[{"year":"2014","department":[{"_id":"RoSe"}],"publisher":"World Scientific Publishing","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","publication":"Proceedings of the QMath12 Conference","_id":"1516","abstract":[{"lang":"eng","text":"We present a rigorous derivation of the BCS gap equation for superfluid fermionic gases with point interactions. Our starting point is the BCS energy functional, whose minimizer we investigate in the limit when the range of the interaction potential goes to zero.\r\n"}],"date_updated":"2021-01-12T06:51:19Z","day":"01","type":"conference","month":"01","oa_version":"Preprint","page":"127 - 137","author":[{"full_name":"Bräunlich, Gerhard","first_name":"Gerhard","last_name":"Bräunlich"},{"full_name":"Hainzl, Christian","first_name":"Christian","last_name":"Hainzl"},{"full_name":"Seiringer, Robert","orcid":"0000-0002-6781-0521","id":"4AFD0470-F248-11E8-B48F-1D18A9856A87","first_name":"Robert","last_name":"Seiringer"}],"date_created":"2018-12-11T11:52:28Z","publist_id":"5661","arxiv":1,"title":"On the BCS gap equation for superfluid fermionic gases","status":"public","external_id":{"arxiv":["1403.2563"]},"language":[{"iso":"eng"}],"citation":{"short":"G. Bräunlich, C. Hainzl, R. Seiringer, in:, Proceedings of the QMath12 Conference, World Scientific Publishing, 2014, pp. 127–137.","chicago":"Bräunlich, Gerhard, Christian Hainzl, and Robert Seiringer. “On the BCS Gap Equation for Superfluid Fermionic Gases.” In <i>Proceedings of the QMath12 Conference</i>, 127–37. World Scientific Publishing, 2014. <a href=\"https://doi.org/10.1142/9789814618144_0007\">https://doi.org/10.1142/9789814618144_0007</a>.","ieee":"G. Bräunlich, C. Hainzl, and R. Seiringer, “On the BCS gap equation for superfluid fermionic gases,” in <i>Proceedings of the QMath12 Conference</i>, Berlin, Germany, 2014, pp. 127–137.","apa":"Bräunlich, G., Hainzl, C., &#38; Seiringer, R. (2014). On the BCS gap equation for superfluid fermionic gases. In <i>Proceedings of the QMath12 Conference</i> (pp. 127–137). Berlin, Germany: World Scientific Publishing. <a href=\"https://doi.org/10.1142/9789814618144_0007\">https://doi.org/10.1142/9789814618144_0007</a>","mla":"Bräunlich, Gerhard, et al. “On the BCS Gap Equation for Superfluid Fermionic Gases.” <i>Proceedings of the QMath12 Conference</i>, World Scientific Publishing, 2014, pp. 127–37, doi:<a href=\"https://doi.org/10.1142/9789814618144_0007\">10.1142/9789814618144_0007</a>.","ista":"Bräunlich G, Hainzl C, Seiringer R. 2014. On the BCS gap equation for superfluid fermionic gases. Proceedings of the QMath12 Conference. QMath: Mathematical Results in Quantum Physics, 127–137.","ama":"Bräunlich G, Hainzl C, Seiringer R. On the BCS gap equation for superfluid fermionic gases. In: <i>Proceedings of the QMath12 Conference</i>. World Scientific Publishing; 2014:127-137. doi:<a href=\"https://doi.org/10.1142/9789814618144_0007\">10.1142/9789814618144_0007</a>"},"conference":{"name":"QMath: Mathematical Results in Quantum Physics","location":"Berlin, Germany","start_date":"2013-09-10","end_date":"2013-09-13"},"oa":1,"publication_status":"published","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1403.2563"}],"quality_controlled":"1","doi":"10.1142/9789814618144_0007","date_published":"2014-01-01T00:00:00Z"},{"publication_status":"published","quality_controlled":0,"doi":"10.1007/s00030-013-0235-0","date_published":"2014-01-01T00:00:00Z","status":"public","citation":{"apa":"Fischer, J. L. (2014). Infinite speed of support propagation for the Derrida-Lebowitz-Speer-Spohn equation and quantum drift-diffusion models. <i>Nonlinear Differential Equations and Applications</i>. Birkhäuser. <a href=\"https://doi.org/10.1007/s00030-013-0235-0\">https://doi.org/10.1007/s00030-013-0235-0</a>","ista":"Fischer JL. 2014. Infinite speed of support propagation for the Derrida-Lebowitz-Speer-Spohn equation and quantum drift-diffusion models. Nonlinear Differential Equations and Applications. 21(1), 27–50.","mla":"Fischer, Julian L. “Infinite Speed of Support Propagation for the Derrida-Lebowitz-Speer-Spohn Equation and Quantum Drift-Diffusion Models.” <i>Nonlinear Differential Equations and Applications</i>, vol. 21, no. 1, Birkhäuser, 2014, pp. 27–50, doi:<a href=\"https://doi.org/10.1007/s00030-013-0235-0\">10.1007/s00030-013-0235-0</a>.","ama":"Fischer JL. Infinite speed of support propagation for the Derrida-Lebowitz-Speer-Spohn equation and quantum drift-diffusion models. <i>Nonlinear Differential Equations and Applications</i>. 2014;21(1):27-50. doi:<a href=\"https://doi.org/10.1007/s00030-013-0235-0\">10.1007/s00030-013-0235-0</a>","short":"J.L. Fischer, Nonlinear Differential Equations and Applications 21 (2014) 27–50.","chicago":"Fischer, Julian L. “Infinite Speed of Support Propagation for the Derrida-Lebowitz-Speer-Spohn Equation and Quantum Drift-Diffusion Models.” <i>Nonlinear Differential Equations and Applications</i>. Birkhäuser, 2014. <a href=\"https://doi.org/10.1007/s00030-013-0235-0\">https://doi.org/10.1007/s00030-013-0235-0</a>.","ieee":"J. L. Fischer, “Infinite speed of support propagation for the Derrida-Lebowitz-Speer-Spohn equation and quantum drift-diffusion models,” <i>Nonlinear Differential Equations and Applications</i>, vol. 21, no. 1. Birkhäuser, pp. 27–50, 2014."},"issue":"1","intvolume":"        21","extern":1,"date_updated":"2021-01-12T06:49:47Z","day":"01","abstract":[{"lang":"eng","text":"We show that weak solutions of the Derrida-Lebowitz-Speer-Spohn (DLSS) equation display infinite speed of support propagation. We apply our method to the case of the quantum drift-diffusion equation which augments the DLSS equation with a drift term and possibly a second-order diffusion term. The proof is accomplished using weighted entropy estimates, Hardy's inequality and a family of singular weight functions to derive a differential inequality; the differential inequality shows exponential growth of the weighted entropy, with the growth constant blowing up very fast as the singularity of the weight becomes sharper. To the best of our knowledge, this is the first example of a nonnegativity-preserving higher-order parabolic equation displaying infinite speed of support propagation."}],"month":"01","type":"journal_article","page":"27 - 50","author":[{"full_name":"Julian Fischer","id":"2C12A0B0-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-0479-558X","last_name":"Fischer","first_name":"Julian L"}],"date_created":"2018-12-11T11:51:17Z","publist_id":"5960","title":"Infinite speed of support propagation for the Derrida-Lebowitz-Speer-Spohn equation and quantum drift-diffusion models","volume":21,"year":"2014","publisher":"Birkhäuser","publication":"Nonlinear Differential Equations and Applications","_id":"1309"},{"citation":{"ama":"Fischer JL. Upper bounds on waiting times for the Thin-film equation: The case of weak slippage. <i>Archive for Rational Mechanics and Analysis</i>. 2014;211(3):771-818. doi:<a href=\"https://doi.org/10.1007/s00205-013-0690-0\">10.1007/s00205-013-0690-0</a>","apa":"Fischer, J. L. (2014). Upper bounds on waiting times for the Thin-film equation: The case of weak slippage. <i>Archive for Rational Mechanics and Analysis</i>. Springer. <a href=\"https://doi.org/10.1007/s00205-013-0690-0\">https://doi.org/10.1007/s00205-013-0690-0</a>","mla":"Fischer, Julian L. “Upper Bounds on Waiting Times for the Thin-Film Equation: The Case of Weak Slippage.” <i>Archive for Rational Mechanics and Analysis</i>, vol. 211, no. 3, Springer, 2014, pp. 771–818, doi:<a href=\"https://doi.org/10.1007/s00205-013-0690-0\">10.1007/s00205-013-0690-0</a>.","ista":"Fischer JL. 2014. Upper bounds on waiting times for the Thin-film equation: The case of weak slippage. Archive for Rational Mechanics and Analysis. 211(3), 771–818.","chicago":"Fischer, Julian L. “Upper Bounds on Waiting Times for the Thin-Film Equation: The Case of Weak Slippage.” <i>Archive for Rational Mechanics and Analysis</i>. Springer, 2014. <a href=\"https://doi.org/10.1007/s00205-013-0690-0\">https://doi.org/10.1007/s00205-013-0690-0</a>.","ieee":"J. L. Fischer, “Upper bounds on waiting times for the Thin-film equation: The case of weak slippage,” <i>Archive for Rational Mechanics and Analysis</i>, vol. 211, no. 3. Springer, pp. 771–818, 2014.","short":"J.L. Fischer, Archive for Rational Mechanics and Analysis 211 (2014) 771–818."},"issue":"3","intvolume":"       211","extern":1,"status":"public","quality_controlled":0,"date_published":"2014-01-01T00:00:00Z","doi":"10.1007/s00205-013-0690-0","publication_status":"published","publication":"Archive for Rational Mechanics and Analysis","_id":"1312","year":"2014","publisher":"Springer","publist_id":"5959","date_created":"2018-12-11T11:51:18Z","title":"Upper bounds on waiting times for the Thin-film equation: The case of weak slippage","volume":211,"day":"01","abstract":[{"lang":"eng","text":"We derive upper bounds on the waiting time of solutions to the thin-film equation in the regime of weak slippage n ∈ [2, 32\\11). In particular, we give sufficient conditions on the initial data for instantaneous forward motion of the free boundary. For n ∈ (2, 32\\11), our estimates are sharp, for n = 2, they are sharp up to a logarithmic correction term. Note that the case n = 2 corresponds-with a grain of salt-to the assumption of the Navier slip condition at the fluid-solid interface. We also obtain results in the regime of strong slippage n ∈ (1,2); however, in this regime we expect them not to be optimal. Our method is based on weighted backward entropy estimates, Hardy's inequality and singular weight functions; we deduce a differential inequality which would enforce blowup of the weighted entropy if the contact line were to remain stationary for too long."}],"date_updated":"2021-01-12T06:49:48Z","type":"journal_article","month":"01","page":"771 - 818","author":[{"id":"2C12A0B0-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-0479-558X","full_name":"Julian Fischer","first_name":"Julian L","last_name":"Fischer"}]},{"status":"public","external_id":{"pmid":["25474733"]},"intvolume":"         8","extern":"1","citation":{"ama":"Kundu PK, Klajn R. Watching single molecules move in response to light. <i>ACS Nano</i>. 