_report","publication_identifier":{"issn":["2664-1690"]},"month":"10","language":[{"iso":"eng"}],"oa_version":"Published Version","citation":{"ista":"Chatterjee K, Henzinger TA, Jobstmann B, Radhakrishna A. 2009. Gist: A solver for probabilistic games, IST Austria, 12p.","chicago":"Chatterjee, Krishnendu, Thomas A Henzinger, Barbara Jobstmann, and Arjun Radhakrishna. <i>Gist: A Solver for Probabilistic Games</i>. IST Austria, 2009. <a href=\"https://doi.org/10.15479/AT:IST-2009-0003\">https://doi.org/10.15479/AT:IST-2009-0003</a>.","ama":"Chatterjee K, Henzinger TA, Jobstmann B, Radhakrishna A. <i>Gist: A Solver for Probabilistic Games</i>. IST Austria; 2009. doi:<a href=\"https://doi.org/10.15479/AT:IST-2009-0003\">10.15479/AT:IST-2009-0003</a>","apa":"Chatterjee, K., Henzinger, T. A., Jobstmann, B., &#38; Radhakrishna, A. (2009). <i>Gist: A solver for probabilistic games</i>. IST Austria. <a href=\"https://doi.org/10.15479/AT:IST-2009-0003\">https://doi.org/10.15479/AT:IST-2009-0003</a>","short":"K. Chatterjee, T.A. Henzinger, B. Jobstmann, A. Radhakrishna, Gist: A Solver for Probabilistic Games, IST Austria, 2009.","mla":"Chatterjee, Krishnendu, et al. <i>Gist: A Solver for Probabilistic Games</i>. IST Austria, 2009, doi:<a href=\"https://doi.org/10.15479/AT:IST-2009-0003\">10.15479/AT:IST-2009-0003</a>.","ieee":"K. Chatterjee, T. A. Henzinger, B. Jobstmann, and A. Radhakrishna, <i>Gist: A solver for probabilistic games</i>. IST Austria, 2009."},"department":[{"_id":"KrCh"},{"_id":"ToHe"}],"publication_status":"published","oa":1,"author":[{"id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","full_name":"Chatterjee, Krishnendu","orcid":"0000-0002-4561-241X","last_name":"Chatterjee","first_name":"Krishnendu"},{"orcid":"0000−0002−2985−7724","full_name":"Henzinger, Thomas A","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","first_name":"Thomas A","last_name":"Henzinger"},{"full_name":"Jobstmann, Barbara","first_name":"Barbara","last_name":"Jobstmann"},{"full_name":"Radhakrishna, Arjun","id":"3B51CAC4-F248-11E8-B48F-1D18A9856A87","first_name":"Arjun","last_name":"Radhakrishna"}],"has_accepted_license":"1","doi":"10.15479/AT:IST-2009-0003","file":[{"date_updated":"2020-07-14T12:46:43Z","checksum":"49551ac552915b17593a14c993845274","file_id":"5459","access_level":"open_access","file_name":"IST-2009-0003_IST-2009-0003.pdf","date_created":"2018-12-12T11:52:58Z","file_size":386866,"content_type":"application/pdf","creator":"system","relation":"main_file"}],"alternative_title":["IST Austria Technical Report"],"publisher":"IST Austria","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","file_date_updated":"2020-07-14T12:46:43Z","_id":"5393"},{"title":"Improved lower bounds for request-response and finitary Streett games","page":"11","day":"09","abstract":[{"text":"We consider two-player games played on graphs with request-response and finitary Streett objectives. We show these games are PSPACE-hard, improving the previous known NP-hardness. We also improve the lower bounds on memory required by the winning strategies for the players.","lang":"eng"}],"date_published":"2009-09-09T00:00:00Z","ddc":["004"],"date_created":"2018-12-12T11:39:05Z","date_updated":"2020-07-14T23:07:47Z","status":"public","citation":{"ama":"Chatterjee K, Henzinger TA, Horn F. <i>Improved Lower Bounds for Request-Response and Finitary Streett Games</i>. IST Austria; 2009. doi:<a href=\"https://doi.org/10.15479/AT:IST-2009-0002\">10.15479/AT:IST-2009-0002</a>","apa":"Chatterjee, K., Henzinger, T. A., &#38; Horn, F. (2009). <i>Improved lower bounds for request-response and finitary Streett games</i>. IST Austria. <a href=\"https://doi.org/10.15479/AT:IST-2009-0002\">https://doi.org/10.15479/AT:IST-2009-0002</a>","mla":"Chatterjee, Krishnendu, et al. <i>Improved Lower Bounds for Request-Response and Finitary Streett Games</i>. IST Austria, 2009, doi:<a href=\"https://doi.org/10.15479/AT:IST-2009-0002\">10.15479/AT:IST-2009-0002</a>.","ieee":"K. Chatterjee, T. A. Henzinger, and