[{"type":"journal_article","volume":135,"article_processing_charge":"No","year":"2013","day":"07","publication_status":"published","date_updated":"2021-01-12T07:43:21Z","publisher":"American Chemical Society","doi":"10.1021/ja400472m","title":"Metal ions to control the morphology of semiconductor nanoparticles: Copper selenide nanocubes","quality_controlled":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","intvolume":"       135","_id":"342","language":[{"iso":"eng"}],"acknowledgement":"The research was supported by the European Regional Development Funds. M.I. thanks the Spanish MICINN for her Ph.D. grant. J.A. and R.Z. also acknowledge MAT2010-15138.","page":"4664 - 4667","abstract":[{"text":"Morphology is a key parameter in the design of novel nanocrystals and nanomaterials with controlled functional properties. Here, we demonstrate the potential of foreign metal ions to tune the morphology of colloidal semiconductor nanoparticles. We illustrate the underlying mechanism by preparing copper selenide nanocubes in the presence of Al ions. We further characterize the plasmonic properties of the obtained nanocrystals and demonstrate their potential as a platform to produce cubic nanoparticles with different composition by cation exchange. © 2013 American Chemical Society.","lang":"eng"}],"issue":"12","publication":"Journal of the American Chemical Society","publist_id":"7482","date_published":"2013-03-07T00:00:00Z","status":"public","extern":"1","article_type":"original","citation":{"ieee":"W. Li <i>et al.</i>, “Metal ions to control the morphology of semiconductor nanoparticles: Copper selenide nanocubes,” <i>Journal of the American Chemical Society</i>, vol. 135, no. 12. American Chemical Society, pp. 4664–4667, 2013.","chicago":"Li, Wenhua, Reza Zamani, Maria Ibáñez, Doris Cadavid, Alexey Shavel, Joan Morante, Jordi Arbiol, and Andreu Cabot. “Metal Ions to Control the Morphology of Semiconductor Nanoparticles: Copper Selenide Nanocubes.” <i>Journal of the American Chemical Society</i>. American Chemical Society, 2013. <a href=\"https://doi.org/10.1021/ja400472m\">https://doi.org/10.1021/ja400472m</a>.","mla":"Li, Wenhua, et al. “Metal Ions to Control the Morphology of Semiconductor Nanoparticles: Copper Selenide Nanocubes.” <i>Journal of the American Chemical Society</i>, vol. 135, no. 12, American Chemical Society, 2013, pp. 4664–67, doi:<a href=\"https://doi.org/10.1021/ja400472m\">10.1021/ja400472m</a>.","short":"W. Li, R. Zamani, M. Ibáñez, D. Cadavid, A. Shavel, J. Morante, J. Arbiol, A. Cabot, Journal of the American Chemical Society 135 (2013) 4664–4667.","ama":"Li W, Zamani R, Ibáñez M, et al. Metal ions to control the morphology of semiconductor nanoparticles: Copper selenide nanocubes. <i>Journal of the American Chemical Society</i>. 2013;135(12):4664-4667. doi:<a href=\"https://doi.org/10.1021/ja400472m\">10.1021/ja400472m</a>","apa":"Li, W., Zamani, R., Ibáñez, M., Cadavid, D., Shavel, A., Morante, J., … Cabot, A. (2013). Metal ions to control the morphology of semiconductor nanoparticles: Copper selenide nanocubes. <i>Journal of the American Chemical Society</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/ja400472m\">https://doi.org/10.1021/ja400472m</a>","ista":"Li W, Zamani R, Ibáñez M, Cadavid D, Shavel A, Morante J, Arbiol J, Cabot A. 2013. Metal ions to control the morphology of semiconductor nanoparticles: Copper selenide nanocubes. Journal of the American Chemical Society. 135(12), 4664–4667."},"date_created":"2018-12-11T11:45:55Z","oa_version":"None","author":[{"last_name":"Li","first_name":"Wenhua","full_name":"Li, Wenhua"},{"last_name":"Zamani","first_name":"Reza","full_name":"Zamani, Reza"},{"orcid":"0000-0001-5013-2843","full_name":"Ibáñez, Maria","first_name":"Maria","last_name":"Ibáñez","id":"43C61214-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Cadavid","first_name":"Doris","full_name":"Cadavid, Doris"},{"full_name":"Shavel, Alexey","last_name":"Shavel","first_name":"Alexey"},{"last_name":"Morante","first_name":"Joan","full_name":"Morante, Joan"},{"first_name":"Jordi","last_name":"Arbiol","full_name":"Arbiol, Jordi"},{"first_name":"Andreu","last_name":"Cabot","full_name":"Cabot, Andreu"}],"month":"03"},{"date_updated":"2021-01-12T07:43:25Z","publisher":"American Chemical Society","day":"28","publication_status":"published","quality_controlled":"1","doi":"10.1021/nn305971v","title":"Core shell nanoparticles as building blocks for the bottom-up production of functional nanocomposites: PbTe PbS thermoelectric properties","article_processing_charge":"No","type":"journal_article","volume":7,"year":"2013","citation":{"ista":"Ibáñez M, Zamani R, Gorsse S, Fan J, Ortega S, Cadavid D, Morante J, Arbiol J, Cabot A. 2013. Core shell nanoparticles as building blocks for the bottom-up production of functional nanocomposites: PbTe PbS thermoelectric properties. ACS Nano. 7(3), 2573–2586.","apa":"Ibáñez, M., Zamani, R., Gorsse, S., Fan, J., Ortega, S., Cadavid, D., … Cabot, A. (2013). Core shell nanoparticles as building blocks for the bottom-up production of functional nanocomposites: PbTe PbS thermoelectric properties. <i>ACS Nano</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/nn305971v\">https://doi.org/10.1021/nn305971v</a>","ama":"Ibáñez M, Zamani R, Gorsse S, et al. Core shell nanoparticles as building blocks for the bottom-up production of functional nanocomposites: PbTe PbS thermoelectric properties. <i>ACS Nano</i>. 2013;7(3):2573-2586. doi:<a href=\"https://doi.org/10.1021/nn305971v\">10.1021/nn305971v</a>","short":"M. Ibáñez, R. Zamani, S. Gorsse, J. Fan, S. Ortega, D. Cadavid, J. Morante, J. Arbiol, A. Cabot, ACS Nano 7 (2013) 2573–2586.","mla":"Ibáñez, Maria, et al. “Core Shell Nanoparticles as Building Blocks for the Bottom-up Production of Functional Nanocomposites: PbTe PbS Thermoelectric Properties.” <i>ACS Nano</i>, vol. 7, no. 3, American Chemical Society, 2013, pp. 2573–86, doi:<a href=\"https://doi.org/10.1021/nn305971v\">10.1021/nn305971v</a>.","chicago":"Ibáñez, Maria, Reza Zamani, Stéphane Gorsse, Jiandong Fan, Silvia Ortega, Doris Cadavid, Joan Morante, Jordi Arbiol, and Andreu Cabot. “Core Shell Nanoparticles as Building Blocks for the Bottom-up Production of Functional Nanocomposites: PbTe PbS Thermoelectric Properties.” <i>ACS Nano</i>. American Chemical Society, 2013. <a href=\"https://doi.org/10.1021/nn305971v\">https://doi.org/10.1021/nn305971v</a>.","ieee":"M. Ibáñez <i>et al.</i>, “Core shell nanoparticles as building blocks for the bottom-up production of functional nanocomposites: PbTe PbS thermoelectric properties,” <i>ACS Nano</i>, vol. 7, no. 3. American Chemical Society, pp. 2573–2586, 2013."},"date_created":"2018-12-11T11:45:55Z","extern":"1","article_type":"original","author":[{"orcid":"0000-0001-5013-2843","full_name":"Ibáñez, Maria","id":"43C61214-F248-11E8-B48F-1D18A9856A87","first_name":"Maria","last_name":"Ibáñez"},{"first_name":"Reza","last_name":"Zamani","full_name":"Zamani, Reza"},{"full_name":"Gorsse, Stéphane","first_name":"Stéphane","last_name":"Gorsse"},{"full_name":"Fan, Jiandong","last_name":"Fan","first_name":"Jiandong"},{"first_name":"Silvia","last_name":"Ortega","full_name":"Ortega, Silvia"},{"first_name":"Doris","last_name":"Cadavid","full_name":"Cadavid, Doris"},{"full_name":"Morante, Joan","first_name":"Joan","last_name":"Morante"},{"full_name":"Arbiol, Jordi","last_name":"Arbiol","first_name":"Jordi"},{"last_name":"Cabot","first_name":"Andreu","full_name":"Cabot, Andreu"}],"oa_version":"None","month":"02","_id":"343","intvolume":"         7","language":[{"iso":"eng"}],"acknowledgement":"The research was supported by the European Regional Development Funds (ERDF, “FEDER Programa Competitivitat de Catalunya 2007-2013”) and the Spanish MICINN Projects MAT2008-05779, MAT2010-15138, CSD2009-00050, and CSD2009-00013. M.I. thanks the Spanish MICINN for her Ph.D. grant. J.A. and R.Z. also acknowledge Generalitat de Catalunya 2009-SGR-770 and XaRMAE.\r\n\r\nThe authors declare no competing financial interest.","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","issue":"3","publication":"ACS Nano","publist_id":"7483","status":"public","date_published":"2013-02-28T00:00:00Z","page":"2573 - 2586","abstract":[{"text":"The bottom-up assembly of nanocrystals provides access to a three-dimensional composition control at the nanoscale not attainable by any other technology. In particular, colloidal nanoheterostructures, with intrinsic multiphase organization, are especially appealing building blocks for the bottom-up production of nanocomposites. In the present work, we use PbTe-PbS as the model material system and thermoelectricity as the paradigmatic application to investigate the potential of the bottom-up assembly of core-shell nanoparticles to produce functional nanocomposites. With this goal in mind, a rapid, high-yield and scalable colloidal synthetic route to prepare grams of PbTe@PbS core-shell nanoparticles with unprecedented narrow size distributions and exceptional composition control is detailed. PbTe@PbS nanoparticles were used as building blocks for the bottom-up production of PbTe-PbS nanocomposites with tuned composition. In such PbTe-PbS nanocomposites, synergistic nanocrystal doping effects result in up to 10-fold higher electrical conductivities than in pure PbTe and PbS nanomaterials. At the same time, the acoustic impedance mismatch between PbTe and PbS phases and a partial phase alloying provide PbTe-PbS nanocomposites with strongly reduced thermal conductivities. As a result, record thermoelectric figures of merit (ZT) of ∼1.1 were obtained from undoped PbTe and PbS phases at 710 K. These high ZT values prove the potential of the proposed processes to produce efficient functional nanomaterials with programmable properties. © 2013 American Chemical Society.","lang":"eng"}]},{"oa_version":"Submitted Version","date_created":"2018-12-11T11:45:56Z","extern":"1","publist_id":"7484","publication":"Journal of Materials Chemistry A","status":"public","date_published":"2013-01-28T00:00:00Z","abstract":[{"text":"Copper-based selenides are attracting increasing interest due to their outstanding optoelectronic and thermoelectric properties. Herein a novel colloidal synthetic route to prepare Cu2SnSe3 nanocrystals with controlled size, shape and composition is presented. The high yield of the developed procedure allowed its up-scaling to the production of grams of colloidal Cu2SnSe3 nanocrystals. These nanocrystals were used as building blocks for the production of Cu2SnSe3 bulk nanostructured materials by spark plasma sintering. The thermoelectric properties of the prepared nanocrystalline Cu2SnSe3 pellets were characterized in the temperature range from 300 to 720 K. The obtained results show the bottom-up production of nanocrystalline materials from solution-processed nanocrystals to be a potentially advantageous alternative to conventional methods of production of efficient thermoelectric materials.","lang":"eng"}],"intvolume":"         1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","quality_controlled":"1","publisher":"Royal Society of Chemistry","publication_status":"published","main_file_link":[{"open_access":"1","url":"https://hal.archives-ouvertes.fr/hal-00917429/"}],"type":"journal_article","volume":1,"author":[{"id":"43C61214-F248-11E8-B48F-1D18A9856A87","last_name":"Ibáñez","first_name":"Maria","orcid":"0000-0001-5013-2843","full_name":"Ibáñez, Maria"},{"last_name":"Cadavid","first_name":"Doris","full_name":"Cadavid, Doris"},{"full_name":"Anselmi Tamburini, Umberto","first_name":"Umberto","last_name":"Anselmi Tamburini"},{"full_name":"Zamani, Reza","first_name":"Reza","last_name":"Zamani"},{"full_name":"Gorsse, Stéphane","first_name":"Stéphane","last_name":"Gorsse"},{"last_name":"Li","first_name":"Wenhua","full_name":"Li, Wenhua"},{"first_name":"Antonio","last_name":"López","full_name":"López, Antonio"},{"full_name":"Morante, Joan","first_name":"Joan","last_name":"Morante"},{"last_name":"Arbiol","first_name":"Jordi","full_name":"Arbiol, Jordi"},{"full_name":"Cabot, Andreu","last_name":"Cabot","first_name":"Andreu"}],"month":"01","citation":{"short":"M. Ibáñez, D. Cadavid, U. Anselmi Tamburini, R. Zamani, S. Gorsse, W. Li, A. López, J. Morante, J. Arbiol, A. Cabot, Journal of Materials Chemistry A 1 (2013) 1421–1426.","mla":"Ibáñez, Maria, et al. “Colloidal Synthesis and Thermoelectric Properties of Cu 2SnSe3 Nanocrystals.” <i>Journal of Materials Chemistry A</i>, vol. 1, no. 4, Royal Society of Chemistry, 2013, pp. 1421–26, doi:<a href=\"https://doi.org/10.1039/C2TA00419D\">10.1039/C2TA00419D</a>.","ieee":"M. Ibáñez <i>et al.