[{"intvolume":"        46","abstract":[{"text":"Neural responses are highly structured, with population activity restricted to a small subset of the astronomical range of possible activity patterns. Characterizing these statistical regularities is important for understanding circuit computation, but challenging in practice. Here we review recent approaches based on the maximum entropy principle used for quantifying collective behavior in neural activity. We highlight recent models that capture population-level statistics of neural data, yielding insights into the organization of the neural code and its biological substrate. Furthermore, the MaxEnt framework provides a general recipe for constructing surrogate ensembles that preserve aspects of the data, but are otherwise maximally unstructured. This idea can be used to generate a hierarchy of controls against which rigorous statistical tests are possible.","lang":"eng"}],"publisher":"Elsevier","project":[{"call_identifier":"FP7","name":"International IST Postdoc Fellowship Programme","_id":"25681D80-B435-11E9-9278-68D0E5697425","grant_number":"291734"}],"date_created":"2018-12-11T11:48:11Z","day":"01","year":"2017","citation":{"ama":"Savin C, Tkačik G. Maximum entropy models as a tool for building precise neural controls. <i>Current Opinion in Neurobiology</i>. 2017;46:120-126. doi:<a href=\"https://doi.org/10.1016/j.conb.2017.08.001\">10.1016/j.conb.2017.08.001</a>","mla":"Savin, Cristina, and Gašper Tkačik. “Maximum Entropy Models as a Tool for Building Precise Neural Controls.” <i>Current Opinion in Neurobiology</i>, vol. 46, Elsevier, 2017, pp. 120–26, doi:<a href=\"https://doi.org/10.1016/j.conb.2017.08.001\">10.1016/j.conb.2017.08.001</a>.","apa":"Savin, C., &#38; Tkačik, G. (2017). Maximum entropy models as a tool for building precise neural controls. <i>Current Opinion in Neurobiology</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.conb.2017.08.001\">https://doi.org/10.1016/j.conb.2017.08.001</a>","ieee":"C. Savin and G. Tkačik, “Maximum entropy models as a tool for building precise neural controls,” <i>Current Opinion in Neurobiology</i>, vol. 46. Elsevier, pp. 120–126, 2017.","chicago":"Savin, Cristina, and Gašper Tkačik. “Maximum Entropy Models as a Tool for Building Precise Neural Controls.” <i>Current Opinion in Neurobiology</i>. Elsevier, 2017. <a href=\"https://doi.org/10.1016/j.conb.2017.08.001\">https://doi.org/10.1016/j.conb.2017.08.001</a>.","ista":"Savin C, Tkačik G. 2017. Maximum entropy models as a tool for building precise neural controls. Current Opinion in Neurobiology. 46, 120–126.","short":"C. Savin, G. Tkačik, Current Opinion in Neurobiology 46 (2017) 120–126."},"volume":46,"doi":"10.1016/j.conb.2017.08.001","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","status":"public","title":"Maximum entropy models as a tool for building precise neural controls","isi":1,"publication_identifier":{"issn":["09594388"]},"ec_funded":1,"department":[{"_id":"GaTk"}],"publist_id":"6943","oa_version":"None","quality_controlled":"1","month":"10","external_id":{"isi":["000416196400016"]},"page":"120 - 126","date_updated":"2023-09-28T11:32:22Z","article_processing_charge":"No","publication":"Current Opinion in Neurobiology","scopus_import":"1","publication_status":"published","date_published":"2017-10-01T00:00:00Z","author":[{"full_name":"Savin, Cristina","last_name":"Savin","first_name":"Cristina","id":"3933349E-F248-11E8-B48F-1D18A9856A87"},{"orcid":"0000-0002-6699-1455","full_name":"Tkacik, Gasper","id":"3D494DCA-F248-11E8-B48F-1D18A9856A87","last_name":"Tkacik","first_name":"Gasper"}],"language":[{"iso":"eng"}],"type":"journal_article","_id":"730"},{"abstract":[{"lang":"eng","text":"Genetic variations in the oxytocin receptor gene affect patients with ASD and ADHD differently."}],"intvolume":"         9","publication_identifier":{"issn":["19466234"]},"publisher":"American Association for the Advancement of Science","department":[{"_id":"GaNo"}],"publist_id":"6938","issue":"411","date_created":"2018-12-11T11:48:12Z","article_number":"eaap8168","quality_controlled":"1","oa_version":"None","year":"2017","day":"11","month":"10","citation":{"mla":"Novarino, Gaia. “The Science of Love in ASD and ADHD.” <i>Science Translational Medicine</i>, vol. 9, no. 411, eaap8168, American Association for the Advancement of Science, 2017, doi:<a href=\"https://doi.org/10.1126/scitranslmed.aap8168\">10.1126/scitranslmed.aap8168</a>.","ama":"Novarino G. The science of love in ASD and ADHD. <i>Science Translational Medicine</i>. 2017;9(411). doi:<a href=\"https://doi.org/10.1126/scitranslmed.aap8168\">10.1126/scitranslmed.aap8168</a>","ista":"Novarino G. 2017. The science of love in ASD and ADHD. Science Translational Medicine. 9(411), eaap8168.","short":"G. Novarino, Science Translational Medicine 9 (2017).","apa":"Novarino, G. (2017). The science of love in ASD and ADHD. <i>Science Translational Medicine</i>. American Association for the Advancement of Science. <a href=\"https://doi.org/10.1126/scitranslmed.aap8168\">https://doi.org/10.1126/scitranslmed.aap8168</a>","chicago":"Novarino, Gaia. “The Science of Love in ASD and ADHD.” <i>Science Translational Medicine</i>. American Association for the Advancement of Science, 2017. <a href=\"https://doi.org/10.1126/scitranslmed.aap8168\">https://doi.org/10.1126/scitranslmed.aap8168</a>.","ieee":"G. Novarino, “The science of love in ASD and ADHD,” <i>Science Translational Medicine</i>, vol. 9, no. 411. American Association for the Advancement of Science, 2017."},"volume":9,"doi":"10.1126/scitranslmed.aap8168","date_updated":"2021-01-12T08:12:57Z","publication_status":"published","date_published":"2017-10-11T00:00:00Z","scopus_import":1,"publication":"Science Translational Medicine","title":"The science of love in ASD and ADHD","author":[{"id":"3E57A680-F248-11E8-B48F-1D18A9856A87","first_name":"Gaia","last_name":"Novarino","full_name":"Novarino, Gaia","orcid":"0000-0002-7673-7178"}],"status":"public","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","language":[{"iso":"eng"}],"type":"journal_article","_id":"731"},{"year":"2017","day":"13","article_type":"original","project":[{"grant_number":"243071","_id":"25DC711C-B435-11E9-9278-68D0E5697425","name":"Social Vaccination in Ant Colonies: from Individual Mechanisms to Society Effects","call_identifier":"FP7"}],"date_created":"2018-12-11T11:48:12Z","file_date_updated":"2020-07-14T12:47:55Z","publisher":"BioMed Central","abstract":[{"text":"Background: Social insects form densely crowded societies in environments with high pathogen loads, but have evolved collective defences that mitigate the impact of disease. However, colony-founding queens lack this protection and suffer high rates of mortality. The impact of pathogens may be exacerbated in species where queens found colonies together, as healthy individuals may contract pathogens from infectious co-founders. Therefore, we tested whether ant queens avoid founding colonies with pathogen-exposed conspecifics and how they might limit disease transmission from infectious individuals. Results: Using Lasius Niger queens and a naturally infecting fungal pathogen Metarhizium brunneum, we observed that queens were equally likely to found colonies with another pathogen-exposed or sham-treated queen. However, when one queen died, the surviving individual performed biting, burial and removal of the corpse. These undertaking behaviours were performed prophylactically, i.e. targeted equally towards non-infected and infected corpses, as well as carried out before infected corpses became infectious. Biting and burial reduced the risk of the queens contracting and dying from disease from an infectious corpse of a dead co-foundress. Conclusions: We show that co-founding ant queens express undertaking behaviours that, in mature colonies, are performed exclusively by workers. Such infection avoidance behaviours act before the queens can contract the disease and will therefore improve the overall chance of colony founding success in ant queens.","lang":"eng"}],"intvolume":"        17","ddc":["576","592"],"has_accepted_license":"1","isi":1,"license":"https://creativecommons.org/licenses/by/4.0/","title":"Co-founding ant queens prevent disease by performing prophylactic undertaking behaviour","status":"public","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","doi":"10.1186/s12862-017-1062-4","citation":{"mla":"Pull, Christopher, and Sylvia Cremer. “Co-Founding Ant Queens Prevent Disease by Performing Prophylactic Undertaking Behaviour.” <i>BMC Evolutionary Biology</i>, vol. 17, no. 1, 219, BioMed Central, 2017, doi:<a href=\"https://doi.org/10.1186/s12862-017-1062-4\">10.1186/s12862-017-1062-4</a>.","ama":"Pull C, Cremer S. Co-founding ant queens prevent disease by performing prophylactic undertaking behaviour. <i>BMC Evolutionary Biology</i>. 2017;17(1). doi:<a href=\"https://doi.org/10.1186/s12862-017-1062-4\">10.1186/s12862-017-1062-4</a>","short":"C. Pull, S. Cremer, BMC Evolutionary Biology 17 (2017).","ista":"Pull C, Cremer S. 2017. Co-founding ant queens prevent disease by performing prophylactic undertaking behaviour. BMC Evolutionary Biology. 17(1), 219.","apa":"Pull, C., &#38; Cremer, S. (2017). Co-founding ant queens prevent disease by performing prophylactic undertaking behaviour. <i>BMC Evolutionary Biology</i>. BioMed Central. <a href=\"https://doi.org/10.1186/s12862-017-1062-4\">https://doi.org/10.1186/s12862-017-1062-4</a>","chicago":"Pull, Christopher, and Sylvia Cremer. “Co-Founding Ant Queens Prevent Disease by Performing Prophylactic Undertaking Behaviour.” <i>BMC Evolutionary Biology</i>. BioMed Central, 2017. <a href=\"https://doi.org/10.1186/s12862-017-1062-4\">https://doi.org/10.1186/s12862-017-1062-4</a>.","ieee":"C. Pull and S. Cremer, “Co-founding ant queens prevent disease by performing prophylactic undertaking behaviour,” <i>BMC Evolutionary Biology</i>, vol. 17, no. 1. BioMed Central, 2017."