F. Horn, <i>Improved lower bounds for request-response and finitary Streett games</i>. IST Austria, 2009.","short":"K. Chatterjee, T.A. Henzinger, F. Horn, Improved Lower Bounds for Request-Response and Finitary Streett Games, IST Austria, 2009.","ista":"Chatterjee K, Henzinger TA, Horn F. 2009. Improved lower bounds for request-response and finitary Streett games, IST Austria, 11p.","chicago":"Chatterjee, Krishnendu, Thomas A Henzinger, and Florian Horn. <i>Improved Lower Bounds for Request-Response and Finitary Streett Games</i>. IST Austria, 2009. <a href=\"https://doi.org/10.15479/AT:IST-2009-0002\">https://doi.org/10.15479/AT:IST-2009-0002</a>."},"oa_version":"Published Version","language":[{"iso":"eng"}],"type":"technical_report","month":"09","publication_identifier":{"issn":["2664-1690"]},"year":"2009","pubrep_id":"30","alternative_title":["IST Austria Technical Report"],"file":[{"file_id":"5511","checksum":"1c50a9723fbae1b2c46d18138968efb3","date_updated":"2020-07-14T12:46:43Z","file_size":238091,"date_created":"2018-12-12T11:53:50Z","access_level":"open_access","file_name":"IST-2009-0002_IST-2009-0002.pdf","creator":"system","content_type":"application/pdf","relation":"main_file"}],"publisher":"IST Austria","doi":"10.15479/AT:IST-2009-0002","has_accepted_license":"1","author":[{"id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-4561-241X","full_name":"Chatterjee, Krishnendu","last_name":"Chatterjee","first_name":"Krishnendu"},{"orcid":"0000−0002−2985−7724","full_name":"Henzinger, Thomas A","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","first_name":"Thomas A","last_name":"Henzinger"},{"first_name":"Florian","last_name":"Horn","full_name":"Horn, Florian","id":"37327ACE-F248-11E8-B48F-1D18A9856A87"}],"oa":1,"publication_status":"published","department":[{"_id":"KrCh"},{"_id":"ToHe"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","file_date_updated":"2020-07-14T12:46:43Z","_id":"5394"},{"status":"public","date_updated":"2023-02-23T11:45:39Z","date_published":"2009-09-09T00:00:00Z","ddc":["005"],"date_created":"2018-12-12T11:39:05Z","day":"09","abstract":[{"lang":"eng","text":"We study observation-based strategies for partially-observable Markov decision processes (POMDPs) with omega-regular objectives. An observation-based strategy relies on partial information about the history of a play, namely, on the past sequence of observa- tions. We consider the qualitative analysis problem: given a POMDP with an omega-regular objective, whether there is an observation-based strategy to achieve the objective with probability 1 (almost-sure winning), or with positive probability (positive winning). Our main results are twofold. First, we present a complete picture of the computational complexity of the qualitative analysis of POMDPs with parity objectives (a canonical form to express omega-regular objectives) and its subclasses. Our contribution consists in establishing several upper and lower bounds that were not known in literature. Second, we present optimal bounds (matching upper and lower bounds) on the memory required by pure and randomized observation-based strategies for the qualitative analysis of POMDPs with parity objectives and its subclasses."}],"related_material":{"record":[{"status":"public","relation":"later_version","id":"3855"}]},"title":"Qualitative analysis of partially-observable Markov decision processes","page":"20","pubrep_id":"31","year":"2009","type":"technical_report","publication_identifier":{"issn":["2664-1690"]},"month":"09","language":[{"iso":"eng"}],"citation":{"mla":"Chatterjee, Krishnendu, et al. <i>Qualitative Analysis of Partially-Observable Markov Decision Processes</i>. IST Austria, 2009, doi:<a href=\"https://doi.org/10.15479/AT:IST-2009-0001\">10.15479/AT:IST-2009-0001</a>.","ieee":"K. Chatterjee, L. Doyen, and T. A. Henzinger, <i>Qualitative analysis of partially-observable Markov decision processes</i>. IST Austria, 