[{"department":[{"_id":"NiBa"}],"publication_status":"published","author":[{"id":"4880FE40-F248-11E8-B48F-1D18A9856A87","full_name":"Barton, Nicholas H","orcid":"0000-0002-8548-5240","last_name":"Barton","first_name":"Nicholas H"},{"last_name":"Kelleher","first_name":"Jerome","full_name":"Kelleher, Jerome"},{"first_name":"Alison","last_name":"Etheridge","full_name":"Etheridge, Alison"}],"publist_id":"2780","doi":"10.1111/j.1558-5646.2010.01019.x","publisher":"Wiley-Blackwell","intvolume":" 64","_id":"474","quality_controlled":"1","acknowledgement":"This work has made use of the resources provided by the Edinburgh Compute and Data Facility (ECDF). The ECDF is partially supported by the eDIKT initiative. NHB is supported in part by EPSRC Grant EP/E066070/1; JK is supported by EPSRC Grant EP/E066070/1; and AME is supported in part by EPSRC Grant EP/E065945/1.","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","date_updated":"2021-01-12T08:00:52Z","status":"public","issue":"9","date_created":"2018-12-11T11:46:40Z","date_published":"2010-09-01T00:00:00Z","abstract":[{"text":"Classical models of gene flow fail in three ways: they cannot explain large-scale patterns; they predict much more genetic diversity than is observed; and they assume that loosely linked genetic loci evolve independently. We propose a new model that deals with these problems. Extinction events kill some fraction of individuals in a region. These are replaced by offspring from a small number of parents, drawn from the preexisting population. This model of evolution forwards in time corresponds to a backwards model, in which ancestral lineages jump to a new location if they are hit by an event, and may coalesce with other lineages that are hit by the same event. We derive an expression for the identity in allelic state, and show that, over scales much larger than the largest event, this converges to the classical value derived by Wright and Malécot. However, rare events that cover large areas cause low genetic diversity, large-scale patterns, and correlations in ancestry between unlinked loci.","lang":"eng"}],"day":"01","page":"2701 - 2715","title":"A new model for extinction and recolonization in two dimensions: Quantifying phylogeography","publication":"Evolution","volume":64,"year":"2010","scopus_import":1,"month":"09","type":"journal_article","language":[{"iso":"eng"}],"oa_version":"None","citation":{"ista":"Barton NH, Kelleher J, Etheridge A. 2010. A new model for extinction and recolonization in two dimensions: Quantifying phylogeography. Evolution. 64(9), 2701–2715.","chicago":"Barton, Nicholas H, Jerome Kelleher, and Alison Etheridge. “A New Model for Extinction and Recolonization in Two Dimensions: Quantifying Phylogeography.” Evolution. Wiley-Blackwell, 2010. https://doi.org/10.1111/j.1558-5646.2010.01019.x.","apa":"Barton, N. H., Kelleher, J., & Etheridge, A. (2010). A new model for extinction and recolonization in two dimensions: Quantifying phylogeography. Evolution. Wiley-Blackwell. https://doi.org/10.1111/j.1558-5646.2010.01019.x","ama":"Barton NH, Kelleher J, Etheridge A. A new model for extinction and recolonization in two dimensions: Quantifying phylogeography. Evolution. 2010;64(9):2701-2715. doi:10.1111/j.1558-5646.2010.01019.x","short":"N.H. Barton, J. Kelleher, A. Etheridge, Evolution 64 (2010) 2701–2715.","ieee":"N. H. Barton, J. Kelleher, and A. Etheridge, “A new model for extinction and recolonization in two dimensions: Quantifying phylogeography,” Evolution, vol. 64, no. 9. Wiley-Blackwell, pp. 2701–2715, 2010.","mla":"Barton, Nicholas H., et al. “A New Model for Extinction and Recolonization in Two Dimensions: Quantifying Phylogeography.” Evolution, vol. 64, no. 9, Wiley-Blackwell, 2010, pp. 2701–15, doi:10.1111/j.1558-5646.2010.01019.x."}},{"oa_version":"Published Version","citation":{"short":"R. Alur, P. Cerny, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2010, pp. 1–12.","ieee":"R. Alur and P. Cerny, “Expressiveness of streaming string transducers,” presented at the FSTTCS: Foundations of Software Technology and Theoretical Computer Science, Chennai, India, 2010, vol. 8, pp. 1–12.","mla":"Alur, Rajeev, and Pavol Cerny. Expressiveness of Streaming String Transducers. Vol. 8, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2010, pp. 1–12, doi:10.4230/LIPIcs.FSTTCS.2010.1.","ama":"Alur R, Cerny P. Expressiveness of streaming string transducers. In: Vol 8. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2010:1-12. doi:10.4230/LIPIcs.FSTTCS.2010.1","apa":"Alur, R., & Cerny, P. (2010). Expressiveness of streaming string transducers (Vol. 8, pp. 1–12). Presented at the FSTTCS: Foundations of Software Technology and Theoretical Computer Science, Chennai, India: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. https://doi.org/10.4230/LIPIcs.FSTTCS.2010.1","chicago":"Alur, Rajeev, and Pavol Cerny. “Expressiveness of Streaming String Transducers,” 8:1–12. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2010. https://doi.org/10.4230/LIPIcs.FSTTCS.2010.1.","ista":"Alur R, Cerny P. 2010. Expressiveness of streaming string transducers. FSTTCS: Foundations of Software Technology and Theoretical Computer Science, LIPIcs, vol. 8, 1–12."},"scopus_import":1,"year":"2010","volume":8,"type":"conference","abstract":[{"text":"Streaming string transducers [1] define (partial) functions from input strings to output strings. A streaming string transducer makes a single pass through the input string and uses a finite set of variables that range over strings from the output alphabet. At every step, the transducer processes an input symbol, and updates all the variables in parallel using assignments whose right-hand-sides are concatenations of output symbols and variables with the restriction that a variable can be used at most once in a right-hand-side expression. It has been shown that streaming string transducers operating on strings over infinite data domains are of interest in algorithmic verification of list-processing programs, as they lead to PSPACE decision procedures for checking pre/post conditions and for checking semantic equivalence, for a well-defined class of heap-manipulating programs. In order to understand the theoretical expressiveness of streaming transducers, we focus on streaming transducers processing strings over finite alphabets, given the existence of a robust and well-studied class of "regular" transductions for this case. Such regular transductions can be defined either by two-way deterministic finite-state transducers, or using a logical MSO-based characterization. Our main result is that the expressiveness of streaming string transducers coincides exactly with this class of regular transductions. ","lang":"eng"}],"title":"Expressiveness of streaming string transducers","license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","date_updated":"2021-01-12T08:01:00Z","date_published":"2010-01-01T00:00:00Z","ddc":["005"],"user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","_id":"488","doi":"10.4230/LIPIcs.FSTTCS.2010.1","alternative_title":["LIPIcs"],"publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","department":[{"_id":"ToHe"}],"author":[{"full_name":"Alur, Rajeev","first_name":"Rajeev","last_name":"Alur"},{"first_name":"Pavol","last_name":"Cerny","full_name":"Cerny, Pavol","id":"4DCBEFFE-F248-11E8-B48F-1D18A9856A87"}],"publication_status":"published","language":[{"iso":"eng"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","short":"CC BY-NC-ND (4.0)","image":"/images/cc_by_nc_nd.png"},"pubrep_id":"948","month":"01","day":"01","conference":{"start_date":"2010-12-15","location":"Chennai, India","end_date":"2010-12-18","name":"FSTTCS: Foundations of Software Technology and Theoretical Computer Science"},"page":"1 - 12","status":"public","date_created":"2018-12-11T11:46:45Z","intvolume":" 8","file_date_updated":"2020-07-14T12:46:35Z","quality_controlled":"1","has_accepted_license":"1","publist_id":"7331","file":[{"file_id":"4690","date_updated":"2020-07-14T12:46:35Z","checksum":"5845be5aa19791830f7407d8853f2df0","file_size":492344,"file_name":"IST-2018-948-v1+1_2011_Cerny_Expressiveness_of.pdf","date_created":"2018-12-12T10:08:29Z","access_level":"open_access","creator":"system","content_type":"application/pdf","relation":"main_file"}],"oa":1},{"publist_id":"7332","oa":1,"intvolume":" 25","quality_controlled":"1","day":"09","page":"30 - 39","conference":{"end_date":"2010-06-18","name":"GandALF: Games, Automata, Logic, and Formal Verification","start_date":"2010-06-17","location":"Minori, Amalfi Coast, Italy"},"publication":"Proceedings of GandALF 2010","status":"public","date_created":"2018-12-11T11:46:45Z","language":[{"iso":"eng"}],"month":"06","doi":"10.4204/EPTCS.25.7","publisher":"Open Publishing Association","alternative_title":["EPTCS"],"department":[{"_id":"KrCh"}],"author":[{"first_name":"Julien","last_name":"Cristau","full_name":"Cristau, Julien"},{"full_name":"David, Claire","last_name":"David","first_name":"Claire"},{"id":"37327ACE-F248-11E8-B48F-1D18A9856A87","full_name":"Horn, Florian","last_name":"Horn","first_name":"Florian"}],"publication_status":"published","_id":"489","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","abstract":[{"text":"Graph games of infinite length are a natural model for open reactive processes: one player represents the controller, trying to ensure a given specification, and the other represents a hostile environment. The evolution of the system depends on the decisions of both players, supplemented by chance. In this work, we focus on the notion of randomised strategy. More specifically, we show that three natural definitions may lead to very different results: in the most general