2014;8(12):11913-11916. doi:<a href=\"https://doi.org/10.1021/nn506656r\">10.1021/nn506656r</a>","apa":"Kundu, P. K., &#38; Klajn, R. (2014). Watching single molecules move in response to light. <i>ACS Nano</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/nn506656r\">https://doi.org/10.1021/nn506656r</a>","mla":"Kundu, Pintu K., and Rafal Klajn. “Watching Single Molecules Move in Response to Light.” <i>ACS Nano</i>, vol. 8, no. 12, American Chemical Society, 2014, pp. 11913–16, doi:<a href=\"https://doi.org/10.1021/nn506656r\">10.1021/nn506656r</a>.","ista":"Kundu PK, Klajn R. 2014. Watching single molecules move in response to light. ACS Nano. 8(12), 11913–11916.","chicago":"Kundu, Pintu K., and Rafal Klajn. “Watching Single Molecules Move in Response to Light.” <i>ACS Nano</i>. American Chemical Society, 2014. <a href=\"https://doi.org/10.1021/nn506656r\">https://doi.org/10.1021/nn506656r</a>.","ieee":"P. K. Kundu and R. Klajn, “Watching single molecules move in response to light,” <i>ACS Nano</i>, vol. 8, no. 12. American Chemical Society, pp. 11913–11916, 2014.","short":"P.K. Kundu, R. Klajn, ACS Nano 8 (2014) 11913–11916."},"publication_status":"published","date_published":"2014-12-23T00:00:00Z","year":"2014","_id":"13399","page":"11913-11916","oa_version":"None","type":"journal_article","month":"12","abstract":[{"lang":"eng","text":"Nature has long inspired scientists with its seemingly unlimited ability to harness solar energy and to utilize it to drive various physiological processes. With the help of man-made molecular photoswitches, we now have the potential to outperform natural systems in many ways, with the ultimate goal of fabricating multifunctional materials that operate at different light wavelengths. An important challenge in developing light-controlled artificial molecular machines lies in attaining a detailed understanding of the photoisomerization-coupled conformational changes that occur in macromolecules and molecular assemblies. In this issue of ACS Nano, Bléger, Rabe, and co-workers use force microscopy to provide interesting insights into the behavior of individual photoresponsive molecules and to identify contraction, extension, and crawling events accompanying light-induced isomerization."}],"date_updated":"2023-08-08T07:18:58Z","volume":8,"date_created":"2023-08-01T09:45:42Z","keyword":["General Physics and Astronomy","General Engineering","General Materials Science"],"issue":"12","language":[{"iso":"eng"}],"publication_identifier":{"eissn":["1936-086X"],"issn":["1936-0851"]},"doi":"10.1021/nn506656r","quality_controlled":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publisher":"American Chemical Society","pmid":1,"publication":"ACS Nano","article_type":"original","scopus_import":"1","article_processing_charge":"No","author":[{"last_name":"Kundu","first_name":"Pintu K.","full_name":"Kundu, Pintu K."},{"last_name":"Klajn","first_name":"Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","full_name":"Klajn, Rafal"}],"day":"23","title":"Watching single molecules move in response to light"},{"pmid":1,"publisher":"American Association for the Advancement of Science","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_type":"original","article_processing_charge":"No","scopus_import":"1","publication":"Science","day":"24","author":[{"full_name":"Singh, Gurvinder","last_name":"Singh","first_name":"Gurvinder"},{"full_name":"Chan, Henry","last_name":"Chan","first_name":"Henry"},{"first_name":"Artem","last_name":"Baskin","full_name":"Baskin, Artem"},{"first_name":"Elijah","last_name":"Gelman","full_name":"Gelman, Elijah"},{"first_name":"Nikita","last_name":"Repnin","full_name":"Repnin, Nikita"},{"full_name":"Král, Petr","first_name":"Petr","last_name":"Král"},{"full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","last_name":"Klajn","first_name":"Rafal"}],"title":"Self-assembly of magnetite nanocubes into helical superstructures","issue":"6201","language":[{"iso":"eng"}],"keyword":["Multidisciplinary"],"publication_identifier":{"eissn":["1095-9203"],"issn":["0036-8075"]},"quality_controlled":"1","doi":"10.1126/science.1254132","year":"2014","_id":"13400","month":"07","type":"journal_article","oa_version":"None","abstract":[{"lang":"eng","text":"Organizing inorganic nanocrystals into complex architectures is challenging and typically relies on preexisting templates, such as properly folded DNA or polypeptide chains. We found that under carefully controlled conditions, cubic nanocrystals of magnetite self-assemble into arrays of helical superstructures in a template-free manner with >99% yield. Computer simulations revealed that the formation of helices is determined by the interplay of van der Waals and magnetic dipole-dipole interactions, Zeeman coupling, and entropic forces and can be attributed to spontaneous formation of chiral nanocube clusters. Neighboring helices within their densely packed ensembles tended to adopt the same handedness in order to maximize packing, thus revealing a novel mechanism of symmetry breaking and chirality amplification."}],"date_updated":"2023-08-08T07:23:05Z","page":"1149-1153","date_created":"2023-08-01T09:45:56Z","volume":345,"external_id":{"pmid":["25061133"]},"status":"public","citation":{"ama":"Singh G, Chan H, Baskin A, et al. Self-assembly of magnetite nanocubes into helical superstructures. <i>Science</i>. 2014;345(6201):1149-1153. doi:<a href=\"https://doi.org/10.1126/science.1254132\">10.1126/science.1254132</a>","apa":"Singh, G., Chan, H., Baskin, A., Gelman, E., Repnin, N., Král, P., &#38; Klajn, R. (2014). Self-assembly of magnetite nanocubes into helical superstructures. <i>Science</i>. American Association for the Advancement of Science. <a href=\"https://doi.org/10.1126/science.1254132\">https://doi.org/10.1126/science.1254132</a>","ista":"Singh G, Chan H, Baskin A, Gelman E, Repnin N, Král P, Klajn R. 2014. Self-assembly of magnetite nanocubes into helical superstructures. Science. 345(6201), 1149–1153.","mla":"Singh, Gurvinder, et al. “Self-Assembly of Magnetite Nanocubes into Helical Superstructures.” <i>Science</i>, vol. 345, no. 6201, American Association for the Advancement of Science, 2014, pp. 1149–53, doi:<a href=\"https://doi.org/10.1126/science.1254132\">10.1126/science.1254132</a>.","chicago":"Singh, Gurvinder, Henry Chan, Artem Baskin, Elijah Gelman, Nikita Repnin, Petr Král, and Rafal Klajn. “Self-Assembly of Magnetite Nanocubes into Helical Superstructures.” <i>Science</i>. American Association for the Advancement of Science, 2014. <a href=\"https://doi.org/10.1126/science.1254132\">https://doi.org/10.1126/science.1254132</a>.","ieee":"G. Singh <i>et al.</i>, “Self-assembly of magnetite nanocubes into helical superstructures,” <i>Science</i>, vol. 345, no. 6201. American Association for the Advancement of Science, pp. 1149–1153, 2014.","short":"G. Singh, H. Chan, A. Baskin, E. Gelman, N. Repnin, P. Král, R. Klajn, Science 345 (2014) 1149–1153."},"intvolume":"       345","extern":"1","publication_status":"published","date_published":"2014-07-24T00:00:00Z"},{"page":"11276-11279","type":"journal_article","month":"08","oa_version":"None","abstract":[{"lang":"eng","text":"A compound combining the features of a molecular rotor and a photoswitch was synthesized and was shown to exist as three diastereomers, which interconvert via a reversible cyclic reaction scheme. Each of the three diastereomers was isolated, and by following the equilibration kinetics, activation barriers for all reactions were calculated. The results indicate that the properties of molecular switches depend heavily on their immediate chemical environment. The conclusions are important in the context of designing new switchable molecules and materials."}],"date_updated":"2023-08-08T07:25:37Z","volume":136,"date_created":"2023-08-01T09:46:12Z","year":"2014","_id":"13401","publication_status":"published","date_published":"2014-08-13T00:00:00Z","status":"public","external_id":{"pmid":["25072292"]},"intvolume":"       136","extern":"1","citation":{"ama":"Kundu PK, Lerner A, Kučanda K, Leitus G, Klajn R. Cyclic kinetics during thermal equilibration of an axially chiral bis-spiropyran. <i>Journal of the American Chemical Society</i>. 2014;136(32):11276-11279. doi:<a href=\"https://doi.org/10.1021/ja505948q\">10.1021/ja505948q</a>","apa":"Kundu, P. K., Lerner, A., Kučanda, K., Leitus, G., &#38; Klajn, R. (2014). Cyclic kinetics during thermal equilibration of an axially chiral bis-spiropyran. <i>Journal of the American Chemical Society</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/ja505948q\">https://doi.org/10.1021/ja505948q</a>","mla":"Kundu, Pintu K., et al. “Cyclic Kinetics during Thermal Equilibration of an Axially Chiral Bis-Spiropyran.” <i>Journal of the American Chemical Society</i>, vol. 136, no. 32, American Chemical Society, 2014, pp. 11276–79, doi:<a href=\"https://doi.org/10.1021/ja505948q\">10.1021/ja505948q</a>.","ista":"Kundu PK, Lerner A, Kučanda K, Leitus G, Klajn R. 2014. Cyclic kinetics during thermal equilibration of an axially chiral bis-spiropyran. Journal of the American Chemical Society. 136(32), 11276–11279.","chicago":"Kundu, Pintu K., Avishai Lerner, Kristina Kučanda, Gregory Leitus, and Rafal Klajn. “Cyclic Kinetics during Thermal Equilibration of an Axially Chiral Bis-Spiropyran.” <i>Journal of the American Chemical Society</i>. American Chemical Society, 2014. <a href=\"https://doi.org/10.1021/ja505948q\">https://doi.org/10.1021/ja505948q</a>.","ieee":"P. K. Kundu, A. Lerner, K. Kučanda, G. Leitus, and R. Klajn, “Cyclic kinetics during thermal equilibration of an axially chiral bis-spiropyran,” <i>Journal of the American Chemical Society</i>, vol. 136, no. 32. American Chemical Society, pp. 11276–11279, 2014.","short":"P.K. Kundu, A. Lerner, K. Kučanda, G. Leitus, R. Klajn, Journal of the American Chemical Society 136 (2014) 11276–11279."