</i>, “Colloidal synthesis and thermoelectric properties of Cu 2SnSe3 nanocrystals,” <i>Journal of Materials Chemistry A</i>, vol. 1, no. 4. Royal Society of Chemistry, pp. 1421–1426, 2013.","chicago":"Ibáñez, Maria, Doris Cadavid, Umberto Anselmi Tamburini, Reza Zamani, Stéphane Gorsse, Wenhua Li, Antonio López, Joan Morante, Jordi Arbiol, and Andreu Cabot. “Colloidal Synthesis and Thermoelectric Properties of Cu 2SnSe3 Nanocrystals.” <i>Journal of Materials Chemistry A</i>. Royal Society of Chemistry, 2013. <a href=\"https://doi.org/10.1039/C2TA00419D\">https://doi.org/10.1039/C2TA00419D</a>.","apa":"Ibáñez, M., Cadavid, D., Anselmi Tamburini, U., Zamani, R., Gorsse, S., Li, W., … Cabot, A. (2013). Colloidal synthesis and thermoelectric properties of Cu 2SnSe3 nanocrystals. <i>Journal of Materials Chemistry A</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/C2TA00419D\">https://doi.org/10.1039/C2TA00419D</a>","ista":"Ibáñez M, Cadavid D, Anselmi Tamburini U, Zamani R, Gorsse S, Li W, López A, Morante J, Arbiol J, Cabot A. 2013. Colloidal synthesis and thermoelectric properties of Cu 2SnSe3 nanocrystals. Journal of Materials Chemistry A. 1(4), 1421–1426.","ama":"Ibáñez M, Cadavid D, Anselmi Tamburini U, et al. Colloidal synthesis and thermoelectric properties of Cu 2SnSe3 nanocrystals. <i>Journal of Materials Chemistry A</i>. 2013;1(4):1421-1426. doi:<a href=\"https://doi.org/10.1039/C2TA00419D\">10.1039/C2TA00419D</a>"},"article_type":"original","issue":"4","page":"1421 - 1426","language":[{"iso":"eng"}],"_id":"344","doi":"10.1039/C2TA00419D","title":"Colloidal synthesis and thermoelectric properties of Cu 2SnSe3 nanocrystals","date_updated":"2021-01-12T07:43:28Z","day":"28","year":"2013","article_processing_charge":"No","oa":1},{"month":"10","oa_version":"None","author":[{"first_name":"Alex","last_name":"Carrete","full_name":"Carrete, Alex"},{"first_name":"Alexey","last_name":"Shavel","full_name":"Shavel, Alexey"},{"full_name":"Fontané, Xavier","first_name":"Xavier","last_name":"Fontané"},{"last_name":"Montserrat","first_name":"Joana","full_name":"Montserrat, Joana"},{"full_name":"Fan, Jiandong","first_name":"Jiandong","last_name":"Fan"},{"full_name":"Ibáñez, Maria","orcid":"0000-0001-5013-2843","id":"43C61214-F248-11E8-B48F-1D18A9856A87","first_name":"Maria","last_name":"Ibáñez"},{"first_name":"Edgardo","last_name":"Saucedo","full_name":"Saucedo, Edgardo"},{"last_name":"Pérez Rodríguez","first_name":"Alejandro","full_name":"Pérez Rodríguez, Alejandro"},{"first_name":"Andreu","last_name":"Cabot","full_name":"Cabot, Andreu"}],"citation":{"ieee":"A. Carrete <i>et al.</i>, “Antimony-based ligand exchange to promote crystallization in spray-deposited Cu2ZnSnSe4 solar cells,” <i>Journal of the American Chemical Society</i>, vol. 135, no. 43. American Chemical Society, pp. 15982–15985, 2013.","chicago":"Carrete, Alex, Alexey Shavel, Xavier Fontané, Joana Montserrat, Jiandong Fan, Maria Ibáñez, Edgardo Saucedo, Alejandro Pérez Rodríguez, and Andreu Cabot. “Antimony-Based Ligand Exchange to Promote Crystallization in Spray-Deposited Cu2ZnSnSe4 Solar Cells.” <i>Journal of the American Chemical Society</i>. American Chemical Society, 2013. <a href=\"https://doi.org/10.1021/ja4068639\">https://doi.org/10.1021/ja4068639</a>.","mla":"Carrete, Alex, et al. “Antimony-Based Ligand Exchange to Promote Crystallization in Spray-Deposited Cu2ZnSnSe4 Solar Cells.” <i>Journal of the American Chemical Society</i>, vol. 135, no. 43, American Chemical Society, 2013, pp. 15982–85, doi:<a href=\"https://doi.org/10.1021/ja4068639\">10.1021/ja4068639</a>.","short":"A. Carrete, A. Shavel, X. Fontané, J. Montserrat, J. Fan, M. Ibáñez, E. Saucedo, A. Pérez Rodríguez, A. Cabot, Journal of the American Chemical Society 135 (2013) 15982–15985.","ama":"Carrete A, Shavel A, Fontané X, et al. Antimony-based ligand exchange to promote crystallization in spray-deposited Cu2ZnSnSe4 solar cells. <i>Journal of the American Chemical Society</i>. 2013;135(43):15982-15985. doi:<a href=\"https://doi.org/10.1021/ja4068639\">10.1021/ja4068639</a>","apa":"Carrete, A., Shavel, A., Fontané, X., Montserrat, J., Fan, J., Ibáñez, M., … Cabot, A. (2013). Antimony-based ligand exchange to promote crystallization in spray-deposited Cu2ZnSnSe4 solar cells. <i>Journal of the American Chemical Society</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/ja4068639\">https://doi.org/10.1021/ja4068639</a>","ista":"Carrete A, Shavel A, Fontané X, Montserrat J, Fan J, Ibáñez M, Saucedo E, Pérez Rodríguez A, Cabot A. 2013. Antimony-based ligand exchange to promote crystallization in spray-deposited Cu2ZnSnSe4 solar cells. Journal of the American Chemical Society. 135(43), 15982–15985."},"date_created":"2018-12-11T11:45:58Z","extern":"1","article_type":"original","date_published":"2013-10-30T00:00:00Z","status":"public","publication":"Journal of the American Chemical Society","publist_id":"7479","issue":"43","abstract":[{"text":"A multistrategy approach to overcome the main challenges of nanoparticle-based solution-processed Cu2ZnSnSe4 thin film solar cells is presented. We developed an efficient ligand exchange strategy, using an antimony salt, to displace organic ligands from the surface of Cu 2ZnSnS4 nanoparticles. An automated pulsed spray-deposition system was used to deposit the nanoparticles into homogeneous and crack-free films with controlled thickness. After annealing the film in a Se-rich atmosphere, carbon-free and crystalline Cu2ZnSnSe4 absorber layers were obtained. Not only was crystallization promoted by the complete removal of organics, but also Sb itself played a critical role. The Sb-assisted crystal growth is associated with the formation of a Sb-based compound at the grain boundaries, which locally reduces the melting point, thus promoting the film diffusion-limited crystallization. ","lang":"eng"}],"page":"15982 - 15985","acknowledgement":"This work was supported by the European Regional Development Funds and the Framework 7 program under project SCALENANO (FP7-NMP-ENERGY-2011-284486). E.S. thanks the Spanish government for the “Ramon y Cajal” fellowship (RYC-2011-09212).","_id":"351","language":[{"iso":"eng"}],"intvolume":"       135","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","quality_controlled":"1","title":"Antimony-based ligand exchange to promote crystallization in spray-deposited Cu2ZnSnSe4 solar cells","doi":"10.1021/ja4068639","publisher":"American Chemical Society","date_updated":"2021-01-12T07:43:57Z","publication_status":"published","day":"30","year":"2013","article_processing_charge":"No","volume":135,"type":"journal_article"},{"page":"4864 - 4870","abstract":[{"lang":"eng","text":"The presence of organic ligands on the surface of colloidal nanoparticles strongly limits their performance in technological applications where charge carrier transfer/transport plays an important role. We use metal salts, matched with the nanoparticle composition, to eliminate the surface organic ligands without introducing extrinsic impurities in the final nanomaterial. The potential of the simple, general and scalable processes presented here is demonstrated by characterizing the thermoelectric properties of nanostructured Ag2Te produced by the bottom up assembly of Ag2Te nanocrystals. A 6-fold increase of the thermoelectric figure of merit of Ag2Te was obtained when organic ligands were displaced by AgNO3. The same procedure can enhance the performance of nanocrystals and nanocrystal-based devices in a broad range of applications, from photovoltaics and thermoelectrics to catalysis."}],"publication":"Journal of Materials Chemistry A","issue":"15","publist_id":"7481","status":"public","date_published":"2013-02-13T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"352","language":[{"iso":"eng"}],"intvolume":"         1","oa_version":"None","author":[{"full_name":"Cadavid, Doris","last_name":"Cadavid","first_name":"Doris"},{"full_name":"Ibáñez, Maria","orcid":"0000-0001-5013-2843","id":"43C61214-F248-11E8-B48F-1D18A9856A87","first_name":"Maria","last_name":"Ibáñez"},{"full_name":"Shavel, Alexey","first_name":"Alexey","last_name":"Shavel"},{"full_name":"Durá, Oscar","first_name":"Oscar","last_name":"Durá"},{"full_name":"López De La Torre, Marco","first_name":"Marco","last_name":"López De La Torre"},{"first_name":"Andreu","last_name":"Cabot","full_name":"Cabot, Andreu"}],"month":"02","extern":"1","article_type":"original","citation":{"ista":"Cadavid D, Ibáñez M, Shavel A, Durá O, López De La Torre M, Cabot A. 2013. Organic ligand displacement by metal salts to enhance nanoparticle functionality: Thermoelectric properties of Ag inf 2 inf Te. Journal of Materials Chemistry A. 1(15), 4864–4870.","apa":"Cadavid, D., Ibáñez, M., Shavel, A., Durá, O., López De La Torre, M., &#38; Cabot, A. (2013). Organic ligand displacement by metal salts to enhance nanoparticle functionality: Thermoelectric properties of Ag inf 2 inf Te. <i>Journal of Materials Chemistry A</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/C3TA01455J\">https://doi.org/10.1039/C3TA01455J</a>","ama":"Cadavid D, Ibáñez M, Shavel A, Durá O, López De La Torre M, Cabot A. Organic ligand displacement by metal salts to enhance nanoparticle functionality: Thermoelectric properties of Ag inf 2 inf Te. <i>Journal of Materials Chemistry A</i>. 2013;1(15):4864-4870. doi:<a href=\"https://doi.org/10.1039/C3TA01455J\">10.1039/C3TA01455J</a>","short":"D. Cadavid, M. Ibáñez, A. Shavel, O. Durá, M. López De La Torre, A. Cabot, Journal of Materials Chemistry A 1 (2013) 4864–4870.","mla":"Cadavid, Doris, et al. “Organic Ligand Displacement by Metal Salts to Enhance Nanoparticle Functionality: Thermoelectric Properties of Ag Inf 2 Inf Te.” <i>Journal of Materials Chemistry A</i>, vol. 1, no. 15, Royal Society of Chemistry, 2013, pp. 4864–70, doi:<a href=\"https://doi.org/10.1039/C3TA01455J\">10.1039/C3TA01455J</a>.","chicago":"Cadavid, Doris, Maria Ibáñez, Alexey Shavel, Oscar Durá, Marco López De La Torre, and Andreu Cabot. “Organic Ligand Displacement by Metal Salts to Enhance Nanoparticle Functionality: Thermoelectric Properties of Ag Inf 2 Inf Te.” <i>Journal of Materials Chemistry A</i>. Royal Society of Chemistry, 2013. <a href=\"https://doi.org/10.1039/C3TA01455J\">https://doi.org/10.1039/C3TA01455J</a>.","ieee":"D. Cadavid, M. Ibáñez, A. Shavel, O. Durá, M. López De La Torre, and A. Cabot, “Organic ligand displacement by metal salts to enhance nanoparticle functionality: Thermoelectric properties of Ag inf 2 inf Te,” <i>Journal of Materials Chemistry A</i>, vol. 1, no. 15. Royal Society of Chemistry, pp. 4864–4870, 2013."},"date_created":"2018-12-11T11:45:58Z","year":"2013","type":"journal_article","volume":1,"article_processing_charge":"No","doi":"10.1039/C3TA01455J","title":"Organic ligand displacement by metal salts to enhance nanoparticle functionality: Thermoelectric properties of Ag inf 2 inf Te","quality_controlled":"1","day":"13","publication_status":"published","date_updated":"2021-01-12T07:44:02Z","publisher":"Royal Society of Chemistry"},{"article_type":"original","extern":"1","date_created":"2018-12-11T11:45:59Z","citation":{"apa":"Li, W., Zamani, R., Rivera Gil, P., Pelaz, B., Ibáñez, M., Cadavid, D., … Cabot, A. (2013). CuTe nanocrystals: Shape and size control, plasmonic properties, and use as SERS probes and photothermal agents. <i>Journal of the American Chemical Society</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/ja401428e\">https://doi.org/10.1021/ja401428e</a>","ista":"Li W, Zamani R, Rivera Gil P, Pelaz B, Ibáñez M, Cadavid D, Shavel A, Alvarez Puebla R, Parak W, Arbiol J, Cabot A. 2013. CuTe nanocrystals: Shape and size control, plasmonic properties, and use as SERS probes and photothermal agents. Journal of the American Chemical Society. 