},"volume":17,"oa":1,"quality_controlled":"1","oa_version":"Published Version","file":[{"creator":"system","date_updated":"2020-07-14T12:47:55Z","relation":"main_file","date_created":"2018-12-12T10:17:18Z","file_name":"IST-2017-882-v1+1_12862_2017_Article_1062.pdf","content_type":"application/pdf","file_size":949857,"file_id":"5271","checksum":"3e24a2cfd48f49f7b3643d08d30fb480","access_level":"open_access"}],"publist_id":"6937","issue":"1","article_number":"219","related_material":{"record":[{"relation":"dissertation_contains","id":"819","status":"public"}]},"tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"ec_funded":1,"department":[{"_id":"SyCr"}],"publication_identifier":{"issn":["14712148"]},"type":"journal_article","_id":"732","author":[{"first_name":"Christopher","last_name":"Pull","id":"3C7F4840-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-1122-3982","full_name":"Pull, Christopher"},{"orcid":"0000-0002-2193-3868","full_name":"Cremer, Sylvia","id":"2F64EC8C-F248-11E8-B48F-1D18A9856A87","first_name":"Sylvia","last_name":"Cremer"}],"language":[{"iso":"eng"}],"date_updated":"2023-09-28T11:31:32Z","publication_status":"published","scopus_import":"1","date_published":"2017-10-13T00:00:00Z","article_processing_charge":"Yes","publication":"BMC Evolutionary Biology","month":"10","pubrep_id":"882","external_id":{"isi":["000412816800001"]}},{"volume":319,"citation":{"mla":"Bao, Zhigang, et al. “Convergence Rate for Spectral Distribution of Addition of Random Matrices.” <i>Advances in Mathematics</i>, vol. 319, Academic Press, 2017, pp. 251–91, doi:<a href=\"https://doi.org/10.1016/j.aim.2017.08.028\">10.1016/j.aim.2017.08.028</a>.","ama":"Bao Z, Erdös L, Schnelli K. Convergence rate for spectral distribution of addition of random matrices. <i>Advances in Mathematics</i>. 2017;319:251-291. doi:<a href=\"https://doi.org/10.1016/j.aim.2017.08.028\">10.1016/j.aim.2017.08.028</a>","ista":"Bao Z, Erdös L, Schnelli K. 2017. Convergence rate for spectral distribution of addition of random matrices. Advances in Mathematics. 319, 251–291.","short":"Z. Bao, L. Erdös, K. Schnelli, Advances in Mathematics 319 (2017) 251–291.","chicago":"Bao, Zhigang, László Erdös, and Kevin Schnelli. “Convergence Rate for Spectral Distribution of Addition of Random Matrices.” <i>Advances in Mathematics</i>. Academic Press, 2017. <a href=\"https://doi.org/10.1016/j.aim.2017.08.028\">https://doi.org/10.1016/j.aim.2017.08.028</a>.","ieee":"Z. Bao, L. Erdös, and K. Schnelli, “Convergence rate for spectral distribution of addition of random matrices,” <i>Advances in Mathematics</i>, vol. 319. Academic Press, pp. 251–291, 2017.","apa":"Bao, Z., Erdös, L., &#38; Schnelli, K. (2017). Convergence rate for spectral distribution of addition of random matrices. <i>Advances in Mathematics</i>. Academic Press. <a href=\"https://doi.org/10.1016/j.aim.2017.08.028\">https://doi.org/10.1016/j.aim.2017.08.028</a>"},"doi":"10.1016/j.aim.2017.08.028","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","status":"public","title":"Convergence rate for spectral distribution of addition of random matrices","isi":1,"intvolume":"       319","abstract":[{"text":"Let A and B be two N by N deterministic Hermitian matrices and let U be an N by N Haar distributed unitary matrix. It is well known that the spectral distribution of the sum H = A + UBU∗ converges weakly to the free additive convolution of the spectral distributions of A and B, as N tends to infinity. We establish the optimal convergence rate in the bulk of the spectrum.","lang":"eng"}],"publisher":"Academic Press","date_created":"2018-12-11T11:48:13Z","project":[{"grant_number":"338804","call_identifier":"FP7","_id":"258DCDE6-B435-11E9-9278-68D0E5697425","name":"Random matrices, universality and disordered quantum systems"}],"day":"15","year":"2017","external_id":{"isi":["000412150400010"]},"month":"10","article_processing_charge":"No","publication":"Advances in Mathematics","scopus_import":"1","publication_status":"published","date_published":"2017-10-15T00:00:00Z","page":"251 - 291","date_updated":"2023-09-28T11:30:42Z","language":[{"iso":"eng"}],"author":[{"last_name":"Bao","first_name":"Zhigang","id":"442E6A6C-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-3036-1475","full_name":"Bao, Zhigang"},{"full_name":"Erdös, László","orcid":"0000-0001-5366-9603","last_name":"Erdös","first_name":"László","id":"4DBD5372-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Schnelli, Kevin","orcid":"0000-0003-0954-3231","id":"434AD0AE-F248-11E8-B48F-1D18A9856A87","last_name":"Schnelli","first_name":"Kevin"}],"_id":"733","acknowledgement":"Partially supported by ERC Advanced Grant RANMAT No. 338804, Hong Kong RGC grant ECS 26301517, and the Göran Gustafsson Foundation","type":"journal_article","department":[{"_id":"LaEr"}],"ec_funded":1,"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1606.03076"}],"publist_id":"6935","oa":1,"oa_version":"Submitted Version","quality_controlled":"1"},{"external_id":{"isi":["000413231900011"]},"month":"11","article_processing_charge":"No","publication":"Trends in Ecology and Evolution","date_published":"2017-11-01T00:00:00Z","publication_status":"published","scopus_import":"1","date_updated":"2023-09-27T14:15:15Z","page":"861 - 872","language":[{"iso":"eng"}],"author":[{"first_name":"Patrick","last_name":"Kennedy","full_name":"Kennedy, Patrick"},{"full_name":"Baron, Gemma","first_name":"Gemma","last_name":"Baron"},{"first_name":"Bitao","last_name":"Qiu","full_name":"Qiu, Bitao"},{"first_name":"Dalial","last_name":"Freitak","full_name":"Freitak, Dalial"},{"full_name":"Helantera, Heikki","last_name":"Helantera","first_name":"Heikki"},{"first_name":"Edmund","last_name":"Hunt","full_name":"Hunt, Edmund"},{"full_name":"Manfredini, Fabio","last_name":"Manfredini","first_name":"Fabio"},{"last_name":"O'Shea Wheller","first_name":"Thomas","full_name":"O'Shea Wheller, Thomas"},{"full_name":"Patalano, Solenn","first_name":"Solenn","last_name":"Patalano"},{"id":"3C7F4840-F248-11E8-B48F-1D18A9856A87","first_name":"Christopher","last_name":"Pull","full_name":"Pull, Christopher","orcid":"0000-0003-1122-3982"},{"full_name":"Sasaki, Takao","last_name":"Sasaki","first_name":"Takao"},{"last_name":"Taylor","first_name":"Daisy","full_name":"Taylor, Daisy"},{"full_name":"Wyatt, Christopher","first_name":"Christopher","last_name":"Wyatt"},{"last_name":"Sumner","first_name":"Seirian","full_name":"Sumner, Seirian"}],"_id":"734","type":"journal_article","publication_identifier":{"issn":["01695347"]},"department":[{"_id":"SyCr"}],"related_material":{"record":[{"status":"public","id":"819","relation":"dissertation_contains"}]},"issue":"11","publist_id":"6933","file":[{"relation":"main_file","date_updated":"2020-07-14T12:47:56Z","creator":"dernst","checksum":"c8f49309ed9436201814fa7153d66a99","file_size":15018382,"file_id":"7842","access_level":"open_access","file_name":"2017_TrendsEcology_Kennedy.pdf","date_created":"2020-05-14T16:22:27Z","content_type":"application/pdf"}],"oa_version":"Submitted Version","quality_controlled":"1","oa":1,"volume":32,"citation":{"short":"P. Kennedy, G. Baron, B. Qiu, D. Freitak, H. Helantera, E. Hunt, F. Manfredini, T. O’Shea Wheller, S. Patalano, C. Pull, T. Sasaki, D. Taylor, C. Wyatt, S. Sumner, Trends in Ecology and Evolution 32 (2017) 861–872.","ista":"Kennedy P, Baron G, Qiu B, Freitak D, Helantera H, Hunt E, Manfredini F, O’Shea Wheller T, Patalano S, Pull C, Sasaki T, Taylor D, Wyatt C, Sumner S. 2017. Deconstructing superorganisms and societies to address big questions in biology. Trends in Ecology and Evolution. 32(11), 861–872.","apa":"Kennedy, P., Baron, G., Qiu, B., Freitak, D., Helantera, H., Hunt, E., … Sumner, S. (2017). Deconstructing superorganisms and societies to address big questions in biology. <i>Trends in Ecology and Evolution</i>. Cell Press. <a href=\"https://doi.org/10.1016/j.tree.2017.08.004\">https://doi.org/10.1016/j.tree.2017.08.004</a>","ieee":"P. Kennedy <i>et al.</i>, “Deconstructing superorganisms and societies to address big questions in biology,” <i>Trends in Ecology and Evolution</i>, vol. 32, no. 11. Cell Press, pp. 861–872, 2017.","chicago":"Kennedy, Patrick, Gemma Baron, Bitao Qiu, Dalial Freitak, Heikki Helantera, Edmund Hunt, Fabio Manfredini, et al. “Deconstructing Superorganisms and Societies to Address Big Questions in Biology.” <i>Trends in Ecology and Evolution</i>. Cell Press, 2017. <a href=\"https://doi.org/10.1016/j.tree.2017.08.004\">https://doi.org/10.1016/j.tree.2017.08.004</a>.","mla":"Kennedy, Patrick, et al. “Deconstructing Superorganisms and Societies to Address Big Questions in Biology.” <i>Trends in Ecology and Evolution</i>, vol. 32, no. 11, Cell Press, 2017, pp. 861–72, doi:<a href=\"https://doi.org/10.1016/j.tree.2017.08.004\">10.1016/j.tree.2017.08.004</a>.","ama":"Kennedy P, Baron G, Qiu B, et al. Deconstructing superorganisms and societies to address big questions in biology. <i>Trends in Ecology and Evolution</i>. 2017;32(11):861-872. doi:<a href=\"https://doi.org/10.1016/j.tree.2017.08.004\">10.1016/j.tree.2017.08.004</a>"},"doi":"10.1016/j.tree.2017.08.004","status":"public","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","title":"Deconstructing superorganisms and societies to address big questions in biology","isi":1,"has_accepted_license":"1","ddc":["570"],"intvolume":"        32","abstract":[{"lang":"eng","text":"Social insect societies are long-standing models for understanding social behaviour and evolution. Unlike other advanced biological societies (such as the multicellular body), the component parts of social insect societies can be easily deconstructed and manipulated. Recent methodological and theoretical innovations have exploited this trait to address an expanded range of biological questions. We illustrate the broadening range of biological insight coming from social insect biology with four examples. These new frontiers promote open-minded, interdisciplinary exploration of one of the richest and most complex of biological phenomena: sociality."