2009.","short":"K. Chatterjee, L. Doyen, T.A. Henzinger, Qualitative Analysis of Partially-Observable Markov Decision Processes, IST Austria, 2009.","ama":"Chatterjee K, Doyen L, Henzinger TA. <i>Qualitative Analysis of Partially-Observable Markov Decision Processes</i>. IST Austria; 2009. doi:<a href=\"https://doi.org/10.15479/AT:IST-2009-0001\">10.15479/AT:IST-2009-0001</a>","apa":"Chatterjee, K., Doyen, L., &#38; Henzinger, T. A. (2009). <i>Qualitative analysis of partially-observable Markov decision processes</i>. IST Austria. <a href=\"https://doi.org/10.15479/AT:IST-2009-0001\">https://doi.org/10.15479/AT:IST-2009-0001</a>","chicago":"Chatterjee, Krishnendu, Laurent Doyen, and Thomas A Henzinger. <i>Qualitative Analysis of Partially-Observable Markov Decision Processes</i>. IST Austria, 2009. <a href=\"https://doi.org/10.15479/AT:IST-2009-0001\">https://doi.org/10.15479/AT:IST-2009-0001</a>.","ista":"Chatterjee K, Doyen L, Henzinger TA. 2009. Qualitative analysis of partially-observable Markov decision processes, IST Austria, 20p."},"oa_version":"Published Version","department":[{"_id":"KrCh"},{"_id":"ToHe"}],"oa":1,"publication_status":"published","author":[{"orcid":"0000-0002-4561-241X","full_name":"Chatterjee, Krishnendu","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","first_name":"Krishnendu","last_name":"Chatterjee"},{"first_name":"Laurent","last_name":"Doyen","full_name":"Doyen, Laurent"},{"last_name":"Henzinger","first_name":"Thomas A","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","orcid":"0000−0002−2985−7724","full_name":"Henzinger, Thomas A"}],"doi":"10.15479/AT:IST-2009-0001","has_accepted_license":"1","alternative_title":["IST Austria Technical Report"],"file":[{"relation":"main_file","checksum":"04d9cc065cc19598a4e8631c47f1a562","date_updated":"2020-07-14T12:46:43Z","file_id":"5486","date_created":"2018-12-12T11:53:25Z","access_level":"open_access","file_name":"IST-2009-0001_IST-2009-0001.pdf","file_size":342088,"content_type":"application/pdf","creator":"system"}],"publisher":"IST Austria","file_date_updated":"2020-07-14T12:46:43Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"5395"},{"publisher":"Cold Spring Harbor Laboratory Press","doi":"10.1101/gad.1767009","publist_id":"7211","oa":1,"author":[{"last_name":"Knuesel","first_name":"Matthew","full_name":"Knuesel, Matthew"},{"full_name":"Meyer, Krista","first_name":"Krista","last_name":"Meyer"},{"last_name":"Bernecky","first_name":"Carrie A","id":"2CB9DFE2-F248-11E8-B48F-1D18A9856A87","full_name":"Bernecky, Carrie A","orcid":"0000-0003-0893-7036"},{"full_name":"Taatjes, Dylan","first_name":"Dylan","last_name":"Taatjes"}],"publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"599","article_processing_charge":"No","intvolume":"        23","extern":"1","publication":"Genes and Development","title":"The human CDK8 subcomplex is a molecular switch that controls Mediator coactivator function","page":"439 - 451","day":"15","abstract":[{"text":"The human CDK8 subcomplex (CDK8, cyclin C, Med12, and Med13) negatively regulates transcription in ways not completely defined; past studies suggested CDK8 kinase activity was required for its repressive function. Using a reconstituted transcription system together with recombinant or endogenous CDK8 subcomplexes, we demonstrate that, in fact, Med12 and Med13 are critical for subcomplex-dependent repression, whereas CDK8 kinase activity is not. A hallmark of activated transcription is efficient reinitiation from promoter-bound scaffold complexes that recruit a series of pol II enzymes to the gene. Notably, the CDK8 submodule strongly represses even reinitiation events, suggesting a means to fine tune transcript levels. Structural and biochemical studies confirm the CDK8 submodule binds the Mediator leg/tail domain via the Med13 subunit, and this submodule-Mediator association precludes pol II recruitment. Collectively, these results reveal the CDK8 subcomplex functions as a simple switch that controls the Mediator-pol II interaction