},"author":[{"last_name":"Kundu","first_name":"Pintu K.","full_name":"Kundu, Pintu K."},{"first_name":"Avishai","last_name":"Lerner","full_name":"Lerner, Avishai"},{"full_name":"Kučanda, Kristina","first_name":"Kristina","last_name":"Kučanda"},{"last_name":"Leitus","first_name":"Gregory","full_name":"Leitus, Gregory"},{"last_name":"Klajn","first_name":"Rafal","full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b"}],"day":"13","title":"Cyclic kinetics during thermal equilibration of an axially chiral bis-spiropyran","publisher":"American Chemical Society","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","pmid":1,"publication":"Journal of the American Chemical Society","article_type":"original","scopus_import":"1","article_processing_charge":"No","publication_identifier":{"eissn":["1520-5126"],"issn":["0002-7863"]},"doi":"10.1021/ja505948q","quality_controlled":"1","keyword":["Colloid and Surface Chemistry","Biochemistry","General Chemistry","Catalysis"],"issue":"32","language":[{"iso":"eng"}]},{"_id":"13402","year":"2014","volume":5,"date_created":"2023-08-01T09:46:27Z","type":"journal_article","oa_version":"Published Version","month":"04","abstract":[{"lang":"eng","text":"Nanoporous frameworks are polymeric materials built from rigid molecules, which give rise to their nanoporous structures with applications in gas sorption and storage, catalysis and others. Conceptually new applications could emerge, should these beneficial properties be manipulated by external stimuli in a reversible manner. One approach to render nanoporous frameworks responsive to external signals would be to immobilize molecular switches within their nanopores. Although the majority of molecular switches require conformational freedom to isomerize, and switching in the solid state is prohibited, the nanopores may provide enough room for the switches to efficiently isomerize. Here we describe two families of nanoporous materials incorporating the spiropyran molecular switch. These materials exhibit a variety of interesting properties, including reversible photochromism and acidochromism under solvent-free conditions, light-controlled capture and release of metal ions, as well reversible chromism induced by solvation/desolvation."}],"date_updated":"2023-08-08T07:28:10Z","intvolume":"         5","extern":"1","citation":{"ama":"Kundu PK, Olsen GL, Kiss V, Klajn R. Nanoporous frameworks exhibiting multiple stimuli responsiveness. <i>Nature Communications</i>. 2014;5. doi:<a href=\"https://doi.org/10.1038/ncomms4588\">10.1038/ncomms4588</a>","mla":"Kundu, Pintu K., et al. “Nanoporous Frameworks Exhibiting Multiple Stimuli Responsiveness.” <i>Nature Communications</i>, vol. 5, 3588, Springer Nature, 2014, doi:<a href=\"https://doi.org/10.1038/ncomms4588\">10.1038/ncomms4588</a>.","ista":"Kundu PK, Olsen GL, Kiss V, Klajn R. 2014. Nanoporous frameworks exhibiting multiple stimuli responsiveness. Nature Communications. 5, 3588.","apa":"Kundu, P. K., Olsen, G. L., Kiss, V., &#38; Klajn, R. (2014). Nanoporous frameworks exhibiting multiple stimuli responsiveness. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/ncomms4588\">https://doi.org/10.1038/ncomms4588</a>","ieee":"P. K. Kundu, G. L. Olsen, V. Kiss, and R. Klajn, “Nanoporous frameworks exhibiting multiple stimuli responsiveness,” <i>Nature Communications</i>, vol. 5. Springer Nature, 2014.","chicago":"Kundu, Pintu K., Gregory L. Olsen, Vladimir Kiss, and Rafal Klajn. “Nanoporous Frameworks Exhibiting Multiple Stimuli Responsiveness.” <i>Nature Communications</i>. Springer Nature, 2014. <a href=\"https://doi.org/10.1038/ncomms4588\">https://doi.org/10.1038/ncomms4588</a>.","short":"P.K. Kundu, G.L. Olsen, V. Kiss, R. Klajn, Nature Communications 5 (2014)."},"external_id":{"pmid":["24709950"]},"status":"public","date_published":"2014-04-07T00:00:00Z","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1038/ncomms4588"}],"publication_status":"published","oa":1,"publication":"Nature Communications","article_type":"original","scopus_import":"1","article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publisher":"Springer Nature","pmid":1,"article_number":"3588","title":"Nanoporous frameworks exhibiting multiple stimuli responsiveness","author":[{"full_name":"Kundu, Pintu K.","first_name":"Pintu K.","last_name":"Kundu"},{"full_name":"Olsen, Gregory L.","first_name":"Gregory L.","last_name":"Olsen"},{"full_name":"Kiss, Vladimir","last_name":"Kiss","first_name":"Vladimir"},{"first_name":"Rafal","last_name":"Klajn","full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b"}],"day":"07","keyword":["General Physics and Astronomy","General Biochemistry","Genetics and Molecular Biology","General Chemistry","Multidisciplinary"],"language":[{"iso":"eng"}],"doi":"10.1038/ncomms4588","quality_controlled":"1","publication_identifier":{"eissn":["2041-1723"]}},{"_id":"13403","year":"2014","volume":136,"date_created":"2023-08-01T09:46:44Z","page":"2711-2714","abstract":[{"text":"We show that bimolecular reactions between species confined to the surfaces of nanoparticles can be manipulated by the nature of the linker, as well as by the curvature of the underlying particles.","lang":"eng"}],"date_updated":"2023-08-08T07:32:11Z","oa_version":"None","type":"journal_article","month":"02","intvolume":"       136","extern":"1","citation":{"ieee":"T. Zdobinsky, P. Sankar Maiti, and R. Klajn, “Support curvature and conformational freedom control chemical reactivity of immobilized species,” <i>Journal of the American Chemical Society</i>, vol. 136, no. 7. American Chemical Society, pp. 2711–2714, 2014.","chicago":"Zdobinsky, Tino, Pradipta Sankar Maiti, and Rafal Klajn. “Support Curvature and Conformational Freedom Control Chemical Reactivity of Immobilized Species.” <i>Journal of the American Chemical Society</i>. American Chemical Society, 2014. <a href=\"https://doi.org/10.1021/ja411573a\">https://doi.org/10.1021/ja411573a</a>.","short":"T. Zdobinsky, P. Sankar Maiti, R. Klajn, Journal of the American Chemical Society 136 (2014) 2711–2714.","ama":"Zdobinsky T, Sankar Maiti P, Klajn R. Support curvature and conformational freedom control chemical reactivity of immobilized species. <i>Journal of the American Chemical Society</i>. 2014;136(7):2711-2714. doi:<a href=\"https://doi.org/10.1021/ja411573a\">10.1021/ja411573a</a>","ista":"Zdobinsky T, Sankar Maiti P, Klajn R. 2014. Support curvature and conformational freedom control chemical reactivity of immobilized species. Journal of the American Chemical Society. 136(7), 2711–2714.","mla":"Zdobinsky, Tino, et al. “Support Curvature and Conformational Freedom Control Chemical Reactivity of Immobilized Species.” <i>Journal of the American Chemical Society</i>, vol. 136, no. 7, American Chemical Society, 2014, pp. 2711–14, doi:<a href=\"https://doi.org/10.1021/ja411573a\">10.1021/ja411573a</a>.","apa":"Zdobinsky, T., Sankar Maiti, P., &#38; Klajn, R. (2014). Support curvature and conformational freedom control chemical reactivity of immobilized species. <i>Journal of the American Chemical Society</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/ja411573a\">https://doi.org/10.1021/ja411573a</a>"},"status":"public","external_id":{"pmid":["24320557"]},"date_published":"2014-02-19T00:00:00Z","publication_status":"published","publication":"Journal of the American Chemical Society","article_processing_charge":"No","scopus_import":"1","article_type":"original","publisher":"American Chemical Society","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","pmid":1,"title":"Support curvature and conformational freedom control chemical reactivity of immobilized species","author":[{"first_name":"Tino","last_name":"Zdobinsky","full_name":"Zdobinsky, Tino"},{"first_name":"Pradipta","last_name":"Sankar Maiti","full_name":"Sankar Maiti, Pradipta"},{"id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","full_name":"Klajn, Rafal","last_name":"Klajn","first_name":"Rafal"}],"day":"19","keyword":["Colloid and Surface Chemistry","Biochemistry","General Chemistry","Catalysis"],"language":[{"iso":"eng"}],"issue":"7","doi":"10.1021/ja411573a","quality_controlled":"1","publication_identifier":{"eissn":["1520-5126"],"issn":["0002-7863"]}},{"date_published":"2014-01-27T00:00:00Z","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1039/C3CS60181A"}],"publication_status":"published","oa":1,"intvolume":"        43","extern":"1","citation":{"short":"R. Klajn, Chemical Society Reviews 43 (2014) 148–184.","chicago":"Klajn, Rafal. “Spiropyran-Based Dynamic Materials.” <i>Chemical Society Reviews</i>. Royal Society of Chemistry, 2014. <a href=\"https://doi.org/10.1039/c3cs60181a\">https://doi.org/10.1039/c3cs60181a</a>.","ieee":"R. Klajn, “Spiropyran-based dynamic materials,” <i>Chemical Society Reviews</i>, vol. 43, no. 1. Royal Society of Chemistry, pp. 148–184, 2014.","apa":"Klajn, R. (2014). Spiropyran-based dynamic materials. <i>Chemical Society Reviews</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/c3cs60181a\">https://doi.org/10.1039/c3cs60181a</a>","ista":"Klajn R. 2014. Spiropyran-based dynamic materials. Chemical Society Reviews. 43(1), 148–184.","mla":"Klajn, Rafal. “Spiropyran-Based Dynamic Materials.” <i>Chemical Society Reviews</i>, vol. 43, no. 1, Royal Society of Chemistry, 2014, pp. 148–84, doi:<a href=\"https://doi.org/10.1039/c3cs60181a\">10.1039/c3cs60181a</a>.","ama":"Klajn R. Spiropyran-based dynamic materials. <i>Chemical Society Reviews</i>. 