}],"publisher":"Cell Press","file_date_updated":"2020-07-14T12:47:56Z","date_created":"2018-12-11T11:48:13Z","article_type":"original","day":"01","year":"2017"},{"oa_version":"None","quality_controlled":"1","related_material":{"record":[{"id":"961","status":"public","relation":"dissertation_contains"},{"status":"public","id":"8350","relation":"dissertation_contains"}]},"publist_id":"6934","issue":"2","department":[{"_id":"CaHe"},{"_id":"CaGu"},{"_id":"GaTk"}],"ec_funded":1,"publication_identifier":{"issn":["15345807"]},"_id":"735","type":"journal_article","language":[{"iso":"eng"}],"author":[{"last_name":"Barone","first_name":"Vanessa","id":"419EECCC-F248-11E8-B48F-1D18A9856A87","full_name":"Barone, Vanessa","orcid":"0000-0003-2676-3367"},{"full_name":"Lang, Moritz","id":"29E0800A-F248-11E8-B48F-1D18A9856A87","last_name":"Lang","first_name":"Moritz"},{"full_name":"Krens, Gabriel","orcid":"0000-0003-4761-5996","last_name":"Krens","first_name":"Gabriel","id":"2B819732-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Saurabh","last_name":"Pradhan","full_name":"Pradhan, Saurabh"},{"full_name":"Shamipour, Shayan","id":"40B34FE2-F248-11E8-B48F-1D18A9856A87","last_name":"Shamipour","first_name":"Shayan"},{"last_name":"Sako","first_name":"Keisuke","id":"3BED66BE-F248-11E8-B48F-1D18A9856A87","full_name":"Sako, Keisuke","orcid":"0000-0002-6453-8075"},{"id":"2F74BCDE-F248-11E8-B48F-1D18A9856A87","last_name":"Sikora","first_name":"Mateusz K","full_name":"Sikora, Mateusz K"},{"first_name":"Calin C","last_name":"Guet","id":"47F8433E-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-6220-2052","full_name":"Guet, Calin C"},{"first_name":"Carl-Philipp J","last_name":"Heisenberg","id":"39427864-F248-11E8-B48F-1D18A9856A87","full_name":"Heisenberg, Carl-Philipp J","orcid":"0000-0002-0912-4566"}],"publication_status":"published","scopus_import":"1","date_published":"2017-10-23T00:00:00Z","publication":"Developmental Cell","article_processing_charge":"No","page":"198 - 211","date_updated":"2024-03-25T23:30:21Z","external_id":{"isi":["000413443700011"]},"month":"10","year":"2017","day":"23","date_created":"2018-12-11T11:48:13Z","project":[{"grant_number":"291734","call_identifier":"FP7","name":"International IST Postdoc Fellowship Programme","_id":"25681D80-B435-11E9-9278-68D0E5697425"},{"_id":"252DD2A6-B435-11E9-9278-68D0E5697425","name":"Cell segregation in gastrulation: the role of cell fate specification","call_identifier":"FWF","grant_number":"I2058"}],"publisher":"Cell Press","intvolume":"        43","abstract":[{"text":"Cell-cell contact formation constitutes an essential step in evolution, leading to the differentiation of specialized cell types. However, remarkably little is known about whether and how the interplay between contact formation and fate specification affects development. Here, we identify a positive feedback loop between cell-cell contact duration, morphogen signaling, and mesendoderm cell-fate specification during zebrafish gastrulation. We show that long-lasting cell-cell contacts enhance the competence of prechordal plate (ppl) progenitor cells to respond to Nodal signaling, required for ppl cell-fate specification. We further show that Nodal signaling promotes ppl cell-cell contact duration, generating a positive feedback loop between ppl cell-cell contact duration and cell-fate specification. Finally, by combining mathematical modeling and experimentation, we show that this feedback determines whether anterior axial mesendoderm cells become ppl or, instead, turn into endoderm. Thus, the interdependent activities of cell-cell signaling and contact formation control fate diversification within the developing embryo.","lang":"eng"}],"isi":1,"title":"An effective feedback loop between cell-cell contact duration and morphogen signaling determines cell fate","status":"public","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","doi":"10.1016/j.devcel.2017.09.014","volume":43,"citation":{"chicago":"Barone, Vanessa, Moritz Lang, Gabriel Krens, Saurabh Pradhan, Shayan Shamipour, Keisuke Sako, Mateusz K Sikora, Calin C Guet, and Carl-Philipp J Heisenberg. “An Effective Feedback Loop between Cell-Cell Contact Duration and Morphogen Signaling Determines Cell Fate.” <i>Developmental Cell</i>. Cell Press, 2017. <a href=\"https://doi.org/10.1016/j.devcel.2017.09.014\">https://doi.org/10.1016/j.devcel.2017.09.014</a>.","ieee":"V. Barone <i>et al.</i>, “An effective feedback loop between cell-cell contact duration and morphogen signaling determines cell fate,” <i>Developmental Cell</i>, vol. 43, no. 2. Cell Press, pp. 198–211, 2017.","apa":"Barone, V., Lang, M., Krens, G., Pradhan, S., Shamipour, S., Sako, K., … Heisenberg, C.-P. J. (2017). An effective feedback loop between cell-cell contact duration and morphogen signaling determines cell fate. <i>Developmental Cell</i>. Cell Press. <a href=\"https://doi.org/10.1016/j.devcel.2017.09.014\">https://doi.org/10.1016/j.devcel.2017.09.014</a>","ista":"Barone V, Lang M, Krens G, Pradhan S, Shamipour S, Sako K, Sikora MK, Guet CC, Heisenberg C-PJ. 2017. An effective feedback loop between cell-cell contact duration and morphogen signaling determines cell fate. Developmental Cell. 43(2), 198–211.","short":"V. Barone, M. Lang, G. Krens, S. Pradhan, S. Shamipour, K. Sako, M.K. Sikora, C.C. Guet, C.-P.J. Heisenberg, Developmental Cell 43 (2017) 198–211.","ama":"Barone V, Lang M, Krens G, et al. An effective feedback loop between cell-cell contact duration and morphogen signaling determines cell fate. <i>Developmental Cell</i>. 2017;43(2):198-211. doi:<a href=\"https://doi.org/10.1016/j.devcel.2017.09.014\">10.1016/j.devcel.2017.09.014</a>","mla":"Barone, Vanessa, et al. “An Effective Feedback Loop between Cell-Cell Contact Duration and Morphogen Signaling Determines Cell Fate.” <i>Developmental Cell</i>, vol. 43, no. 2, Cell Press, 2017, pp. 198–211, doi:<a href=\"https://doi.org/10.1016/j.devcel.2017.09.014\">10.1016/j.devcel.2017.09.014</a>."}},{"external_id":{"isi":["000414761700002"]},"pubrep_id":"881","month":"11","scopus_import":"1","date_published":"2017-11-01T00:00:00Z","publication_status":"published","publication":"Brain Structure and Function","article_processing_charge":"No","page":"3375 - 3393","date_updated":"2023-09-27T14:14:51Z","language":[{"iso":"eng"}],"author":[{"full_name":"Rubio, María","first_name":"María","last_name":"Rubio"},{"full_name":"Matsui, Ko","last_name":"Matsui","first_name":"Ko"},{"full_name":"Fukazawa, Yugo","last_name":"Fukazawa","first_name":"Yugo"},{"first_name":"Naomi","last_name":"Kamasawa","full_name":"Kamasawa, Naomi"},{"first_name":"Harumi","last_name":"Harada","id":"2E55CDF2-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-7429-7896","full_name":"Harada, Harumi"},{"full_name":"Itakura, Makoto","last_name":"Itakura","first_name":"Makoto"},{"full_name":"Molnár, Elek","first_name":"Elek","last_name":"Molnár"},{"full_name":"Abe, Manabu","first_name":"Manabu","last_name":"Abe"},{"full_name":"Sakimura, Kenji","first_name":"Kenji","last_name":"Sakimura"},{"id":"499F3ABC-F248-11E8-B48F-1D18A9856A87","last_name":"Shigemoto","first_name":"Ryuichi","orcid":"0000-0001-8761-9444","full_name":"Shigemoto, Ryuichi"}],"_id":"736","type":"journal_article","publication_identifier":{"issn":["18632653"]},"department":[{"_id":"RySh"}],"tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"publist_id":"6932","issue":"8","file":[{"access_level":"open_access","file_id":"4806","file_size":4011126,"checksum":"73787a22507de8fb585bb598e1418ca7","content_type":"application/pdf","date_created":"2018-12-12T10:10:20Z","file_name":"IST-2017-881-v1+1_s00429-017-1408-0.pdf","relation":"main_file","date_updated":"2020-07-14T12:47:56Z","creator":"system"}],"quality_controlled":"1","oa":1,"oa_version":"Published Version","volume":222,"citation":{"apa":"Rubio, M., Matsui, K., Fukazawa, Y., Kamasawa, N., Harada, H., Itakura, M., … Shigemoto, R. (2017). The number and distribution of AMPA receptor channels containing fast kinetic GluA3 and GluA4 subunits at auditory nerve synapses depend on the target cells. <i>Brain Structure and Function</i>. Springer. <a href=\"https://doi.org/10.1007/s00429-017-1408-0\">https://doi.org/10.1007/s00429-017-1408-0</a>","ieee":"M. Rubio <i>et al.</i>, “The number and distribution of AMPA receptor channels containing fast kinetic GluA3 and GluA4 subunits at auditory nerve synapses depend on the target cells,” <i>Brain Structure and Function</i>, vol. 222, no. 8. Springer, pp. 3375–3393, 2017.","chicago":"Rubio, María, Ko Matsui, Yugo Fukazawa, Naomi Kamasawa, Harumi Harada, Makoto Itakura, Elek Molnár, Manabu Abe, Kenji Sakimura, and Ryuichi Shigemoto. “The Number and Distribution of AMPA Receptor Channels Containing Fast Kinetic GluA3 and GluA4 Subunits at Auditory Nerve Synapses Depend on the Target Cells.” <i>Brain Structure and Function</i>. Springer, 2017. <a href=\"https://doi.org/10.1007/s00429-017-1408-0\">https://doi.org/10.1007/s00429-017-1408-0</a>.","short":"M. Rubio, K. Matsui, Y. Fukazawa, N. Kamasawa, H. Harada, M. Itakura, E. Molnár, M. Abe, K. Sakimura, R. Shigemoto, Brain Structure and Function 222 (2017) 3375–3393.","ista":"Rubio M, Matsui K, Fukazawa Y, Kamasawa N, Harada H, Itakura M, Molnár E, Abe M, Sakimura K, Shigemoto R. 2017. The number and distribution of AMPA receptor channels containing fast kinetic GluA3 and GluA4 subunits at auditory nerve synapses depend on the target cells. Brain Structure and Function. 222(8), 3375–3393.","ama":"Rubio M, Matsui K, Fukazawa Y, et al. The number and distribution of AMPA receptor channels containing fast kinetic GluA3 and GluA4 subunits at auditory nerve synapses depend on the target cells. <i>Brain Structure and Function</i>. 2017;222(8):3375-3393. doi:<a href=\"https://doi.org/10.1007/s00429-017-1408-0\">10.1007/s00429-017-1408-0</a>","mla":"Rubio, María, et al. “The Number and Distribution of AMPA Receptor Channels Containing Fast Kinetic GluA3 and GluA4 Subunits at Auditory Nerve Synapses Depend on the Target Cells.” <i>Brain Structure and Function</i>, vol. 222, no. 8, Springer, 2017, pp. 3375–93, doi:<a href=\"https://doi.org/10.1007/s00429-017-1408-0\">10.1007/s00429-017-1408-0</a>."