135(19), 7098–7101.","ama":"Li W, Zamani R, Rivera Gil P, et al. CuTe nanocrystals: Shape and size control, plasmonic properties, and use as SERS probes and photothermal agents. <i>Journal of the American Chemical Society</i>. 2013;135(19):7098-7101. doi:<a href=\"https://doi.org/10.1021/ja401428e\">10.1021/ja401428e</a>","short":"W. Li, R. Zamani, P. Rivera Gil, B. Pelaz, M. Ibáñez, D. Cadavid, A. Shavel, R. Alvarez Puebla, W. Parak, J. Arbiol, A. Cabot, Journal of the American Chemical Society 135 (2013) 7098–7101.","mla":"Li, Wenhua, et al. “CuTe Nanocrystals: Shape and Size Control, Plasmonic Properties, and Use as SERS Probes and Photothermal Agents.” <i>Journal of the American Chemical Society</i>, vol. 135, no. 19, American Chemical Society, 2013, pp. 7098–101, doi:<a href=\"https://doi.org/10.1021/ja401428e\">10.1021/ja401428e</a>.","ieee":"W. Li <i>et al.</i>, “CuTe nanocrystals: Shape and size control, plasmonic properties, and use as SERS probes and photothermal agents,” <i>Journal of the American Chemical Society</i>, vol. 135, no. 19. American Chemical Society, pp. 7098–7101, 2013.","chicago":"Li, Wenhua, Reza Zamani, Pilar Rivera Gil, Beatriz Pelaz, Maria Ibáñez, Doris Cadavid, Alexey Shavel, et al. “CuTe Nanocrystals: Shape and Size Control, Plasmonic Properties, and Use as SERS Probes and Photothermal Agents.” <i>Journal of the American Chemical Society</i>. American Chemical Society, 2013. <a href=\"https://doi.org/10.1021/ja401428e\">https://doi.org/10.1021/ja401428e</a>."},"author":[{"full_name":"Li, Wenhua","last_name":"Li","first_name":"Wenhua"},{"first_name":"Reza","last_name":"Zamani","full_name":"Zamani, Reza"},{"full_name":"Rivera Gil, Pilar","first_name":"Pilar","last_name":"Rivera Gil"},{"full_name":"Pelaz, Beatriz","last_name":"Pelaz","first_name":"Beatriz"},{"full_name":"Ibáñez, Maria","orcid":"0000-0001-5013-2843","id":"43C61214-F248-11E8-B48F-1D18A9856A87","last_name":"Ibáñez","first_name":"Maria"},{"last_name":"Cadavid","first_name":"Doris","full_name":"Cadavid, Doris"},{"last_name":"Shavel","first_name":"Alexey","full_name":"Shavel, Alexey"},{"full_name":"Alvarez Puebla, Ramon","last_name":"Alvarez Puebla","first_name":"Ramon"},{"last_name":"Parak","first_name":"Wolfgang","full_name":"Parak, Wolfgang"},{"first_name":"Jordi","last_name":"Arbiol","full_name":"Arbiol, Jordi"},{"full_name":"Cabot, Andreu","first_name":"Andreu","last_name":"Cabot"}],"oa_version":"None","month":"04","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"353","intvolume":"       135","language":[{"iso":"eng"}],"acknowledgement":"This research was supported by the European Regional Development Funds. J.A. and R.Z. acknowledge MAT2010-15138. Part of this work was supported by HFSP grant RGP0052/2012 to W.J.P.","page":"7098 - 7101","abstract":[{"lang":"eng","text":"We report a procedure to prepare highly monodisperse copper telluride nanocubes, nanoplates, and nanorods. The procedure is based on the reaction of a copper salt with trioctylphosphine telluride in the presence of lithium bis(trimethylsilyl)amide and oleylamine. CuTe nanocrystals display a strong near-infrared optical absorption associated with localized surface plasmon resonances. We exploit this plasmon resonance for the design of surface-enhanced Raman scattering sensors for unconventional optical probes. Furthermore, we also report here our preliminary analysis of the use of CuTe nanocrystals as cytotoxic and photothermal agents."}],"publication":"Journal of the American Chemical Society","publist_id":"7480","issue":"19","status":"public","date_published":"2013-04-30T00:00:00Z","day":"30","publication_status":"published","date_updated":"2021-01-12T07:44:06Z","publisher":"American Chemical Society","doi":"10.1021/ja401428e","title":"CuTe nanocrystals: Shape and size control, plasmonic properties, and use as SERS probes and photothermal agents","quality_controlled":"1","type":"journal_article","volume":135,"article_processing_charge":"No","year":"2013"},{"type":"journal_article","volume":44,"year":"2013","day":"23","publication_status":"published","date_updated":"2021-01-12T07:52:00Z","publisher":"Royal Society of Chemistry","doi":"10.1039/C3CE41583J","title":"Cu2HgSnSe4 nanoparticles: synthesis and thermoelectric properties","quality_controlled":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"376","intvolume":"        44","language":[{"iso":"eng"}],"page":"8966 - 8971","abstract":[{"lang":"eng","text":"The compositional versatility of I2–II–IV–VI4 tetrahedrally-coordinated compounds allows for accommodating their functional properties to numerous technological applications. Among them, Cu2ZnSnSe4 is an emerging photovoltaic material and Cu2CdSnSe4 displays excellent thermoelectric properties. The third compound of this family, Cu2HgSnSe4, remains relatively unexplored. Herein, a synthetic route to produce Cu2HgSnSe4 nanoparticles with narrow size distribution and controlled composition is presented. Cu2HgSnSe4 nanoparticles were subsequently used as building blocks to produce bulk nanocrystalline materials, whose thermoelectric properties were analyzed. A very preliminary adjustment of the material composition yielded Seebeck coefficients up to 160 μV K−1, electrical conductivities close to 104 S m−1 and thermal conductivities down to 0.5 W m−1 K−1."}],"publication":"CrystEngComm","publist_id":"7453","status":"public","date_published":"2013-09-23T00:00:00Z","extern":"1","citation":{"apa":"Li, W., Ibáñez, M., Zamani, R., García Castelló, N., Stéphane, G., Cadavid, D., … Cabot, A. (2013). Cu2HgSnSe4 nanoparticles: synthesis and thermoelectric properties. <i>CrystEngComm</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/C3CE41583J\">https://doi.org/10.1039/C3CE41583J</a>","ista":"Li W, Ibáñez M, Zamani R, García Castelló N, Stéphane G, Cadavid D, Prades J, Arbiol J, Cabot A. 2013. Cu2HgSnSe4 nanoparticles: synthesis and thermoelectric properties. CrystEngComm. 44, 8966–8971.","ama":"Li W, Ibáñez M, Zamani R, et al. Cu2HgSnSe4 nanoparticles: synthesis and thermoelectric properties. <i>CrystEngComm</i>. 2013;44:8966-8971. doi:<a href=\"https://doi.org/10.1039/C3CE41583J\">10.1039/C3CE41583J</a>","mla":"Li, Wenhua, et al. “Cu2HgSnSe4 Nanoparticles: Synthesis and Thermoelectric Properties.” <i>CrystEngComm</i>, vol. 44, Royal Society of Chemistry, 2013, pp. 8966–71, doi:<a href=\"https://doi.org/10.1039/C3CE41583J\">10.1039/C3CE41583J</a>.","short":"W. Li, M. Ibáñez, R. Zamani, N. García Castelló, G. Stéphane, D. Cadavid, J. Prades, J. Arbiol, A. Cabot, CrystEngComm 44 (2013) 8966–8971.","ieee":"W. Li <i>et al.</i>, “Cu2HgSnSe4 nanoparticles: synthesis and thermoelectric properties,” <i>CrystEngComm</i>, vol. 44. Royal Society of Chemistry, pp. 8966–8971, 2013.","chicago":"Li, Wenhua, Maria Ibáñez, Reza Zamani, Nuria García Castelló, Grosse Stéphane, Doris Cadavid, Joan Prades, Jordi Arbiol, and Andreu Cabot. “Cu2HgSnSe4 Nanoparticles: Synthesis and Thermoelectric Properties.” <i>CrystEngComm</i>. Royal Society of Chemistry, 2013. <a href=\"https://doi.org/10.1039/C3CE41583J\">https://doi.org/10.1039/C3CE41583J</a>."},"date_created":"2018-12-11T11:46:07Z","author":[{"full_name":"Li, Wenhua","last_name":"Li","first_name":"Wenhua"},{"id":"43C61214-F248-11E8-B48F-1D18A9856A87","first_name":"Maria","last_name":"Ibáñez","full_name":"Ibáñez, Maria","orcid":"0000-0001-5013-2843"},{"first_name":"Reza","last_name":"Zamani","full_name":"Zamani, Reza"},{"last_name":"García Castelló","first_name":"Nuria","full_name":"García Castelló, Nuria"},{"full_name":"Stéphane, Grosse","first_name":"Grosse","last_name":"Stéphane"},{"last_name":"Cadavid","first_name":"Doris","full_name":"Cadavid, Doris"},{"full_name":"Prades, Joan","first_name":"Joan","last_name":"Prades"},{"full_name":"Arbiol, Jordi","last_name":"Arbiol","first_name":"Jordi"},{"first_name":"Andreu","last_name":"Cabot","full_name":"Cabot, Andreu"}],"oa_version":"None","month":"09"},{"extern":"1","citation":{"ieee":"M. Ibáñez and A. Cabot, “All change for nanocrystals,” <i>Science</i>, vol. 340, no. 6135. American Association for the Advancement of Science, pp. 935–936, 2013.","chicago":"Ibáñez, Maria, and Andreu Cabot. “All Change for Nanocrystals.” <i>Science</i>. American Association for the Advancement of Science, 2013. <a href=\"https://doi.org/10.1126/science.1239221\">https://doi.org/10.1126/science.1239221</a>.","mla":"Ibáñez, Maria, and Andreu Cabot. “All Change for Nanocrystals.” <i>Science</i>, vol. 340, no. 6135, American Association for the Advancement of Science, 2013, pp. 935–36, doi:<a href=\"https://doi.org/10.1126/science.1239221\">10.1126/science.1239221</a>.","short":"M. Ibáñez, A. Cabot, Science 340 (2013) 935–936.","ama":"Ibáñez M, Cabot A. All change for nanocrystals. <i>Science</i>. 2013;340(6135):935-936. doi:<a href=\"https://doi.org/10.1126/science.1239221\">10.1126/science.1239221</a>","apa":"Ibáñez, M., &#38; Cabot, A. (2013). All change for nanocrystals. <i>Science</i>. American Association for the Advancement of Science. <a href=\"https://doi.org/10.1126/science.1239221\">https://doi.org/10.1126/science.1239221</a>","ista":"Ibáñez M, Cabot A. 2013. All change for nanocrystals. Science. 340(6135), 935–936."},"date_created":"2018-12-11T11:46:08Z","month":"05","author":[{"full_name":"Ibáñez, Maria","orcid":"0000-0001-5013-2843","id":"43C61214-F248-11E8-B48F-1D18A9856A87","last_name":"Ibáñez","first_name":"Maria"},{"last_name":"Cabot","first_name":"Andreu","full_name":"Cabot, Andreu"}],"oa_version":"None","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","language":[{"iso":"eng"}],"_id":"378","intvolume":"       340","abstract":[{"text":"Until recently, to prepare nanocrystals of a new material, scientists searched their shelves for the appropriate molecular precursors, surfactants, and solvents. They then optimized the reaction conditions for the atoms to self-assemble into monodisperse nanocrystals (1). This approach is being replaced by a simpler strategy, in which preformed nanocrystals serve as templates to produce nanoparticles with a different composition through chemical transformation. On page 964 of this issue, Oh et al. (2) report a powerful mechanism that allows the composition of oxide nanoparticles to be transformed in solution and at low temperatures.","lang":"eng"}],"page":"935 - 936","date_published":"2013-05-24T00:00:00Z","status":"public","issue":"6135","publist_id":"7451","publication":"Science","publication_status":"published","day":"24","publisher":"American Association for the Advancement of Science","date_updated":"2021-01-12T07:52:09Z","title":"All change for nanocrystals","doi":"10.1126/science.1239221","volume":340,"type":"journal_article","article_processing_charge":"No","year":"2013"},{"language":[{"iso":"eng"}],"_id":"450","issue":"1750","citation":{"ieee":"M. Pickup, D. Field, D. Rowell, and A. Young, “Source population characteristics affect heterosis following genetic rescue of fragmented plant populations,” <i>Proceedings of the Royal Society of London Series B Biological Sciences</i>, vol. 280, no. 1750. Royal Society, The, 2013.","chicago":"Pickup, Melinda, David Field, David Rowell, and Andrew Young. “Source Population Characteristics Affect Heterosis Following Genetic Rescue of Fragmented Plant Populations.” <i>Proceedings of the Royal Society of London Series B Biological Sciences</i>. Royal Society, The, 2013. <a href=\"https://doi.org/10.1098/rspb.2012.2058\">https://doi.org/10.1098/rspb.2012.2058</a>.","short":"M. Pickup, D. Field, D. Rowell, A. Young, Proceedings of the Royal Society of London Series B Biological Sciences 280 (2013).","mla":"Pickup, Melinda, et al. “Source Population Characteristics Affect Heterosis Following Genetic Rescue of Fragmented Plant Populations.” <i>Proceedings of the Royal Society of London Series B Biological Sciences</i>, vol. 280, no. 1750, 2058, Royal Society, The, 2013, doi:<a href=\"https://doi.org/10.1098/rspb.2012.2058\">10.1098/rspb.2012.2058</a>.","ama":"Pickup M, Field D, Rowell D, Young A. Source population characteristics affect heterosis following genetic rescue of fragmented plant populations. <i>Proceedings of the Royal Society of London Series B Biological Sciences</i>. 