to help regulate transcription initiation and reinitiation events. As Mediator is generally required for expression of protein-coding genes, this may reflect a common mechanism by which activated transcription is shut down in human cells.","lang":"eng"}],"main_file_link":[{"url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2648653/","open_access":"1"}],"date_published":"2009-02-15T00:00:00Z","issue":"4","date_created":"2018-12-11T11:47:25Z","date_updated":"2021-01-12T08:05:32Z","status":"public","oa_version":"None","citation":{"chicago":"Knuesel, Matthew, Krista Meyer, Carrie Bernecky, and Dylan Taatjes. “The Human CDK8 Subcomplex Is a Molecular Switch That Controls Mediator Coactivator Function.” <i>Genes and Development</i>. Cold Spring Harbor Laboratory Press, 2009. <a href=\"https://doi.org/10.1101/gad.1767009\">https://doi.org/10.1101/gad.1767009</a>.","ista":"Knuesel M, Meyer K, Bernecky C, Taatjes D. 2009. The human CDK8 subcomplex is a molecular switch that controls Mediator coactivator function. Genes and Development. 23(4), 439–451.","ieee":"M. Knuesel, K. Meyer, C. Bernecky, and D. Taatjes, “The human CDK8 subcomplex is a molecular switch that controls Mediator coactivator function,” <i>Genes and Development</i>, vol. 23, no. 4. Cold Spring Harbor Laboratory Press, pp. 439–451, 2009.","mla":"Knuesel, Matthew, et al. “The Human CDK8 Subcomplex Is a Molecular Switch That Controls Mediator Coactivator Function.” <i>Genes and Development</i>, vol. 23, no. 4, Cold Spring Harbor Laboratory Press, 2009, pp. 439–51, doi:<a href=\"https://doi.org/10.1101/gad.1767009\">10.1101/gad.1767009</a>.","short":"M. Knuesel, K. Meyer, C. Bernecky, D. Taatjes, Genes and Development 23 (2009) 439–451.","apa":"Knuesel, M., Meyer, K., Bernecky, C., &#38; Taatjes, D. (2009). The human CDK8 subcomplex is a molecular switch that controls Mediator coactivator function. <i>Genes and Development</i>. Cold Spring Harbor Laboratory Press. <a href=\"https://doi.org/10.1101/gad.1767009\">https://doi.org/10.1101/gad.1767009</a>","ama":"Knuesel M, Meyer K, Bernecky C, Taatjes D. The human CDK8 subcomplex is a molecular switch that controls Mediator coactivator function. <i>Genes and Development</i>. 2009;23(4):439-451. doi:<a href=\"https://doi.org/10.1101/gad.1767009\">10.1101/gad.1767009</a>"},"language":[{"iso":"eng"}],"type":"journal_article","month":"02","volume":23,"year":"2009"},{"publication_status":"published","author":[{"full_name":"Persson, Annelie","last_name":"Persson","first_name":"Annelie"},{"full_name":"Gross, Einav","last_name":"Gross","first_name":"Einav"},{"first_name":"Patrick","last_name":"Laurent","full_name":"Laurent, Patrick"},{"first_name":"Karl Emanuel","last_name":"Busch","full_name":"Busch, Karl Emanuel"},{"first_name":"Hugo","last_name":"Bretes","full_name":"Bretes, Hugo"},{"first_name":"Mario","last_name":"de Bono","orcid":"0000-0001-8347-0443","full_name":"de Bono, Mario","id":"4E3FF80E-F248-11E8-B48F-1D18A9856A87"}],"publisher":"Springer Nature","external_id":{"pmid":["19262507"]},"doi":"10.1038/nature07820","pmid":1,"quality_controlled":"1","_id":"6144","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","extern":"1","intvolume":"       458","date_created":"2019-03-21T07:48:44Z","issue":"7241","date_published":"2009-04-23T00:00:00Z","status":"public","date_updated":"2021-01-12T08:06:20Z","page":"1030-1033","title":"Natural variation in a neural globin tunes oxygen sensing in wild Caenorhabditis elegans","publication":"Nature","abstract":[{"text":"Behaviours evolve by iterations of natural selection, but we have few insights into the molecular and neural mechanisms involved. Here we show that some Caenorhabditis elegans wild strains switch between two foraging behaviours in response to subtle changes in ambient oxygen. This finely tuned switch is conferred by a naturally variable hexacoordinated globin, GLB-5. GLB-5 acts with the atypical soluble guanylate cyclases1,2,3, which are a different type of oxygen