},"doi":"10.1007/s00429-017-1408-0","title":"The number and distribution of AMPA receptor channels containing fast kinetic GluA3 and GluA4 subunits at auditory nerve synapses depend on the target cells","status":"public","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","isi":1,"has_accepted_license":"1","ddc":["571"],"intvolume":"       222","abstract":[{"text":"The neurotransmitter receptor subtype, number, density, and distribution relative to the location of transmitter release sites are key determinants of signal transmission. AMPA-type ionotropic glutamate receptors (AMPARs) containing GluA3 and GluA4 subunits are prominently expressed in subsets of neurons capable of firing action potentials at high frequencies, such as auditory relay neurons. The auditory nerve (AN) forms glutamatergic synapses on two types of relay neurons, bushy cells (BCs) and fusiform cells (FCs) of the cochlear nucleus. AN-BC and AN-FC synapses have distinct kinetics; thus, we investigated whether the number, density, and localization of GluA3 and GluA4 subunits in these synapses are differentially organized using quantitative freeze-fracture replica immunogold labeling. We identify a positive correlation between the number of AMPARs and the size of AN-BC and AN-FC synapses. Both types of AN synapses have similar numbers of AMPARs; however, the AN-BC have a higher density of AMPARs than AN-FC synapses, because the AN-BC synapses are smaller. A higher number and density of GluA3 subunits are observed at AN-BC synapses, whereas a higher number and density of GluA4 subunits are observed at AN-FC synapses. The intrasynaptic distribution of immunogold labeling revealed that AMPAR subunits, particularly GluA3, are concentrated at the center of the AN-BC synapses. The central distribution of AMPARs is absent in GluA3-knockout mice, and gold particles are evenly distributed along the postsynaptic density. GluA4 gold labeling was homogenously distributed along both synapse types. Thus, GluA3 and GluA4 subunits are distributed at AN synapses in a target-cell-dependent manner.","lang":"eng"}],"publisher":"Springer","file_date_updated":"2020-07-14T12:47:56Z","date_created":"2018-12-11T11:48:14Z","year":"2017","day":"01"},{"doi":"10.1016/j.ymthe.2016.10.005","volume":25,"citation":{"apa":"Smole, A., Lainšček, D., Bezeljak, U., Horvat, S., &#38; Jerala, R. (2017). A synthetic mammalian therapeutic gene circuit for sensing and suppressing inflammation. <i>Molecular Therapy</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.ymthe.2016.10.005\">https://doi.org/10.1016/j.ymthe.2016.10.005</a>","ieee":"A. Smole, D. Lainšček, U. Bezeljak, S. Horvat, and R. Jerala, “A synthetic mammalian therapeutic gene circuit for sensing and suppressing inflammation,” <i>Molecular Therapy</i>, vol. 25, no. 1. Elsevier, pp. 102–119, 2017.","chicago":"Smole, Anže, Duško Lainšček, Urban Bezeljak, Simon Horvat, and Roman Jerala. “A Synthetic Mammalian Therapeutic Gene Circuit for Sensing and Suppressing Inflammation.” <i>Molecular Therapy</i>. Elsevier, 2017. <a href=\"https://doi.org/10.1016/j.ymthe.2016.10.005\">https://doi.org/10.1016/j.ymthe.2016.10.005</a>.","ista":"Smole A, Lainšček D, Bezeljak U, Horvat S, Jerala R. 2017. A synthetic mammalian therapeutic gene circuit for sensing and suppressing inflammation. Molecular Therapy. 25(1), 102–119.","short":"A. Smole, D. Lainšček, U. Bezeljak, S. Horvat, R. Jerala, Molecular Therapy 25 (2017) 102–119.","ama":"Smole A, Lainšček D, Bezeljak U, Horvat S, Jerala R. A synthetic mammalian therapeutic gene circuit for sensing and suppressing inflammation. <i>Molecular Therapy</i>. 2017;25(1):102-119. doi:<a href=\"https://doi.org/10.1016/j.ymthe.2016.10.005\">10.1016/j.ymthe.2016.10.005</a>","mla":"Smole, Anže, et al. “A Synthetic Mammalian Therapeutic Gene Circuit for Sensing and Suppressing Inflammation.” <i>Molecular Therapy</i>, vol. 25, no. 1, Elsevier, 2017, pp. 102–19, doi:<a href=\"https://doi.org/10.1016/j.ymthe.2016.10.005\">10.1016/j.ymthe.2016.10.005</a>."},"license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","title":"A synthetic mammalian therapeutic gene circuit for sensing and suppressing inflammation","status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publisher":"Elsevier","ddc":["570"],"has_accepted_license":"1","intvolume":"        25","abstract":[{"lang":"eng","text":"Inflammation, which is a highly regulated host response against danger signals, may be harmful if it is excessive and deregulated. Ideally, anti-inflammatory therapy should autonomously commence as soon as possible after the onset of inflammation, should be controllable by a physician, and should not systemically block beneficial immune response in the long term. We describe a genetically encoded anti-inflammatory mammalian cell device based on a modular engineered genetic circuit comprising a sensor, an amplifier, a “thresholder” to restrict activation of a positive-feedback loop, a combination of advanced clinically used biopharmaceutical proteins, and orthogonal regulatory elements that linked modules into the functional device. This genetic circuit was autonomously activated by inflammatory signals, including endogenous cecal ligation and puncture (CLP)-induced inflammation in mice and serum from a systemic juvenile idiopathic arthritis (sIJA) patient, and could be reset externally by a chemical signal. The microencapsulated anti-inflammatory device significantly reduced the pathology in dextran sodium sulfate (DSS)-induced acute murine colitis, demonstrating a synthetic immunological approach for autonomous anti-inflammatory therapy."}],"article_type":"original","year":"2017","day":"01","date_created":"2020-01-25T15:55:39Z","file_date_updated":"2020-07-14T12:47:56Z","publication_status":"published","date_published":"2017-01-01T00:00:00Z","article_processing_charge":"No","publication":"Molecular Therapy","date_updated":"2021-01-12T08:13:14Z","page":"102-119","external_id":{"pmid":["28129106"]},"month":"01","_id":"7360","type":"journal_article","language":[{"iso":"eng"}],"author":[{"full_name":"Smole, Anže","last_name":"Smole","first_name":"Anže"},{"last_name":"Lainšček","first_name":"Duško","full_name":"Lainšček, Duško"},{"id":"2A58201A-F248-11E8-B48F-1D18A9856A87","last_name":"Bezeljak","first_name":"Urban","full_name":"Bezeljak, Urban","orcid":"0000-0003-1365-5631"},{"first_name":"Simon","last_name":"Horvat","full_name":"Horvat, Simon"},{"first_name":"Roman","last_name":"Jerala","full_name":"Jerala, Roman"}],"department":[{"_id":"MaLo"}],"publication_identifier":{"issn":["1525-0016"]},"file":[{"date_created":"2020-03-03T10:55:13Z","file_name":"2017_MolecularTherapy_Smole.pdf","content_type":"application/pdf","file_size":3404806,"file_id":"7561","checksum":"ea8b1b28606dd1edab7379ba4fa3641f","access_level":"open_access","creator":"dernst","relation":"main_file","date_updated":"2020-07-14T12:47:56Z"}],"oa":1,"oa_version":"Published Version","quality_controlled":"1","tmp":{"name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","image":"/images/cc_by_nc_nd.png","short":"CC BY-NC-ND (4.0)"},"pmid":1,"issue":"1"},{"isi":1,"title":"A new topology on the universal path space","status":"public","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","doi":"10.1016/j.topol.2017.09.015","citation":{"ieee":"Z. Virk and A. Zastrow, “A new topology on the universal path space,” <i>Topology and its Applications</i>, vol. 231. Elsevier, pp. 186–196, 2017.","chicago":"Virk, Ziga, and Andreas Zastrow. “A New Topology on the Universal Path Space.” <i>Topology and Its Applications</i>. Elsevier, 2017. <a href=\"https://doi.org/10.1016/j.topol.2017.09.015\">https://doi.org/10.1016/j.topol.2017.09.015</a>.","apa":"Virk, Z., &#38; Zastrow, A. (2017). A new topology on the universal path space. <i>Topology and Its Applications</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.topol.2017.09.015\">https://doi.org/10.1016/j.topol.2017.09.015</a>","short":"Z. Virk, A. Zastrow, Topology and Its Applications 231 (2017) 186–196.","ista":"Virk Z, Zastrow A. 2017. A new topology on the universal path space. Topology and its Applications. 231, 186–196.","ama":"Virk Z, Zastrow A. A new topology on the universal path space. <i>Topology and its Applications</i>. 2017;231:186-196. doi:<a href=\"https://doi.org/10.1016/j.topol.2017.09.015\">10.1016/j.topol.2017.09.015</a>","mla":"Virk, Ziga, and Andreas Zastrow. “A New Topology on the Universal Path Space.” <i>Topology and Its Applications</i>, vol. 231, Elsevier, 2017, pp. 186–96, doi:<a href=\"https://doi.org/10.1016/j.topol.2017.09.015\">10.1016/j.topol.2017.09.015</a>."},"volume":231,"year":"2017","day":"01","date_created":"2018-12-11T11:48:14Z","publisher":"Elsevier","abstract":[{"text":"We generalize Brazas’ topology on the fundamental group to the whole universal path space X˜ i.e., to the set of homotopy classes of all based paths. We develop basic properties of the new notion and provide a complete comparison of the obtained topology with the established topologies, in particular with the Lasso topology and the CO topology, i.e., the topology that is induced by the compact-open topology. It turns out that the new topology is the finest topology contained in the CO topology, for which the action of the fundamental group on the universal path space is a continuous group action.","lang":"eng"}],"intvolume":"       231","type":"journal_article","_id":"737","author":[{"last_name":"Virk","first_name":"Ziga","id":"2E36B656-F248-11E8-B48F-1D18A9856A87","full_name":"Virk, Ziga"},{"first_name":"Andreas","last_name":"Zastrow","full_name":"Zastrow, Andreas"}],"language":[{"iso":"eng"}],"page":"186 - 196","date_updated":"2023-09-27T12:53:01Z","date_published":"2017-11-01T00:00:00Z","scopus_import":"1","publication_status":"published","publication":"Topology and its Applications","article_processing_charge":"No","month":"11","external_id":{"isi":["000413889100012"]},"quality_controlled":"1","oa_version":"None","publist_id":"6930","department":[{"_id":"HeEd"}],"publication_identifier":{"issn":["01668641"]}},{"date_created":"2018-12-11T11:48:15Z","project":[{"call_identifier":"FWF","name":"Structure of the Excitation Spectrum for Many-Body Quantum Systems","_id":"25C878CE-B435-11E9-9278-68D0E5697425","grant_number":"P27533_N27"}],"day":"01","year":"2017","abstract":[{"lang":"eng","text":"We study the norm approximation to the Schrödinger dynamics of N bosons in with an interaction potential of the form . Assuming that in the initial state the particles outside of the condensate form a quasi-free state with finite kinetic energy, we show that in the large N limit, the fluctuations around the condensate can be effectively described using Bogoliubov approximation for all . The range of β is expected to be optimal for this large class of initial states."