2013;280(1750). doi:<a href=\"https://doi.org/10.1098/rspb.2012.2058\">10.1098/rspb.2012.2058</a>","apa":"Pickup, M., Field, D., Rowell, D., &#38; Young, A. (2013). Source population characteristics affect heterosis following genetic rescue of fragmented plant populations. <i>Proceedings of the Royal Society of London Series B Biological Sciences</i>. Royal Society, The. <a href=\"https://doi.org/10.1098/rspb.2012.2058\">https://doi.org/10.1098/rspb.2012.2058</a>","ista":"Pickup M, Field D, Rowell D, Young A. 2013. Source population characteristics affect heterosis following genetic rescue of fragmented plant populations. Proceedings of the Royal Society of London Series B Biological Sciences. 280(1750), 2058."},"author":[{"id":"2C78037E-F248-11E8-B48F-1D18A9856A87","first_name":"Melinda","last_name":"Pickup","orcid":"0000-0001-6118-0541","full_name":"Pickup, Melinda"},{"first_name":"David","last_name":"Field","id":"419049E2-F248-11E8-B48F-1D18A9856A87","full_name":"Field, David","orcid":"0000-0002-4014-8478"},{"full_name":"Rowell, David","last_name":"Rowell","first_name":"David"},{"full_name":"Young, Andrew","first_name":"Andrew","last_name":"Young"}],"article_number":"2058","month":"01","oa":1,"year":"2013","date_updated":"2021-01-12T07:57:25Z","day":"07","external_id":{"pmid":["23173202"]},"doi":"10.1098/rspb.2012.2058","title":"Source population characteristics affect heterosis following genetic rescue of fragmented plant populations","intvolume":"       280","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication":"Proceedings of the Royal Society of London Series B Biological Sciences","publist_id":"7372","date_published":"2013-01-07T00:00:00Z","status":"public","abstract":[{"lang":"eng","text":"Understanding the relative importance of heterosis and outbreeding depression over multiple generations is a key question in evolutionary biology and is essential for identifying appropriate genetic sources for population and ecosystem restoration. Here we use 2455 experimental crosses between 12 population pairs of the rare perennial plant Rutidosis leptorrhynchoides (Asteraceae) to investigate the multi-generational (F1, F2, F3) fitness outcomes of inter-population hybridization. We detected no evidence of outbreeding depression, with inter-population hybrids and backcrosses showing either similar fitness or significant heterosis for fitness components across the three generations. Variation in heterosis among population pairs was best explained by characteristics of the foreign source or home population, and was greatest when the source population was large, with high genetic diversity and low inbreeding, and the home population was small and inbred. Our results indicate that the primary consideration for maximizing progeny fitness following population augmentation or restoration is the use of seed from large, genetically diverse populations."}],"date_created":"2018-12-11T11:46:32Z","oa_version":"Submitted Version","type":"journal_article","volume":280,"main_file_link":[{"url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3574427/","open_access":"1"}],"publisher":"Royal Society, The","publication_status":"published","quality_controlled":"1","pmid":1,"department":[{"_id":"NiBa"}]},{"type":"journal_article","volume":7,"publisher":"Frontiers Research Foundation","publication_status":"published","quality_controlled":"1","department":[{"_id":"JoCs"}],"intvolume":"         7","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication":"Frontiers in Behavioral Neuroscience","publist_id":"7346","status":"public","date_published":"2013-12-27T00:00:00Z","abstract":[{"lang":"eng","text":"Maternal exposure to infection occurring mid-gestation produces a three-fold increase in the risk of schizophrenia in the offspring. The critical initiating factor appears to be the maternal immune activation (MIA) that follows infection. This process can be induced in rodents by exposure of pregnant dams to the viral mimic Poly I:C, which triggers an immune response that results in structural, functional, behavioral, and electrophysiological phenotypes in the adult offspring that model those seen in schizophrenia. We used this model to explore the role of synchronization in brain neural networks, a process thought to be dysfunctional in schizophrenia and previously associated with positive, negative, and cognitive symptoms of schizophrenia. Exposure of pregnant dams to Poly I:C on GD15 produced an impairment in long-range neural synchrony in adult offspring between two regions implicated in schizophrenia pathology; the hippocampus and the medial prefrontal cortex (mPFC). This reduction in synchrony was ameliorated by acute doses of the antipsychotic clozapine. MIA animals have previously been shown to have impaired pre-pulse inhibition (PPI), a gold-standard measure of schizophrenia-like deficits in animal models. Our data showed that deficits in synchrony were positively correlated with the impairments in PPI. Subsequent analysis of LFP activity during the PPI response also showed that reduced coupling between the mPFC and the hippocampus following processing of the pre-pulse was associated with reduced PPI. The ability of the MIA intervention to model neurodevelopmental aspects of schizophrenia pathology provides a useful platform from which to investigate the ontogeny of aberrant synchronous processes. Further, the way in which the model expresses translatable deficits such as aberrant synchrony and reduced PPI will allow researchers to explore novel intervention strategies targeted to these changes. "}],"date_created":"2018-12-11T11:46:41Z","oa_version":"Published Version","oa":1,"year":"2013","has_accepted_license":"1","date_updated":"2021-01-12T08:00:53Z","day":"27","doi":"10.3389/fnbeh.2013.00217","title":"Aberrant neural synchrony in the maternal immune activation model: Using translatable measures to explore targeted interventions","pubrep_id":"953","_id":"476","language":[{"iso":"eng"}],"issue":"DEC","ddc":["571"],"citation":{"ista":"Dickerson D, Bilkey D. 2013. Aberrant neural synchrony in the maternal immune activation model: Using translatable measures to explore targeted interventions. Frontiers in Behavioral Neuroscience. 7(DEC).","apa":"Dickerson, D., &#38; Bilkey, D. (2013). Aberrant neural synchrony in the maternal immune activation model: Using translatable measures to explore targeted interventions. <i>Frontiers in Behavioral Neuroscience</i>. Frontiers Research Foundation. <a href=\"https://doi.org/10.3389/fnbeh.2013.00217\">https://doi.org/10.3389/fnbeh.2013.00217</a>","ama":"Dickerson D, Bilkey D. Aberrant neural synchrony in the maternal immune activation model: Using translatable measures to explore targeted interventions. <i>Frontiers in Behavioral Neuroscience</i>. 2013;7(DEC). doi:<a href=\"https://doi.org/10.3389/fnbeh.2013.00217\">10.3389/fnbeh.2013.00217</a>","mla":"Dickerson, Desiree, and David Bilkey. “Aberrant Neural Synchrony in the Maternal Immune Activation Model: Using Translatable Measures to Explore Targeted Interventions.” <i>Frontiers in Behavioral Neuroscience</i>, vol. 7, no. DEC, Frontiers Research Foundation, 2013, doi:<a href=\"https://doi.org/10.3389/fnbeh.2013.00217\">10.3389/fnbeh.2013.00217</a>.","short":"D. Dickerson, D. Bilkey, Frontiers in Behavioral Neuroscience 7 (2013).","chicago":"Dickerson, Desiree, and David Bilkey. “Aberrant Neural Synchrony in the Maternal Immune Activation Model: Using Translatable Measures to Explore Targeted Interventions.” <i>Frontiers in Behavioral Neuroscience</i>. Frontiers Research Foundation, 2013. <a href=\"https://doi.org/10.3389/fnbeh.2013.00217\">https://doi.org/10.3389/fnbeh.2013.00217</a>.","ieee":"D. Dickerson and D. Bilkey, “Aberrant neural synchrony in the maternal immune activation model: Using translatable measures to explore targeted interventions,” <i>Frontiers in Behavioral Neuroscience</i>, vol. 7, no. DEC. Frontiers Research Foundation, 2013."},"author":[{"full_name":"Dickerson, Desiree","id":"444EB89E-F248-11E8-B48F-1D18A9856A87","first_name":"Desiree","last_name":"Dickerson"},{"full_name":"Bilkey, David","first_name":"David","last_name":"Bilkey"}],"file":[{"creator":"system","checksum":"cd7183121e56251176100ccac165c95c","relation":"main_file","file_name":"IST-2018-953-v1+1_2013_Dickerson_Aberrant_neural.pdf","content_type":"application/pdf","date_updated":"2020-07-14T12:46:35Z","date_created":"2018-12-12T10:15:10Z","access_level":"open_access","file_id":"5128","file_size":530134}],"file_date_updated":"2020-07-14T12:46:35Z","month":"12"},{"_id":"499","intvolume":"       339","language":[{"iso":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication":"Science","issue":"6115","publist_id":"7321","date_published":"2013-01-04T00:00:00Z","status":"public","page":"91 - 95","abstract":[{"text":"Exposure of an isogenic bacterial population to a cidal antibiotic typically fails to eliminate a small fraction of refractory cells. Historically, fractional killing has been attributed to infrequently dividing or nondividing &quot;persisters.&quot; Using microfluidic cultures and time-lapse microscopy, we found that Mycobacterium smegmatis persists by dividing in the presence of the drug isoniazid (INH). Although persistence in these studies was characterized by stable numbers of cells, this apparent stability was actually a dynamic state of balanced division and death. Single cells expressed catalase-peroxidase (KatG), which activates INH, in stochastic pulses that were negatively correlated with cell survival. These behaviors may reflect epigenetic effects, because KatG pulsing and death were correlated between sibling cells. Selection of lineages characterized by infrequent KatG pulsing could allow nonresponsive adaptation during prolonged drug exposure.","lang":"eng"}],"citation":{"ama":"Wakamoto Y, Dhar N, Chait RP, et al. Dynamic persistence of antibiotic-stressed mycobacteria. <i>Science</i>. 2013;339(6115):91-95. doi:<a href=\"https://doi.org/10.1126/science.1229858\">10.1126/science.1229858</a>","ista":"Wakamoto Y, Dhar N, Chait RP, Schneider K, Signorino Gelo F, Leibler S, Mckinney J. 2013. Dynamic persistence of antibiotic-stressed mycobacteria. Science. 339(6115), 91–95.","apa":"Wakamoto, Y., Dhar, N., Chait, R. P., Schneider, K., Signorino Gelo, F., Leibler, S., &#38; Mckinney, J. (2013). Dynamic persistence of antibiotic-stressed mycobacteria. <i>Science</i>. American Association for the Advancement of Science. <a href=\"https://doi.org/10.1126/science.1229858\">https://doi.org/10.1126/science.1229858</a>","chicago":"Wakamoto, Yurichi, Neraaj Dhar, Remy P Chait, Katrin Schneider, François Signorino Gelo, Stanislas Leibler, and John Mckinney. “Dynamic Persistence of Antibiotic-Stressed Mycobacteria.” <i>Science</i>. American Association for the Advancement of Science, 2013. <a href=\"https://doi.org/10.1126/science.1229858\">https://doi.org/10.1126/science.1229858</a>.","ieee":"Y. Wakamoto <i>et al.</i>, “Dynamic persistence of antibiotic-stressed mycobacteria,” <i>Science</i>, vol. 339, no. 6115. American Association for the Advancement of Science, pp. 91–95, 2013.","mla":"Wakamoto, Yurichi, et al. “Dynamic Persistence of Antibiotic-Stressed Mycobacteria.” <i>Science</i>, vol. 339, no. 6115, American Association for the Advancement of Science, 2013, pp. 91–95, doi:<a href=\"https://doi.org/10.1126/science.1229858\">10.1126/science.1229858</a>.","short":"Y. Wakamoto, N. Dhar, R.P. Chait, K. Schneider, F. Signorino Gelo, S. Leibler, J. Mckinney, Science 339 (2013) 91–95."