2014;43(1):148-184. doi:<a href=\"https://doi.org/10.1039/c3cs60181a\">10.1039/c3cs60181a</a>"},"external_id":{"pmid":["23979515"]},"status":"public","volume":43,"date_created":"2023-08-01T09:47:03Z","page":"148-184","oa_version":"Published Version","type":"journal_article","month":"01","date_updated":"2023-08-08T07:41:38Z","abstract":[{"lang":"eng","text":"In the past few years, spiropyran has emerged as the molecule-of-choice for the construction of novel dynamic materials. This unique molecular switch undergoes structural isomerisation in response to a variety of orthogonal stimuli, e.g. light, temperature, metal ions, redox potential, and mechanical stress. Incorporation of this switch onto macromolecular supports or inorganic scaffolds allows for the creation of robust dynamic materials. This review discusses the synthesis, switching conditions, and use of dynamic materials in which spiropyran has been attached to the surfaces of polymers, biomacromolecules, inorganic nanoparticles, as well as solid surfaces. The resulting materials show fascinating properties whereby the state of the switch intimately affects a multitude of useful properties of the support. The utility of the spiropyran switch will undoubtedly endow these materials with far-reaching applications in the near future."}],"_id":"13404","year":"2014","doi":"10.1039/c3cs60181a","quality_controlled":"1","publication_identifier":{"eissn":["1460-4744"],"issn":["0306-0012"]},"keyword":["General Chemistry"],"issue":"1","language":[{"iso":"eng"}],"title":"Spiropyran-based dynamic materials","author":[{"first_name":"Rafal","last_name":"Klajn","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","full_name":"Klajn, Rafal"}],"day":"27","publication":"Chemical Society Reviews","article_type":"original","article_processing_charge":"No","scopus_import":"1","publisher":"Royal Society of Chemistry","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","pmid":1},{"citation":{"ieee":"K. Chatterjee, M. H. Henzinger, S. Krinninger, V. Loitzenbauer, and M. Raskin, “Approximating the minimum cycle mean,” <i>Theoretical Computer Science</i>, vol. 547, no. C. Elsevier, pp. 104–116, 2014.","chicago":"Chatterjee, Krishnendu, Monika H Henzinger, Sebastian Krinninger, Veronika Loitzenbauer, and Michael Raskin. “Approximating the Minimum Cycle Mean.” <i>Theoretical Computer Science</i>. Elsevier, 2014. <a href=\"https://doi.org/10.1016/j.tcs.2014.06.031\">https://doi.org/10.1016/j.tcs.2014.06.031</a>.","short":"K. Chatterjee, M.H. Henzinger, S. Krinninger, V. Loitzenbauer, M. Raskin, Theoretical Computer Science 547 (2014) 104–116.","ama":"Chatterjee K, Henzinger MH, Krinninger S, Loitzenbauer V, Raskin M. Approximating the minimum cycle mean. <i>Theoretical Computer Science</i>. 2014;547(C):104-116. doi:<a href=\"https://doi.org/10.1016/j.tcs.2014.06.031\">10.1016/j.tcs.2014.06.031</a>","mla":"Chatterjee, Krishnendu, et al. “Approximating the Minimum Cycle Mean.” <i>Theoretical Computer Science</i>, vol. 547, no. C, Elsevier, 2014, pp. 104–16, doi:<a href=\"https://doi.org/10.1016/j.tcs.2014.06.031\">10.1016/j.tcs.2014.06.031</a>.","ista":"Chatterjee K, Henzinger MH, Krinninger S, Loitzenbauer V, Raskin M. 2014. Approximating the minimum cycle mean. Theoretical Computer Science. 547(C), 104–116.","apa":"Chatterjee, K., Henzinger, M. H., Krinninger, S., Loitzenbauer, V., &#38; Raskin, M. (2014). Approximating the minimum cycle mean. <i>Theoretical Computer Science</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.tcs.2014.06.031\">https://doi.org/10.1016/j.tcs.2014.06.031</a>"},"intvolume":"       547","external_id":{"arxiv":["1307.4473"]},"status":"public","main_file_link":[{"url":"http://arxiv.org/abs/1307.4473","open_access":"1"}],"date_published":"2014-08-28T00:00:00Z","publication_status":"published","oa":1,"_id":"1375","year":"2014","date_created":"2018-12-11T11:51:40Z","volume":547,"type":"journal_article","oa_version":"Preprint","month":"08","date_updated":"2022-09-09T11:50:58Z","abstract":[{"text":"We consider directed graphs where each edge is labeled with an integer weight and study the fundamental algorithmic question of computing the value of a cycle with minimum mean weight. Our contributions are twofold: (1) First we show that the algorithmic question is reducible to the problem of a logarithmic number of min-plus matrix multiplications of n×n-matrices, where n is the number of vertices of the graph. (2) Second, when the weights are nonnegative, we present the first (1+ε)-approximation algorithm for the problem and the running time of our algorithm is Õ(nωlog3(nW/ε)/ε),1 where O(nω) is the time required for the classic n×n-matrix multiplication and W is the maximum value of the weights. With an additional O(log(nW/ε)) factor in space a cycle with approximately optimal weight can be computed within the same time bound.","lang":"eng"}],"page":"104 - 116","issue":"C","language":[{"iso":"eng"}],"project":[{"grant_number":"P 23499-N23","name":"Modern Graph Algorithmic Techniques in Formal Verification","_id":"2584A770-B435-11E9-9278-68D0E5697425","call_identifier":"FWF"},{"name":"Game Theory","_id":"25863FF4-B435-11E9-9278-68D0E5697425","call_identifier":"FWF","grant_number":"S11407"},{"grant_number":"279307","_id":"2581B60A-B435-11E9-9278-68D0E5697425","call_identifier":"FP7","name":"Quantitative Graph Games: Theory and Applications"},{"_id":"2587B514-B435-11E9-9278-68D0E5697425","name":"Microsoft Research Faculty Fellowship"}],"quality_controlled":"1","doi":"10.1016/j.tcs.2014.06.031","article_type":"original","scopus_import":"1","ec_funded":1,"article_processing_charge":"No","publication":"Theoretical Computer Science","department":[{"_id":"KrCh"}],"publisher":"Elsevier","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publist_id":"5836","arxiv":1,"title":"Approximating the minimum cycle mean","day":"28","author":[{"orcid":"0000-0002-4561-241X","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","full_name":"Chatterjee, Krishnendu","first_name":"Krishnendu","last_name":"Chatterjee"},{"full_name":"Henzinger, Monika H","orcid":"0000-0002-5008-6530","id":"540c9bbd-f2de-11ec-812d-d04a5be85630","first_name":"Monika H","last_name":"Henzinger"},{"first_name":"Sebastian","last_name":"Krinninger","full_name":"Krinninger, Sebastian"},{"first_name":"Veronika","last_name":"Loitzenbauer","full_name":"Loitzenbauer, Veronika"},{"last_name":"Raskin","first_name":"Michael","full_name":"Raskin, Michael"}]},{"has_accepted_license":"1","publication_status":"published","oa":1,"ddc":["000","005"],"date_published":"2014-01-01T00:00:00Z","status":"public","alternative_title":["LNCS"],"citation":{"short":"C. Dragoi, T.A. Henzinger, H. Veith, J. Widder, D. Zufferey, in:, Springer, 2014, pp. 161–181.","chicago":"Dragoi, Cezara, Thomas A Henzinger, Helmut Veith, Josef Widder, and Damien Zufferey. “A Logic-Based Framework for Verifying Consensus Algorithms,” 8318:161–81. Springer, 2014. <a href=\"https://doi.org/10.1007/978-3-642-54013-4_10\">https://doi.org/10.1007/978-3-642-54013-4_10</a>.","ieee":"C. Dragoi, T. A. Henzinger, H. Veith, J. Widder, and D. Zufferey, “A logic-based framework for verifying consensus algorithms,” presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, San Diego, USA, 2014, vol. 8318, pp. 161–181.","apa":"Dragoi, C., Henzinger, T. A., Veith, H., Widder, J., &#38; Zufferey, D. (2014). A logic-based framework for verifying consensus algorithms (Vol. 8318, pp. 161–181). Presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, San Diego, USA: Springer. <a href=\"https://doi.org/10.1007/978-3-642-54013-4_10\">https://doi.org/10.1007/978-3-642-54013-4_10</a>","ista":"Dragoi C, Henzinger TA, Veith H, Widder J, Zufferey D. 2014. A logic-based framework for verifying consensus algorithms. VMCAI: Verification, Model Checking and Abstract Interpretation, LNCS, vol. 8318, 161–181.","mla":"Dragoi, Cezara, et al. <i>A Logic-Based Framework for Verifying Consensus Algorithms</i>. Vol. 8318, Springer, 2014, pp. 161–81, doi:<a href=\"https://doi.org/10.1007/978-3-642-54013-4_10\">10.1007/978-3-642-54013-4_10</a>.","ama":"Dragoi C, Henzinger TA, Veith H, Widder J, Zufferey D. A logic-based framework for verifying consensus algorithms. In: Vol 8318. Springer; 2014:161-181. doi:<a href=\"https://doi.org/10.1007/978-3-642-54013-4_10\">10.1007/978-3-642-54013-4_10</a>"},"intvolume":"      8318","date_updated":"2021-01-12T06:50:22Z","abstract":[{"text":"Fault-tolerant distributed algorithms play an important role in ensuring the reliability of many software applications. In this paper we consider distributed algorithms whose computations are organized in rounds. To verify the correctness of such algorithms, we reason about (i) properties (such as invariants) of the state, (ii) the transitions controlled by the algorithm, and (iii) the communication graph. We introduce a logic that addresses these points, and contains set comprehensions with cardinality constraints, function symbols to describe the local states of each process, and a limited form of quantifier alternation to express the verification conditions. We show its use in automating the verification of consensus algorithms. In particular, we give a semi-decision procedure for the unsatisfiability problem of the logic and identify a decidable fragment. We successfully applied our framework to verify the correctness of a variety of consensus algorithms tolerant to both benign faults (message loss, process crashes) and value faults (message corruption).","lang":"eng"}],"oa_version":"Submitted Version","month":"01","type":"conference","page":"161 - 181","date_created":"2018-12-11T11:51:45Z","file_date_updated":"2020-07-14T12:44:48Z","volume":8318,"year":"2014","acknowledgement":"Supported by the Vienna Science and Technology Fund (WWTF) through grant PROSEED.","_id":"1392","pubrep_id":"179","quality_controlled":"1","doi":"10.1007/978-3-642-54013-4_10","project":[{"grant_number":"S 11407_N23","name":"Rigorous Systems Engineering","_id":"25832EC2-B435-11E9-9278-68D0E5697425","call_identifier":"FWF"},{"grant_number":"267989","call_identifier":"FP7","_id":"25EE3708-B435-11E9-9278-68D0E5697425","name":"Quantitative Reactive Modeling"}],"language":[{"iso":"eng"}],"conference":{"name":"VMCAI: Verification, Model Checking and Abstract Interpretation","location":"San Diego, USA","start_date":"2014-01-19","end_date":"2014-01-21"},"file":[{"file_name":"IST-2014-179-v1+1_vmcai14.pdf","creator":"system","relation":"main_file","content_type":"application/pdf","file_size":444138,"checksum":"bffa33d39be77df0da39defe97eabf84","date_updated":"2020-07-14T12:44:48Z","file_id":"4859","access_level":"open_access","date_created":"2018-12-12T10:11:06Z"}],"day":"01","author":[{"last_name":"Dragoi","first_name":"Cezara","id":"2B2B5ED0-F248-11E8-B48F-1D18A9856A87","full_name":"Dragoi, Cezara"},{"full_name":"Henzinger, Thomas