}],"intvolume":"       108","publisher":"Elsevier","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","status":"public","title":"A note on the validity of Bogoliubov correction to mean field dynamics","isi":1,"volume":108,"citation":{"ama":"Nam P, Napiórkowski MM. A note on the validity of Bogoliubov correction to mean field dynamics. <i>Journal de Mathématiques Pures et Appliquées</i>. 2017;108(5):662-688. doi:<a href=\"https://doi.org/10.1016/j.matpur.2017.05.013\">10.1016/j.matpur.2017.05.013</a>","mla":"Nam, Phan, and Marcin M. Napiórkowski. “A Note on the Validity of Bogoliubov Correction to Mean Field Dynamics.” <i>Journal de Mathématiques Pures et Appliquées</i>, vol. 108, no. 5, Elsevier, 2017, pp. 662–88, doi:<a href=\"https://doi.org/10.1016/j.matpur.2017.05.013\">10.1016/j.matpur.2017.05.013</a>.","apa":"Nam, P., &#38; Napiórkowski, M. M. (2017). A note on the validity of Bogoliubov correction to mean field dynamics. <i>Journal de Mathématiques Pures et Appliquées</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.matpur.2017.05.013\">https://doi.org/10.1016/j.matpur.2017.05.013</a>","chicago":"Nam, Phan, and Marcin M Napiórkowski. “A Note on the Validity of Bogoliubov Correction to Mean Field Dynamics.” <i>Journal de Mathématiques Pures et Appliquées</i>. Elsevier, 2017. <a href=\"https://doi.org/10.1016/j.matpur.2017.05.013\">https://doi.org/10.1016/j.matpur.2017.05.013</a>.","ieee":"P. Nam and M. M. Napiórkowski, “A note on the validity of Bogoliubov correction to mean field dynamics,” <i>Journal de Mathématiques Pures et Appliquées</i>, vol. 108, no. 5. Elsevier, pp. 662–688, 2017.","ista":"Nam P, Napiórkowski MM. 2017. A note on the validity of Bogoliubov correction to mean field dynamics. Journal de Mathématiques Pures et Appliquées. 108(5), 662–688.","short":"P. Nam, M.M. Napiórkowski, Journal de Mathématiques Pures et Appliquées 108 (2017) 662–688."},"doi":"10.1016/j.matpur.2017.05.013","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1604.05240"}],"issue":"5","publist_id":"6928","quality_controlled":"1","oa_version":"Submitted Version","oa":1,"publication_identifier":{"issn":["00217824"]},"department":[{"_id":"RoSe"}],"author":[{"id":"404092F4-F248-11E8-B48F-1D18A9856A87","first_name":"Phan","last_name":"Nam","full_name":"Nam, Phan"},{"full_name":"Napiórkowski, Marcin M","last_name":"Napiórkowski","first_name":"Marcin M","id":"4197AD04-F248-11E8-B48F-1D18A9856A87"}],"language":[{"iso":"eng"}],"_id":"739","type":"journal_article","external_id":{"isi":["000414113600003"]},"month":"11","article_processing_charge":"No","publication":"Journal de Mathématiques Pures et Appliquées","scopus_import":"1","publication_status":"published","date_published":"2017-11-01T00:00:00Z","date_updated":"2023-09-27T12:52:07Z","page":"662 - 688"},{"doi":"10.1002/wdev.288","citation":{"mla":"Shigemoto, Ryuichi, and Maximilian A. Jösch. “The Genetic Encoded Toolbox for Electron Microscopy and Connectomics.” <i>WIREs Developmental Biology</i>, vol. 6, no. 6, e288, Wiley-Blackwell, 2017, doi:<a href=\"https://doi.org/10.1002/wdev.288\">10.1002/wdev.288</a>.","ama":"Shigemoto R, Jösch MA. The genetic encoded toolbox for electron microscopy and connectomics. <i>WIREs Developmental Biology</i>. 2017;6(6). doi:<a href=\"https://doi.org/10.1002/wdev.288\">10.1002/wdev.288</a>","short":"R. Shigemoto, M.A. Jösch, WIREs Developmental Biology 6 (2017).","ista":"Shigemoto R, Jösch MA. 2017. The genetic encoded toolbox for electron microscopy and connectomics. WIREs Developmental Biology. 6(6), e288.","apa":"Shigemoto, R., &#38; Jösch, M. A. (2017). The genetic encoded toolbox for electron microscopy and connectomics. <i>WIREs Developmental Biology</i>. Wiley-Blackwell. <a href=\"https://doi.org/10.1002/wdev.288\">https://doi.org/10.1002/wdev.288</a>","chicago":"Shigemoto, Ryuichi, and Maximilian A Jösch. “The Genetic Encoded Toolbox for Electron Microscopy and Connectomics.” <i>WIREs Developmental Biology</i>. Wiley-Blackwell, 2017. <a href=\"https://doi.org/10.1002/wdev.288\">https://doi.org/10.1002/wdev.288</a>.","ieee":"R. Shigemoto and M. A. Jösch, “The genetic encoded toolbox for electron microscopy and connectomics,” <i>WIREs Developmental Biology</i>, vol. 6, no. 6. Wiley-Blackwell, 2017."},"volume":6,"license":"https://creativecommons.org/licenses/by-nc/4.0/","isi":1,"status":"public","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","title":"The genetic encoded toolbox for electron microscopy and connectomics","publisher":"Wiley-Blackwell","intvolume":"         6","abstract":[{"lang":"eng","text":"Developments in bioengineering and molecular biology have introduced a palette of genetically encoded probes for identification of specific cell populations in electron microscopy. These probes can be targeted to distinct cellular compartments, rendering them electron dense through a subsequent chemical reaction. These electron densities strongly increase the local contrast in samples prepared for electron microscopy, allowing three major advances in ultrastructural mapping of circuits: genetic identification of circuit components, targeted imaging of regions of interest and automated analysis of the tagged circuits. Together, the gains from these advances can decrease the time required for the analysis of targeted circuit motifs by over two orders of magnitude. These genetic encoded tags for electron microscopy promise to simplify the analysis of circuit motifs and become a central tool for structure‐function studies of synaptic connections in the brain. We review the current state‐of‐the‐art with an emphasis on connectomics, the quantitative analysis of neuronal structures and motifs."}],"ddc":["570"],"has_accepted_license":"1","day":"11","year":"2017","article_type":"original","file_date_updated":"2020-07-14T12:47:57Z","date_created":"2018-12-11T11:48:15Z","date_updated":"2023-09-27T12:51:41Z","article_processing_charge":"No","publication":"WIREs Developmental Biology","scopus_import":"1","publication_status":"published","date_published":"2017-08-11T00:00:00Z","month":"08","external_id":{"pmid":["28800674"],"isi":["000412827400005"]},"type":"journal_article","_id":"740","language":[{"iso":"eng"}],"author":[{"orcid":"0000-0001-8761-9444","full_name":"Shigemoto, Ryuichi","first_name":"Ryuichi","last_name":"Shigemoto","id":"499F3ABC-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Jösch, Maximilian A","orcid":"0000-0002-3937-1330","first_name":"Maximilian A","last_name":"Jösch","id":"2BD278E6-F248-11E8-B48F-1D18A9856A87"}],"department":[{"_id":"RySh"},{"_id":"MaJö"}],"publication_identifier":{"issn":["17597684"]},"oa":1,"quality_controlled":"1","oa_version":"Submitted Version","file":[{"creator":"dernst","date_updated":"2020-07-14T12:47:57Z","relation":"main_file","content_type":"application/pdf","date_created":"2019-11-19T07:36:18Z","file_name":"2017_WIREs_Shigemoto.pdf","access_level":"open_access","file_size":1647787,"file_id":"7045","checksum":"a9370f27b1591773b7a0de299bc81c8c"}],"issue":"6","pmid":1,"publist_id":"6927","tmp":{"short":"CC BY-NC (4.0)","image":"/images/cc_by_nc.png","legal_code_url":"https://creativecommons.org/licenses/by-nc/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)"},"article_number":"e288"},{"date_created":"2018-12-11T11:48:15Z","file_date_updated":"2020-07-14T12:47:57Z","project":[{"grant_number":"694227","call_identifier":"H2020","_id":"25C6DC12-B435-11E9-9278-68D0E5697425","name":"Analysis of quantum many-body systems"},{"name":"Structure of the Excitation Spectrum for Many-Body Quantum Systems","_id":"25C878CE-B435-11E9-9278-68D0E5697425","call_identifier":"FWF","grant_number":"P27533_N27"}],"day":"01","year":"2017","has_accepted_license":"1","ddc":["539"],"abstract":[{"lang":"eng","text":"We prove that a system of N fermions interacting with an additional particle via point interactions is stable if the ratio of the mass of the additional particle to the one of the fermions is larger than some critical m*. The value of m* is independent of N and turns out to be less than 1. This fact has important implications for the stability of the unitary Fermi gas. We also characterize the domain of the Hamiltonian of this model, and establish the validity of the Tan relations for all wave functions in the domain."}],"intvolume":"       356","publisher":"Springer","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","status":"public","title":"Stability of a fermionic N+1 particle system with point interactions","isi":1,"volume":356,"citation":{"apa":"Moser, T., &#38; Seiringer, R. (2017). Stability of a fermionic N+1 particle system with point interactions. <i>Communications in Mathematical Physics</i>. Springer. <a href=\"https://doi.org/10.1007/s00220-017-2980-0\">https://doi.org/10.1007/s00220-017-2980-0</a>","ieee":"T. Moser and R. Seiringer, “Stability of a fermionic N+1 particle system with point interactions,” <i>Communications in Mathematical Physics</i>, vol. 356, no. 1. Springer, pp. 329–355, 2017.","chicago":"Moser, Thomas, and Robert Seiringer. “Stability of a Fermionic N+1 Particle System with Point Interactions.” <i>Communications in Mathematical Physics</i>. Springer, 2017. <a href=\"https://doi.org/10.1007/s00220-017-2980-0\">https://doi.org/10.1007/s00220-017-2980-0</a>.","ista":"Moser T, Seiringer R. 2017. Stability of a fermionic N+1 particle system with point interactions. Communications in Mathematical Physics. 