},"date_created":"2018-12-11T11:46:48Z","scopus_import":1,"author":[{"first_name":"Yurichi","last_name":"Wakamoto","full_name":"Wakamoto, Yurichi"},{"full_name":"Dhar, Neraaj","last_name":"Dhar","first_name":"Neraaj"},{"orcid":"0000-0003-0876-3187","full_name":"Chait, Remy P","id":"3464AE84-F248-11E8-B48F-1D18A9856A87","first_name":"Remy P","last_name":"Chait"},{"full_name":"Schneider, Katrin","first_name":"Katrin","last_name":"Schneider"},{"last_name":"Signorino Gelo","first_name":"François","full_name":"Signorino Gelo, François"},{"full_name":"Leibler, Stanislas","first_name":"Stanislas","last_name":"Leibler"},{"full_name":"Mckinney, John","first_name":"John","last_name":"Mckinney"}],"oa_version":"None","month":"01","type":"journal_article","volume":339,"year":"2013","date_updated":"2021-01-12T08:01:06Z","publisher":"American Association for the Advancement of Science","day":"04","publication_status":"published","quality_controlled":"1","doi":"10.1126/science.1229858","title":"Dynamic persistence of antibiotic-stressed mycobacteria","department":[{"_id":"CaGu"},{"_id":"GaTk"}]},{"year":"2013","has_accepted_license":"1","oa":1,"title":"Evolutionary interactions between haemagglutinin and neuraminidase in avian influenza","doi":"10.1186/1471-2148-13-222","date_updated":"2021-01-12T08:01:08Z","day":"09","issue":"1","acknowledgement":"This work was supported by the Biotechnology and Biological Sciences Research Council, the Government of the Republic of Panama, the Interdisciplinary Centre for Human and Avian Influenza Research (www.ichair-flu.org) funded by the Scottish Funding Council, and the Institute for Science and Technology Austria.\r\nCC BY 2.0\r\n","pubrep_id":"941","_id":"500","language":[{"iso":"eng"}],"article_number":"222","month":"10","file_date_updated":"2020-07-14T12:46:36Z","author":[{"full_name":"Ward, Melissa","last_name":"Ward","first_name":"Melissa"},{"full_name":"Lycett, Samantha","first_name":"Samantha","last_name":"Lycett"},{"full_name":"Avila, Dorita","first_name":"Dorita","last_name":"Avila"},{"full_name":"Bollback, Jonathan P","orcid":"0000-0002-4624-4612","id":"2C6FA9CC-F248-11E8-B48F-1D18A9856A87","first_name":"Jonathan P","last_name":"Bollback"},{"full_name":"Leigh Brown, Andrew","first_name":"Andrew","last_name":"Leigh Brown"}],"file":[{"content_type":"application/pdf","relation":"main_file","file_name":"IST-2018-941-v1+1_2013_Bollback_Evolutionary_interactionspdf.pdf","checksum":"52cf48a7c1794676ae8b0029573a84a9","creator":"system","file_size":1150052,"file_id":"4722","access_level":"open_access","date_created":"2018-12-12T10:08:59Z","date_updated":"2020-07-14T12:46:36Z"}],"citation":{"short":"M. Ward, S. Lycett, D. Avila, J.P. Bollback, A. Leigh Brown, BMC Evolutionary Biology 13 (2013).","mla":"Ward, Melissa, et al. “Evolutionary Interactions between Haemagglutinin and Neuraminidase in Avian Influenza.” <i>BMC Evolutionary Biology</i>, vol. 13, no. 1, 222, BioMed Central, 2013, doi:<a href=\"https://doi.org/10.1186/1471-2148-13-222\">10.1186/1471-2148-13-222</a>.","chicago":"Ward, Melissa, Samantha Lycett, Dorita Avila, Jonathan P Bollback, and Andrew Leigh Brown. “Evolutionary Interactions between Haemagglutinin and Neuraminidase in Avian Influenza.” <i>BMC Evolutionary Biology</i>. BioMed Central, 2013. <a href=\"https://doi.org/10.1186/1471-2148-13-222\">https://doi.org/10.1186/1471-2148-13-222</a>.","ieee":"M. Ward, S. Lycett, D. Avila, J. P. Bollback, and A. Leigh Brown, “Evolutionary interactions between haemagglutinin and neuraminidase in avian influenza,” <i>BMC Evolutionary Biology</i>, vol. 13, no. 1. BioMed Central, 2013.","ista":"Ward M, Lycett S, Avila D, Bollback JP, Leigh Brown A. 2013. Evolutionary interactions between haemagglutinin and neuraminidase in avian influenza. BMC Evolutionary Biology. 13(1), 222.","apa":"Ward, M., Lycett, S., Avila, D., Bollback, J. P., &#38; Leigh Brown, A. (2013). Evolutionary interactions between haemagglutinin and neuraminidase in avian influenza. <i>BMC Evolutionary Biology</i>. BioMed Central. <a href=\"https://doi.org/10.1186/1471-2148-13-222\">https://doi.org/10.1186/1471-2148-13-222</a>","ama":"Ward M, Lycett S, Avila D, Bollback JP, Leigh Brown A. Evolutionary interactions between haemagglutinin and neuraminidase in avian influenza. <i>BMC Evolutionary Biology</i>. 2013;13(1). doi:<a href=\"https://doi.org/10.1186/1471-2148-13-222\">10.1186/1471-2148-13-222</a>"},"ddc":["576"],"volume":13,"type":"journal_article","quality_controlled":"1","department":[{"_id":"JoBo"}],"publisher":"BioMed Central","publication_status":"published","status":"public","date_published":"2013-10-09T00:00:00Z","publication":"BMC Evolutionary Biology","publist_id":"7320","abstract":[{"text":"Background: Reassortment between the RNA segments encoding haemagglutinin (HA) and neuraminidase (NA), the major antigenic influenza proteins, produces viruses with novel HA and NA subtype combinations and has preceded the emergence of pandemic strains. It has been suggested that productive viral infection requires a balance in the level of functional activity of HA and NA, arising from their closely interacting roles in the viral life cycle, and that this functional balance could be mediated by genetic changes in the HA and NA. Here, we investigate how the selective pressure varies for H7 avian influenza HA on different NA subtype backgrounds. Results: By extending Bayesian stochastic mutational mapping methods to calculate the ratio of the rate of non-synonymous change to the rate of synonymous change (d N/d S), we found the average d N/d S across the avian influenza H7 HA1 region to be significantly greater on an N2 NA subtype background than on an N1, N3 or N7 background. Observed differences in evolutionary rates of H7 HA on different NA subtype backgrounds could not be attributed to underlying differences between avian host species or virus pathogenicity. Examination of d N/d S values for each subtype on a site-by-site basis indicated that the elevated d N/d S on the N2 NA background was a result of increased selection, rather than a relaxation of selective constraint. Conclusions: Our results are consistent with the hypothesis that reassortment exposes influenza HA to significant changes in selective pressure through genetic interactions with NA. Such epistatic effects might be explicitly accounted for in future models of influenza evolution.","lang":"eng"}],"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"intvolume":"        13","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","date_created":"2018-12-11T11:46:49Z","scopus_import":1},{"department":[{"_id":"JoBo"}],"quality_controlled":"1","publication_status":"published","publisher":"Oxford University Press","volume":94,"type":"journal_article","oa_version":"Published Version","scopus_import":1,"date_created":"2018-12-11T11:46:49Z","abstract":[{"lang":"eng","text":"All known species of extant tapirs are allopatric: 1 in southeastern Asia and 3 in Central and South America. The fossil record for tapirs, however, is much wider in geographical range, including Europe, Asia, and North and South America, going back to the late Oligocene, making the present distribution a relict of the original one. We here describe a new species of living Tapirus from the Amazon rain forest, the 1st since T. bairdii Gill, 1865, and the 1st new Perissodactyla in more than 100 years, from both morphological and molecular characters. It is shorter in stature than T. terrestris (Linnaeus, 1758) and has distinctive skull morphology, and it is basal to the clade formed by T. terrestris and T. pinchaque (Roulin, 1829). This highlights the unrecognized biodiversity in western Amazonia, where the biota faces increasing threats. Local peoples have long recognized our new species, suggesting a key role for traditional knowledge in understanding the biodiversity of the region."}],"date_published":"2013-12-01T00:00:00Z","status":"public","publist_id":"7319","publication":"Journal of Mammalogy","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","tmp":{"image":"/images/cc_by_nc_nd.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","short":"CC BY-NC-ND (4.0)","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)"},"intvolume":"        94","title":"A new species of tapir from the Amazon","doi":"10.1644/12-MAMM-A-169.1","day":"01","date_updated":"2021-01-12T08:01:09Z","has_accepted_license":"1","year":"2013","oa":1,"file_date_updated":"2020-07-14T12:46:36Z","month":"12","author":[{"first_name":"Mario","last_name":"Cozzuol","full_name":"Cozzuol, Mario"},{"full_name":"Clozato, Camila","first_name":"Camila","last_name":"Clozato"},{"full_name":"Holanda, Elizete","last_name":"Holanda","first_name":"Elizete"},{"full_name":"Rodrigues, Flávio","last_name":"Rodrigues","first_name":"Flávio"},{"full_name":"Nienow, Samuel","last_name":"Nienow","first_name":"Samuel"},{"full_name":"De Thoisy, Benoit","first_name":"Benoit","last_name":"De Thoisy"},{"full_name":"Fernandes Redondo, Rodrigo A","orcid":"0000-0002-5837-2793","last_name":"Fernandes Redondo","first_name":"Rodrigo A","id":"409D5C96-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Santos","first_name":"Fabrício","full_name":"Santos, Fabrício"}],"file":[{"file_name":"IST-2018-940-v1+1_2013_Redondo_A_new.pdf","relation":"main_file","creator":"system","checksum":"8007815078dccac21ecd1cf73a269dc6","content_type":"application/pdf","access_level":"open_access","date_updated":"2020-07-14T12:46:36Z","date_created":"2018-12-12T10:12:59Z","file_size":1040765,"file_id":"4980"}],"citation":{"apa":"Cozzuol, M., Clozato, C., Holanda, E., Rodrigues, F., Nienow, S., De Thoisy, B., … Santos, F. (2013). A new species of tapir from the Amazon. <i>Journal of Mammalogy</i>. Oxford University Press. <a href=\"https://doi.org/10.1644/12-MAMM-A-169.1\">https://doi.org/10.1644/12-MAMM-A-169.1</a>","ista":"Cozzuol M, Clozato C, Holanda E, Rodrigues F, Nienow S, De Thoisy B, Fernandes Redondo RA, Santos F. 2013. A new species of tapir from the Amazon. Journal of Mammalogy. 94(6), 1331–1345.","ama":"Cozzuol M, Clozato C, Holanda E, et al. A new species of tapir from the Amazon. <i>Journal of Mammalogy</i>. 2013;94(6):1331-1345. doi:<a href=\"https://doi.org/10.1644/12-MAMM-A-169.1\">10.1644/12-MAMM-A-169.1</a>","mla":"Cozzuol, Mario, et al. “A New Species of Tapir from the Amazon.” <i>Journal of Mammalogy</i>, vol. 94, no. 6, Oxford University Press, 2013, pp. 1331–45, doi:<a href=\"https://doi.org/10.1644/12-MAMM-A-169.1\">10.1644/12-MAMM-A-169.1</a>.","short":"M. Cozzuol, C. Clozato, E. Holanda, F. Rodrigues, S. Nienow, B. De Thoisy, R.A. Fernandes Redondo, F. Santos, Journal of Mammalogy 94 (2013) 1331–1345.","ieee":"M. Cozzuol <i>et al.</i>, “A new species of tapir from the Amazon,” <i>Journal of Mammalogy</i>, vol. 94, no. 6. Oxford University Press, pp. 1331–1345, 2013.","chicago":"Cozzuol, Mario, Camila Clozato, Elizete Holanda, Flávio Rodrigues, Samuel Nienow, Benoit De Thoisy, Rodrigo A Fernandes Redondo, and Fabrício Santos. “A New Species of Tapir from the Amazon.” <i>Journal of Mammalogy</i>. Oxford University Press, 2013. <a href=\"https://doi.org/10.1644/12-MAMM-A-169.1\">https://doi.org/10.1644/12-MAMM-A-169.1</a>."