cases, an almost-surely winning situation may become almost-surely losing if the player is only allowed to use a weaker notion of strategy. In more reasonable settings, translations exist, but they require infinite memory, even in simple cases. Finally, some traditional problems becomes undecidable for the strongest type of strategies.","lang":"eng"}],"title":"How do we remember the past in randomised strategies? ","date_updated":"2021-01-12T08:01:01Z","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1006.1404v1"}],"date_published":"2010-06-09T00:00:00Z","citation":{"short":"J. Cristau, C. David, F. Horn, in:, Proceedings of GandALF 2010, Open Publishing Association, 2010, pp. 30–39.","mla":"Cristau, Julien, et al. “How Do We Remember the Past in Randomised Strategies? .” Proceedings of GandALF 2010, vol. 25, Open Publishing Association, 2010, pp. 30–39, doi:10.4204/EPTCS.25.7.","ieee":"J. Cristau, C. David, and F. Horn, “How do we remember the past in randomised strategies? ,” in Proceedings of GandALF 2010, Minori, Amalfi Coast, Italy, 2010, vol. 25, pp. 30–39.","ama":"Cristau J, David C, Horn F. How do we remember the past in randomised strategies? . In: Proceedings of GandALF 2010. Vol 25. Open Publishing Association; 2010:30-39. doi:10.4204/EPTCS.25.7","apa":"Cristau, J., David, C., & Horn, F. (2010). How do we remember the past in randomised strategies? . In Proceedings of GandALF 2010 (Vol. 25, pp. 30–39). Minori, Amalfi Coast, Italy: Open Publishing Association. https://doi.org/10.4204/EPTCS.25.7","chicago":"Cristau, Julien, Claire David, and Florian Horn. “How Do We Remember the Past in Randomised Strategies? .” In Proceedings of GandALF 2010, 25:30–39. Open Publishing Association, 2010. https://doi.org/10.4204/EPTCS.25.7.","ista":"Cristau J, David C, Horn F. 2010. How do we remember the past in randomised strategies? . Proceedings of GandALF 2010. GandALF: Games, Automata, Logic, and Formal Verification, EPTCS, vol. 25, 30–39."},"oa_version":"Published Version","volume":25,"year":"2010","scopus_import":1,"type":"conference"},{"title":"Doomed program points","publication":"Formal Methods in System Design","page":"171 - 199","day":"01","abstract":[{"lang":"eng","text":"Any programming error that can be revealed before compiling a program saves precious time for the programmer. While integrated development environments already do a good job by detecting, e.g., data-flow abnormalities, current static analysis tools suffer from false positives ("noise") or require strong user interaction. We propose to avoid this deficiency by defining a new class of errors. A program fragment is doomed if its execution will inevitably fail, regardless of which state it is started in. We use a formal verification method to identify such errors fully automatically and, most significantly, without producing noise. We report on experiments with a prototype tool."}],"date_published":"2010-12-01T00:00:00Z","issue":"2-3","date_created":"2018-12-11T11:47:01Z","status":"public","date_updated":"2021-01-12T08:01:28Z","oa_version":"None","citation":{"chicago":"Hoenicke, Jochen, Kari Leino, Andreas Podelski, Martin Schäf, and Thomas Wies. “Doomed Program Points.” Formal Methods in System Design. Springer, 2010. https://doi.org/10.1007/s10703-010-0102-0.","ista":"Hoenicke J, Leino K, Podelski A, Schäf M, Wies T. 2010. Doomed program points. Formal Methods in System Design. 37(2–3), 171–199.","short":"J. Hoenicke, K. Leino, A. Podelski, M. Schäf, T. Wies, Formal Methods in System Design 37 (2010) 171–199.","ieee":"J. Hoenicke, K. Leino, A. Podelski, M. Schäf, and T. Wies, “Doomed program points,” Formal Methods in System Design, vol. 37, no. 2–3. Springer, pp. 171–199, 2010.","mla":"Hoenicke, Jochen, et al. “Doomed Program Points.” Formal Methods in System Design, vol. 37, no. 2–3, Springer, 2010, pp. 171–99, doi:10.1007/s10703-010-0102-0.","ama":"Hoenicke J, Leino K, Podelski A, Schäf M, Wies T. Doomed program points. Formal Methods in System Design. 2010;37(2-3):171-199. doi:10.1007/s10703-010-0102-0","apa":"Hoenicke, J., Leino, K., Podelski, A., Schäf, M., & Wies, T. (2010). Doomed program points. Formal Methods in System Design. Springer. https://doi.org/10.1007/s10703-010-0102-0"},"language":[{"iso":"eng"}],"type":"journal_article","month":"12","scopus_import":1,"year":"2010","volume":37,"publisher":"Springer","doi":"10.1007/s10703-010-0102-0","publist_id":"7284","publication_status":"published","author":[{"first_name":"Jochen","last_name":"Hoenicke","full_name":"Hoenicke, Jochen"},{"full_name":"Leino, Kari","last_name":"Leino","first_name":"Kari"},{"first_name":"Andreas","last_name":"Podelski","full_name":"Podelski, Andreas"},{"full_name":"Schäf, Martin","last_name":"Schäf","first_name":"Martin"},{"id":"447BFB88-F248-11E8-B48F-1D18A9856A87","full_name":"Wies, Thomas","last_name":"Wies","first_name":"Thomas"}],"department":[{"_id":"ToHe"}],"user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","_id":"533","quality_controlled":"1","intvolume":" 37"},{"extern":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"12654","doi":"10.3189/002214309788608804","publisher":"Cambridge University Press","author":[{"full_name":"Carenzo, Marco","last_name":"Carenzo","first_name":"Marco"},{"last_name":"Pellicciotti","first_name":"Francesca","id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","full_name":"Pellicciotti, Francesca"},{"last_name":"Rimkus","first_name":"Stefan","full_name":"Rimkus, Stefan"},{"last_name":"Burlando","first_name":"Paolo","full_name":"Burlando, Paolo"}],"publication_status":"published","citation":{"chicago":"Carenzo, Marco, Francesca Pellicciotti, Stefan Rimkus, and Paolo Burlando. “Assessing the Transferability and Robustness of an Enhanced Temperature-Index Glacier-Melt Model.” Journal of Glaciology. Cambridge University Press, 2009. https://doi.org/10.3189/002214309788608804.","ista":"Carenzo M, Pellicciotti F, Rimkus S, Burlando P. 2009. Assessing the transferability and robustness of an enhanced temperature-index glacier-melt model. Journal of Glaciology. 55(190), 258–274.","short":"M. Carenzo, F. Pellicciotti, S. Rimkus, P. Burlando, Journal of Glaciology 55 (2009) 258–274.","mla":"Carenzo, Marco, et al. “Assessing the Transferability and Robustness of an Enhanced Temperature-Index Glacier-Melt Model.” Journal of Glaciology, vol. 55, no. 190, Cambridge University Press, 2009, pp. 258–74, doi:10.3189/002214309788608804.","ieee":"M. Carenzo, F. Pellicciotti, S. Rimkus, and P. Burlando, “Assessing the transferability and robustness of an enhanced temperature-index glacier-melt model,” Journal of Glaciology, vol. 55, no. 190. Cambridge University Press, pp. 258–274, 2009.","ama":"Carenzo M, Pellicciotti F, Rimkus S, Burlando P. Assessing the transferability and robustness of an enhanced temperature-index glacier-melt model. Journal of Glaciology. 2009;55(190):258-274. doi:10.3189/002214309788608804","apa":"Carenzo, M., Pellicciotti, F., Rimkus, S., & Burlando, P. (2009). Assessing the transferability and robustness of an enhanced temperature-index glacier-melt model. Journal of Glaciology. Cambridge University Press. https://doi.org/10.3189/002214309788608804"},"oa_version":"Published Version","scopus_import":"1","volume":55,"year":"2009","type":"journal_article","publication_identifier":{"eissn":["1727-5652"],"issn":["0022-1430"]},"abstract":[{"text":"We investigate the transferability of an enhanced temperature-index melt model that was developed and tested on Haut Glacier d’Arolla, Switzerland, in the 2001 season. The model’s empirical parameters (temperature factor, TF, and shortwave radiation factor, SRF) are recalibrated for: (1) other locations on Haut Glacier d’Arolla; (2) subperiods of distinct meteorological conditions; (3) different years on Haut Glacier d’Arolla; and (4) other glaciers in different years. The model parameters are optimized against simulations of an energy-balance model validated against ablation observations. Results are compared with those obtained with the original parameters. The model works very well when applied to other sites, seasons and glaciers, with the exception of overcast conditions. Differences are due to underestimation of high melt rates. The parameter values are associated with the prevailing energy-balance conditions, showing that high SRF are obtained on clear-sky days, whereas higher TF are typical of locations where glacier winds prevail and turbulent fluxes are high. We also provide a range of parameters clearly associated with the site’s location and its meteorological characteristics that could help to assign parameter values to sites where few data are available.","lang":"eng"}],"title":"Assessing the transferability and robustness of an enhanced temperature-index glacier-melt model","date_updated":"2023-02-20T09:06:27Z","main_file_link":[{"open_access":"1","url":"https://doi.org/10.3189/002214309788608804"}],"date_published":"2009-03-01T00:00:00Z","issue":"190","intvolume":" 55","article_processing_charge":"No","quality_controlled":"1","oa":1,"language":[{"iso":"eng"}],"month":"03","article_type":"original","day":"01","publication":"Journal of Glaciology","page":"258-274","status":"public","date_created":"2023-02-20T08:18:34Z"},{"publication":"Annals of Glaciology","page":"16-24","day":"01","date_created":"2023-02-20T08:18:40Z","status":"public","language":[{"iso":"eng"}],"article_type":"original","month":"01","oa":1,"quality_controlled":"1","article_processing_charge":"No","intvolume":" 50","title":"On the role of subsurface heat conduction in glacier energy-balance modelling","abstract":[{"text":"We discuss the inclusion of the subsurface heat-conduction flux into the calculation of the energy balance and ablation at the glacier–atmosphere interface. Data from automatic weather stations are used to force an energy-balance model at several locations on alpine glaciers and at one site in the dry Andes of central Chile. The heat-conduction flux is computed using a two-layer scheme, assuming that 36% of the net shortwave radiation is absorbed by the surface layer and that the rest penetrates into the snowpack. We compare simulations conducted with and without subsurface heat flux. Results show that assuming a surface temperature of zero degrees leads to a larger overestimation of melt at the sites in the accumulation area (10.4–13.3%) than in the ablation area (0.5–2.8%), due to lower air temperatures and the presence of snow. The difference between simulations with and without heat conduction is also high at the beginning and end of the ablation season (up to 29% for the first 15 days of the season), when air temperatures are lower and snow covers the glacier surface, while they are of little importance during periods of sustained melt at all the locations investigated.","lang":"eng"}],"main_file_link":[{"url":"https://doi.org/10.3189/172756409787769555","open_access":"1"}],"date_published":"2009-01-01T00:00:00Z","issue":"50","date_updated":"2023-02-20T09:00:53Z","citation":{"ista":"Pellicciotti F, Carenzo M, Helbing J, Rimkus S, Burlando P. 2009. On the role of subsurface heat conduction in glacier energy-balance modelling. Annals of Glaciology. 