356(1), 329–355.","short":"T. Moser, R. Seiringer, Communications in Mathematical Physics 356 (2017) 329–355.","ama":"Moser T, Seiringer R. Stability of a fermionic N+1 particle system with point interactions. <i>Communications in Mathematical Physics</i>. 2017;356(1):329-355. doi:<a href=\"https://doi.org/10.1007/s00220-017-2980-0\">10.1007/s00220-017-2980-0</a>","mla":"Moser, Thomas, and Robert Seiringer. “Stability of a Fermionic N+1 Particle System with Point Interactions.” <i>Communications in Mathematical Physics</i>, vol. 356, no. 1, Springer, 2017, pp. 329–55, doi:<a href=\"https://doi.org/10.1007/s00220-017-2980-0\">10.1007/s00220-017-2980-0</a>."},"doi":"10.1007/s00220-017-2980-0","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"related_material":{"record":[{"relation":"dissertation_contains","id":"52","status":"public"}]},"issue":"1","publist_id":"6926","file":[{"date_updated":"2020-07-14T12:47:57Z","relation":"main_file","creator":"system","checksum":"0fd9435400f91e9b3c5346319a2d24e3","file_size":952639,"file_id":"4841","access_level":"open_access","file_name":"IST-2017-880-v1+1_s00220-017-2980-0.pdf","date_created":"2018-12-12T10:10:50Z","content_type":"application/pdf"}],"oa":1,"oa_version":"Published Version","quality_controlled":"1","publication_identifier":{"issn":["00103616"]},"department":[{"_id":"RoSe"}],"ec_funded":1,"language":[{"iso":"eng"}],"author":[{"full_name":"Moser, Thomas","id":"2B5FC9A4-F248-11E8-B48F-1D18A9856A87","last_name":"Moser","first_name":"Thomas"},{"id":"4AFD0470-F248-11E8-B48F-1D18A9856A87","first_name":"Robert","last_name":"Seiringer","orcid":"0000-0002-6781-0521","full_name":"Seiringer, Robert"}],"_id":"741","type":"journal_article","external_id":{"isi":["000409821300010"]},"month":"11","pubrep_id":"880","publication":"Communications in Mathematical Physics","article_processing_charge":"No","publication_status":"published","date_published":"2017-11-01T00:00:00Z","scopus_import":"1","date_updated":"2023-09-27T12:34:15Z","page":"329 - 355"},{"publication":"Formal Methods in System Design","article_processing_charge":"No","publication_status":"published","date_published":"2017-11-14T00:00:00Z","date_updated":"2023-09-27T12:29:29Z","page":"267 - 269","doi":"10.1007/s10703-017-0307-6","external_id":{"isi":["000415615600001"]},"volume":51,"citation":{"ista":"Gottlob G, Henzinger TA, Weißenbacher G. 2017. Preface of the special issue in memoriam Helmut Veith. Formal Methods in System Design. 51(2), 267–269.","short":"G. Gottlob, T.A. Henzinger, G. Weißenbacher, Formal Methods in System Design 51 (2017) 267–269.","ieee":"G. Gottlob, T. A. Henzinger, and G. Weißenbacher, “Preface of the special issue in memoriam Helmut Veith,” <i>Formal Methods in System Design</i>, vol. 51, no. 2. Springer, pp. 267–269, 2017.","chicago":"Gottlob, Georg, Thomas A Henzinger, and Georg Weißenbacher. “Preface of the Special Issue in Memoriam Helmut Veith.” <i>Formal Methods in System Design</i>. Springer, 2017. <a href=\"https://doi.org/10.1007/s10703-017-0307-6\">https://doi.org/10.1007/s10703-017-0307-6</a>.","apa":"Gottlob, G., Henzinger, T. A., &#38; Weißenbacher, G. (2017). Preface of the special issue in memoriam Helmut Veith. <i>Formal Methods in System Design</i>. Springer. <a href=\"https://doi.org/10.1007/s10703-017-0307-6\">https://doi.org/10.1007/s10703-017-0307-6</a>","mla":"Gottlob, Georg, et al. “Preface of the Special Issue in Memoriam Helmut Veith.” <i>Formal Methods in System Design</i>, vol. 51, no. 2, Springer, 2017, pp. 267–69, doi:<a href=\"https://doi.org/10.1007/s10703-017-0307-6\">10.1007/s10703-017-0307-6</a>.","ama":"Gottlob G, Henzinger TA, Weißenbacher G. Preface of the special issue in memoriam Helmut Veith. <i>Formal Methods in System Design</i>. 2017;51(2):267-269. doi:<a href=\"https://doi.org/10.1007/s10703-017-0307-6\">10.1007/s10703-017-0307-6</a>"},"month":"11","_id":"743","isi":1,"type":"journal_article","language":[{"iso":"eng"}],"status":"public","author":[{"first_name":"Georg","last_name":"Gottlob","full_name":"Gottlob, Georg"},{"last_name":"Henzinger","first_name":"Thomas A","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","full_name":"Henzinger, Thomas A","orcid":"0000−0002−2985−7724"},{"last_name":"Weißenbacher","first_name":"Georg","full_name":"Weißenbacher, Georg"}],"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","title":"Preface of the special issue in memoriam Helmut Veith","department":[{"_id":"ToHe"}],"publisher":"Springer","intvolume":"        51","abstract":[{"text":"This special issue of the Journal on Formal Methods in System Design is dedicated to Prof. Helmut Veith, who unexpectedly passed away in March 2016. Helmut Veith was a brilliant researcher, inspiring collaborator, passionate mentor, generous friend, and valued member of the formal methods community. Helmut was not only known for his numerous and influential contributions in the field of automated verification (most prominently his work on Counterexample-Guided Abstraction Refinement [1,2]), but also for his untiring and passionate efforts for the logic community: he co-organized the Vienna Summer of Logic (an event comprising twelve conferences and numerous workshops which attracted thousands of researchers from all over the world), he initiated the Vienna Center for Logic and Algorithms (which promotes international collaboration on logic and algorithms and organizes outreach events such as the LogicLounge), and he coordinated the Doctoral Program on Logical Methods in Computer Science at TU Wien (currently educating more than 40 doctoral students) and a National Research Network on Rigorous Systems Engineering (uniting fifteen researchers in Austria to address the challenge of building reliable and safe computer\r\nsystems). With his enthusiasm and commitment, Helmut completely reshaped the Austrian research landscape in the field of logic and verification in his few years as a full professor at TU Wien.","lang":"eng"}],"day":"14","year":"2017","oa_version":"None","quality_controlled":"1","date_created":"2018-12-11T11:48:16Z","issue":"2","publist_id":"6924"},{"ddc":["000","570"],"has_accepted_license":"1","abstract":[{"lang":"eng","text":"In evolutionary game theory interactions between individuals are often assumed obligatory. However, in many real-life situations, individuals can decide to opt out of an interaction depending on the information they have about the opponent. We consider a simple evolutionary game theoretic model to study such a scenario, where at each encounter between two individuals the type of the opponent (cooperator/defector) is known with some probability, and where each individual either accepts or opts out of the interaction. If the type of the opponent is unknown, a trustful individual accepts the interaction, whereas a suspicious individual opts out of the interaction. If either of the two individuals opt out both individuals remain without an interaction. We show that in the prisoners dilemma optional interactions along with suspicious behaviour facilitates the emergence of trustful cooperation."}],"intvolume":"       433","publisher":"Elsevier","date_created":"2018-12-11T11:48:16Z","file_date_updated":"2020-07-14T12:47:58Z","project":[{"grant_number":"291734","name":"International IST Postdoc Fellowship Programme","_id":"25681D80-B435-11E9-9278-68D0E5697425","call_identifier":"FP7"},{"call_identifier":"FP7","name":"Quantitative Graph Games: Theory and Applications","_id":"2581B60A-B435-11E9-9278-68D0E5697425","grant_number":"279307"}],"article_type":"original","year":"2017","day":"21","volume":433,"citation":{"ama":"Priklopil T, Chatterjee K, Nowak M. Optional interactions and suspicious behaviour facilitates trustful cooperation in prisoners dilemma. <i> Journal of Theoretical Biology</i>. 2017;433:64-72. doi:<a href=\"https://doi.org/10.1016/j.jtbi.2017.08.025\">10.1016/j.jtbi.2017.08.025</a>","mla":"Priklopil, Tadeas, et al. “Optional Interactions and Suspicious Behaviour Facilitates Trustful Cooperation in Prisoners Dilemma.” <i> Journal of Theoretical Biology</i>, vol. 433, Elsevier, 2017, pp. 64–72, doi:<a href=\"https://doi.org/10.1016/j.jtbi.2017.08.025\">10.1016/j.jtbi.2017.08.025</a>.","apa":"Priklopil, T., Chatterjee, K., &#38; Nowak, M. (2017). Optional interactions and suspicious behaviour facilitates trustful cooperation in prisoners dilemma. <i> Journal of Theoretical Biology</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jtbi.2017.08.025\">https://doi.org/10.1016/j.jtbi.2017.08.025</a>","chicago":"Priklopil, Tadeas, Krishnendu Chatterjee, and Martin Nowak. “Optional Interactions and Suspicious Behaviour Facilitates Trustful Cooperation in Prisoners Dilemma.” <i> Journal of Theoretical Biology</i>. Elsevier, 2017. <a href=\"https://doi.org/10.1016/j.jtbi.2017.08.025\">https://doi.org/10.1016/j.jtbi.2017.08.025</a>.","ieee":"T. Priklopil, K. Chatterjee, and M. Nowak, “Optional interactions and suspicious behaviour facilitates trustful cooperation in prisoners dilemma,” <i> Journal of Theoretical Biology</i>, vol. 433. Elsevier, pp. 64–72, 2017.","short":"T. Priklopil, K. Chatterjee, M. Nowak,  Journal of Theoretical Biology 433 (2017) 64–72.","ista":"Priklopil T, Chatterjee K, Nowak M. 2017. Optional interactions and suspicious behaviour facilitates trustful cooperation in prisoners dilemma.  Journal of Theoretical Biology. 433, 64–72."