},"ddc":["570"],"page":"1331 - 1345","issue":"6","_id":"501","language":[{"iso":"eng"}],"pubrep_id":"940"},{"day":"22","publication_status":"published","date_updated":"2021-01-12T08:01:09Z","publisher":"IOS Press","doi":"10.3233/JCS-130477","department":[{"_id":"KrPi"}],"title":"Short blind signatures","quality_controlled":"1","type":"journal_article","volume":21,"year":"2013","scopus_import":1,"date_created":"2018-12-11T11:46:50Z","citation":{"short":"O. Blazy, G. Fuchsbauer, D. Pointcheval, D. Vergnaud, Journal of Computer Security 21 (2013) 627–661.","mla":"Blazy, Olivier, et al. “Short Blind Signatures.” <i>Journal of Computer Security</i>, vol. 21, no. 5, IOS Press, 2013, pp. 627–61, doi:<a href=\"https://doi.org/10.3233/JCS-130477\">10.3233/JCS-130477</a>.","ieee":"O. Blazy, G. Fuchsbauer, D. Pointcheval, and D. Vergnaud, “Short blind signatures,” <i>Journal of Computer Security</i>, vol. 21, no. 5. IOS Press, pp. 627–661, 2013.","chicago":"Blazy, Olivier, Georg Fuchsbauer, David Pointcheval, and Damien Vergnaud. “Short Blind Signatures.” <i>Journal of Computer Security</i>. IOS Press, 2013. <a href=\"https://doi.org/10.3233/JCS-130477\">https://doi.org/10.3233/JCS-130477</a>.","apa":"Blazy, O., Fuchsbauer, G., Pointcheval, D., &#38; Vergnaud, D. (2013). Short blind signatures. <i>Journal of Computer Security</i>. IOS Press. <a href=\"https://doi.org/10.3233/JCS-130477\">https://doi.org/10.3233/JCS-130477</a>","ista":"Blazy O, Fuchsbauer G, Pointcheval D, Vergnaud D. 2013. Short blind signatures. Journal of Computer Security. 21(5), 627–661.","ama":"Blazy O, Fuchsbauer G, Pointcheval D, Vergnaud D. Short blind signatures. <i>Journal of Computer Security</i>. 2013;21(5):627-661. doi:<a href=\"https://doi.org/10.3233/JCS-130477\">10.3233/JCS-130477</a>"},"author":[{"last_name":"Blazy","first_name":"Olivier","full_name":"Blazy, Olivier"},{"full_name":"Fuchsbauer, Georg","last_name":"Fuchsbauer","first_name":"Georg","id":"46B4C3EE-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Pointcheval, David","last_name":"Pointcheval","first_name":"David"},{"full_name":"Vergnaud, Damien","first_name":"Damien","last_name":"Vergnaud"}],"oa_version":"None","month":"11","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"502","intvolume":"        21","language":[{"iso":"eng"}],"page":"627 - 661","abstract":[{"lang":"eng","text":"Blind signatures allow users to obtain signatures on messages hidden from the signer; moreover, the signer cannot link the resulting message/signature pair to the signing session. This paper presents blind signature schemes, in which the number of interactions between the user and the signer is minimal and whose blind signatures are short. Our schemes are defined over bilinear groups and are proved secure in the common-reference-string model without random oracles and under standard assumptions: CDH and the decision-linear assumption. (We also give variants over asymmetric groups based on similar assumptions.) The blind signatures are Waters signatures, which consist of 2 group elements. Moreover, we instantiate partially blind signatures, where the message consists of a part hidden from the signer and a commonly known public part, and schemes achieving perfect blindness. We propose new variants of blind signatures, such as signer-friendly partially blind signatures, where the public part can be chosen by the signer without prior agreement, 3-party blind signatures, as well as blind signatures on multiple aggregated messages provided by independent sources. We also extend Waters signatures to non-binary alphabets by proving a new result on the underlying hash function. "}],"issue":"5","publication":"Journal of Computer Security","publist_id":"7318","status":"public","date_published":"2013-11-22T00:00:00Z"},{"quality_controlled":"1","title":"Banning toxic heavy-metal catalysts from paints: Enzymatic cross-linking of alkyd resins","department":[{"_id":"HaJa"}],"doi":"10.1039/c2gc36666e","publisher":"Royal Society of Chemistry","date_updated":"2021-01-12T08:01:11Z","publication_status":"published","day":"01","year":"2013","volume":15,"type":"journal_article","month":"02","oa_version":"None","author":[{"full_name":"Greimel, Katrin","first_name":"Katrin","last_name":"Greimel"},{"full_name":"Perz, Veronika","first_name":"Veronika","last_name":"Perz"},{"full_name":"Koren, Klaus","first_name":"Klaus","last_name":"Koren","id":"382FBD6A-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Feola, Roland","last_name":"Feola","first_name":"Roland"},{"last_name":"Temel","first_name":"Armin","full_name":"Temel, Armin"},{"full_name":"Sohar, Christian","last_name":"Sohar","first_name":"Christian"},{"full_name":"Herrero Acero, Enrique","last_name":"Herrero Acero","first_name":"Enrique"},{"last_name":"Klimant","first_name":"Ingo","full_name":"Klimant, Ingo"},{"full_name":"Guebitz, Georg","last_name":"Guebitz","first_name":"Georg"}],"date_created":"2018-12-11T11:46:51Z","citation":{"mla":"Greimel, Katrin, et al. “Banning Toxic Heavy-Metal Catalysts from Paints: Enzymatic Cross-Linking of Alkyd Resins.” <i>Green Chemistry</i>, vol. 15, no. 2, Royal Society of Chemistry, 2013, pp. 381–88, doi:<a href=\"https://doi.org/10.1039/c2gc36666e\">10.1039/c2gc36666e</a>.","short":"K. Greimel, V. Perz, K. Koren, R. Feola, A. Temel, C. Sohar, E. Herrero Acero, I. Klimant, G. Guebitz, Green Chemistry 15 (2013) 381–388.","ieee":"K. Greimel <i>et al.</i>, “Banning toxic heavy-metal catalysts from paints: Enzymatic cross-linking of alkyd resins,” <i>Green Chemistry</i>, vol. 15, no. 2. Royal Society of Chemistry, pp. 381–388, 2013.","chicago":"Greimel, Katrin, Veronika Perz, Klaus Koren, Roland Feola, Armin Temel, Christian Sohar, Enrique Herrero Acero, Ingo Klimant, and Georg Guebitz. “Banning Toxic Heavy-Metal Catalysts from Paints: Enzymatic Cross-Linking of Alkyd Resins.” <i>Green Chemistry</i>. Royal Society of Chemistry, 2013. <a href=\"https://doi.org/10.1039/c2gc36666e\">https://doi.org/10.1039/c2gc36666e</a>.","apa":"Greimel, K., Perz, V., Koren, K., Feola, R., Temel, A., Sohar, C., … Guebitz, G. (2013). Banning toxic heavy-metal catalysts from paints: Enzymatic cross-linking of alkyd resins. <i>Green Chemistry</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/c2gc36666e\">https://doi.org/10.1039/c2gc36666e</a>","ista":"Greimel K, Perz V, Koren K, Feola R, Temel A, Sohar C, Herrero Acero E, Klimant I, Guebitz G. 2013. Banning toxic heavy-metal catalysts from paints: Enzymatic cross-linking of alkyd resins. Green Chemistry. 15(2), 381–388.","ama":"Greimel K, Perz V, Koren K, et al. Banning toxic heavy-metal catalysts from paints: Enzymatic cross-linking of alkyd resins. <i>Green Chemistry</i>. 2013;15(2):381-388. doi:<a href=\"https://doi.org/10.1039/c2gc36666e\">10.1039/c2gc36666e</a>"},"scopus_import":1,"date_published":"2013-02-01T00:00:00Z","status":"public","publist_id":"7313","issue":"2","publication":"Green Chemistry","abstract":[{"text":"Alkyd resins are polyesters containing unsaturated fatty acids that are used as binding agents in paints and coatings. Chemical drying of these polyesters is based on heavy metal catalyzed cross-linking of the unsaturated fatty acid moieties. Among the heavy-metal catalysts, cobalt complexes are the most effective, yet they have been proven to be carcinogenic. Therefore, strategies to replace the cobalt-based catalyst by environmentally friendlier and less toxic alternatives are under development. Here, we demonstrate for the first time that a laccase-mediator system can effectively replace the heavy-metal catalyst and cross-link alkyd resins. Interestingly, the biocatalytic reaction does not only work in aqueous media, but also in a solid film, where enzyme diffusion is limited. Within the catalytic cycle, the mediator oxidizes the alkyd resin and is regenerated by the laccase, which is uniformly distributed within the drying film as evidenced by confocal laser scanning microscopy. During gradual build-up of molecular weight, there is a concomitant decrease of the oxygen content in the film. A new optical sensor to follow oxygen consumption during the cross-linking reaction was developed and validated with state of the art techniques. A remarkable feature is the low sample amount required, which allows faster screening of new catalysts.","lang":"eng"}],"page":"381 - 388","acknowledgement":"This study was performed within the Austrian Centre of Indus-\r\ntrial Biotechnology ACIB and the COST Action 868. This work\r\nhas been supported by the Federal Ministry of Economy,\r\nFamily and Youth (BMWFJ), the Federal Ministry of Tra\r\nffi\r\nc,\r\nInnovation and Technology (bmvit), the Styrian Business\r\nPromotion Agency SFG, the Standortagentur Tirol and ZIT\r\n–\r\nTechnology  Agency  of  the  City  of  Vienna  through  the\r\nCOMET-Funding Program managed by the Austrian Research\r\nPromotion Agency FFG. Dr Massimiliano Cardinale (Institute of\r\nEnvironmental Biotechnology, TU Graz) is gratefully acknowl-\r\nedged for technical support with the CLSM measurements.","_id":"505","intvolume":"        15","language":[{"iso":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87"},{"publication":"Plant Cell","publist_id":"7312","status":"public","date_published":"2013-08-01T00:00:00Z","abstract":[{"text":"Fertilization in flowering plants requires the temporal and spatial coordination of many developmental processes, including pollen production, anther dehiscence, ovule production, and pollen tube elongation. However, it remains elusive as to how this coordination occurs during reproduction. Here, we present evidence that endocytosis, involving heterotetrameric adaptor protein complex 2 (AP-2), plays a crucial role in fertilization. An Arabidopsis thaliana mutant ap2m displays multiple defects in pollen production and viability, as well as elongation of staminal filaments and pollen tubes, all of which are pivotal processes needed for fertilization. Of these abnormalities, the defects in elongation of staminal filaments and pollen tubes were partially rescued by exogenous auxin. Moreover, DR5rev:GFP (for green fluorescent protein) expression was greatly reduced in filaments and anthers in ap2m mutant plants. At the cellular level, ap2m mutants displayed defects in both endocytosis of N-(3-triethylammonium-propyl)-4- (4-diethylaminophenylhexatrienyl) pyridinium dibromide, a lypophilic dye used as an endocytosis marker, and polar localization of auxin-efflux carrier PIN FORMED2 (PIN2) in the stamen filaments. Moreover, these defects were phenocopied by treatment with Tyrphostin A23, an inhibitor of endocytosis. Based on these results, we propose that AP-2-dependent endocytosis plays a crucial role in coordinating the multiple developmental aspects of male reproductive organs by modulating cellular auxin level through the regulation of the amount and polarity of PINs.","lang":"eng"}],"intvolume":"        25","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Submitted Version","date_created":"2018-12-11T11:46:52Z","scopus_import":1,"main_file_link":[{"open_access":"1","url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3784592/"}],"type":"journal_article","volume":25,"quality_controlled":"1","pmid":1,"department":[{"_id":"JiFr"}],"publisher":"American Society of Plant Biologists","publication_status":"published","issue":"8","page":"2970 - 2985","_id":"507","language":[{"iso":"eng"}],"author":[{"full_name":"Kim, Soo","last_name":"Kim","first_name":"Soo"},{"last_name":"Xu","first_name":"Zheng","full_name":"Xu, Zheng"},{"full_name":"Song, Kyungyoung","first_name":"Kyungyoung","last_name":"Song"},{"full_name":"Kim, Dae","last_name":"Kim","first_name":"Dae"},{"first_name":"Hyangju","last_name":"Kang","full_name":"Kang, Hyangju"},{"full_name":"Reichardt, Ilka","last_name":"Reichardt","first_name":"Ilka"},{"last_name":"Sohn","first_name":"Eun","full_name":"Sohn, Eun"},{"orcid":"0000-0002-8302-7596","full_name":"Friml, Jirí","last_name":"Friml","first_name":"Jirí","id":"4159519E-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Juergens","first_name":"Gerd","full_name":"Juergens, Gerd"},{"last_name":"Hwang","first_name":"Inhwan","full_name":"Hwang, Inhwan"}],"month":"08","citation":{"mla":"Kim, Soo, et al. “Adaptor Protein Complex 2-Mediated Endocytosis Is Crucial for Male Reproductive Organ Development in Arabidopsis.” <i>Plant Cell</i>, vol. 25, no. 8, American Society of Plant Biologists, 2013, pp. 2970–85, doi:<a href=\"https://doi.org/10.1105/tpc.113.114264\">10.1105/tpc.113.114264</a>.","short":"S. Kim, Z. Xu, K. Song, D. Kim, H. Kang, I. Reichardt, E. Sohn, J. Friml, G. Juergens, I. Hwang, Plant Cell 25 (2013) 2970–2985.","chicago":"Kim, Soo, Zheng Xu, Kyungyoung Song, Dae Kim, Hyangju Kang, Ilka Reichardt, Eun Sohn, Jiří Friml, Gerd Juergens, and Inhwan Hwang. “Adaptor Protein Complex 2-Mediated Endocytosis Is Crucial for Male Reproductive Organ Development in Arabidopsis.” <i>Plant Cell</i>. American Society of Plant Biologists, 2013. <a href=\"https://doi.org/10.1105/tpc.113.114264\">https://doi.org/10.1105/tpc.113.114264</a>.","ieee":"S. Kim <i>et al.