50(50), 16–24.","chicago":"Pellicciotti, Francesca, Marco Carenzo, Jakob Helbing, Stefan Rimkus, and Paolo Burlando. “On the Role of Subsurface Heat Conduction in Glacier Energy-Balance Modelling.” Annals of Glaciology. International Glaciological Society, 2009. https://doi.org/10.3189/172756409787769555.","apa":"Pellicciotti, F., Carenzo, M., Helbing, J., Rimkus, S., & Burlando, P. (2009). On the role of subsurface heat conduction in glacier energy-balance modelling. Annals of Glaciology. International Glaciological Society. https://doi.org/10.3189/172756409787769555","ama":"Pellicciotti F, Carenzo M, Helbing J, Rimkus S, Burlando P. On the role of subsurface heat conduction in glacier energy-balance modelling. Annals of Glaciology. 2009;50(50):16-24. doi:10.3189/172756409787769555","short":"F. Pellicciotti, M. Carenzo, J. Helbing, S. Rimkus, P. Burlando, Annals of Glaciology 50 (2009) 16–24.","mla":"Pellicciotti, Francesca, et al. “On the Role of Subsurface Heat Conduction in Glacier Energy-Balance Modelling.” Annals of Glaciology, vol. 50, no. 50, International Glaciological Society, 2009, pp. 16–24, doi:10.3189/172756409787769555.","ieee":"F. Pellicciotti, M. Carenzo, J. Helbing, S. Rimkus, and P. Burlando, “On the role of subsurface heat conduction in glacier energy-balance modelling,” Annals of Glaciology, vol. 50, no. 50. International Glaciological Society, pp. 16–24, 2009."},"oa_version":"Published Version","type":"journal_article","publication_identifier":{"eissn":["1727-5644"],"issn":["0260-3055"]},"scopus_import":"1","year":"2009","volume":50,"publisher":"International Glaciological Society","doi":"10.3189/172756409787769555","author":[{"id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","full_name":"Pellicciotti, Francesca","last_name":"Pellicciotti","first_name":"Francesca"},{"full_name":"Carenzo, Marco","last_name":"Carenzo","first_name":"Marco"},{"full_name":"Helbing, Jakob","first_name":"Jakob","last_name":"Helbing"},{"last_name":"Rimkus","first_name":"Stefan","full_name":"Rimkus, Stefan"},{"first_name":"Paolo","last_name":"Burlando","full_name":"Burlando, Paolo"}],"publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"12655","extern":"1"},{"citation":{"chicago":"Raghu, Shamprasad, Maximilian A Jösch, Stephan Sigrist, Alexander Borst, and Dierk Reiff. “Synaptic Organization of Lobula Plate Tangential Cells in Drosophila: Dα7 Cholinergic Receptors.” Journal of Neurogenetics. Informa Healthcare, 2009. https://doi.org/10.1080/01677060802471684.","ista":"Raghu S, Jösch MA, Sigrist S, Borst A, Reiff D. 2009. Synaptic organization of lobula plate tangential cells in Drosophila: Dα7 cholinergic receptors. Journal of Neurogenetics. 23(1–2), 200–209.","mla":"Raghu, Shamprasad, et al. “Synaptic Organization of Lobula Plate Tangential Cells in Drosophila: Dα7 Cholinergic Receptors.” Journal of Neurogenetics, vol. 23, no. 1–2, Informa Healthcare, 2009, pp. 200–09, doi:10.1080/01677060802471684.","ieee":"S. Raghu, M. A. Jösch, S. Sigrist, A. Borst, and D. Reiff, “Synaptic organization of lobula plate tangential cells in Drosophila: Dα7 cholinergic receptors,” Journal of Neurogenetics, vol. 23, no. 1–2. Informa Healthcare, pp. 200–209, 2009.","short":"S. Raghu, M.A. Jösch, S. Sigrist, A. Borst, D. Reiff, Journal of Neurogenetics 23 (2009) 200–209.","apa":"Raghu, S., Jösch, M. A., Sigrist, S., Borst, A., & Reiff, D. (2009). Synaptic organization of lobula plate tangential cells in Drosophila: Dα7 cholinergic receptors. Journal of Neurogenetics. Informa Healthcare. https://doi.org/10.1080/01677060802471684","ama":"Raghu S, Jösch MA, Sigrist S, Borst A, Reiff D. Synaptic organization of lobula plate tangential cells in Drosophila: Dα7 cholinergic receptors. Journal of Neurogenetics. 2009;23(1-2):200-209. doi:10.1080/01677060802471684"},"type":"journal_article","month":"03","year":"2009","volume":23,"publication":"Journal of Neurogenetics","title":"Synaptic organization of lobula plate tangential cells in Drosophila: Dα7 cholinergic receptors","page":"200 - 209","day":"01","abstract":[{"text":"The nervous system of seeing animals derives information about optic flow in two subsequent steps. First, local motion vectors are calculated from moving retinal images, and second, the spatial distribution of these vectors is analyzed on the dendrites of large downstream neurons. In dipteran flies, this second step relies on a set of motion-sensitive lobula plate tangential cells (LPTCs), which have been studied in great detail in large fly species. Yet, studies on neurons that convey information to LPTCs and neuroanatomical investigations that enable a mechanistic understanding of the underlying dendritic computations in LPTCs are rare. We investigated the subcellular distribution of nicotinic acetylcholine receptors (nAChRs) on two sets of LPTCs: vertical system (VS) and horizontal system (HS) cells in Drosophila melanogaster. In this paper, we describe that both cell types express Dα7-type nAChR subunits specifically on higher order dendritic branches, similar to the expression of gamma aminobutyric acid (GABA) receptors. These findings support a model in which directional selectivity of LPTCs is achieved by the dendritic integration of excitatory, cholinergic, and inhibitory GABA-ergic input from local motion detectors with opposite preferred direction. Nonetheless, whole-cell recordings in mutant flies without Dα7 nAChRs revealed that direction selectivity of VS and HS cells is largely retained. In addition, mutant LPTCs were responsive to acetylcholine and remaining nAChR receptors were labeled by α-bungarotoxin. These results in LPTCs with genetically manipulated excitatory input synapses suggest a robust cellular implementation of dendritic processing that warrants direction selectivity. The underlying mechanism that ensures appropriate nAChR-mediated synaptic currents and the functional implications of separate sets or heteromultimeric nAChRs can now be addressed in this system.","lang":"eng"}],"date_published":"2009-03-01T00:00:00Z","date_created":"2018-12-11T11:51:15Z","issue":"1-2","status":"public","date_updated":"2021-01-12T06:49:44Z","quality_controlled":0,"_id":"1302","intvolume":" 23","extern":1,"publisher":"Informa Healthcare","doi":"10.1080/01677060802471684","publist_id":"5972","publication_status":"published","author":[{"first_name":"Shamprasad","last_name":"Raghu","full_name":"Raghu, Shamprasad V"},{"id":"2BD278E6-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-3937-1330","full_name":"Maximilian Jösch","last_name":"Jösch","first_name":"Maximilian A"},{"first_name":"Stephan","last_name":"Sigrist","full_name":"Sigrist, Stephan J"},{"full_name":"Borst, Alexander","first_name":"Alexander","last_name":"Borst"},{"full_name":"Reiff, Dierk F","last_name":"Reiff","first_name":"Dierk"}]},{"publisher":"Wiley","doi":"10.1002/anie.200904411","author":[{"first_name":"Paul","last_name":"Schanda","orcid":"0000-0002-9350-7606","full_name":"Schanda, Paul","id":"7B541462-FAF6-11E9-A490-E8DFE5697425"},{"last_name":"Huber","first_name":"Matthias","full_name":"Huber, Matthias"},{"first_name":"René","last_name":"Verel","full_name":"Verel, René"},{"first_name":"Matthias","last_name":"Ernst","full_name":"Ernst, Matthias"},{"first_name":"Beatâ
H.","last_name":"Meier","full_name":"Meier, Beatâ
H."}],"publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"8474","article_processing_charge":"No","quality_controlled":"1","intvolume":" 48","extern":"1","publication":"Angewandte Chemie International Edition","title":"Direct detection of 3hJN' hydrogen-bond scalar couplings in proteins by solid-state NMR spectroscopy","page":"9322-9325","day":"17","abstract":[{"lang":"eng","text":"Hydrogen bonds are ubiquitous interactions in proteins, and are important for their folding and functionality. Scalar coupling constants across hydrogen bonds in the protein backbone, some as small as 0.5 Hz, can be directly measured in the solid state by NMR spectroscopy (see figure). The nuclei on both sides of the hydrogen bond can be identified and the size of the coupling constant can be measured accurately."}],"date_published":"2009-11-17T00:00:00Z","date_created":"2020-09-18T10:11:33Z","issue":"49","status":"public","date_updated":"2021-01-12T08:19:31Z","citation":{"ista":"Schanda P, Huber M, Verel R, Ernst M, Meier B. 2009. Direct detection of 3hJN’ hydrogen-bond scalar couplings in proteins by solid-state NMR spectroscopy. Angewandte Chemie International Edition. 48(49), 9322–9325.","chicago":"Schanda, Paul, Matthias Huber, René Verel, Matthias Ernst, and Beatâ