binding protein, to tune the dynamic range of oxygen-sensing neurons close to atmospheric (21%) concentrations. Calcium imaging indicates that one group of these neurons is activated when oxygen rises towards 21%, and is inhibited as oxygen drops below 21%. The soluble guanylate cyclase GCY-35 is required for high oxygen to activate the neurons; GLB-5 provides inhibitory input when oxygen decreases below 21%. Together, these oxygen binding proteins tune neuronal and behavioural responses to a narrow oxygen concentration range close to atmospheric levels. The effect of the glb-5 gene on oxygen sensing and foraging is modified by the naturally variable neuropeptide receptor npr-1 (refs 4, 5), providing insights into how polygenic variation reshapes neural circuit function.","lang":"eng"}],"day":"23","month":"04","publication_identifier":{"issn":["0028-0836","1476-4687"]},"type":"journal_article","volume":458,"year":"2009","oa_version":"None","citation":{"ista":"Persson A, Gross E, Laurent P, Busch KE, Bretes H, de Bono M. 2009. Natural variation in a neural globin tunes oxygen sensing in wild Caenorhabditis elegans. Nature. 458(7241), 1030–1033.","chicago":"Persson, Annelie, Einav Gross, Patrick Laurent, Karl Emanuel Busch, Hugo Bretes, and Mario de Bono. “Natural Variation in a Neural Globin Tunes Oxygen Sensing in Wild Caenorhabditis Elegans.” <i>Nature</i>. Springer Nature, 2009. <a href=\"https://doi.org/10.1038/nature07820\">https://doi.org/10.1038/nature07820</a>.","apa":"Persson, A., Gross, E., Laurent, P., Busch, K. E., Bretes, H., &#38; de Bono, M. (2009). Natural variation in a neural globin tunes oxygen sensing in wild Caenorhabditis elegans. <i>Nature</i>. Springer Nature. <a href=\"https://doi.org/10.1038/nature07820\">https://doi.org/10.1038/nature07820</a>","ama":"Persson A, Gross E, Laurent P, Busch KE, Bretes H, de Bono M. Natural variation in a neural globin tunes oxygen sensing in wild Caenorhabditis elegans. <i>Nature</i>. 2009;458(7241):1030-1033. doi:<a href=\"https://doi.org/10.1038/nature07820\">10.1038/nature07820</a>","mla":"Persson, Annelie, et al. “Natural Variation in a Neural Globin Tunes Oxygen Sensing in Wild Caenorhabditis Elegans.” <i>Nature</i>, vol. 458, no. 7241, Springer Nature, 2009, pp. 1030–33, doi:<a href=\"https://doi.org/10.1038/nature07820\">10.1038/nature07820</a>.","ieee":"A. Persson, E. Gross, P. Laurent, K. E. Busch, H. Bretes, and M. de Bono, “Natural variation in a neural globin tunes oxygen sensing in wild Caenorhabditis elegans,” <i>Nature</i>, vol. 458, no. 7241. Springer Nature, pp. 1030–1033, 2009.","short":"A. Persson, E. Gross, P. Laurent, K.E. Busch, H. Bretes, M. de Bono, Nature 458 (2009) 1030–1033."},"language":[{"iso":"eng"}]},{"day":"08","page":"375-385","title":"Coordinated regulation of foraging and metabolism in C. elegans by RFamide neuropeptide signaling","publication":"Cell Metabolism","date_updated":"2021-01-12T08:06:20Z","status":"public","date_created":"2019-03-21T07:57:52Z","issue":"4","date_published":"2009-04-08T00:00:00Z","language":[{"iso":"eng"}],"citation":{"short":"M. Cohen, V. Reale, B. Olofsson, A. Knights, P. Evans, M. de Bono, Cell Metabolism 9 (2009) 375–385.","ieee":"M. Cohen, V. Reale, B. Olofsson, A. Knights, P. Evans, and M. de Bono, “Coordinated regulation of foraging and metabolism in C. elegans by RFamide neuropeptide signaling,” <i>Cell Metabolism</i>, vol. 9, no. 4. Elsevier, pp. 375–385, 2009.","mla":"Cohen, Merav, et al. “Coordinated Regulation of Foraging and Metabolism in C. Elegans by RFamide Neuropeptide Signaling.” <i>Cell Metabolism</i>, vol. 9, no. 4, Elsevier, 2009, pp. 375–85, doi:<a href=\"https://doi.org/10.1016/j.cmet.2009.02.003\">10.1016/j.cmet.2009.02.003</a>.","ama":"Cohen M, Reale V, Olofsson B, Knights A, Evans P, de Bono M. Coordinated regulation of foraging and metabolism in C. elegans by RFamide neuropeptide signaling. <i>Cell Metabolism</i>. 