},"doi":"10.1016/j.jtbi.2017.08.025","title":"Optional interactions and suspicious behaviour facilitates trustful cooperation in prisoners dilemma","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","status":"public","isi":1,"publication_identifier":{"issn":["00225193"]},"department":[{"_id":"KrCh"}],"ec_funded":1,"tmp":{"name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","image":"/images/cc_by_nc_nd.png","short":"CC BY-NC-ND (4.0)"},"publist_id":"6923","pmid":1,"file":[{"creator":"dernst","date_updated":"2020-07-14T12:47:58Z","relation":"main_file","file_name":"2017_JournTheoretBio_Priklopil.pdf","date_created":"2019-11-19T07:57:39Z","content_type":"application/pdf","checksum":"4b43af1615ebf1a861840cb03d8a320c","file_size":537323,"file_id":"7047","access_level":"open_access"}],"oa_version":"Submitted Version","quality_controlled":"1","oa":1,"external_id":{"isi":["000412039800007"],"pmid":["28867224"]},"month":"11","date_published":"2017-11-21T00:00:00Z","scopus_import":"1","publication_status":"published","article_processing_charge":"No","publication":" Journal of Theoretical Biology","page":"64 - 72","date_updated":"2023-09-27T12:29:02Z","language":[{"iso":"eng"}],"author":[{"full_name":"Priklopil, Tadeas","id":"3C869AA0-F248-11E8-B48F-1D18A9856A87","first_name":"Tadeas","last_name":"Priklopil"},{"orcid":"0000-0002-4561-241X","full_name":"Chatterjee, Krishnendu","first_name":"Krishnendu","last_name":"Chatterjee","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Nowak","first_name":"Martin","full_name":"Nowak, Martin"}],"_id":"744","type":"journal_article"},{"isi":1,"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","status":"public","title":"Transition to turbulence in pulsating pipe flow","doi":"10.1017/jfm.2017.620","citation":{"chicago":"Xu, Duo, Sascha Warnecke, Baofang Song, Xingyu Ma, and Björn Hof. “Transition to Turbulence in Pulsating Pipe Flow.” <i>Journal of Fluid Mechanics</i>. Cambridge University Press, 2017. <a href=\"https://doi.org/10.1017/jfm.2017.620\">https://doi.org/10.1017/jfm.2017.620</a>.","ieee":"D. Xu, S. Warnecke, B. Song, X. Ma, and B. Hof, “Transition to turbulence in pulsating pipe flow,” <i>Journal of Fluid Mechanics</i>, vol. 831. Cambridge University Press, pp. 418–432, 2017.","apa":"Xu, D., Warnecke, S., Song, B., Ma, X., &#38; Hof, B. (2017). Transition to turbulence in pulsating pipe flow. <i>Journal of Fluid Mechanics</i>. Cambridge University Press. <a href=\"https://doi.org/10.1017/jfm.2017.620\">https://doi.org/10.1017/jfm.2017.620</a>","short":"D. Xu, S. Warnecke, B. Song, X. Ma, B. Hof, Journal of Fluid Mechanics 831 (2017) 418–432.","ista":"Xu D, Warnecke S, Song B, Ma X, Hof B. 2017. Transition to turbulence in pulsating pipe flow. Journal of Fluid Mechanics. 831, 418–432.","ama":"Xu D, Warnecke S, Song B, Ma X, Hof B. Transition to turbulence in pulsating pipe flow. <i>Journal of Fluid Mechanics</i>. 2017;831:418-432. doi:<a href=\"https://doi.org/10.1017/jfm.2017.620\">10.1017/jfm.2017.620</a>","mla":"Xu, Duo, et al. “Transition to Turbulence in Pulsating Pipe Flow.” <i>Journal of Fluid Mechanics</i>, vol. 831, Cambridge University Press, 2017, pp. 418–32, doi:<a href=\"https://doi.org/10.1017/jfm.2017.620\">10.1017/jfm.2017.620</a>."},"volume":831,"day":"25","year":"2017","project":[{"grant_number":"306589","call_identifier":"FP7","name":"Decoding the complexity of turbulence at its origin","_id":"25152F3A-B435-11E9-9278-68D0E5697425"}],"date_created":"2018-12-11T11:48:17Z","publisher":"Cambridge University Press","abstract":[{"text":"Fluid flows in nature and applications are frequently subject to periodic velocity modulations. Surprisingly, even for the generic case of flow through a straight pipe, there is little consensus regarding the influence of pulsation on the transition threshold to turbulence: while most studies predict a monotonically increasing threshold with pulsation frequency (i.e. Womersley number, ), others observe a decreasing threshold for identical parameters and only observe an increasing threshold at low . In the present study we apply recent advances in the understanding of transition in steady shear flows to pulsating pipe flow. For moderate pulsation amplitudes we find that the first instability encountered is subcritical (i.e. requiring finite amplitude disturbances) and gives rise to localized patches of turbulence ('puffs') analogous to steady pipe flow. By monitoring the impact of pulsation on the lifetime of turbulence we map the onset of turbulence in parameter space. Transition in pulsatile flow can be separated into three regimes. At small Womersley numbers the dynamics is dominated by the decay turbulence suffers during the slower part of the cycle and hence transition is delayed significantly. As shown in this regime thresholds closely agree with estimates based on a quasi-steady flow assumption only taking puff decay rates into account. The transition point predicted in the zero limit equals to the critical point for steady pipe flow offset by the oscillation Reynolds number (i.e. the dimensionless oscillation amplitude). In the high frequency limit on the other hand, puff lifetimes are identical to those in steady pipe flow and hence the transition threshold appears to be unaffected by flow pulsation. In the intermediate frequency regime the transition threshold sharply drops (with increasing ) from the decay dominated (quasi-steady) threshold to the steady pipe flow level.","lang":"eng"}],"intvolume":"       831","type":"journal_article","_id":"745","language":[{"iso":"eng"}],"author":[{"full_name":"Xu, Duo","last_name":"Xu","first_name":"Duo","id":"3454D55E-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Warnecke, Sascha","last_name":"Warnecke","first_name":"Sascha"},{"full_name":"Song, Baofang","last_name":"Song","first_name":"Baofang"},{"id":"34BADBA6-F248-11E8-B48F-1D18A9856A87","last_name":"Ma","first_name":"Xingyu","orcid":"0000-0002-0179-9737","full_name":"Ma, Xingyu"},{"orcid":"0000-0003-2057-2754","full_name":"Hof, Björn","first_name":"Björn","last_name":"Hof","id":"3A374330-F248-11E8-B48F-1D18A9856A87"}],"page":"418 - 432","date_updated":"2023-09-27T12:28:12Z","publication":"Journal of Fluid Mechanics","article_processing_charge":"No","scopus_import":"1","date_published":"2017-11-25T00:00:00Z","publication_status":"published","month":"11","external_id":{"isi":["000412934800005"]},"quality_controlled":"1","oa_version":"Submitted Version","oa":1,"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1709.03738"}],"publist_id":"6922","ec_funded":1,"department":[{"_id":"BjHo"}],"publication_identifier":{"issn":["00221120"]}},{"file_date_updated":"2020-07-14T12:47:58Z","date_created":"2018-12-11T11:48:17Z","day":"01","year":"2017","ddc":["571"],"has_accepted_license":"1","intvolume":"         8","abstract":[{"text":"Metabotropic glutamate receptor subtype 5 (mGluR5) is crucially implicated in the pathophysiology of Fragile X Syndrome (FXS); however, its dysfunction at the sub-cellular level, and related synaptic and cognitive phenotypes are unexplored. Here, we probed the consequences of mGluR5/Homer scaffold disruption for mGluR5 cell-surface mobility, synaptic N-methyl-D-Aspartate receptor (NMDAR) function, and behavioral phenotypes in the second-generation Fmr1 knockout (KO) mouse. Using single-molecule tracking, we found that mGluR5 was significantly more mobile at synapses in hippocampal Fmr1 KO neurons, causing an increased synaptic surface co-clustering of mGluR5 and NMDAR. This correlated with a reduced amplitude of synaptic NMDAR currents, a lack of their mGluR5-Activated long-Term depression, and NMDAR/hippocampus dependent cognitive deficits. These synaptic and behavioral phenomena were reversed by knocking down Homer1a in Fmr1 KO mice. Our study provides a mechanistic link between changes of mGluR5 dynamics and pathological phenotypes of FXS, unveiling novel targets for mGluR5-based therapeutics.","lang":"eng"}],"publisher":"Nature Publishing Group","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","status":"public","title":"Altered surface mGluR5 dynamics provoke synaptic NMDAR dysfunction and cognitive defects in Fmr1 knockout mice","isi":1,"volume":8,"citation":{"ama":"Aloisi E, Le Corf K, Dupuis J, et al. Altered surface mGluR5 dynamics provoke synaptic NMDAR dysfunction and cognitive defects in Fmr1 knockout mice. <i>Nature Communications</i>. 2017;8(1). doi:<a href=\"https://doi.org/10.1038/s41467-017-01191-2\">10.1038/s41467-017-01191-2</a>","mla":"Aloisi, Elisabetta, et al. “Altered Surface MGluR5 Dynamics Provoke Synaptic NMDAR Dysfunction and Cognitive Defects in Fmr1 Knockout Mice.” <i>Nature Communications</i>, vol. 8, no. 1, 1103, Nature Publishing Group, 2017, doi:<a href=\"https://doi.org/10.1038/s41467-017-01191-2\">10.1038/s41467-017-01191-2</a>.","apa":"Aloisi, E., Le Corf, K., Dupuis, J., Zhang, P., Ginger, M., Labrousse, V., … Frick, A. (2017). Altered surface mGluR5 dynamics provoke synaptic NMDAR dysfunction and cognitive defects in Fmr1 knockout mice. <i>Nature Communications</i>. Nature Publishing Group. <a href=\"https://doi.org/10.1038/s41467-017-01191-2\">https://doi.org/10.1038/s41467-017-01191-2</a>","chicago":"Aloisi, Elisabetta, Katy Le Corf, Julien Dupuis, Pei Zhang, Melanie Ginger, Virginie Labrousse, Michela Spatuzza, et al. “Altered Surface MGluR5 Dynamics Provoke Synaptic NMDAR Dysfunction and Cognitive Defects in Fmr1 Knockout Mice.” <i>Nature Communications</i>. Nature Publishing Group, 2017. <a href=\"https://doi.org/10.1038/s41467-017-01191-2\">https://doi.org/10.1038/s41467-017-01191-2</a>.","ieee":"E. Aloisi <i>et al.</i>, “Altered surface mGluR5 dynamics provoke synaptic NMDAR dysfunction and cognitive defects in Fmr1 knockout mice,” <i>Nature Communications</i>, vol. 8, no. 1. Nature Publishing Group, 2017.","ista":"Aloisi E, Le Corf K, Dupuis J, Zhang P, Ginger M, Labrousse V, Spatuzza M, Georg Haberl M, Costa L, Shigemoto R, Tappe Theodor A, Drago F, Vincenzo Piazza P, Mulle C, Groc L, Ciranna L, Catania M, Frick A. 2017. Altered surface mGluR5 dynamics provoke synaptic NMDAR dysfunction and cognitive defects in Fmr1 knockout mice. Nature Communications. 8(1), 1103.","short":"E. Aloisi, K. Le Corf, J. Dupuis, P. Zhang, M. Ginger, V. Labrousse, M. Spatuzza, M. Georg Haberl, L. Costa, R. Shigemoto, A. Tappe Theodor, F. Drago, P. Vincenzo Piazza, C. Mulle, L. Groc, L. Ciranna, M. Catania, A. Frick, Nature Communications 8 (2017)."