H. Meier. “Direct Detection of 3hJN’ Hydrogen-Bond Scalar Couplings in Proteins by Solid-State NMR Spectroscopy.” Angewandte Chemie International Edition. Wiley, 2009. https://doi.org/10.1002/anie.200904411.","apa":"Schanda, P., Huber, M., Verel, R., Ernst, M., & Meier, B. (2009). Direct detection of 3hJN’ hydrogen-bond scalar couplings in proteins by solid-state NMR spectroscopy. Angewandte Chemie International Edition. Wiley. https://doi.org/10.1002/anie.200904411","ama":"Schanda P, Huber M, Verel R, Ernst M, Meier B. Direct detection of 3hJN’ hydrogen-bond scalar couplings in proteins by solid-state NMR spectroscopy. Angewandte Chemie International Edition. 2009;48(49):9322-9325. doi:10.1002/anie.200904411","ieee":"P. Schanda, M. Huber, R. Verel, M. Ernst, and B. Meier, “Direct detection of 3hJN’ hydrogen-bond scalar couplings in proteins by solid-state NMR spectroscopy,” Angewandte Chemie International Edition, vol. 48, no. 49. Wiley, pp. 9322–9325, 2009.","mla":"Schanda, Paul, et al. “Direct Detection of 3hJN’ Hydrogen-Bond Scalar Couplings in Proteins by Solid-State NMR Spectroscopy.” Angewandte Chemie International Edition, vol. 48, no. 49, Wiley, 2009, pp. 9322–25, doi:10.1002/anie.200904411.","short":"P. Schanda, M. Huber, R. Verel, M. Ernst, B. Meier, Angewandte Chemie International Edition 48 (2009) 9322–9325."},"oa_version":"None","keyword":["General Chemistry","Catalysis"],"language":[{"iso":"eng"}],"type":"journal_article","month":"11","article_type":"original","publication_identifier":{"issn":["1433-7851","1521-3773"]},"year":"2009","volume":48},{"day":"01","page":"238-265","title":"Fast-pulsing longitudinal relaxation optimized techniques: Enriching the toolbox of fast biomolecular NMR spectroscopy","publication":"Progress in Nuclear Magnetic Resonance Spectroscopy","status":"public","date_updated":"2021-01-12T08:19:32Z","date_created":"2020-09-18T10:11:42Z","issue":"3","date_published":"2009-10-01T00:00:00Z","language":[{"iso":"eng"}],"citation":{"chicago":"Schanda, Paul. “Fast-Pulsing Longitudinal Relaxation Optimized Techniques: Enriching the Toolbox of Fast Biomolecular NMR Spectroscopy.” Progress in Nuclear Magnetic Resonance Spectroscopy. Elsevier, 2009. https://doi.org/10.1016/j.pnmrs.2009.05.002.","ista":"Schanda P. 2009. Fast-pulsing longitudinal relaxation optimized techniques: Enriching the toolbox of fast biomolecular NMR spectroscopy. Progress in Nuclear Magnetic Resonance Spectroscopy. 55(3), 238–265.","mla":"Schanda, Paul. “Fast-Pulsing Longitudinal Relaxation Optimized Techniques: Enriching the Toolbox of Fast Biomolecular NMR Spectroscopy.” Progress in Nuclear Magnetic Resonance Spectroscopy, vol. 55, no. 3, Elsevier, 2009, pp. 238–65, doi:10.1016/j.pnmrs.2009.05.002.","ieee":"P. Schanda, “Fast-pulsing longitudinal relaxation optimized techniques: Enriching the toolbox of fast biomolecular NMR spectroscopy,” Progress in Nuclear Magnetic Resonance Spectroscopy, vol. 55, no. 3. Elsevier, pp. 238–265, 2009.","short":"P. Schanda, Progress in Nuclear Magnetic Resonance Spectroscopy 55 (2009) 238–265.","apa":"Schanda, P. (2009). Fast-pulsing longitudinal relaxation optimized techniques: Enriching the toolbox of fast biomolecular NMR spectroscopy. Progress in Nuclear Magnetic Resonance Spectroscopy. Elsevier. https://doi.org/10.1016/j.pnmrs.2009.05.002","ama":"Schanda P. Fast-pulsing longitudinal relaxation optimized techniques: Enriching the toolbox of fast biomolecular NMR spectroscopy. Progress in Nuclear Magnetic Resonance Spectroscopy. 2009;55(3):238-265. doi:10.1016/j.pnmrs.2009.05.002"},"oa_version":"None","volume":55,"year":"2009","article_type":"original","month":"10","publication_identifier":{"issn":["0079-6565"]},"type":"journal_article","doi":"10.1016/j.pnmrs.2009.05.002","publisher":"Elsevier","publication_status":"published","author":[{"full_name":"Schanda, Paul","orcid":"0000-0002-9350-7606","id":"7B541462-FAF6-11E9-A490-E8DFE5697425","first_name":"Paul","last_name":"Schanda"}],"extern":"1","intvolume":" 55","_id":"8475","article_processing_charge":"No","quality_controlled":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87"},{"publisher":"American Chemical Society","doi":"10.1021/ja901633y","author":[{"full_name":"Farjon, Jonathan","last_name":"Farjon","first_name":"Jonathan"},{"first_name":"Jérôme","last_name":"Boisbouvier","full_name":"Boisbouvier, Jérôme"},{"full_name":"Schanda, Paul","orcid":"0000-0002-9350-7606","id":"7B541462-FAF6-11E9-A490-E8DFE5697425","first_name":"Paul","last_name":"Schanda"},{"last_name":"Pardi","first_name":"Arthur","full_name":"Pardi, Arthur"},{"last_name":"Simorre","first_name":"Jean-Pierre","full_name":"Simorre, Jean-Pierre"},{"last_name":"Brutscher","first_name":"Bernhard","full_name":"Brutscher, Bernhard"}],"publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","_id":"8476","quality_controlled":"1","intvolume":" 131","extern":"1","publication":"Journal of the American Chemical Society","title":"Longitudinal-relaxation-enhanced NMR experiments for the study of nucleic acids in solution","page":"8571-8577","day":"01","abstract":[{"lang":"eng","text":"Atomic-resolution information on the structure and dynamics of nucleic acids is essential for a better understanding of the mechanistic basis of many cellular processes. NMR spectroscopy is a powerful method for studying the structure and dynamics of nucleic acids; however, solution NMR studies are currently limited to relatively small nucleic acids at high concentrations. Thus, technological and methodological improvements that increase the experimental sensitivity and spectral resolution of NMR spectroscopy are required for studies of larger nucleic acids or protein−nucleic acid complexes. Here we introduce a series of imino-proton-detected NMR experiments that yield an over 2-fold increase in sensitivity compared to conventional pulse schemes. These methods can be applied to the detection of base pair interactions, RNA−ligand titration experiments, measurement of residual dipolar 15N−1H couplings, and direct measurements of conformational transitions. These NMR experiments employ longitudinal spin relaxation enhancement techniques that have proven useful in protein NMR spectroscopy. The performance of these new experiments is demonstrated for a 10 kDa TAR-TAR*GA RNA kissing complex and a 26 kDa tRNA."}],"date_published":"2009-06-01T00:00:00Z","issue":"24","date_created":"2020-09-18T10:11:49Z","status":"public","date_updated":"2021-01-12T08:19:32Z","citation":{"short":"J. Farjon, J. Boisbouvier, P. Schanda, A. Pardi, J.-P. Simorre, B. Brutscher, Journal of the American Chemical Society 131 (2009) 8571–8577.","mla":"Farjon, Jonathan, et al. “Longitudinal-Relaxation-Enhanced NMR Experiments for the Study of Nucleic Acids in Solution.” Journal of the American Chemical Society, vol. 131, no. 24, American Chemical Society, 2009, pp. 8571–77, doi:10.1021/ja901633y.","ieee":"J. Farjon, J. Boisbouvier, P. Schanda, A. Pardi, J.-P. Simorre, and B. Brutscher, “Longitudinal-relaxation-enhanced NMR experiments for the study of nucleic acids in solution,” Journal of the American Chemical Society, vol. 131, no. 24. American Chemical Society, pp. 8571–8577, 2009.","ama":"Farjon J, Boisbouvier J, Schanda P, Pardi A, Simorre J-P, Brutscher B. Longitudinal-relaxation-enhanced NMR experiments for the study of nucleic acids in solution. Journal of the American Chemical Society. 2009;131(24):8571-8577. doi:10.1021/ja901633y","apa":"Farjon, J., Boisbouvier, J., Schanda, P., Pardi, A., Simorre, J.-P., & Brutscher, B. (2009). Longitudinal-relaxation-enhanced NMR experiments for the study of nucleic acids in solution. Journal of the American Chemical Society. American Chemical Society. https://doi.org/10.1021/ja901633y","chicago":"Farjon, Jonathan, Jérôme Boisbouvier, Paul Schanda, Arthur Pardi, Jean-Pierre Simorre, and Bernhard Brutscher. “Longitudinal-Relaxation-Enhanced NMR Experiments for the Study of Nucleic Acids in Solution.” Journal of the American Chemical Society. American Chemical Society, 2009. https://doi.org/10.1021/ja901633y.","ista":"Farjon J, Boisbouvier J, Schanda P, Pardi A, Simorre J-P, Brutscher B. 2009. Longitudinal-relaxation-enhanced NMR experiments for the study of nucleic acids in solution. Journal of the American Chemical Society. 131(24), 8571–8577."