A","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","orcid":"0000−0002−2985−7724","last_name":"Henzinger","first_name":"Thomas A"},{"last_name":"Veith","first_name":"Helmut","full_name":"Veith, Helmut"},{"first_name":"Josef","last_name":"Widder","full_name":"Widder, Josef"},{"last_name":"Zufferey","first_name":"Damien","full_name":"Zufferey, Damien","id":"4397AC76-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-3197-8736"}],"publist_id":"5817","title":"A logic-based framework for verifying consensus algorithms","department":[{"_id":"ToHe"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publisher":"Springer","scopus_import":1,"ec_funded":1},{"status":"public","citation":{"mla":"Gordon, Andrew, et al. “Probabilistic Programming.” <i>Proceedings of the on Future of Software Engineering</i>, ACM, 2014, pp. 167–81, doi:<a href=\"https://doi.org/10.1145/2593882.2593900\">10.1145/2593882.2593900</a>.","ista":"Gordon A, Henzinger TA, Nori A, Rajamani S. 2014. Probabilistic programming. Proceedings of the on Future of Software Engineering. FOSE: Future of Software Engineering, 167–181.","apa":"Gordon, A., Henzinger, T. A., Nori, A., &#38; Rajamani, S. (2014). Probabilistic programming. In <i>Proceedings of the on Future of Software Engineering</i> (pp. 167–181). Hyderabad, India: ACM. <a href=\"https://doi.org/10.1145/2593882.2593900\">https://doi.org/10.1145/2593882.2593900</a>","ama":"Gordon A, Henzinger TA, Nori A, Rajamani S. Probabilistic programming. In: <i>Proceedings of the on Future of Software Engineering</i>. ACM; 2014:167-181. doi:<a href=\"https://doi.org/10.1145/2593882.2593900\">10.1145/2593882.2593900</a>","short":"A. Gordon, T.A. Henzinger, A. Nori, S. Rajamani, in:, Proceedings of the on Future of Software Engineering, ACM, 2014, pp. 167–181.","ieee":"A. Gordon, T. A. Henzinger, A. Nori, and S. Rajamani, “Probabilistic programming,” in <i>Proceedings of the on Future of Software Engineering</i>, Hyderabad, India, 2014, pp. 167–181.","chicago":"Gordon, Andrew, Thomas A Henzinger, Aditya Nori, and Sriram Rajamani. “Probabilistic Programming.” In <i>Proceedings of the on Future of Software Engineering</i>, 167–81. ACM, 2014. <a href=\"https://doi.org/10.1145/2593882.2593900\">https://doi.org/10.1145/2593882.2593900</a>."},"oa":1,"publication_status":"published","date_published":"2014-05-31T00:00:00Z","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1145/2593882.2593900"}],"year":"2014","_id":"1393","page":"167 - 181","abstract":[{"lang":"eng","text":"Probabilistic programs are usual functional or imperative programs with two added constructs: (1) the ability to draw values at random from distributions, and (2) the ability to condition values of variables in a program via observations. Models from diverse application areas such as computer vision, coding theory, cryptographic protocols, biology and reliability analysis can be written as probabilistic programs. Probabilistic inference is the problem of computing an explicit representation of the probability distribution implicitly specified by a probabilistic program. Depending on the application, the desired output from inference may vary-we may want to estimate the expected value of some function f with respect to the distribution, or the mode of the distribution, or simply a set of samples drawn from the distribution. In this paper, we describe connections this research area called \\Probabilistic Programming&quot; has with programming languages and software engineering, and this includes language design, and the static and dynamic analysis of programs. We survey current state of the art and speculate on promising directions for future research."}],"date_updated":"2021-01-12T06:50:22Z","oa_version":"Published Version","type":"conference","month":"05","date_created":"2018-12-11T11:51:45Z","project":[{"call_identifier":"FP7","_id":"25EE3708-B435-11E9-9278-68D0E5697425","name":"Quantitative Reactive Modeling","grant_number":"267989"},{"name":"Rigorous Systems Engineering","call_identifier":"FWF","_id":"25832EC2-B435-11E9-9278-68D0E5697425","grant_number":"S 11407_N23"}],"conference":{"end_date":"2014-06-07","start_date":"2014-05-31","location":"Hyderabad, India","name":"FOSE: Future of Software Engineering"},"language":[{"iso":"eng"}],"doi":"10.1145/2593882.2593900","quality_controlled":"1","publisher":"ACM","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","department":[{"_id":"ToHe"}],"publication":"Proceedings of the on Future of Software Engineering","ec_funded":1,"scopus_import":1,"article_processing_charge":"No","author":[{"first_name":"Andrew","last_name":"Gordon","full_name":"Gordon, Andrew"},{"id":"40876CD8-F248-11E8-B48F-1D18A9856A87","orcid":"0000−0002−2985−7724","full_name":"Henzinger, Thomas A","last_name":"Henzinger","first_name":"Thomas A"},{"full_name":"Nori, Aditya","first_name":"Aditya","last_name":"Nori"},{"last_name":"Rajamani","first_name":"Sriram","full_name":"Rajamani, Sriram"}],"day":"31","title":"Probabilistic programming","publist_id":"5816"},{"title":"Immune defences in ants: Effects of social immunisation and a fungal ectosymbiont in the ant Lasius neglectus","degree_awarded":"PhD","date_created":"2018-12-11T11:51:46Z","publist_id":"5814","page":"131","author":[{"full_name":"Konrad, Matthias","id":"46528076-F248-11E8-B48F-1D18A9856A87","last_name":"Konrad","first_name":"Matthias"}],"day":"01","date_updated":"2023-09-07T11:38:56Z","abstract":[{"lang":"eng","text":"In this thesis I studied various individual and social immune defences employed by the invasive garden ant Lasius neglectus mostly against entomopathogenic fungi.  The first two chapters of this thesis address the phenomenon of 'social immunisation'. Social immunisation, that is the immunological protection of group members due to social contact to a pathogen-exposed nestmate, has been described in various social insect species against different types of pathogens. However, in the case of entomopathogenic fungi it has, so far, only been demonstrated that social immunisation exists at all. Its underlying mechanisms r any other properties were, however, unknown. In the first chapter of this thesis I identified the mechanistic basis of social immunisation in L. neglectus against the entomopathogenous fungus Metarhizium. I could show that nestmates of a pathogen-exposed individual contract low-level infections due to social interactions. These low-level infections are, however, non-lethal and cause an active stimulation of the immune system, which protects the nestmates upon subsequent pathogen encounters. In the second chapter of this thesis I investigated the specificity and colony level effects of social immunisation. I demonstrated that the protection conferred by social immunisation is highly specific, protecting ants only against the same pathogen strain. In addition, depending on the respective context, social immunisation may even cause fitness costs. I further showed that social immunisation crucially affects sanitary behaviour and disease dynamics within ant groups. In the third chapter of this thesis I studied the effects of the ectosymbiotic fungus Laboulbenia formicarum on its host L. neglectus. Although Laboulbeniales are the largest order of insect-parasitic fungi, research concerning host fitness consequence is sparse. I showed that highly Laboulbenia-infected ants sustain fitness costs under resource limitation, however, gain fitness benefits when exposed to an entomopathogenus fungus. These effects are probably cause by a prophylactic upregulation of behavioural as well as physiological immune defences in highly infected ants."}],"oa_version":"None","month":"02","type":"dissertation","_id":"1395","article_processing_charge":"No","publisher":"Institute of Science and Technology Austria","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","department":[{"_id":"SyCr"}],"year":"2014","supervisor":[{"last_name":"Cremer","first_name":"Sylvia M","full_name":"Cremer, Sylvia M","id":"2F64EC8C-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-2193-3868"}],"date_published":"2014-02-01T00:00:00Z","publication_status":"published","publication_identifier":{"issn":["2663-337X"]},"language":[{"iso":"eng"}],"citation":{"short":"M. Konrad, Immune Defences in Ants: Effects of Social Immunisation and a Fungal Ectosymbiont in the Ant Lasius Neglectus, Institute of Science and Technology Austria, 2014.","ieee":"M. Konrad, “Immune defences in ants: Effects of social immunisation and a fungal ectosymbiont in the ant Lasius neglectus,” Institute of Science and Technology Austria, 2014.","chicago":"Konrad, Matthias. “Immune Defences in Ants: Effects of Social Immunisation and a Fungal Ectosymbiont in the Ant Lasius Neglectus.” Institute of Science and Technology Austria, 2014.","ista":"Konrad M. 2014. Immune defences in ants: Effects of social immunisation and a fungal ectosymbiont in the ant Lasius neglectus. Institute of Science and Technology Austria.","mla":"Konrad, Matthias. <i>Immune Defences in Ants: Effects of Social Immunisation and a Fungal Ectosymbiont in the Ant Lasius Neglectus</i>. Institute of Science and Technology Austria, 2014.","apa":"Konrad, M. (2014). <i>Immune defences in ants: Effects of social immunisation and a fungal ectosymbiont in the ant Lasius neglectus</i>. Institute of Science and Technology Austria.","ama":"Konrad M. Immune defences in ants: Effects of social immunisation and a fungal ectosymbiont in the ant Lasius neglectus. 2014."