2009;9(4):375-385. doi:<a href=\"https://doi.org/10.1016/j.cmet.2009.02.003\">10.1016/j.cmet.2009.02.003</a>","apa":"Cohen, M., Reale, V., Olofsson, B., Knights, A., Evans, P., &#38; de Bono, M. (2009). Coordinated regulation of foraging and metabolism in C. elegans by RFamide neuropeptide signaling. <i>Cell Metabolism</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.cmet.2009.02.003\">https://doi.org/10.1016/j.cmet.2009.02.003</a>","chicago":"Cohen, Merav, Vincenzina Reale, Birgitta Olofsson, Andrew Knights, Peter Evans, and Mario de Bono. “Coordinated Regulation of Foraging and Metabolism in C. Elegans by RFamide Neuropeptide Signaling.” <i>Cell Metabolism</i>. Elsevier, 2009. <a href=\"https://doi.org/10.1016/j.cmet.2009.02.003\">https://doi.org/10.1016/j.cmet.2009.02.003</a>.","ista":"Cohen M, Reale V, Olofsson B, Knights A, Evans P, de Bono M. 2009. Coordinated regulation of foraging and metabolism in C. elegans by RFamide neuropeptide signaling. Cell Metabolism. 9(4), 375–385."},"oa_version":"None","volume":9,"year":"2009","publication_identifier":{"issn":["1550-4131"]},"month":"04","type":"journal_article","doi":"10.1016/j.cmet.2009.02.003","publisher":"Elsevier","external_id":{"pmid":["19356718"]},"publication_status":"published","author":[{"full_name":"Cohen, Merav","first_name":"Merav","last_name":"Cohen"},{"first_name":"Vincenzina","last_name":"Reale","full_name":"Reale, Vincenzina"},{"full_name":"Olofsson, Birgitta","last_name":"Olofsson","first_name":"Birgitta"},{"first_name":"Andrew","last_name":"Knights","full_name":"Knights, Andrew"},{"full_name":"Evans, Peter","last_name":"Evans","first_name":"Peter"},{"id":"4E3FF80E-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-8347-0443","full_name":"de Bono, Mario","last_name":"de Bono","first_name":"Mario"}],"extern":"1","intvolume":"         9","quality_controlled":"1","_id":"6145","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","pmid":1},{"type":"journal_article","year":"2009","volume":95,"citation":{"short":"M. Mark, J.G. Danzl, E. Haller, M. Gustavsson, N. Bouloufa, O. Dulieu, H. Salami, T. Bergeman, H. Ritsch, R. Hart, H. Nägerl, Applied Physics B: Lasers and Optics 95 (2009) 219–225.","ieee":"M. Mark <i>et al.</i>, “Dark resonances for ground-state transfer of molecular quantum gases,” <i>Applied Physics B: Lasers and Optics</i>, vol. 95, no. 2. Springer, pp. 219–225, 2009.","mla":"Mark, Manfred, et al. “Dark Resonances for Ground-State Transfer of Molecular Quantum Gases.” <i>Applied Physics B: Lasers and Optics</i>, vol. 95, no. 2, Springer, 2009, pp. 219–25, doi:<a href=\"https://doi.org/10.1007/s00340-009-3407-1\">10.1007/s00340-009-3407-1</a>.","apa":"Mark, M., Danzl, J. G., Haller, E., Gustavsson, M., Bouloufa, N., Dulieu, O., … Nägerl, H. (2009). Dark resonances for ground-state transfer of molecular quantum gases. <i>Applied Physics B: Lasers and Optics</i>. Springer. <a href=\"https://doi.org/10.1007/s00340-009-3407-1\">https://doi.org/10.1007/s00340-009-3407-1</a>","ama":"Mark M, Danzl JG, Haller E, et al. Dark resonances for ground-state transfer of molecular quantum gases. <i>Applied Physics B: Lasers and Optics</i>. 2009;95(2):219-225. doi:<a href=\"https://doi.org/10.1007/s00340-009-3407-1\">10.1007/s00340-009-3407-1</a>","chicago":"Mark, Manfred, Johann G Danzl, Elmar Haller, Mattias Gustavsson, Nadia Bouloufa, Olivier Dulieu, Houssam Salami, et al. “Dark Resonances for Ground-State Transfer of Molecular Quantum Gases.” <i>Applied Physics B: Lasers and Optics</i>. Springer, 2009. <a href=\"https://doi.org/10.1007/s00340-009-3407-1\">https://doi.org/10.1007/s00340-009-3407-1</a>.","ista":"Mark M, Danzl JG, Haller E, Gustavsson M, Bouloufa N, Dulieu O, Salami H, Bergeman T, Ritsch H, Hart R, Nägerl H. 2009. Dark resonances for ground-state transfer of molecular quantum gases. Applied Physics B: Lasers and Optics. 95(2), 219–225."