},"oa_version":"None","language":[{"iso":"eng"}],"type":"journal_article","article_type":"original","month":"06","publication_identifier":{"issn":["0002-7863","1520-5126"]},"volume":131,"year":"2009"},{"doi":"10.1021/ja809880p","publisher":"American Chemical Society","author":[{"full_name":"Amero, Carlos","first_name":"Carlos","last_name":"Amero"},{"first_name":"Paul","last_name":"Schanda","orcid":"0000-0002-9350-7606","full_name":"Schanda, Paul","id":"7B541462-FAF6-11E9-A490-E8DFE5697425"},{"last_name":"Durá","first_name":"M. Asunción","full_name":"Durá, M. Asunción"},{"full_name":"Ayala, Isabel","first_name":"Isabel","last_name":"Ayala"},{"full_name":"Marion, Dominique","last_name":"Marion","first_name":"Dominique"},{"full_name":"Franzetti, Bruno","first_name":"Bruno","last_name":"Franzetti"},{"full_name":"Brutscher, Bernhard","first_name":"Bernhard","last_name":"Brutscher"},{"full_name":"Boisbouvier, Jérôme","last_name":"Boisbouvier","first_name":"Jérôme"}],"publication_status":"published","extern":"1","intvolume":" 131","quality_controlled":"1","_id":"8477","article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","abstract":[{"text":"An optimized NMR experiment that combines the advantages of methyl-TROSY and SOFAST-HMQC has been developed. It allows the recording of high quality methyl 1H−13C correlation spectra of protein assemblies of several hundreds of kDa in a few seconds. The SOFAST-methyl-TROSY-based experiment offers completely new opportunities for the study of structural and dynamic changes occurring in molecular nanomachines while they perform their biological function in vitro.","lang":"eng"}],"day":"25","page":"3448-3449","title":"Fast two-dimensional NMR spectroscopy of high molecular weight protein assemblies","publication":"Journal of the American Chemical Society","status":"public","date_updated":"2021-01-12T08:19:32Z","issue":"10","date_created":"2020-09-18T10:12:01Z","date_published":"2009-02-25T00:00:00Z","language":[{"iso":"eng"}],"oa_version":"None","citation":{"ieee":"C. Amero et al., “Fast two-dimensional NMR spectroscopy of high molecular weight protein assemblies,” Journal of the American Chemical Society, vol. 131, no. 10. American Chemical Society, pp. 3448–3449, 2009.","mla":"Amero, Carlos, et al. “Fast Two-Dimensional NMR Spectroscopy of High Molecular Weight Protein Assemblies.” Journal of the American Chemical Society, vol. 131, no. 10, American Chemical Society, 2009, pp. 3448–49, doi:10.1021/ja809880p.","short":"C. Amero, P. Schanda, M.A. Durá, I. Ayala, D. Marion, B. Franzetti, B. Brutscher, J. Boisbouvier, Journal of the American Chemical Society 131 (2009) 3448–3449.","ama":"Amero C, Schanda P, Durá MA, et al. Fast two-dimensional NMR spectroscopy of high molecular weight protein assemblies. Journal of the American Chemical Society. 2009;131(10):3448-3449. doi:10.1021/ja809880p","apa":"Amero, C., Schanda, P., Durá, M. A., Ayala, I., Marion, D., Franzetti, B., … Boisbouvier, J. (2009). Fast two-dimensional NMR spectroscopy of high molecular weight protein assemblies. Journal of the American Chemical Society. American Chemical Society. https://doi.org/10.1021/ja809880p","chicago":"Amero, Carlos, Paul Schanda, M. Asunción Durá, Isabel Ayala, Dominique Marion, Bruno Franzetti, Bernhard Brutscher, and Jérôme Boisbouvier. “Fast Two-Dimensional NMR Spectroscopy of High Molecular Weight Protein Assemblies.” Journal of the American Chemical Society. American Chemical Society, 2009. https://doi.org/10.1021/ja809880p.","ista":"Amero C, Schanda P, Durá MA, Ayala I, Marion D, Franzetti B, Brutscher B, Boisbouvier J. 2009. Fast two-dimensional NMR spectroscopy of high molecular weight protein assemblies. Journal of the American Chemical Society. 131(10), 3448–3449."},"year":"2009","volume":131,"month":"02","article_type":"original","publication_identifier":{"issn":["0002-7863","1520-5126"]},"type":"journal_article"},{"extern":"1","intvolume":" 131","article_processing_charge":"No","_id":"8478","quality_controlled":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"full_name":"Brüschweiler, Sven","first_name":"Sven","last_name":"Brüschweiler"},{"last_name":"Schanda","first_name":"Paul","id":"7B541462-FAF6-11E9-A490-E8DFE5697425","orcid":"0000-0002-9350-7606","full_name":"Schanda, Paul"},{"last_name":"Kloiber","first_name":"Karin","full_name":"Kloiber, Karin"},{"full_name":"Brutscher, Bernhard","first_name":"Bernhard","last_name":"Brutscher"},{"full_name":"Kontaxis, Georg","last_name":"Kontaxis","first_name":"Georg"},{"full_name":"Konrat, Robert","first_name":"Robert","last_name":"Konrat"},{"full_name":"Tollinger, Martin","first_name":"Martin","last_name":"Tollinger"}],"publication_status":"published","doi":"10.1021/ja809947w","publisher":"American Chemical Society","year":"2009","volume":131,"publication_identifier":{"issn":["0002-7863","1520-5126"]},"article_type":"original","month":"02","type":"journal_article","language":[{"iso":"eng"}],"oa_version":"None","citation":{"mla":"Brüschweiler, Sven, et al. “Direct Observation of the Dynamic Process Underlying Allosteric Signal Transmission.” Journal of the American Chemical Society, vol. 131, no. 8, American Chemical Society, 2009, pp. 3063–68, doi:10.1021/ja809947w.","ieee":"S. Brüschweiler et al., “Direct observation of the dynamic process underlying allosteric signal transmission,” Journal of the American Chemical Society, vol. 131, no. 8. American Chemical Society, pp. 3063–3068, 2009.","short":"S. Brüschweiler, P. Schanda, K. Kloiber, B. Brutscher, G. Kontaxis, R. Konrat, M. Tollinger, Journal of the American Chemical Society 131 (2009) 3063–3068.","apa":"Brüschweiler, S., Schanda, P., Kloiber, K., Brutscher, B., Kontaxis, G., Konrat, R., & Tollinger, M. (2009). Direct observation of the dynamic process underlying allosteric signal transmission. Journal of the American Chemical Society. American Chemical Society. https://doi.org/10.1021/ja809947w","ama":"Brüschweiler S, Schanda P, Kloiber K, et al. Direct observation of the dynamic process underlying allosteric signal transmission. Journal of the American Chemical Society. 2009;131(8):3063-3068. doi:10.1021/ja809947w","chicago":"Brüschweiler, Sven, Paul Schanda, Karin Kloiber, Bernhard Brutscher, Georg Kontaxis, Robert Konrat, and Martin Tollinger. “Direct Observation of the Dynamic Process Underlying Allosteric Signal Transmission.” Journal of the American Chemical Society. American Chemical Society, 2009. https://doi.org/10.1021/ja809947w.","ista":"Brüschweiler S, Schanda P, Kloiber K, Brutscher B, Kontaxis G, Konrat R, Tollinger M. 2009. Direct observation of the dynamic process underlying allosteric signal transmission. Journal of the American Chemical Society. 131(8), 3063–3068."},"status":"public","date_updated":"2021-01-12T08:19:33Z","date_created":"2020-09-18T10:12:14Z","issue":"8","date_published":"2009-02-09T00:00:00Z","abstract":[{"text":"Allosteric regulation is an effective mechanism of control in biological processes. In allosteric proteins a signal originating at one site in the molecule is communicated through the protein structure to trigger a specific response at a remote site. Using NMR relaxation dispersion techniques we directly observe the dynamic process through which the KIX domain of CREB binding protein communicates allosteric information between binding sites. KIX mediates cooperativity between pairs of transcription factors through binding to two distinct interaction surfaces in an allosteric manner. We show that binding the activation domain of the mixed lineage leukemia (MLL) transcription factor to KIX induces a redistribution of the relative populations of KIX conformations toward a high-energy state in which the allosterically activated second binding site is already preformed, consistent with the Monod−Wyman−Changeux (WMC) model of allostery. The structural rearrangement process that links the two conformers and by which allosteric information is communicated occurs with a time constant of 3 ms at 27 °C. Our dynamic NMR data reveal that an evolutionarily conserved network of hydrophobic amino acids constitutes the pathway through which information is transmitted.","lang":"eng"}],"day":"09","page":"3063-3068","title":"Direct observation of the dynamic process underlying allosteric signal transmission","publication":"Journal of the American Chemical Society"},{"author":[{"full_name":"Gal, Maayan","first_name":"Maayan","last_name":"Gal"},{"full_name":"Kern, Thomas","first_name":"Thomas","last_name":"Kern"},{"full_name":"Schanda, Paul","orcid":"0000-0002-9350-7606","id":"7B541462-FAF6-11E9-A490-E8DFE5697425","first_name":"Paul","last_name":"Schanda"},{"full_name":"Frydman, Lucio","last_name":"Frydman","first_name":"Lucio"},{"first_name":"Bernhard","last_name":"Brutscher","full_name":"Brutscher, Bernhard"}],"publication_status":"published","doi":"10.1007/s10858-008-9284-9","publisher":"Springer Nature","extern":"1","intvolume":" 43","_id":"8479","article_processing_charge":"No","quality_controlled":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_updated":"2021-01-12T08:19:33Z","status":"public","date_created":"2020-09-18T10:12:20Z","date_published":"2009-01-01T00:00:00Z","abstract":[{"lang":"eng","text":"Multidimensional NMR spectroscopy is a well-established technique for the characterization of structure and fast-time-scale dynamics of highly populated ground states of biological macromolecules. The investigation of short-lived excited states that are important for molecular folding, misfolding and function, however, remains a challenge for modern biomolecular NMR techniques. Off-equilibrium real-time kinetic NMR methods allow direct observation of conformational or chemical changes by following peak positions and intensities in a series of spectra recorded during a kinetic event. Because standard multidimensional NMR methods required to yield sufficient atom-resolution are intrinsically time-consuming, many interesting phenomena are excluded from real-time NMR analysis. Recently, spatially encoded ultrafast 2D NMR techniques have been proposed that allow one to acquire a 2D NMR experiment within a single transient. In addition, when combined with the SOFAST technique, such ultrafast experiments can be repeated at high rates. One of the problems detected for such ultrafast protein NMR experiments is related to the heteronuclear decoupling during detection with interferences between the pulses and the oscillatory magnetic field gradients arising in this scheme. Here we present a method for improved ultrafast data acquisition yielding higher signal to noise and sharper lines in single-scan 2D NMR spectra. In combination with a fast-mixing device, the recording of 1H–15N correlation spectra with repetition rates of up to a few Hertz becomes feasible, enabling real-time studies of protein kinetics occurring on time scales down to a few seconds."