},"alternative_title":["ISTA Thesis"],"status":"public"},{"_id":"14018","year":"2014","date_created":"2023-08-10T06:38:19Z","volume":171,"date_updated":"2023-08-22T08:58:12Z","abstract":[{"text":"The sensitivities of high-harmonic generation (HHG) and strong-field ionization (SFI) to coupled electronic and nuclear dynamics are studied, using the nitric oxide (NO) molecule as an example. A coherent superposition of electronic and rotational states of NO is prepared by impulsive stimulated Raman scattering and probed by simultaneous detection of HHG and SFI yields. We observe a fourfold higher sensitivity of high-harmonic generation to electronic dynamics and attribute it to the presence of inelastic quantum paths connecting coherently related electronic states [Kraus et al., Phys. Rev. Lett.111, 243005 (2013)]. Whereas different harmonic orders display very different sensitivities to rotational or electronic dynamics, strong-field ionization is found to be most sensitive to electronic motion. We introduce a general theoretical formalism for high-harmonic generation from coupled nuclear-electronic wave packets. We show that the unequal sensitivities of different harmonic orders to electronic or rotational dynamics result from the angle dependence of the photorecombination matrix elements which encode several autoionizing and shape resonances in the photoionization continuum of NO. We further study the dependence of rotational and electronic coherences on the intensity of the excitation pulse and support the observations with calculations.","lang":"eng"}],"type":"journal_article","month":"04","oa_version":"None","page":"113-132","citation":{"ama":"Baykusheva DR, Kraus PM, Zhang SB, Rohringer N, Wörner HJ. The sensitivities of high-harmonic generation and strong-field ionization to coupled electronic and nuclear dynamics. <i>Faraday Discussions</i>. 2014;171:113-132. doi:<a href=\"https://doi.org/10.1039/c4fd00018h\">10.1039/c4fd00018h</a>","mla":"Baykusheva, Denitsa Rangelova, et al. “The Sensitivities of High-Harmonic Generation and Strong-Field Ionization to Coupled Electronic and Nuclear Dynamics.” <i>Faraday Discussions</i>, vol. 171, Royal Society of Chemistry, 2014, pp. 113–32, doi:<a href=\"https://doi.org/10.1039/c4fd00018h\">10.1039/c4fd00018h</a>.","ista":"Baykusheva DR, Kraus PM, Zhang SB, Rohringer N, Wörner HJ. 2014. The sensitivities of high-harmonic generation and strong-field ionization to coupled electronic and nuclear dynamics. Faraday Discussions. 171, 113–132.","apa":"Baykusheva, D. R., Kraus, P. M., Zhang, S. B., Rohringer, N., &#38; Wörner, H. J. (2014). The sensitivities of high-harmonic generation and strong-field ionization to coupled electronic and nuclear dynamics. <i>Faraday Discussions</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/c4fd00018h\">https://doi.org/10.1039/c4fd00018h</a>","ieee":"D. R. Baykusheva, P. M. Kraus, S. B. Zhang, N. Rohringer, and H. J. Wörner, “The sensitivities of high-harmonic generation and strong-field ionization to coupled electronic and nuclear dynamics,” <i>Faraday Discussions</i>, vol. 171. Royal Society of Chemistry, pp. 113–132, 2014.","chicago":"Baykusheva, Denitsa Rangelova, Peter M. Kraus, Song Bin Zhang, Nina Rohringer, and Hans Jakob Wörner. “The Sensitivities of High-Harmonic Generation and Strong-Field Ionization to Coupled Electronic and Nuclear Dynamics.” <i>Faraday Discussions</i>. Royal Society of Chemistry, 2014. <a href=\"https://doi.org/10.1039/c4fd00018h\">https://doi.org/10.1039/c4fd00018h</a>.","short":"D.R. Baykusheva, P.M. Kraus, S.B. Zhang, N. Rohringer, H.J. Wörner, Faraday Discussions 171 (2014) 113–132."},"extern":"1","intvolume":"       171","status":"public","external_id":{"pmid":["25415558"]},"date_published":"2014-04-14T00:00:00Z","publication_status":"published","scopus_import":"1","article_processing_charge":"No","article_type":"original","publication":"Faraday Discussions","pmid":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publisher":"Royal Society of Chemistry","title":"The sensitivities of high-harmonic generation and strong-field ionization to coupled electronic and nuclear dynamics","day":"14","author":[{"id":"71b4d059-2a03-11ee-914d-dfa3beed6530","full_name":"Baykusheva, Denitsa Rangelova","first_name":"Denitsa Rangelova","last_name":"Baykusheva"},{"full_name":"Kraus, Peter M.","first_name":"Peter M.","last_name":"Kraus"},{"first_name":"Song Bin","last_name":"Zhang","full_name":"Zhang, Song Bin"},{"full_name":"Rohringer, Nina","last_name":"Rohringer","first_name":"Nina"},{"first_name":"Hans Jakob","last_name":"Wörner","full_name":"Wörner, Hans Jakob"}],"language":[{"iso":"eng"}],"keyword":["Physical and Theoretical Chemistry"],"quality_controlled":"1","doi":"10.1039/c4fd00018h","publication_identifier":{"eissn":["1364-5498"],"issn":["1359-6640"]}},{"_id":"14019","year":"2014","date_created":"2023-08-10T06:38:30Z","volume":141,"date_updated":"2023-08-22T09:01:31Z","abstract":[{"text":"The cyclopropene radical cation (c-C3H₄⁺) is an important but poorly characterized three-membered-ring hydrocarbon. We report on a measurement of the high-resolution photoelectron and photoionization spectra of cyclopropene and several deuterated isotopomers, from which we have determined the rovibrational energy level structure of the X⁺ (2)B2 ground electronic state of c-C3H₄⁺ at low energies for the first time. The synthesis of the partially deuterated isotopomers always resulted in mixtures of several isotopomers, differing in their number of D atoms and in the location of these atoms, so that the photoelectron spectra of deuterated samples are superpositions of the spectra of several isotopomers. The rotationally resolved spectra indicate a C(2v)-symmetric R0 structure for the ground electronic state of c-C3H₄⁺. Two vibrational modes of c-C3H₄⁺ are found to have vibrational wave numbers below 300 cm(-1), which is surprising for such a small cyclic hydrocarbon. The analysis of the isotopic shifts of the vibrational levels enabled the assignment of the lowest-frequency mode (fundamental wave number of ≈110 cm(-1) in c-C3H₄⁺) to the CH2 torsional mode (ν₈⁺, A2 symmetry) and of the second-lowest-frequency mode (≈210 cm(-1) in c-C3H₄⁺) to a mode combining a CH out-of-plane with a CH2 rocking motion (ν₁₅⁺, B2 symmetry). The potential energy along the CH2 torsional coordinate is flat near the equilibrium structure and leads to a pronounced anharmonicity.","lang":"eng"}],"type":"journal_article","month":"08","oa_version":"None","citation":{"short":"K. Vasilatou, J.M. Michaud, D.R. Baykusheva, G. Grassi, F. Merkt, The Journal of Chemical Physics 141 (2014).","chicago":"Vasilatou, K., J. M. Michaud, Denitsa Rangelova Baykusheva, G. Grassi, and F. Merkt. “The Cyclopropene Radical Cation: Rovibrational Level Structure at Low Energies from High-Resolution Photoelectron Spectra.” <i>The Journal of Chemical Physics</i>. AIP Publishing, 2014. <a href=\"https://doi.org/10.1063/1.4890744\">https://doi.org/10.1063/1.4890744</a>.","ieee":"K. Vasilatou, J. M. Michaud, D. R. Baykusheva, G. Grassi, and F. Merkt, “The cyclopropene radical cation: Rovibrational level structure at low energies from high-resolution photoelectron spectra,” <i>The Journal of Chemical Physics</i>, vol. 141, no. 6. AIP Publishing, 2014.","apa":"Vasilatou, K., Michaud, J. M., Baykusheva, D. R., Grassi, G., &#38; Merkt, F. (2014). The cyclopropene radical cation: Rovibrational level structure at low energies from high-resolution photoelectron spectra. <i>The Journal of Chemical Physics</i>. AIP Publishing. <a href=\"https://doi.org/10.1063/1.4890744\">https://doi.org/10.1063/1.4890744</a>","ista":"Vasilatou K, Michaud JM, Baykusheva DR, Grassi G, Merkt F. 2014. The cyclopropene radical cation: Rovibrational level structure at low energies from high-resolution photoelectron spectra. The Journal of Chemical Physics. 141(6), 064317.","mla":"Vasilatou, K., et al. “The Cyclopropene Radical Cation: Rovibrational Level Structure at Low Energies from High-Resolution Photoelectron Spectra.” <i>The Journal of Chemical Physics</i>, vol. 141, no. 6, 064317, AIP Publishing, 2014, doi:<a href=\"https://doi.org/10.1063/1.4890744\">10.1063/1.4890744</a>.","ama":"Vasilatou K, Michaud JM, Baykusheva DR, Grassi G, Merkt F. The cyclopropene radical cation: Rovibrational level structure at low energies from high-resolution photoelectron spectra. <i>The Journal of Chemical Physics</i>. 2014;141(6). doi:<a href=\"https://doi.org/10.1063/1.4890744\">10.1063/1.4890744</a>"},"extern":"1","intvolume":"       141","status":"public","external_id":{"pmid":["25134581"]},"date_published":"2014-08-14T00:00:00Z","publication_status":"published","scopus_import":"1","article_processing_charge":"No","article_type":"original","publication":"The Journal of Chemical Physics","pmid":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publisher":"AIP Publishing","title":"The cyclopropene radical cation: Rovibrational level structure at low energies from high-resolution photoelectron spectra","article_number":"064317","day":"14","author":[{"full_name":"Vasilatou, K.","first_name":"K.","last_name":"Vasilatou"},{"full_name":"Michaud, J. M.","last_name":"Michaud","first_name":"J. M."},{"full_name":"Baykusheva, Denitsa Rangelova","id":"71b4d059-2a03-11ee-914d-dfa3beed6530","first_name":"Denitsa Rangelova","last_name":"Baykusheva"},{"last_name":"Grassi","first_name":"G.","full_name":"Grassi, G."},{"first_name":"F.","last_name":"Merkt","full_name":"Merkt, F."}],"language":[{"iso":"eng"}],"issue":"6","keyword":["Physical and Theoretical Chemistry","General Physics and Astronomy"],"quality_controlled":"1","doi":"10.1063/1.4890744","publication_identifier":{"eissn":["1089-7690"],"issn":["0021-9606"]}},{"alternative_title":["ISTA Thesis"],"status":"public","citation":{"ista":"Marhavá P. 2014. Molecular mechanisms of patterning and subcellular trafficking in Arabidopsis thaliana. Institute of Science and Technology Austria.","mla":"Marhavá, Petra. <i>Molecular Mechanisms of Patterning and Subcellular Trafficking in Arabidopsis Thaliana</i>. Institute of Science and Technology Austria, 2014.","apa":"Marhavá, P. (2014). <i>Molecular mechanisms of patterning and subcellular trafficking in Arabidopsis thaliana</i>. Institute of Science and Technology Austria.","ama":"Marhavá P. Molecular mechanisms of patterning and subcellular trafficking in Arabidopsis thaliana. 