},"oa_version":"None","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/0811.0695"}],"date_published":"2009-05-01T00:00:00Z","issue":"2","date_updated":"2021-01-12T06:47:50Z","title":"Dark resonances for ground-state transfer of molecular quantum gases","abstract":[{"lang":"eng","text":"One possible way to produce ultra-cold, high-phase-space-density quantum gases of molecules in the rovibronic ground state is given by molecule association from quantum-degenerate atomic gases on a Feshbach resonance and subsequent coherent optical multi-photon transfer into the rovibronic ground state. In ultra-cold samples of Cs2 molecules, we observe two-photon dark resonances that connect the intermediate rovibrational level |v=73,J=2 with the rovibrational ground state |v=0,J=0 of the singlet X 1 ∑ g + ground-state potential. For precise dark resonance spectroscopy we exploit the fact that it is possible to efficiently populate the level |v=73,J=2 by two-photon transfer from the dissociation threshold with the stimulated Raman adiabatic passage (STIRAP) technique. We find that at least one of the two-photon resonances is sufficiently strong to allow future implementation of coherent STIRAP transfer of a molecular quantum gas to the rovibrational ground state |v=0,J=0."}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"1038","extern":"1","author":[{"full_name":"Mark, Manfred","first_name":"Manfred","last_name":"Mark"},{"orcid":"0000-0001-8559-3973","full_name":"Danzl, Johann G","id":"42EFD3B6-F248-11E8-B48F-1D18A9856A87","first_name":"Johann G","last_name":"Danzl"},{"full_name":"Haller, Elmar","last_name":"Haller","first_name":"Elmar"},{"full_name":"Gustavsson, Mattias","first_name":"Mattias","last_name":"Gustavsson"},{"first_name":"Nadia","last_name":"Bouloufa","full_name":"Bouloufa, Nadia"},{"full_name":"Dulieu, Olivier","first_name":"Olivier","last_name":"Dulieu"},{"first_name":"Houssam","last_name":"Salami","full_name":"Salami, Houssam"},{"full_name":"Bergeman, Thomas","first_name":"Thomas","last_name":"Bergeman"},{"first_name":"Helmut","last_name":"Ritsch","full_name":"Ritsch, Helmut"},{"last_name":"Hart","first_name":"Russell","full_name":"Hart, Russell"},{"full_name":"Nägerl, Hanns","first_name":"Hanns","last_name":"Nägerl"}],"publication_status":"published","arxiv":1,"publisher":"Springer","doi":"10.1007/s00340-009-3407-1","month":"05","language":[{"iso":"eng"}],"date_created":"2018-12-11T11:49:49Z","status":"public","publication":"Applied Physics B: Lasers and Optics","page":"219 - 225","day":"01","acknowledgement":"We are indebted to R. Grimm for generous support and we thank E. Tiemann for valuable discussions and C. Amiot for providing the FTS data of LAC on Cs2. We gratefully acknowledge funding by the Austrian Ministry of Science and Research (BMWF)\r\nand the Austrian Science Fund (FWF) in the form of a START prize grant and by the European Science Foundation (ESF) in the framework of the EuroQUAM collective research project QuDipMol. R.H. acknowledges support by the European Union in the form of a Marie Curie International Incoming Fellowship (IIF). The work at Stony Brook was supported by the US NSF, under grant PHY0652459.","article_processing_charge":"No","intvolume":"        95","oa":1,"external_id":{"arxiv":["0811.0695"]},"publist_id":"6350"},{"citation":{"chicago":"Haller, Elmar, Mattias Gustavsson, Manfred Mark, Johann G Danzl, Russell Hart, Guido Pupillo, and Hanns Nägerl. “Realization of an Excited, Strongly Correlated Quantum Gas Phase.” <i>Science</i>. American Association for the Advancement of Science, 2009. <a href=\"https://doi.org/10.1126/science.1175850\">https://doi.org/10.1126/science.1175850</a>.","ista":"Haller E, Gustavsson M, Mark M, Danzl JG, Hart R, Pupillo G, Nägerl H. 2009. Realization of an excited, strongly correlated quantum gas Phase. Science. 325(5945), 1224–1227.","ieee":"E. Haller <i>et al.