}],"day":"01","page":"1-10","publication":"Journal of Biomolecular NMR","title":"An improved ultrafast 2D NMR experiment: Towards atom-resolved real-time studies of protein kinetics at multi-Hz rates","volume":43,"year":"2009","month":"01","article_type":"original","publication_identifier":{"issn":["0925-2738","1573-5001"]},"type":"journal_article","language":[{"iso":"eng"}],"keyword":["Spectroscopy","Biochemistry"],"citation":{"chicago":"Gal, Maayan, Thomas Kern, Paul Schanda, Lucio Frydman, and Bernhard Brutscher. “An Improved Ultrafast 2D NMR Experiment: Towards Atom-Resolved Real-Time Studies of Protein Kinetics at Multi-Hz Rates.” Journal of Biomolecular NMR. Springer Nature, 2009. https://doi.org/10.1007/s10858-008-9284-9.","ista":"Gal M, Kern T, Schanda P, Frydman L, Brutscher B. 2009. An improved ultrafast 2D NMR experiment: Towards atom-resolved real-time studies of protein kinetics at multi-Hz rates. Journal of Biomolecular NMR. 43, 1–10.","mla":"Gal, Maayan, et al. “An Improved Ultrafast 2D NMR Experiment: Towards Atom-Resolved Real-Time Studies of Protein Kinetics at Multi-Hz Rates.” Journal of Biomolecular NMR, vol. 43, Springer Nature, 2009, pp. 1–10, doi:10.1007/s10858-008-9284-9.","ieee":"M. Gal, T. Kern, P. Schanda, L. Frydman, and B. Brutscher, “An improved ultrafast 2D NMR experiment: Towards atom-resolved real-time studies of protein kinetics at multi-Hz rates,” Journal of Biomolecular NMR, vol. 43. Springer Nature, pp. 1–10, 2009.","short":"M. Gal, T. Kern, P. Schanda, L. Frydman, B. Brutscher, Journal of Biomolecular NMR 43 (2009) 1–10.","apa":"Gal, M., Kern, T., Schanda, P., Frydman, L., & Brutscher, B. (2009). An improved ultrafast 2D NMR experiment: Towards atom-resolved real-time studies of protein kinetics at multi-Hz rates. Journal of Biomolecular NMR. Springer Nature. https://doi.org/10.1007/s10858-008-9284-9","ama":"Gal M, Kern T, Schanda P, Frydman L, Brutscher B. An improved ultrafast 2D NMR experiment: Towards atom-resolved real-time studies of protein kinetics at multi-Hz rates. Journal of Biomolecular NMR. 2009;43:1-10. doi:10.1007/s10858-008-9284-9"},"oa_version":"None"},{"day":"01","abstract":[{"text":"We study generic unfoldings of homoclinic tangencies of two-dimensional area-preserving diffeomorphisms (conservative New house phenomena) and show that they give rise to invariant hyperbolic sets of arbitrarily large Hausdorff dimension. As applications, we discuss the size of the stochastic layer of a standard map and the Hausdorff dimension of invariant hyperbolic sets for certain restricted three-body problems. We avoid involved technical details and only concentrate on the ideas of the proof of the presented results.","lang":"eng"}],"title":"Conservative homoclinic bifurcations and some applications","publication":"Proceedings of the Steklov Institute of Mathematics","page":"76-90","status":"public","date_updated":"2021-01-12T08:19:46Z","date_published":"2009-12-01T00:00:00Z","issue":"1","date_created":"2020-09-18T10:48:03Z","language":[{"iso":"eng"}],"oa_version":"None","citation":{"ieee":"A. Gorodetski and V. Kaloshin, “Conservative homoclinic bifurcations and some applications,” Proceedings of the Steklov Institute of Mathematics, vol. 267, no. 1. Springer Nature, pp. 76–90, 2009.","mla":"Gorodetski, Anton, and Vadim Kaloshin. “Conservative Homoclinic Bifurcations and Some Applications.” Proceedings of the Steklov Institute of Mathematics, vol. 267, no. 1, Springer Nature, 2009, pp. 76–90, doi:10.1134/s0081543809040063.","short":"A. Gorodetski, V. Kaloshin, Proceedings of the Steklov Institute of Mathematics 267 (2009) 76–90.","apa":"Gorodetski, A., & Kaloshin, V. (2009). Conservative homoclinic bifurcations and some applications. Proceedings of the Steklov Institute of Mathematics. Springer Nature. https://doi.org/10.1134/s0081543809040063","ama":"Gorodetski A, Kaloshin V. Conservative homoclinic bifurcations and some applications. Proceedings of the Steklov Institute of Mathematics. 2009;267(1):76-90. doi:10.1134/s0081543809040063","chicago":"Gorodetski, Anton, and Vadim Kaloshin. “Conservative Homoclinic Bifurcations and Some Applications.” Proceedings of the Steklov Institute of Mathematics. Springer Nature, 2009. https://doi.org/10.1134/s0081543809040063.","ista":"Gorodetski A, Kaloshin V. 2009. Conservative homoclinic bifurcations and some applications. Proceedings of the Steklov Institute of Mathematics. 267(1), 76–90."},"keyword":["Mathematics (miscellaneous)"],"year":"2009","volume":267,"type":"journal_article","month":"12","article_type":"original","publication_identifier":{"issn":["0081-5438","1531-8605"]},"doi":"10.1134/s0081543809040063","publisher":"Springer Nature","publication_status":"published","author":[{"last_name":"Gorodetski","first_name":"Anton","full_name":"Gorodetski, Anton"},{"first_name":"Vadim","last_name":"Kaloshin","orcid":"0000-0002-6051-2628","full_name":"Kaloshin, Vadim","id":"FE553552-CDE8-11E9-B324-C0EBE5697425"}],"intvolume":" 267","extern":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"8508","quality_controlled":"1","article_processing_charge":"No"},{"day":"25","publication":"Review of Scientific Instruments","status":"public","date_created":"2018-12-11T11:44:34Z","language":[{"iso":"eng"}],"month":"06","publist_id":"7966","external_id":{"pmid":[" 19566203"]},"oa":1,"intvolume":" 80","acknowledgement":"This work was supported by the National Science Foundation under Grant Nos. PHY-0456898, PHY-0757989, and PHY-0456870 and the National Nuclear Security Administration under Cooperative Agreement No. DE-FC52-03NA00156. Acknowledgment is made to the Donors of the Petroleum Research Fund administered by the American Chemical Society for partial support of this research.","quality_controlled":"1","abstract":[{"text":"We have developed a tunable source of Mie scale microdroplet aerosols that can be used for the generation of energetic ions. To demonstrate this potential, a terawatt Ti: Al2 O3 laser focused to 2×10 19 W/cm2 was used to irradiate heavy water (D2 O) aerosols composed of micron-scale droplets. Energetic deuterium ions, which were generated in the laser-droplet interaction, produced deuterium-deuterium fusion with approximately 2×10^3 fusion neutrons measured per joule of incident laser energy. ","lang":"eng"}],"title":"Generation of Mie size microdroplet aerosols with applications in laser-driven fusion experiments","article_number":"063503","date_updated":"2021-01-12T08:21:06Z","date_published":"2009-06-25T00:00:00Z","main_file_link":[{"open_access":"1","url":"https://www.osti.gov/biblio/22053583"}],"issue":"6","oa_version":"Submitted Version","citation":{"apa":"Higginbotham, A. P., Semonin, O., Bruce, S., Chan, C., Maindi, M., Donnelly, T., … Ditmire, T. (2009). Generation of Mie size microdroplet aerosols with applications in laser-driven fusion experiments. Review of Scientific Instruments. American Institute of Physics. https://doi.org/10.1063/1.3155302","ama":"Higginbotham AP, Semonin O, Bruce S, et al. Generation of Mie size microdroplet aerosols with applications in laser-driven fusion experiments. Review of Scientific Instruments. 2009;80(6). doi:10.1063/1.3155302","mla":"Higginbotham, Andrew P., et al. “Generation of Mie Size Microdroplet Aerosols with Applications in Laser-Driven Fusion Experiments.” Review of Scientific Instruments, vol. 80, no. 6, 063503, American Institute of Physics, 2009, doi:10.1063/1.3155302.","ieee":"A. P. Higginbotham et al., “Generation of Mie size microdroplet aerosols with applications in laser-driven fusion experiments,” Review of Scientific Instruments, vol. 80, no. 6. American Institute of Physics, 2009.","short":"A.P. Higginbotham, O. Semonin, S. Bruce, C. Chan, M. Maindi, T. Donnelly, M. Maurer, W. Bang, I.. Churina, J. Osterholz, I. Kim, A. Bernstein, T. Ditmire, Review of Scientific Instruments 80 (2009).","ista":"Higginbotham AP, Semonin O, Bruce S, Chan C, Maindi M, Donnelly T, Maurer M, Bang W, Churina I., Osterholz J, Kim I, Bernstein A, Ditmire T. 2009. Generation of Mie size microdroplet aerosols with applications in laser-driven fusion experiments. Review of Scientific Instruments. 80(6), 063503.","chicago":"Higginbotham, Andrew P, Octavi Semonin, S Bruce, C Chan, M Maindi, Tom Donnelly, M Maurer, et al. “Generation of Mie Size Microdroplet Aerosols with Applications in Laser-Driven Fusion Experiments.” Review of Scientific Instruments. American Institute of Physics, 2009. https://doi.org/10.1063/1.3155302."},"year":"2009","volume":80,"type":"journal_article","doi":"10.1063/1.3155302","publisher":"American Institute of Physics","author":[{"id":"4AD6785A-F248-11E8-B48F-1D18A9856A87","full_name":"Higginbotham, Andrew P","orcid":"0000-0003-2607-2363","last_name":"Higginbotham","first_name":"Andrew P"},{"first_name":"Octavi","last_name":"Semonin","full_name":"Semonin, Octavi"},{"full_name":"Bruce, S","last_name":"Bruce","first_name":"S"},{"full_name":"Chan, C","last_name":"Chan","first_name":"C"},{"full_name":"Maindi, M","first_name":"M","last_name":"Maindi"},{"first_name":"Tom","last_name":"Donnelly","full_name":"Donnelly, Tom"},{"full_name":"Maurer, M","last_name":"Maurer","first_name":"M"},{"last_name":"Bang","first_name":"Woosuk","full_name":"Bang, Woosuk"},{"last_name":"Churina","first_name":"I.V","full_name":"Churina, I.V"},{"last_name":"Osterholz","first_name":"Jens","full_name":"Osterholz, Jens"},{"full_name":"Kim, I","first_name":"I","last_name":"Kim"},{"last_name":"Bernstein","first_name":"Aaron","full_name":"Bernstein, Aaron"},{"full_name":"Ditmire, Todd","first_name":"Todd","last_name":"Ditmire"}],"publication_status":"published","extern":"1","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","_id":"88","pmid":1},{"citation":{"chicago":"Alkalaeva, Elena, Boris Eliseev, Alexandre Ambrogelly, Peter Vlasov, Fyodor Kondrashov, Sarath Gundllapalli, Ludmila Frolova, Dieter Söll, and Lev Kisselev. “Translation Termination in Pyrrolysine-Utilizing Archaea.” FEBS Letters. Elsevier, 2009. https://doi.org/10.1016/j.febslet.2009.09.044.","ista":"Alkalaeva E, Eliseev B, Ambrogelly A, Vlasov P, Kondrashov F, Gundllapalli S, Frolova L, Söll D, Kisselev L. 2009. Translation termination in pyrrolysine-utilizing archaea. FEBS Letters. 