2014.","short":"P. Marhavá, Molecular Mechanisms of Patterning and Subcellular Trafficking in Arabidopsis Thaliana, Institute of Science and Technology Austria, 2014.","ieee":"P. Marhavá, “Molecular mechanisms of patterning and subcellular trafficking in Arabidopsis thaliana,” Institute of Science and Technology Austria, 2014.","chicago":"Marhavá, Petra. “Molecular Mechanisms of Patterning and Subcellular Trafficking in Arabidopsis Thaliana.” Institute of Science and Technology Austria, 2014."},"language":[{"iso":"eng"}],"publication_status":"published","publication_identifier":{"issn":["2663-337X"]},"supervisor":[{"first_name":"Jiří","last_name":"Friml","id":"4159519E-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-8302-7596","full_name":"Friml, Jiří"}],"date_published":"2014-12-01T00:00:00Z","publisher":"Institute of Science and Technology Austria","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","department":[{"_id":"JiFr"}],"year":"2014","_id":"1402","article_processing_charge":"No","page":"90","author":[{"last_name":"Marhavá","first_name":"Petra","full_name":"Marhavá, Petra","id":"44E59624-F248-11E8-B48F-1D18A9856A87"}],"day":"01","date_updated":"2023-09-07T11:39:38Z","abstract":[{"text":"Phosphatidylinositol (Ptdlns) is a structural phospholipid that can be phosphorylated into various lipid signaling molecules, designated polyphosphoinositides (PPIs). The reversible phosphorylation of PPIs on the 3, 4, or 5 position of inositol is performed by a set of organelle-specific kinases and phosphatases, and the characteristic head groups make these molecules ideal for regulating biological processes in time and space. In yeast and mammals, Ptdlns3P and Ptdlns(3,5)P2 play crucial roles in trafficking toward the lytic compartments, whereas the role in plants is not yet fully understood. Here we identified the role of a land plant-specific subgroup of PPI phosphatases, the suppressor of actin 2 (SAC2) to SAC5, during vauolar trafficking and morphogenesis in Arabidopsis thaliana. SAC2-SAC5 localize to the tonoplast along with Ptdlns3P, the presumable product of their activity. in SAC gain- and loss-of-function mutants, the levels of Ptdlns monophosphates and bisphosphates were changed, with opposite effects on the morphology of storage and lytic vacuoles, and the trafficking toward the vacuoles was defective. Moreover, multiple sac knockout mutants had an increased number of smaller storage and lytic vacuoles, whereas extralarge vacuoles were observed in the overexpression lines, correlating with various growth and developmental defects. The fragmented vacuolar phenotype of sac mutants could be mimicked by treating wild-type seedlings with Ptdlns(3,5)P2, corroborating that this PPI is important for vacuole morphology. Taken together, these results provide evidence that PPIs, together with their metabolic enzymes SAC2-SAC5, are crucial for vacuolar trafficking and for vacuolar morphology and function in plants.","lang":"eng"}],"type":"dissertation","month":"12","oa_version":"None","title":"Molecular mechanisms of patterning and subcellular trafficking in Arabidopsis thaliana","publist_id":"5805","degree_awarded":"PhD","date_created":"2018-12-11T11:51:49Z"},{"volume":113,"date_created":"2023-08-10T06:38:38Z","type":"journal_article","month":"07","oa_version":"Preprint","abstract":[{"lang":"eng","text":"We report the observation of macroscopic field-free orientation, i.e., more than 73% of CO molecules pointing in the same direction. This is achieved through an all-optical scheme operating at high particle densities (>10(17)  cm(-3)) that combines one-color (ω) and two-color (ω+2ω) nonresonant femtosecond laser pulses. We show that the achieved orientation solely relies on the hyperpolarizability interaction as opposed to an ionization-depletion mechanism, thus, opening a wide range of applications. The achieved strong orientation enables us to reveal the molecular-frame anisotropies of the photorecombination amplitudes and phases caused by a shape resonance. The resonance appears as a local maximum in the even-harmonic emission around 28 eV. In contrast, the odd-harmonic emission is suppressed in this spectral region through the combined effects of an asymmetric photorecombination phase and a subcycle Stark effect, generic for polar molecules, that we experimentally identify."}],"date_updated":"2023-08-22T09:02:56Z","_id":"14020","year":"2014","date_published":"2014-07-11T00:00:00Z","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1311.3923"}],"publication_status":"published","oa":1,"intvolume":"       113","extern":"1","citation":{"ama":"Kraus PM, Baykusheva DR, Wörner HJ. Two-pulse field-free orientation reveals anisotropy of molecular shape resonance. <i>Physical Review Letters</i>. 2014;113(2). doi:<a href=\"https://doi.org/10.1103/physrevlett.113.023001\">10.1103/physrevlett.113.023001</a>","apa":"Kraus, P. M., Baykusheva, D. R., &#38; Wörner, H. J. (2014). Two-pulse field-free orientation reveals anisotropy of molecular shape resonance. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physrevlett.113.023001\">https://doi.org/10.1103/physrevlett.113.023001</a>","ista":"Kraus PM, Baykusheva DR, Wörner HJ. 2014. Two-pulse field-free orientation reveals anisotropy of molecular shape resonance. Physical Review Letters. 113(2), 023001.","mla":"Kraus, P. M., et al. “Two-Pulse Field-Free Orientation Reveals Anisotropy of Molecular Shape Resonance.” <i>Physical Review Letters</i>, vol. 113, no. 2, 023001, American Physical Society, 2014, doi:<a href=\"https://doi.org/10.1103/physrevlett.113.023001\">10.1103/physrevlett.113.023001</a>.","chicago":"Kraus, P. M., Denitsa Rangelova Baykusheva, and H. J. Wörner. “Two-Pulse Field-Free Orientation Reveals Anisotropy of Molecular Shape Resonance.” <i>Physical Review Letters</i>. American Physical Society, 2014. <a href=\"https://doi.org/10.1103/physrevlett.113.023001\">https://doi.org/10.1103/physrevlett.113.023001</a>.","ieee":"P. M. Kraus, D. R. Baykusheva, and H. J. Wörner, “Two-pulse field-free orientation reveals anisotropy of molecular shape resonance,” <i>Physical Review Letters</i>, vol. 113, no. 2. American Physical Society, 2014.","short":"P.M. Kraus, D.R. Baykusheva, H.J. Wörner, Physical Review Letters 113 (2014)."},"external_id":{"pmid":["25062172"],"arxiv":["1311.3923"]},"status":"public","article_number":"023001","title":"Two-pulse field-free orientation reveals anisotropy of molecular shape resonance","arxiv":1,"author":[{"full_name":"Kraus, P. M.","first_name":"P. M.","last_name":"Kraus"},{"id":"71b4d059-2a03-11ee-914d-dfa3beed6530","full_name":"Baykusheva, Denitsa Rangelova","first_name":"Denitsa Rangelova","last_name":"Baykusheva"},{"full_name":"Wörner, H. J.","first_name":"H. J.","last_name":"Wörner"}],"day":"11","publication":"Physical Review Letters","article_type":"original","scopus_import":"1","article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publisher":"American Physical Society","pmid":1,"doi":"10.1103/physrevlett.113.023001","quality_controlled":"1","publication_identifier":{"issn":["0031-9007"],"eissn":["1079-7114"]},"keyword":["General Physics and Astronomy"],"issue":"2","language":[{"iso":"eng"}]},{"day":"10","author":[{"full_name":"Kraus, P M","first_name":"P M","last_name":"Kraus"},{"id":"71b4d059-2a03-11ee-914d-dfa3beed6530","full_name":"Baykusheva, Denitsa Rangelova","last_name":"Baykusheva","first_name":"Denitsa Rangelova"},{"last_name":"Wörner","first_name":"H J","full_name":"Wörner, H J"}],"article_number":"124030","title":"Two-pulse orientation dynamics and high-harmonic spectroscopy of strongly-oriented molecules","arxiv":1,"publisher":"IOP Publishing","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_type":"original","scopus_import":"1","article_processing_charge":"No","publication":"Journal of Physics B: Atomic, Molecular and Optical Physics","publication_identifier":{"issn":["0953-4075"],"eissn":["1361-6455"]},"quality_controlled":"1","doi":"10.1088/0953-4075/47/12/124030","issue":"12","language":[{"iso":"eng"}],"keyword":["Condensed Matter Physics","Atomic and Molecular Physics","and Optics"],"type":"journal_article","month":"06","oa_version":"Preprint","date_updated":"2023-08-22T09:04:30Z","abstract":[{"text":"We present the detailed analysis of a new two-pulse orientation scheme that achieves macroscopic field-free orientation at the high particle densities required for attosecond and high-harmonic spectroscopies (Kraus et al 2013 arXiv:1311.3923). Carbon monoxide molecules are oriented by combining one-colour and delayed two-colour non-resonant femtosecond laser pulses. High-harmonic generation is used to probe the oriented wave-packet dynamics and reveals that a very high degree of orientation (Nup/Ntotal = 0.73–0.82) is achieved. We further extend this approach to orienting carbonyl sulphide molecules. We show that the present two-pulse scheme selectively enhances orientation created by the hyperpolarizability interaction whereas the ionization-depletion mechanism plays no role. We further control and optimize orientation through the delay between the one- and two-colour pump pulses. Finally, we demonstrate a complementary encoding of electronic-structure features, such as shape resonances, in the even- and odd-harmonic spectrum. The achieved progress makes two-pulse field-free orientation an attractive tool for a broad class of time-resolved measurements.","lang":"eng"}],"date_created":"2023-08-10T06:38:48Z","volume":47,"year":"2014","_id":"14021","publication_status":"published","oa":1,"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1311.3923"}],"date_published":"2014-06-10T00:00:00Z","external_id":{"arxiv":["1311.3923"]},"status":"public","citation":{"ieee":"P. M. Kraus, D. R. Baykusheva, and H. J. Wörner, “Two-pulse orientation dynamics and high-harmonic spectroscopy of strongly-oriented molecules,” <i>Journal of Physics B: Atomic, Molecular and Optical Physics</i>, vol. 47, no. 12. IOP Publishing, 2014.","chicago":"Kraus, P M, Denitsa Rangelova Baykusheva, and H J Wörner. “Two-Pulse Orientation Dynamics and High-Harmonic Spectroscopy of Strongly-Oriented Molecules.” <i>Journal of Physics B: Atomic, Molecular and Optical Physics</i>. IOP Publishing, 2014. <a href=\"https://doi.org/10.1088/0953-4075/47/12/124030\">https://doi.org/10.1088/0953-4075/47/12/124030</a>.","short":"P.M. Kraus, D.R. Baykusheva, H.J. Wörner, Journal of Physics B: Atomic, Molecular and Optical Physics 47 (2014).","ama":"Kraus PM, Baykusheva DR, Wörner HJ. Two-pulse orientation dynamics and high-harmonic spectroscopy of strongly-oriented molecules. <i>Journal of Physics B: Atomic, Molecular and Optical Physics</i>. 