</i>, “Realization of an excited, strongly correlated quantum gas Phase,” <i>Science</i>, vol. 325, no. 5945. American Association for the Advancement of Science, pp. 1224–1227, 2009.","mla":"Haller, Elmar, et al. “Realization of an Excited, Strongly Correlated Quantum Gas Phase.” <i>Science</i>, vol. 325, no. 5945, American Association for the Advancement of Science, 2009, pp. 1224–27, doi:<a href=\"https://doi.org/10.1126/science.1175850\">10.1126/science.1175850</a>.","short":"E. Haller, M. Gustavsson, M. Mark, J.G. Danzl, R. Hart, G. Pupillo, H. Nägerl, Science 325 (2009) 1224–1227.","ama":"Haller E, Gustavsson M, Mark M, et al. Realization of an excited, strongly correlated quantum gas Phase. <i>Science</i>. 2009;325(5945):1224-1227. doi:<a href=\"https://doi.org/10.1126/science.1175850\">10.1126/science.1175850</a>","apa":"Haller, E., Gustavsson, M., Mark, M., Danzl, J. G., Hart, R., Pupillo, G., &#38; Nägerl, H. (2009). Realization of an excited, strongly correlated quantum gas Phase. <i>Science</i>. American Association for the Advancement of Science. <a href=\"https://doi.org/10.1126/science.1175850\">https://doi.org/10.1126/science.1175850</a>"},"oa_version":"None","volume":325,"year":"2009","type":"journal_article","abstract":[{"lang":"eng","text":"Ultracold atomic physics offers myriad possibilities to study strongly correlated many-body systems in lower dimensions. Typically, only ground-state phases are accessible. Using a tunable quantum gas of bosonic cesium atoms, we realized and controlled in one-dimensional geometry a highly excited quantum phase that is stabilized in the presence of attractive interactions by maintaining and strengthening quantum correlations across a confinement-induced resonance. We diagnosed the crossover from repulsive to attractive interactions in terms of the stiffness and energy of the system. Our results open up the experimental study of metastable, excited, many-body phases with strong correlations and their dynamical properties."}],"title":"Realization of an excited, strongly correlated quantum gas Phase","date_updated":"2021-01-12T06:47:51Z","issue":"5945","date_published":"2009-01-01T00:00:00Z","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1006.0739"}],"extern":"1","_id":"1040","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","doi":"10.1126/science.1175850","publisher":"American Association for the Advancement of Science","arxiv":1,"author":[{"last_name":"Haller","first_name":"Elmar","full_name":"Haller, Elmar"},{"full_name":"Gustavsson, Mattias","first_name":"Mattias","last_name":"Gustavsson"},{"first_name":"Manfred","last_name":"Mark","full_name":"Mark, Manfred"},{"last_name":"Danzl","first_name":"Johann G","id":"42EFD3B6-F248-11E8-B48F-1D18A9856A87","full_name":"Danzl, Johann G","orcid":"0000-0001-8559-3973"},{"first_name":"Russell","last_name":"Hart","full_name":"Hart, Russell"},{"last_name":"Pupillo","first_name":"Guido","full_name":"Pupillo, Guido"},{"full_name":"Nägerl, Hanns","first_name":"Hanns","last_name":"Nägerl"}],"publication_status":"published","language":[{"iso":"eng"}],"month":"01","day":"01","page":"1224 - 1227","publication":"Science","status":"public","date_created":"2018-12-11T11:49:50Z","intvolume":"       325","article_processing_charge":"No","acknowledgement":"We thank S. Giorgini and C. Menotti for helpful discussions and for providing the theory curves shown in Fig. 3A. We are indebted to R. Grimm for generous support and to H. Häffner and his group for the loan of a charge-coupled device camera. We gratefully acknowledge funding by the Austrian Ministry of Science and Research (Bundesministerium für Wissenschaft und Forschung) and the Austrian Science Fund (Fonds zur Förderung der wissenschaftlichen Forschung) in the form of a START prize grant and by the European Union through the Specific Targeted Research Project FP7-ICT-2007-C project NAME-QUAM (Nanodesigning of Atomic and Molecular Quantum Matter) and within the framework of the EuroQUASAR collective research project Quantum-Degenerate Gases for Precision Measurements. R.H. is supported by a Marie Curie International Incoming Fellowship within the 7th European Community Framework Programme.","publist_id":"6348","external_id":{"arxiv":["1006.0739"]},"oa":1}]