</i>, “Adaptor protein complex 2-mediated endocytosis is crucial for male reproductive organ development in arabidopsis,” <i>Plant Cell</i>, vol. 25, no. 8. American Society of Plant Biologists, pp. 2970–2985, 2013.","ista":"Kim S, Xu Z, Song K, Kim D, Kang H, Reichardt I, Sohn E, Friml J, Juergens G, Hwang I. 2013. Adaptor protein complex 2-mediated endocytosis is crucial for male reproductive organ development in arabidopsis. Plant Cell. 25(8), 2970–2985.","apa":"Kim, S., Xu, Z., Song, K., Kim, D., Kang, H., Reichardt, I., … Hwang, I. (2013). Adaptor protein complex 2-mediated endocytosis is crucial for male reproductive organ development in arabidopsis. <i>Plant Cell</i>. American Society of Plant Biologists. <a href=\"https://doi.org/10.1105/tpc.113.114264\">https://doi.org/10.1105/tpc.113.114264</a>","ama":"Kim S, Xu Z, Song K, et al. Adaptor protein complex 2-mediated endocytosis is crucial for male reproductive organ development in arabidopsis. <i>Plant Cell</i>. 2013;25(8):2970-2985. doi:<a href=\"https://doi.org/10.1105/tpc.113.114264\">10.1105/tpc.113.114264</a>"},"year":"2013","oa":1,"external_id":{"pmid":["23975898"]},"doi":"10.1105/tpc.113.114264","title":"Adaptor protein complex 2-mediated endocytosis is crucial for male reproductive organ development in arabidopsis","date_updated":"2021-01-12T08:01:12Z","day":"01"},{"type":"journal_article","volume":30,"main_file_link":[{"open_access":"1","url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3748357/"}],"publisher":"Oxford University Press","publication_status":"published","quality_controlled":"1","pmid":1,"department":[{"_id":"JoBo"}],"intvolume":"        30","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publist_id":"7310","publication":"Molecular Biology and Evolution","status":"public","date_published":"2013-09-01T00:00:00Z","abstract":[{"text":"The phagocyte NADPH oxidase catalyzes the reduction of O2 to reactive oxygen species with microbicidal activity. It is composed of two membrane-spanning subunits, gp91-phox and p22-phox (encoded by CYBB and CYBA, respectively), and three cytoplasmic subunits, p40-phox, p47-phox, and p67-phox (encoded by NCF4, NCF1, and NCF2, respectively). Mutations in any of these genes can result in chronic granulomatous disease, a primary immunodeficiency characterized by recurrent infections. Using evolutionary mapping, we determined that episodes of adaptive natural selection have shaped the extracellular portion of gp91-phox during the evolution of mammals, which suggests that this region may have a function in host-pathogen interactions. On the basis of a resequencing analysis of approximately 35 kb of CYBB, CYBA, NCF2, and NCF4 in 102 ethnically diverse individuals (24 of African ancestry, 31 of European ancestry, 24 of Asian/Oceanians, and 23 US Hispanics), we show that the pattern of CYBA diversity is compatible with balancing natural selection, perhaps mediated by catalase-positive pathogens. NCF2 in Asian populations shows a pattern of diversity characterized by a differentiated haplotype structure. Our study provides insight into the role of pathogen-driven natural selection in an innate immune pathway and sheds light on the role of CYBA in endothelial, nonphagocytic NADPH oxidases, which are relevant in the pathogenesis of cardiovascular and other complex diseases.","lang":"eng"}],"date_created":"2018-12-11T11:46:52Z","scopus_import":1,"oa_version":"Submitted Version","oa":1,"year":"2013","date_updated":"2021-01-12T08:01:12Z","day":"01","external_id":{"pmid":["23821607"]},"doi":"10.1093/molbev/mst119","title":"Evolutionary dynamics of the human NADPH oxidase genes CYBB, CYBA, NCF2, and NCF4: Functional implications","language":[{"iso":"eng"}],"_id":"508","issue":"9","page":"2157 - 2167","citation":{"ama":"Tarazona Santos E, Machado M, Magalhães W, et al. Evolutionary dynamics of the human NADPH oxidase genes CYBB, CYBA, NCF2, and NCF4: Functional implications. <i>Molecular Biology and Evolution</i>. 2013;30(9):2157-2167. doi:<a href=\"https://doi.org/10.1093/molbev/mst119\">10.1093/molbev/mst119</a>","apa":"Tarazona Santos, E., Machado, M., Magalhães, W., Chen, R., Lyon, F., Burdett, L., … Chanock, S. (2013). Evolutionary dynamics of the human NADPH oxidase genes CYBB, CYBA, NCF2, and NCF4: Functional implications. <i>Molecular Biology and Evolution</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/molbev/mst119\">https://doi.org/10.1093/molbev/mst119</a>","ista":"Tarazona Santos E, Machado M, Magalhães W, Chen R, Lyon F, Burdett L, Crenshaw A, Fabbri C, Pereira L, Pinto L, Fernandes Redondo RA, Sestanovich B, Yeager M, Chanock S. 2013. Evolutionary dynamics of the human NADPH oxidase genes CYBB, CYBA, NCF2, and NCF4: Functional implications. Molecular Biology and Evolution. 30(9), 2157–2167.","ieee":"E. Tarazona Santos <i>et al.</i>, “Evolutionary dynamics of the human NADPH oxidase genes CYBB, CYBA, NCF2, and NCF4: Functional implications,” <i>Molecular Biology and Evolution</i>, vol. 30, no. 9. Oxford University Press, pp. 2157–2167, 2013.","chicago":"Tarazona Santos, Eduardo, Moara Machado, Wagner Magalhães, Renee Chen, Fernanda Lyon, Laurie Burdett, Andrew Crenshaw, et al. “Evolutionary Dynamics of the Human NADPH Oxidase Genes CYBB, CYBA, NCF2, and NCF4: Functional Implications.” <i>Molecular Biology and Evolution</i>. Oxford University Press, 2013. <a href=\"https://doi.org/10.1093/molbev/mst119\">https://doi.org/10.1093/molbev/mst119</a>.","mla":"Tarazona Santos, Eduardo, et al. “Evolutionary Dynamics of the Human NADPH Oxidase Genes CYBB, CYBA, NCF2, and NCF4: Functional Implications.” <i>Molecular Biology and Evolution</i>, vol. 30, no. 9, Oxford University Press, 2013, pp. 2157–67, doi:<a href=\"https://doi.org/10.1093/molbev/mst119\">10.1093/molbev/mst119</a>.","short":"E. Tarazona Santos, M. Machado, W. Magalhães, R. Chen, F. Lyon, L. Burdett, A. Crenshaw, C. Fabbri, L. Pereira, L. Pinto, R.A. Fernandes Redondo, B. Sestanovich, M. Yeager, S. Chanock, Molecular Biology and Evolution 30 (2013) 2157–2167."},"author":[{"full_name":"Tarazona Santos, Eduardo","last_name":"Tarazona Santos","first_name":"Eduardo"},{"first_name":"Moara","last_name":"Machado","full_name":"Machado, Moara"},{"first_name":"Wagner","last_name":"Magalhães","full_name":"Magalhães, Wagner"},{"full_name":"Chen, Renee","first_name":"Renee","last_name":"Chen"},{"first_name":"Fernanda","last_name":"Lyon","full_name":"Lyon, Fernanda"},{"last_name":"Burdett","first_name":"Laurie","full_name":"Burdett, Laurie"},{"first_name":"Andrew","last_name":"Crenshaw","full_name":"Crenshaw, Andrew"},{"last_name":"Fabbri","first_name":"Cristina","full_name":"Fabbri, Cristina"},{"full_name":"Pereira, Latife","last_name":"Pereira","first_name":"Latife"},{"full_name":"Pinto, Laelia","first_name":"Laelia","last_name":"Pinto"},{"last_name":"Fernandes Redondo","first_name":"Rodrigo A","id":"409D5C96-F248-11E8-B48F-1D18A9856A87","full_name":"Fernandes Redondo, Rodrigo A","orcid":"0000-0002-5837-2793"},{"first_name":"Ben","last_name":"Sestanovich","full_name":"Sestanovich, Ben"},{"first_name":"Meredith","last_name":"Yeager","full_name":"Yeager, Meredith"},{"full_name":"Chanock, Stephen","last_name":"Chanock","first_name":"Stephen"}],"month":"09"},{"abstract":[{"text":"Clathrin-mediated endocytosis (CME) regulates many aspects of plant development, including hormone signaling and responses to environmental stresses. Despite the importance of this process, the machinery that regulates CME in plants is largely unknown. In mammals, the heterotetrameric ADAPTOR PROTEIN COMPLEX-2 (AP-2) is required for the formation of clathrin-coated vesicles at the plasma membrane (PM). Although the existence of AP-2 has been predicted in Arabidopsis thaliana, the biochemistry and functionality of the complex is still uncharacterized. Here, we identified all the subunits of the Arabidopsis AP-2 by tandem affinity purification and found that one of the large AP-2 subunits, AP2A1, localized at the PM and interacted with clathrin. Furthermore, endocytosis of the leucine-rich repeat receptor kinase, BRASSINOSTEROID INSENSITIVE1 (BRI1), was shown to depend on AP-2. Knockdown of the two Arabidopsis AP2A genes or overexpression of a dominant-negative version of the medium AP-2 subunit, AP2M, impaired BRI1 endocytosis and enhanced the brassinosteroid signaling. Our data reveal that the CME machinery in Arabidopsis is evolutionarily conserved and that AP-2 functions in receptormediated endocytosis. ","lang":"eng"}],"publist_id":"7311","publication":"Plant Cell","date_published":"2013-08-01T00:00:00Z","status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","intvolume":"        25","oa_version":"Submitted Version","scopus_import":1,"date_created":"2018-12-11T11:46:52Z","main_file_link":[{"url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3784593/","open_access":"1"}],"type":"journal_article","volume":25,"department":[{"_id":"JiFr"}],"quality_controlled":"1","pmid":1,"publication_status":"published","publisher":"American Society of Plant Biologists","page":"2986 - 2997","issue":"8","language":[{"iso":"eng"}],"_id":"509","author":[{"first_name":"Simone","last_name":"Di Rubbo","full_name":"Di Rubbo, Simone"},{"full_name":"Irani, Niloufer","last_name":"Irani","first_name":"Niloufer"},{"last_name":"Kim","first_name":"Soo","full_name":"Kim, Soo"},{"last_name":"Xu","first_name":"Zheng","full_name":"Xu, Zheng"},{"last_name":"Gadeyne","first_name":"Astrid","full_name":"Gadeyne, Astrid"},{"last_name":"Dejonghe","first_name":"Wim","full_name":"Dejonghe, Wim"},{"last_name":"Vanhoutte","first_name":"Isabelle","full_name":"Vanhoutte, Isabelle"},{"full_name":"Persiau, Geert","last_name":"Persiau","first_name":"Geert"},{"first_name":"Dominique","last_name":"Eeckhout","full_name":"Eeckhout, Dominique"},{"first_name":"Sibu","last_name":"Simon","id":"4542EF9A-F248-11E8-B48F-1D18A9856A87","full_name":"Simon, Sibu","orcid":"0000-0002-1998-6741"},{"first_name":"Kyungyoung","last_name":"Song","full_name":"Song, Kyungyoung"},{"full_name":"Kleine Vehn, Jürgen","last_name":"Kleine Vehn","first_name":"Jürgen"},{"orcid":"0000-0002-8302-7596","full_name":"Friml, Jirí","first_name":"Jirí","last_name":"Friml","id":"4159519E-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Geert","last_name":"De Jaeger","full_name":"De Jaeger, Geert"},{"last_name":"Van Damme","first_name":"Daniël","full_name":"Van Damme, Daniël"},{"full_name":"Hwang, Inhwan","first_name":"Inhwan","last_name":"Hwang"},{"last_name":"Russinova","first_name":"Eugenia","full_name":"Russinova, Eugenia"}],"month":"08","citation":{"ama":"Di Rubbo S, Irani N, Kim S, et al. The clathrin adaptor complex AP-2 mediates endocytosis of brassinosteroid INSENSITIVE1 in arabidopsis. <i>Plant Cell</i>. 2013;25(8):2986-2997. doi:<a href=\"https://doi.org/10.1105/tpc.113.114058\">10.1105/tpc.113.114058</a>","apa":"Di Rubbo, S., Irani, N., Kim, S., Xu, Z., Gadeyne, A., Dejonghe, W., … Russinova, E. (2013). The clathrin adaptor complex AP-2 mediates endocytosis of brassinosteroid INSENSITIVE1 in arabidopsis. <i>Plant Cell</i>. American Society of Plant Biologists. <a href=\"https://doi.org/10.1105/tpc.113.114058\">https://doi.org/10.1105/tpc.113.114058</a>","ista":"Di Rubbo S, Irani N, Kim S, Xu Z, Gadeyne A, Dejonghe W, Vanhoutte I, Persiau G, Eeckhout D, Simon S, Song K, Kleine Vehn J, Friml J, De Jaeger G, Van Damme D, Hwang I, Russinova E. 2013. The clathrin adaptor complex AP-2 mediates endocytosis of brassinosteroid INSENSITIVE1 in arabidopsis. Plant Cell. 25(8), 2986–2997.","ieee":"S. Di Rubbo <i>et al.