2014;47(12). doi:<a href=\"https://doi.org/10.1088/0953-4075/47/12/124030\">10.1088/0953-4075/47/12/124030</a>","ista":"Kraus PM, Baykusheva DR, Wörner HJ. 2014. Two-pulse orientation dynamics and high-harmonic spectroscopy of strongly-oriented molecules. Journal of Physics B: Atomic, Molecular and Optical Physics. 47(12), 124030.","mla":"Kraus, P. M., et al. “Two-Pulse Orientation Dynamics and High-Harmonic Spectroscopy of Strongly-Oriented Molecules.” <i>Journal of Physics B: Atomic, Molecular and Optical Physics</i>, vol. 47, no. 12, 124030, IOP Publishing, 2014, doi:<a href=\"https://doi.org/10.1088/0953-4075/47/12/124030\">10.1088/0953-4075/47/12/124030</a>.","apa":"Kraus, P. M., Baykusheva, D. R., &#38; Wörner, H. J. (2014). Two-pulse orientation dynamics and high-harmonic spectroscopy of strongly-oriented molecules. <i>Journal of Physics B: Atomic, Molecular and Optical Physics</i>. IOP Publishing. <a href=\"https://doi.org/10.1088/0953-4075/47/12/124030\">https://doi.org/10.1088/0953-4075/47/12/124030</a>"},"intvolume":"        47","extern":"1"},{"language":[{"iso":"eng"}],"citation":{"apa":"Behrndt, M. (2014). <i>Forces driving epithelial spreading in zebrafish epiboly</i>. IST Austria.","mla":"Behrndt, Martin. <i>Forces Driving Epithelial Spreading in Zebrafish Epiboly</i>. IST Austria, 2014.","ista":"Behrndt M. 2014. Forces driving epithelial spreading in zebrafish epiboly. IST Austria.","ama":"Behrndt M. Forces driving epithelial spreading in zebrafish epiboly. 2014.","short":"M. Behrndt, Forces Driving Epithelial Spreading in Zebrafish Epiboly, IST Austria, 2014.","chicago":"Behrndt, Martin. “Forces Driving Epithelial Spreading in Zebrafish Epiboly.” IST Austria, 2014.","ieee":"M. Behrndt, “Forces driving epithelial spreading in zebrafish epiboly,” IST Austria, 2014."},"related_material":{"record":[{"relation":"part_of_dissertation","id":"2282","status":"public"},{"relation":"part_of_dissertation","status":"public","id":"2950"},{"status":"public","id":"3373","relation":"part_of_dissertation"}]},"status":"public","alternative_title":["IST Austria Thesis"],"acknowledged_ssus":[{"_id":"SSU"}],"date_published":"2014-08-01T00:00:00Z","supervisor":[{"last_name":"Heisenberg","first_name":"Carl-Philipp J","full_name":"Heisenberg, Carl-Philipp J","id":"39427864-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-0912-4566"}],"publication_status":"published","_id":"1403","year":"2014","department":[{"_id":"CaHe"}],"publisher":"IST Austria","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publist_id":"5804","date_created":"2018-12-11T11:51:49Z","title":"Forces driving epithelial spreading in zebrafish epiboly","oa_version":"None","month":"08","type":"dissertation","abstract":[{"text":"A variety of developmental and disease related processes depend on epithelial cell sheet spreading. In order to gain insight into the biophysical mechanism(s) underlying the tissue morphogenesis we studied the spreading of an epithelium during the early development of the zebrafish embryo. In zebrafish epiboly the enveloping cell layer (EVL), a simple squamous epithelium, spreads over the yolk cell to completely engulf it at the end of gastrulation. Previous studies have proposed that an actomyosin ring forming within the yolk syncytial layer (YSL) acts as purse string that through constriction along its circumference pulls on the margin of the EVL. Direct biophysical evidence for this hypothesis has however been missing. The aim of the thesis was to understand how the actomyosin ring may generate pulling forces onto the EVL and what cellular mechanism(s) may facilitate the spreading of the epithelium. Using laser ablation to measure cortical tension within the actomyosin ring we found an anisotropic tension distribution, which was highest along the circumference of the ring. However the low degree of anisotropy was incompatible with the actomyosin ring functioning as a purse string only. Additionally, we observed retrograde cortical flow from vegetal parts of the ring into the EVL margin. Interpreting the experimental data using a theoretical distribution that models  the tissues as active viscous gels led us to proposen that the actomyosin ring has a twofold contribution to EVL epiboly. It not only acts as a purse string through constriction along its circumference, but in addition constriction along the width of the ring generates pulling forces through friction-resisted cortical flow. Moreover, when rendering the purse string mechanism unproductive EVL epiboly proceeded normally indicating that the flow-friction mechanism is sufficient to drive the process. Aiming to understand what cellular mechanism(s) may facilitate the spreading of the epithelium we found that tension-oriented EVL cell divisions limit tissue anisotropy by releasing tension along the division axis and promote epithelial spreading. Notably, EVL cells undergo ectopic cell fusion in conditions in which oriented-cell division is impaired or the epithelium is mechanically challenged. Taken together our study of EVL epiboly suggests a novel mechanism of force generation for actomyosin rings through friction-resisted cortical flow and highlights the importance of tension-oriented cell divisions in epithelial morphogenesis.","lang":"eng"}],"day":"01","date_updated":"2023-10-17T12:16:58Z","page":"91","author":[{"first_name":"Martin","last_name":"Behrndt","full_name":"Behrndt, Martin","id":"3ECECA3A-F248-11E8-B48F-1D18A9856A87"}]},{"alternative_title":["IST Austria Thesis"],"status":"public","language":[{"iso":"eng"}],"citation":{"chicago":"Stock, Miriam. “Evolution of a Fungal Pathogen towards Individual versus Social Immunity in Ants.” IST Austria, 2014.","ieee":"M. Stock, “Evolution of a fungal pathogen towards individual versus social immunity in ants,” IST Austria, 2014.","short":"M. Stock, Evolution of a Fungal Pathogen towards Individual versus Social Immunity in Ants, IST Austria, 2014.","ama":"Stock M. Evolution of a fungal pathogen towards individual versus social immunity in ants. 2014.","apa":"Stock, M. (2014). <i>Evolution of a fungal pathogen towards individual versus social immunity in ants</i>. IST Austria.","ista":"Stock M. 2014. Evolution of a fungal pathogen towards individual versus social immunity in ants. IST Austria.","mla":"Stock, Miriam. <i>Evolution of a Fungal Pathogen towards Individual versus Social Immunity in Ants</i>. IST Austria, 2014."},"publication_status":"published","date_published":"2014-04-01T00:00:00Z","supervisor":[{"orcid":"0000-0002-2193-3868","id":"2F64EC8C-F248-11E8-B48F-1D18A9856A87","full_name":"Cremer, Sylvia M","first_name":"Sylvia M","last_name":"Cremer"}],"acknowledgement":"This work was funded by the DFG and the ERC.","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publisher":"IST Austria","department":[{"_id":"SyCr"}],"year":"2014","_id":"1404","author":[{"id":"42462816-F248-11E8-B48F-1D18A9856A87","full_name":"Stock, Miriam","last_name":"Stock","first_name":"Miriam"}],"page":"101","month":"04","oa_version":"None","type":"dissertation","abstract":[{"text":"The co-evolution of hosts and pathogens is characterized by continuous adaptations of both parties. Pathogens of social insects need to adapt towards disease defences at two levels: 1) individual immunity of each colony member consisting of behavioural defence strategies as well as humoral and cellular immune responses and 2) social immunity that is collectively performed by all group members comprising behavioural, physiological and organisational defence strategies.\r\n\r\nTo disentangle the selection pressure on pathogens by the collective versus individual level of disease defence in social insects, we performed an evolution experiment using the Argentine Ant, Linepithema humile, as a host and a mixture of the general insect pathogenic fungus Metarhizium spp. (6 strains) as a pathogen. We allowed pathogen evolution over 10 serial host passages to two different evolution host treatments: (1) only individual host immunity in a single host treatment, and (2) simultaneously acting individual and social immunity in a social host treatment, in which an exposed ant was accompanied by two untreated nestmates.\r\n\r\nBefore starting the pathogen evolution experiment, the 6 Metarhizium spp. strains were characterised concerning conidiospore size killing rates in singly and socially reared ants, their competitiveness under coinfecting conditions and their influence on ant behaviour. We analysed how the ancestral atrain mixture changed in conidiospere size, killing rate and strain composition dependent on host treatment (single or social hosts) during 10 passages and found that killing rate and conidiospere size of the pathogen increased under both evolution regimes, but different depending on host treatment.\r\n\r\nTesting the evolved strain mixtures that evolved under either the single or social host treatment under both single and social current rearing conditions in a full factorial design experiment revealed that the additional collective defences in insect societies add new selection pressure for their coevolving pathogens that compromise their ability to adapt to its host at the group level. To our knowledge, this is the first study directly measuring the influence of social immunity on pathogen evolution.","lang":"eng"}],"date_updated":"2021-01-12T06:50:30Z","day":"01","title":"Evolution of a fungal pathogen towards individual versus social immunity in ants","date_created":"2018-12-11T11:51:49Z","publist_id":"5803"}]