583(21), 3455–3460.","mla":"Alkalaeva, Elena, et al. “Translation Termination in Pyrrolysine-Utilizing Archaea.” FEBS Letters, vol. 583, no. 21, Elsevier, 2009, pp. 3455–60, doi:10.1016/j.febslet.2009.09.044.","ieee":"E. Alkalaeva et al., “Translation termination in pyrrolysine-utilizing archaea,” FEBS Letters, vol. 583, no. 21. Elsevier, pp. 3455–3460, 2009.","short":"E. Alkalaeva, B. Eliseev, A. Ambrogelly, P. Vlasov, F. Kondrashov, S. Gundllapalli, L. Frolova, D. Söll, L. Kisselev, FEBS Letters 583 (2009) 3455–3460.","apa":"Alkalaeva, E., Eliseev, B., Ambrogelly, A., Vlasov, P., Kondrashov, F., Gundllapalli, S., … Kisselev, L. (2009). Translation termination in pyrrolysine-utilizing archaea. FEBS Letters. Elsevier. https://doi.org/10.1016/j.febslet.2009.09.044","ama":"Alkalaeva E, Eliseev B, Ambrogelly A, et al. Translation termination in pyrrolysine-utilizing archaea. FEBS Letters. 2009;583(21):3455-3460. doi:10.1016/j.febslet.2009.09.044"},"month":"11","type":"journal_article","volume":583,"year":"2009","page":"3455 - 3460","title":"Translation termination in pyrrolysine-utilizing archaea","publication":"FEBS Letters","abstract":[{"text":"Although some data link archaeal and eukaryotic translation, the overall mechanism of protein synthesis in archaea remains largely obscure. Both archaeal (aRF1) and eukaryotic (eRF1) single release factors recognize all three stop codons. The archaeal genus Methanosarcinaceae contains two aRF1 homologs, and also uses the UAG stop to encode the 22nd amino acid, pyrrolysine. Here we provide an analysis of the last stage of archaeal translation in pyrrolysine-utilizing species. We demonstrated that only one of two Methanosarcina barkeri aRF1 homologs possesses activity and recognizes all three stop codons. The second aRF1 homolog may have another unknown function. The mechanism of pyrrolysine incorporation in the Methanosarcinaceae is discussed.","lang":"eng"}],"day":"03","date_created":"2018-12-11T11:49:08Z","issue":"21","date_published":"2009-11-03T00:00:00Z","status":"public","date_updated":"2021-01-12T08:21:49Z","quality_controlled":0,"_id":"908","acknowledgement":"We are grateful to Andrey Poltaraus and his colleagues for sequencing a/eRF1 genes. We thank Tatyana Pestova and Chris Hellen for the gift of plasmids encoding initiation factors eIF1, eIF1A, eIF4A, eIF4B, eIF4G, eIF5, eIF5B, and Anna Yaremchuk and Michael Tukalo for M. jannaschii aRF1. This work was supported by grants from the Presidium of the (Program Molecular and Cell Biology), the Russian Foundation for Basic Research (08-04-01091-а to E.A. and 08-04-00375a to L.F.), the National Institute for General Medical Sciences (to D.S.), the National Science Foundation (to D.S.) and the Office of Basic Energy Sciences, DOE (to D.S.).","extern":1,"intvolume":" 583","publisher":"Elsevier","publist_id":"6740","doi":"10.1016/j.febslet.2009.09.044","publication_status":"published","author":[{"full_name":"Alkalaeva, Elena Z","last_name":"Alkalaeva","first_name":"Elena"},{"first_name":"Boris","last_name":"Eliseev","full_name":"Eliseev, Boris D"},{"full_name":"Ambrogelly, Alexandre","last_name":"Ambrogelly","first_name":"Alexandre"},{"full_name":"Vlasov, Peter K","first_name":"Peter","last_name":"Vlasov"},{"first_name":"Fyodor","last_name":"Kondrashov","orcid":"0000-0001-8243-4694","full_name":"Fyodor Kondrashov","id":"44FDEF62-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Sarath","last_name":"Gundllapalli","full_name":"Gundllapalli, Sarath B"},{"last_name":"Frolova","first_name":"Ludmila","full_name":"Frolova, Ludmila Y"},{"full_name":"Söll, Dieter G","first_name":"Dieter","last_name":"Söll"},{"full_name":"Kisselev, Lev L","last_name":"Kisselev","first_name":"Lev"}]},{"article_processing_charge":"No","quality_controlled":"1","intvolume":" 39","oa":1,"language":[{"iso":"eng"}],"month":"09","article_type":"original","page":"2077-2096","publication":"Journal of Physical Oceanography","day":"01","date_created":"2021-02-15T14:41:08Z","status":"public","_id":"9147","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","extern":"1","publisher":"American Meteorological Society","doi":"10.1175/2009jpo4141.1","author":[{"last_name":"Muller","first_name":"Caroline J","id":"f978ccb0-3f7f-11eb-b193-b0e2bd13182b","full_name":"Muller, Caroline J","orcid":"0000-0001-5836-5350"},{"full_name":"Bühler, Oliver","first_name":"Oliver","last_name":"Bühler"}],"publication_status":"published","citation":{"ista":"Muller CJ, Bühler O. 2009. Saturation of the internal tides and induced mixing in the abyssal ocean. Journal of Physical Oceanography. 39(9), 2077–2096.","chicago":"Muller, Caroline J, and Oliver Bühler. “Saturation of the Internal Tides and Induced Mixing in the Abyssal Ocean.” Journal of Physical Oceanography. American Meteorological Society, 2009. https://doi.org/10.1175/2009jpo4141.1.","apa":"Muller, C. J., & Bühler, O. (2009). Saturation of the internal tides and induced mixing in the abyssal ocean. Journal of Physical Oceanography. American Meteorological Society. https://doi.org/10.1175/2009jpo4141.1","ama":"Muller CJ, Bühler O. Saturation of the internal tides and induced mixing in the abyssal ocean. Journal of Physical Oceanography. 2009;39(9):2077-2096. doi:10.1175/2009jpo4141.1","short":"C.J. Muller, O. Bühler, Journal of Physical Oceanography 39 (2009) 2077–2096.","ieee":"C. J. Muller and O. Bühler, “Saturation of the internal tides and induced mixing in the abyssal ocean,” Journal of Physical Oceanography, vol. 39, no. 9. American Meteorological Society, pp. 2077–2096, 2009.","mla":"Muller, Caroline J., and Oliver Bühler. “Saturation of the Internal Tides and Induced Mixing in the Abyssal Ocean.” Journal of Physical Oceanography, vol. 39, no. 9, American Meteorological Society, 2009, pp. 2077–96, doi:10.1175/2009jpo4141.1."},"keyword":["Oceanography"],"oa_version":"Published Version","publication_identifier":{"issn":["1520-0485","0022-3670"]},"type":"journal_article","year":"2009","volume":39,"title":"Saturation of the internal tides and induced mixing in the abyssal ocean","abstract":[{"text":"As part of an ongoing effort to develop a parameterization of wave-induced abyssal mixing, the authors derive an heuristic model for nonlinear wave breaking and energy dissipation associated with internal tides. Then the saturation and dissipation of internal tides for idealized and observed topography samples are investigated. One of the main results is that the wave-induced mixing could be more intense and more confined to the bottom than previously assumed in numerical models. Furthermore, in this model wave breaking and mixing clearly depend on the small scales of the topography below 10 km or so, which is below the current resolution of global bathymetry. This motivates the use of a statistical approach to represent the unresolved topography when addressing the role of internal tides in mixing the deep ocean.","lang":"eng"}],"issue":"9","date_published":"2009-09-01T00:00:00Z","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1175/2009JPO4141.1"}],"date_updated":"2022-01-24T13:50:37Z"},{"volume":36,"year":"2009","publication_identifier":{"issn":["0094-8276"]},"type":"journal_article","keyword":["General Earth and Planetary Sciences","Geophysics"],"oa_version":"Published Version","citation":{"short":"C.J. Muller, L.E. Back, P.A. O’Gorman, K.A. Emanuel, Geophysical Research Letters 36 (2009).","ieee":"C. J. Muller, L. E. Back, P. A. O’Gorman, and K. A. Emanuel, “A model for the relationship between tropical precipitation and column water vapor,” Geophysical Research Letters, vol. 36, no. 16. American Geophysical Union, 2009.","mla":"Muller, Caroline J., et al. “A Model for the Relationship between Tropical Precipitation and Column Water Vapor.” Geophysical Research Letters, vol. 36, no. 16, L16804, American Geophysical Union, 2009, doi:10.1029/2009gl039667.","apa":"Muller, C. J., Back, L. E., O’Gorman, P. A., & Emanuel, K. A. (2009). A model for the relationship between tropical precipitation and column water vapor. Geophysical Research Letters. American Geophysical Union. https://doi.org/10.1029/2009gl039667","ama":"Muller CJ, Back LE, O’Gorman PA, Emanuel KA. A model for the relationship between tropical precipitation and column water vapor. Geophysical Research Letters. 2009;36(16). doi:10.1029/2009gl039667","chicago":"Muller, Caroline J, Larissa E. Back, Paul A. O’Gorman, and Kerry A. Emanuel. “A Model for the Relationship between Tropical Precipitation and Column Water Vapor.” Geophysical Research Letters. American Geophysical Union, 2009. https://doi.org/10.1029/2009gl039667.","ista":"Muller CJ, Back LE, O’Gorman PA, Emanuel KA. 2009. A model for the relationship between tropical precipitation and column water vapor. Geophysical Research Letters. 36(16), L16804."