</i>, “The clathrin adaptor complex AP-2 mediates endocytosis of brassinosteroid INSENSITIVE1 in arabidopsis,” <i>Plant Cell</i>, vol. 25, no. 8. American Society of Plant Biologists, pp. 2986–2997, 2013.","chicago":"Di Rubbo, Simone, Niloufer Irani, Soo Kim, Zheng Xu, Astrid Gadeyne, Wim Dejonghe, Isabelle Vanhoutte, et al. “The Clathrin Adaptor Complex AP-2 Mediates Endocytosis of Brassinosteroid INSENSITIVE1 in Arabidopsis.” <i>Plant Cell</i>. American Society of Plant Biologists, 2013. <a href=\"https://doi.org/10.1105/tpc.113.114058\">https://doi.org/10.1105/tpc.113.114058</a>.","short":"S. Di Rubbo, N. Irani, S. Kim, Z. Xu, A. Gadeyne, W. Dejonghe, I. Vanhoutte, G. Persiau, D. Eeckhout, S. Simon, K. Song, J. Kleine Vehn, J. Friml, G. De Jaeger, D. Van Damme, I. Hwang, E. Russinova, Plant Cell 25 (2013) 2986–2997.","mla":"Di Rubbo, Simone, et al. “The Clathrin Adaptor Complex AP-2 Mediates Endocytosis of Brassinosteroid INSENSITIVE1 in Arabidopsis.” <i>Plant Cell</i>, vol. 25, no. 8, American Society of Plant Biologists, 2013, pp. 2986–97, doi:<a href=\"https://doi.org/10.1105/tpc.113.114058\">10.1105/tpc.113.114058</a>."},"year":"2013","oa":1,"doi":"10.1105/tpc.113.114058","title":"The clathrin adaptor complex AP-2 mediates endocytosis of brassinosteroid INSENSITIVE1 in arabidopsis","external_id":{"pmid":["23975899"]},"day":"01","date_updated":"2021-01-12T08:01:13Z"},{"oa":1,"year":"2013","date_updated":"2021-01-12T08:01:15Z","day":"01","external_id":{"pmid":["24163311"]},"doi":"10.1105/tpc.113.114421","title":"Regulation of auxin homeostasis and gradients in Arabidopsis roots through the formation of the indole-3-acetic acid catabolite 2-oxindole-3-acetic acid","language":[{"iso":"eng"}],"_id":"511","issue":"10","page":"3858 - 3870","citation":{"mla":"Pěnčík, Aleš, et al. “Regulation of Auxin Homeostasis and Gradients in Arabidopsis Roots through the Formation of the Indole-3-Acetic Acid Catabolite 2-Oxindole-3-Acetic Acid.” <i>Plant Cell</i>, vol. 25, no. 10, American Society of Plant Biologists, 2013, pp. 3858–70, doi:<a href=\"https://doi.org/10.1105/tpc.113.114421\">10.1105/tpc.113.114421</a>.","short":"A. Pěnčík, B. Simonovik, S. Petersson, E. Henyková, S. Simon, K. Greenham, Y. Zhang, M. Kowalczyk, M. Estelle, E. Zažímalová, O. Novák, G. Sandberg, K. Ljung, Plant Cell 25 (2013) 3858–3870.","ieee":"A. Pěnčík <i>et al.</i>, “Regulation of auxin homeostasis and gradients in Arabidopsis roots through the formation of the indole-3-acetic acid catabolite 2-oxindole-3-acetic acid,” <i>Plant Cell</i>, vol. 25, no. 10. American Society of Plant Biologists, pp. 3858–3870, 2013.","chicago":"Pěnčík, Aleš, Biljana Simonovik, Sara Petersson, Eva Henyková, Sibu Simon, Kathleen Greenham, Yi Zhang, et al. “Regulation of Auxin Homeostasis and Gradients in Arabidopsis Roots through the Formation of the Indole-3-Acetic Acid Catabolite 2-Oxindole-3-Acetic Acid.” <i>Plant Cell</i>. American Society of Plant Biologists, 2013. <a href=\"https://doi.org/10.1105/tpc.113.114421\">https://doi.org/10.1105/tpc.113.114421</a>.","apa":"Pěnčík, A., Simonovik, B., Petersson, S., Henyková, E., Simon, S., Greenham, K., … Ljung, K. (2013). Regulation of auxin homeostasis and gradients in Arabidopsis roots through the formation of the indole-3-acetic acid catabolite 2-oxindole-3-acetic acid. <i>Plant Cell</i>. American Society of Plant Biologists. <a href=\"https://doi.org/10.1105/tpc.113.114421\">https://doi.org/10.1105/tpc.113.114421</a>","ista":"Pěnčík A, Simonovik B, Petersson S, Henyková E, Simon S, Greenham K, Zhang Y, Kowalczyk M, Estelle M, Zažímalová E, Novák O, Sandberg G, Ljung K. 2013. Regulation of auxin homeostasis and gradients in Arabidopsis roots through the formation of the indole-3-acetic acid catabolite 2-oxindole-3-acetic acid. Plant Cell. 25(10), 3858–3870.","ama":"Pěnčík A, Simonovik B, Petersson S, et al. Regulation of auxin homeostasis and gradients in Arabidopsis roots through the formation of the indole-3-acetic acid catabolite 2-oxindole-3-acetic acid. <i>Plant Cell</i>. 2013;25(10):3858-3870. doi:<a href=\"https://doi.org/10.1105/tpc.113.114421\">10.1105/tpc.113.114421</a>"},"author":[{"full_name":"Pěnčík, Aleš","last_name":"Pěnčík","first_name":"Aleš"},{"full_name":"Simonovik, Biljana","first_name":"Biljana","last_name":"Simonovik"},{"first_name":"Sara","last_name":"Petersson","full_name":"Petersson, Sara"},{"full_name":"Henyková, Eva","last_name":"Henyková","first_name":"Eva"},{"id":"4542EF9A-F248-11E8-B48F-1D18A9856A87","last_name":"Simon","first_name":"Sibu","full_name":"Simon, Sibu","orcid":"0000-0002-1998-6741"},{"full_name":"Greenham, Kathleen","last_name":"Greenham","first_name":"Kathleen"},{"last_name":"Zhang","first_name":"Yi","full_name":"Zhang, Yi"},{"full_name":"Kowalczyk, Mariusz","first_name":"Mariusz","last_name":"Kowalczyk"},{"full_name":"Estelle, Mark","last_name":"Estelle","first_name":"Mark"},{"last_name":"Zažímalová","first_name":"Eva","full_name":"Zažímalová, Eva"},{"full_name":"Novák, Ondřej","last_name":"Novák","first_name":"Ondřej"},{"full_name":"Sandberg, Göran","last_name":"Sandberg","first_name":"Göran"},{"first_name":"Karin","last_name":"Ljung","full_name":"Ljung, Karin"}],"month":"10","type":"journal_article","volume":25,"main_file_link":[{"open_access":"1","url":"www.doi.org/10.1105/tpc.113.114421"}],"publisher":"American Society of Plant Biologists","publication_status":"published","quality_controlled":"1","pmid":1,"department":[{"_id":"JiFr"}],"intvolume":"        25","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication":"Plant Cell","publist_id":"7309","date_published":"2013-10-01T00:00:00Z","status":"public","abstract":[{"lang":"eng","text":"The native auxin, indole-3-acetic acid (IAA), is a major regulator of plant growth and development. Its nonuniform distribution between cells and tissues underlies the spatiotemporal coordination of many developmental events and responses to environmental stimuli. The regulation of auxin gradients and the formation of auxin maxima/minima most likely involve the regulation of both metabolic and transport processes. In this article, we have demonstrated that 2-oxindole-3-acetic acid (oxIAA) is a major primary IAA catabolite formed in Arabidopsis thaliana root tissues. OxIAA had little biological activity and was formed rapidly and irreversibly in response to increases in auxin levels. We further showed that there is cell type-specific regulation of oxIAA levels in the Arabidopsis root apex. We propose that oxIAA is an important element in the regulation of output from auxin gradients and, therefore, in the regulation of auxin homeostasis and response mechanisms."}],"date_created":"2018-12-11T11:46:53Z","scopus_import":1,"oa_version":"Published Version"},{"title":"A map of cell type‐specific auxin responses","doi":"10.1038/msb.2013.40","day":"10","date_updated":"2021-01-12T08:01:17Z","has_accepted_license":"1","year":"2013","oa":1,"article_processing_charge":"No","file_date_updated":"2020-07-14T12:46:36Z","article_number":"688","month":"09","file":[{"content_type":"application/pdf","file_name":"IST-2018-936-v1+1_2008_Barton_A_map.pdf","relation":"main_file","creator":"system","checksum":"9c4fbe793af4bb22b3fe50cc677a39bf","file_size":3257692,"file_id":"4644","access_level":"open_access","date_created":"2018-12-12T10:07:46Z","date_updated":"2020-07-14T12:46:36Z"}],"author":[{"first_name":"Bastiaan","last_name":"Bargmann","full_name":"Bargmann, Bastiaan"},{"first_name":"Steffen","last_name":"Vanneste","full_name":"Vanneste, Steffen"},{"last_name":"Krouk","first_name":"Gabriel","full_name":"Krouk, Gabriel"},{"last_name":"Nawy","first_name":"Tal","full_name":"Nawy, Tal"},{"full_name":"Efroni, Idan","first_name":"Idan","last_name":"Efroni"},{"last_name":"Shani","first_name":"Eilon","full_name":"Shani, Eilon"},{"last_name":"Choe","first_name":"Goh","full_name":"Choe, Goh"},{"id":"4159519E-F248-11E8-B48F-1D18A9856A87","last_name":"Friml","first_name":"Jirí","orcid":"0000-0002-8302-7596","full_name":"Friml, Jirí"},{"last_name":"Bergmann","first_name":"Dominique","full_name":"Bergmann, Dominique"},{"full_name":"Estelle, Mark","first_name":"Mark","last_name":"Estelle"},{"full_name":"Birnbaum, Kenneth","last_name":"Birnbaum","first_name":"Kenneth"}],"citation":{"mla":"Bargmann, Bastiaan, et al. “A Map of Cell Type‐specific Auxin Responses.” <i>Molecular Systems Biology</i>, vol. 9, no. 1, 688, Nature Publishing Group, 2013, doi:<a href=\"https://doi.org/10.1038/msb.2013.40\">10.1038/msb.2013.40</a>.","short":"B. Bargmann, S. Vanneste, G. Krouk, T. Nawy, I. Efroni, E. Shani, G. Choe, J. Friml, D. Bergmann, M. Estelle, K. Birnbaum, Molecular Systems Biology 9 (2013).","ieee":"B. Bargmann <i>et al.</i>, “A map of cell type‐specific auxin responses,” <i>Molecular Systems Biology</i>, vol. 9, no. 1. Nature Publishing Group, 2013.","chicago":"Bargmann, Bastiaan, Steffen Vanneste, Gabriel Krouk, Tal Nawy, Idan Efroni, Eilon Shani, Goh Choe, et al. “A Map of Cell Type‐specific Auxin Responses.” <i>Molecular Systems Biology</i>. Nature Publishing Group, 2013. <a href=\"https://doi.org/10.1038/msb.2013.40\">https://doi.org/10.1038/msb.2013.40</a>.","apa":"Bargmann, B., Vanneste, S., Krouk, G., Nawy, T., Efroni, I., Shani, E., … Birnbaum, K. (2013). A map of cell type‐specific auxin responses. <i>Molecular Systems Biology</i>. Nature Publishing Group. <a href=\"https://doi.org/10.1038/msb.2013.40\">https://doi.org/10.1038/msb.2013.40</a>","ista":"Bargmann B, Vanneste S, Krouk G, Nawy T, Efroni I, Shani E, Choe G, Friml J, Bergmann D, Estelle M, Birnbaum K. 2013. A map of cell type‐specific auxin responses. Molecular Systems Biology. 9(1), 688.","ama":"Bargmann B, Vanneste S, Krouk G, et al. A map of cell type‐specific auxin responses. <i>Molecular Systems Biology</i>. 2013;9(1). doi:<a href=\"https://doi.org/10.1038/msb.2013.40\">10.1038/msb.2013.40</a>"},"ddc":["581"],"issue":"1","_id":"516","pubrep_id":"936","language":[{"iso":"eng"}],"department":[{"_id":"JiFr"}],"quality_controlled":"1","publication_status":"published","publisher":"Nature Publishing Group","volume":9,"type":"journal_article","oa_version":"Published Version","scopus_import":1,"date_created":"2018-12-11T11:46:55Z","abstract":[{"lang":"eng","text":"In plants, changes in local auxin concentrations can trigger a range of developmental processes as distinct tissues respond differently to the same auxin stimulus. However, little is known about how auxin is interpreted by individual cell types. We performed a transcriptomic analysis of responses to auxin within four distinct tissues of the Arabidopsis thaliana root and demonstrate that different cell types show competence for discrete responses. The majority of auxin‐responsive genes displayed a spatial bias in their induction or repression. The novel data set was used to examine how auxin influences tissue‐specific transcriptional regulation of cell‐identity markers. Additionally, the data were used in combination with spatial expression maps of the root to plot a transcriptomic auxin‐response gradient across the apical and basal meristem. The readout revealed a strong correlation for thousands of genes between the relative response to auxin and expression along the longitudinal axis of the root. This data set and comparative analysis provide a transcriptome‐level spatial breakdown of the response to auxin within an organ where this hormone mediates many aspects of development."}],"status":"public","date_published":"2013-09-10T00:00:00Z","publist_id":"7303","publication":"Molecular Systems Biology","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","tmp":{"image":"/images/cc_by_nc_sa.png","name":"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode","short":"CC BY-NC-SA (4.0)"},"intvolume":"         9"}]