},"date_updated":"2022-01-24T13:50:15Z","issue":"16","date_published":"2009-08-25T00:00:00Z","main_file_link":[{"url":"https://doi.org/10.1029/2009GL039667","open_access":"1"}],"abstract":[{"lang":"eng","text":"Several observational studies have shown a tight relationship between tropical precipitation and column‐integrated water vapor. We show that the observed relationship in the tropics between column‐integrated water vapor, precipitation, and its variance can be qualitatively reproduced by a simple and physically motivated two‐layer model. It has previously been argued that features of this relationship could be explained by analogy with the theory of continuous phase transitions. Instead, our model explicitly assumes that the onset of precipitation is governed by a stability threshold involving boundary‐layer water vapor. This allows us to explain the precipitation‐humidity relationship over a broader range of water vapor values, and may explain the observed temperature dependence of the relationship."}],"article_number":"L16804","title":"A model for the relationship between tropical precipitation and column water vapor","extern":"1","_id":"9148","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","author":[{"last_name":"Muller","first_name":"Caroline J","id":"f978ccb0-3f7f-11eb-b193-b0e2bd13182b","full_name":"Muller, Caroline J","orcid":"0000-0001-5836-5350"},{"full_name":"Back, Larissa E.","last_name":"Back","first_name":"Larissa E."},{"last_name":"O'Gorman","first_name":"Paul A.","full_name":"O'Gorman, Paul A."},{"first_name":"Kerry A.","last_name":"Emanuel","full_name":"Emanuel, Kerry A."}],"publication_status":"published","doi":"10.1029/2009gl039667","publisher":"American Geophysical Union","article_type":"original","month":"08","language":[{"iso":"eng"}],"status":"public","date_created":"2021-02-15T14:41:28Z","day":"25","publication":"Geophysical Research Letters","intvolume":" 36","quality_controlled":"1","article_processing_charge":"No","oa":1},{"doi":"10.1080/14786430902865518","publisher":"Taylor & Francis","publication_status":"published","author":[{"first_name":"X.-D.","last_name":"Yang","full_name":"Yang, X.-D."},{"full_name":"Riseborough, P.S.","first_name":"P.S.","last_name":"Riseborough"},{"id":"13C26AC0-EB69-11E9-87C6-5F3BE6697425","full_name":"Modic, Kimberly A","orcid":"0000-0001-9760-3147","last_name":"Modic","first_name":"Kimberly A"},{"full_name":"Fisher, R.A.","last_name":"Fisher","first_name":"R.A."},{"full_name":"Opeil, C.P.","last_name":"Opeil","first_name":"C.P."},{"full_name":"Finlayson, T.R.","first_name":"T.R.","last_name":"Finlayson"},{"full_name":"Cooley, J.C.","last_name":"Cooley","first_name":"J.C."},{"full_name":"Smith, J.L.","last_name":"Smith","first_name":"J.L."},{"first_name":"P.A.","last_name":"Goddard","full_name":"Goddard, P.A."},{"last_name":"Silhanek","first_name":"A.V.","full_name":"Silhanek, A.V."},{"full_name":"Lashley, J.C.","first_name":"J.C.","last_name":"Lashley"}],"extern":"1","intvolume":" 89","_id":"7080","quality_controlled":"1","article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","abstract":[{"text":"We show evidence that a structural martensitic transition is related to significant changes in the electronic structure, as revealed in thermodynamic measurements made in high magnetic fields. The effect of the magnetic field is considered unusual as many influential investigations of martensitic transitions have emphasized that the structural transitions are primarily lattice dynamical and are driven by the entropy due to the phonons. We provide a theoretical framework, which can be used to describe the effect of the magnetic field on the lattice dynamics in which the field dependence originates from the dielectric constant.","lang":"eng"}],"day":"21","page":"2083-2091","related_material":{"record":[{"relation":"earlier_version","id":"11752","status":"public"}]},"publication":"Philosophical Magazine","title":"Influence of magnetic fields on structural martensitic transitions","date_updated":"2023-02-21T16:26:53Z","status":"public","issue":"22-24","date_created":"2019-11-19T13:48:32Z","date_published":"2009-08-21T00:00:00Z","language":[{"iso":"eng"}],"citation":{"apa":"Yang, X.-D., Riseborough, P. S., Modic, K. A., Fisher, R. A., Opeil, C. P., Finlayson, T. R., … Lashley, J. C. (2009). Influence of magnetic fields on structural martensitic transitions. Philosophical Magazine. Taylor & Francis. https://doi.org/10.1080/14786430902865518","ama":"Yang X-D, Riseborough PS, Modic KA, et al. Influence of magnetic fields on structural martensitic transitions. Philosophical Magazine. 2009;89(22-24):2083-2091. doi:10.1080/14786430902865518","short":"X.-D. Yang, P.S. Riseborough, K.A. Modic, R.A. Fisher, C.P. Opeil, T.R. Finlayson, J.C. Cooley, J.L. Smith, P.A. Goddard, A.V. Silhanek, J.C. Lashley, Philosophical Magazine 89 (2009) 2083–2091.","ieee":"X.-D. Yang et al., “Influence of magnetic fields on structural martensitic transitions,” Philosophical Magazine, vol. 89, no. 22–24. Taylor & Francis, pp. 2083–2091, 2009.","mla":"Yang, X. D., et al. “Influence of Magnetic Fields on Structural Martensitic Transitions.” Philosophical Magazine, vol. 89, no. 22–24, Taylor & Francis, 2009, pp. 2083–91, doi:10.1080/14786430902865518.","ista":"Yang X-D, Riseborough PS, Modic KA, Fisher RA, Opeil CP, Finlayson TR, Cooley JC, Smith JL, Goddard PA, Silhanek AV, Lashley JC. 2009. Influence of magnetic fields on structural martensitic transitions. Philosophical Magazine. 89(22–24), 2083–2091.","chicago":"Yang, X.-D., P.S. Riseborough, Kimberly A Modic, R.A. Fisher, C.P. Opeil, T.R. Finlayson, J.C. Cooley, et al. “Influence of Magnetic Fields on Structural Martensitic Transitions.” Philosophical Magazine. Taylor & Francis, 2009. https://doi.org/10.1080/14786430902865518."},"oa_version":"None","year":"2009","volume":89,"publication_identifier":{"issn":["1478-6435"],"eissn":["1478-6443"]},"month":"08","article_type":"original","type":"journal_article"},{"article_processing_charge":"No","_id":"7319","quality_controlled":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","extern":"1","intvolume":" 156","author":[{"first_name":"Mathias","last_name":"Reum","full_name":"Reum, Mathias"},{"full_name":"Freunberger, Stefan Alexander","orcid":"0000-0003-2902-5319","id":"A8CA28E6-CE23-11E9-AD2D-EC27E6697425","first_name":"Stefan Alexander","last_name":"Freunberger"},{"full_name":"Wokaun, Alexander","last_name":"Wokaun","first_name":"Alexander"},{"full_name":"Büchi, Felix N.","last_name":"Büchi","first_name":"Felix N."}],"publication_status":"published","publisher":"The Electrochemical Society","doi":"10.1149/1.3043422","publication_identifier":{"issn":["0013-4651"]},"month":"03","article_type":"original","type":"journal_article","volume":156,"year":"2009","oa_version":"None","citation":{"ista":"Reum M, Freunberger SA, Wokaun A, Büchi FN. 2009. Measuring the current distribution with sub-millimeter resolution in PEFCs: II. Impact of operating parameters. Journal of The Electrochemical Society. 156(3), B301.","chicago":"Reum, Mathias, Stefan Alexander Freunberger, Alexander Wokaun, and Felix N. Büchi. “Measuring the Current Distribution with Sub-Millimeter Resolution in PEFCs: II. Impact of Operating Parameters.” Journal of The Electrochemical Society. The Electrochemical Society, 2009. https://doi.org/10.1149/1.3043422.","ama":"Reum M, Freunberger SA, Wokaun A, Büchi FN. Measuring the current distribution with sub-millimeter resolution in PEFCs: II. Impact of operating parameters. Journal of The Electrochemical Society. 2009;156(3). doi:10.1149/1.3043422","apa":"Reum, M., Freunberger, S. A., Wokaun, A., & Büchi, F. N. (2009). Measuring the current distribution with sub-millimeter resolution in PEFCs: II. Impact of operating parameters. Journal of The Electrochemical Society. The Electrochemical Society. https://doi.org/10.1149/1.3043422","short":"M. Reum, S.A. Freunberger, A. Wokaun, F.N. Büchi, Journal of The Electrochemical Society 156 (2009).","mla":"Reum, Mathias, et al. “Measuring the Current Distribution with Sub-Millimeter Resolution in PEFCs: II. Impact of Operating Parameters.” Journal of The Electrochemical Society, vol. 156, no. 3, B301, The Electrochemical Society, 2009, doi:10.1149/1.3043422.","ieee":"M. Reum, S. A. Freunberger, A. Wokaun, and F. N. Büchi, “Measuring the current distribution with sub-millimeter resolution in PEFCs: II. Impact of operating parameters,” Journal of The Electrochemical Society, vol. 156, no. 3. The Electrochemical Society, 2009."},"language":[{"iso":"eng"}],"date_created":"2020-01-15T12:21:24Z","issue":"3","date_published":"2009-03-01T00:00:00Z","status":"public","date_updated":"2021-01-12T08:13:01Z","title":"Measuring the current distribution with sub-millimeter resolution in PEFCs: II. Impact of operating parameters","article_number":"B301","publication":"Journal of The Electrochemical Society","abstract":[{"text":"In the first paper of this series, an experimental technique for measuring the current-density distribution with a resolution better than the sub-millimeter scale of the channel and rib structures in the flow-field plates of polymer electrolyte fuel cells (PEFCs) was introduced. This method is extended to the determination of local membrane resistance with the same spatial resolution in the present paper. The combined measurement of current and resistance allows for investigating the interaction of mass- and charge-transport processes, which determine the local rate distribution across the domain of channels and ribs. Therewith, the influence of relevant operating parameters such as reactant composition, dew points, and cell compression on local current generation is investigated. The results show that the distribution of water and oxidant across the channel and rib are the main reasons for significant current gradients on a scale smaller than a millimeter. Humidity variation mainly affects the membrane resistance under the channel, while reactant concentration predominantly influences current generation under the rib-covered cell area.","lang":"eng"}],"day":"01"}]