},"doi":"10.1038/s41467-017-01191-2","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"article_number":"1103","issue":"1","publist_id":"6921","file":[{"access_level":"open_access","file_size":1841650,"file_id":"5287","checksum":"99ceee57549dc0461e3adfc037ec70a9","content_type":"application/pdf","date_created":"2018-12-12T10:17:32Z","file_name":"IST-2017-915-v1+1_s41467-017-01191-2.pdf","relation":"main_file","date_updated":"2020-07-14T12:47:58Z","creator":"system"}],"quality_controlled":"1","oa_version":"Published Version","oa":1,"publication_identifier":{"issn":["20411723"]},"department":[{"_id":"RySh"}],"language":[{"iso":"eng"}],"author":[{"full_name":"Aloisi, Elisabetta","first_name":"Elisabetta","last_name":"Aloisi"},{"full_name":"Le Corf, Katy","first_name":"Katy","last_name":"Le Corf"},{"full_name":"Dupuis, Julien","last_name":"Dupuis","first_name":"Julien"},{"full_name":"Zhang, Pei","last_name":"Zhang","first_name":"Pei"},{"last_name":"Ginger","first_name":"Melanie","full_name":"Ginger, Melanie"},{"first_name":"Virginie","last_name":"Labrousse","full_name":"Labrousse, Virginie"},{"full_name":"Spatuzza, Michela","first_name":"Michela","last_name":"Spatuzza"},{"first_name":"Matthias","last_name":"Georg Haberl","full_name":"Georg Haberl, Matthias"},{"first_name":"Lara","last_name":"Costa","full_name":"Costa, Lara"},{"first_name":"Ryuichi","last_name":"Shigemoto","id":"499F3ABC-F248-11E8-B48F-1D18A9856A87","full_name":"Shigemoto, Ryuichi","orcid":"0000-0001-8761-9444"},{"first_name":"Anke","last_name":"Tappe Theodor","full_name":"Tappe Theodor, Anke"},{"last_name":"Drago","first_name":"Fillippo","full_name":"Drago, Fillippo"},{"first_name":"Pier","last_name":"Vincenzo Piazza","full_name":"Vincenzo Piazza, Pier"},{"full_name":"Mulle, Christophe","last_name":"Mulle","first_name":"Christophe"},{"first_name":"Laurent","last_name":"Groc","full_name":"Groc, Laurent"},{"first_name":"Lucia","last_name":"Ciranna","full_name":"Ciranna, Lucia"},{"first_name":"Maria","last_name":"Catania","full_name":"Catania, Maria"},{"full_name":"Frick, Andreas","last_name":"Frick","first_name":"Andreas"}],"_id":"746","type":"journal_article","external_id":{"isi":["000413571300004"]},"month":"12","pubrep_id":"915","article_processing_charge":"No","publication":"Nature Communications","publication_status":"published","date_published":"2017-12-01T00:00:00Z","scopus_import":"1","date_updated":"2023-09-27T12:27:30Z"},{"day":"04","year":"2017","article_type":"original","date_created":"2018-12-11T11:48:17Z","publisher":"Elsevier","abstract":[{"lang":"eng","text":"Bradykinin (BK), a component of the kallikrein-kininogen-kinin system exerts multiple effects via B1 and B2 receptor activation. In the cardiovascular system, bradykinin has cardioprotective and vasodilator properties. We investigated the effect of BK on cardiac-projecting neurons of nucleus ambiguus, a key site for the parasympathetic cardiac regulation. BK produced a dose-dependent increase in cytosolic Ca2+ concentration. Pretreatment with HOE140, a B2 receptor antagonist, but not with R715, a B1 receptor antagonist, abolished the response to BK. A selective B2 receptor agonist, but not a B1 receptor agonist, elicited an increase in cytosolic Ca2+ similarly to BK. Inhibition of N-type voltage-gated Ca2+ channels with ω-conotoxin GVIA had no effect on the Ca2+ signal produced by BK, while pretreatment with ω-conotoxin MVIIC, a blocker of P/Q-type of Ca2+ channels, significantly diminished the effect of BK. Pretreatment with xestospongin C and 2-aminoethoxydiphenyl borate, antagonists of inositol 1,4,5-trisphosphate receptors, abolished the response to BK. Inhibition of ryanodine receptors reduced the BK-induced Ca2+ increase, while disruption of lysosomal Ca2+ stores with bafilomycin A1 did not affect the response. BK produced a dose-dependent depolarization of nucleus ambiguus neurons, which was prevented by the B2 receptor antagonist. In vivo studies indicate that microinjection of BK into nucleus ambiguus elicited bradycardia in conscious rats via B2 receptors. In summary, in cardiac vagal neurons of nucleus ambiguus, BK activates B2 receptors promoting Ca2+ influx and Ca2+ release from endoplasmic reticulum, and membrane depolarization; these effects are translated in vivo by bradycardia."}],"intvolume":"       365","isi":1,"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","status":"public","title":"Modulation of cardiac vagal tone by bradykinin acting on nucleus ambiguus","doi":"10.1016/j.neuroscience.2017.09.034","citation":{"mla":"Brǎiloiu, Eugen, et al. “Modulation of Cardiac Vagal Tone by Bradykinin Acting on Nucleus Ambiguus.” <i>Neuroscience</i>, vol. 365, Elsevier, 2017, pp. 23–32, doi:<a href=\"https://doi.org/10.1016/j.neuroscience.2017.09.034\">10.1016/j.neuroscience.2017.09.034</a>.","ama":"Brǎiloiu E, Mcguire M, Shuler S, et al. Modulation of cardiac vagal tone by bradykinin acting on nucleus ambiguus. <i>Neuroscience</i>. 2017;365:23-32. doi:<a href=\"https://doi.org/10.1016/j.neuroscience.2017.09.034\">10.1016/j.neuroscience.2017.09.034</a>","short":"E. Brǎiloiu, M. Mcguire, S. Shuler, E. Deliu, J. Barr, M. Abood, G. Brailoiu, Neuroscience 365 (2017) 23–32.","ista":"Brǎiloiu E, Mcguire M, Shuler S, Deliu E, Barr J, Abood M, Brailoiu G. 2017. Modulation of cardiac vagal tone by bradykinin acting on nucleus ambiguus. Neuroscience. 365, 23–32.","chicago":"Brǎiloiu, Eugen, Matthew Mcguire, Shadaria Shuler, Elena Deliu, Jeffrey Barr, Mary Abood, and Gabriela Brailoiu. “Modulation of Cardiac Vagal Tone by Bradykinin Acting on Nucleus Ambiguus.” <i>Neuroscience</i>. Elsevier, 2017. <a href=\"https://doi.org/10.1016/j.neuroscience.2017.09.034\">https://doi.org/10.1016/j.neuroscience.2017.09.034</a>.","ieee":"E. Brǎiloiu <i>et al.</i>, “Modulation of cardiac vagal tone by bradykinin acting on nucleus ambiguus,” <i>Neuroscience</i>, vol. 365. Elsevier, pp. 23–32, 2017.","apa":"Brǎiloiu, E., Mcguire, M., Shuler, S., Deliu, E., Barr, J., Abood, M., &#38; Brailoiu, G. (2017). Modulation of cardiac vagal tone by bradykinin acting on nucleus ambiguus. <i>Neuroscience</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.neuroscience.2017.09.034\">https://doi.org/10.1016/j.neuroscience.2017.09.034</a>"},"volume":365,"quality_controlled":"1","oa_version":"Submitted Version","oa":1,"main_file_link":[{"url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5798458","open_access":"1"}],"pmid":1,"publist_id":"6911","department":[{"_id":"GaNo"}],"publication_identifier":{"issn":["03064522"]},"type":"journal_article","_id":"747","language":[{"iso":"eng"}],"author":[{"full_name":"Brǎiloiu, Eugen","first_name":"Eugen","last_name":"Brǎiloiu"},{"full_name":"Mcguire, Matthew","first_name":"Matthew","last_name":"Mcguire"},{"full_name":"Shuler, Shadaria","first_name":"Shadaria","last_name":"Shuler"},{"id":"37A40D7E-F248-11E8-B48F-1D18A9856A87","last_name":"Deliu","first_name":"Elena","orcid":"0000-0002-7370-5293","full_name":"Deliu, Elena"},{"full_name":"Barr, Jeffrey","last_name":"Barr","first_name":"Jeffrey"},{"last_name":"Abood","first_name":"Mary","full_name":"Abood, Mary"},{"first_name":"Gabriela","last_name":"Brailoiu","full_name":"Brailoiu, Gabriela"}],"page":"23 - 32","date_updated":"2023-09-27T12:26:59Z","article_processing_charge":"No","publication":"Neuroscience","date_published":"2017-12-04T00:00:00Z","publication_status":"published","scopus_import":"1","month":"12","external_id":{"pmid":["28951324"],"isi":["000415966200003"]}},{"publisher":"Peter Lang GmbH","extern":1,"abstract":[{"lang":"eng","text":"The essay focuses on individual and collective forms of liminality in John Marlyn’s Under the Ribs of Death. Set in early twentieth-century Winnipeg, the 1957 immigrant novel explores liminal experiences related to ethnic identity, male sexuality, social class, urban spaces and turbulent economic times. As the son of a poor working-class family from Hungary, Sandor Hunyadi makes every effort to become a true Canadian and a successful businessman, but, no matter how hard he tries to overcome contemporary ethnic prejudices and economic hardships, his personal and professional life remains in liminality. In other words, the protagonist undergoes separation, fails at incorporation, and becomes stuck in transition."}],"year":"2017","editor":[{"full_name":"Brandt, Stefan L.","first_name":"Stefan","last_name":"Brandt"}],"quality_controlled":0,"day":"01","date_created":"2018-12-11T11:48:18Z","publist_id":"6909","date_published":"2017-12-01T00:00:00Z","publication_status":"published","publication":"In-Between - Liminal Spaces in Canadian Literature and Culture","doi":"10.3726/b11899","page":"91 - 100","date_updated":"2021-01-12T08:13:49Z","alternative_title":["Canadiana"],"month":"12","citation":{"chicago":"Wenzl, Bernhard. “‘...Beyond the Invisible Barrier at Portage and Main’: Liminality in John Marlyn’s Under the Ribs of Death.” In <i>In-Between - Liminal Spaces in Canadian Literature and Culture</i>, edited by Stefan Brandt, 91–100. Peter Lang GmbH, 2017. <a href=\"https://doi.org/10.3726/b11899\">https://doi.org/10.3726/b11899</a>.","ieee":"B. Wenzl, “‘...beyond the invisible barrier at Portage and Main’: Liminality in John Marlyn’s Under the Ribs of Death,” in <i>In-Between - Liminal Spaces in Canadian Literature and Culture</i>, S. Brandt, Ed. Peter Lang GmbH, 2017, pp. 91–100.","apa":"Wenzl, B. (2017). “...beyond the invisible barrier at Portage and Main”: Liminality in John Marlyn’s Under the Ribs of Death. In S. Brandt (Ed.), <i>In-Between - Liminal Spaces in Canadian Literature and Culture</i> (pp. 91–100). Peter Lang GmbH. <a href=\"https://doi.org/10.3726/b11899\">https://doi.org/10.3726/b11899</a>","short":"B. Wenzl, in:, S. Brandt (Ed.), In-Between - Liminal Spaces in Canadian Literature and Culture, Peter Lang GmbH, 2017, pp. 91–100.","ista":"Wenzl B. 2017.‘...beyond the invisible barrier at Portage and Main’: Liminality in John Marlyn’s Under the Ribs of Death. In: In-Between - Liminal Spaces in Canadian Literature and Culture. Canadiana, , 91–100.","ama":"Wenzl B. “...beyond the invisible barrier at Portage and Main”: Liminality in John Marlyn’s Under the Ribs of Death. In: Brandt S, ed. <i>In-Between - Liminal Spaces in Canadian Literature and Culture</i>. Peter Lang GmbH; 2017:91-100. doi:<a href=\"https://doi.org/10.3726/b11899\">10.3726/b11899</a>","mla":"Wenzl, Bernhard. “‘...Beyond the Invisible Barrier at Portage and Main’: Liminality in John Marlyn’s Under the Ribs of Death.” <i>In-Between - Liminal Spaces in Canadian Literature and Culture</i>, edited by Stefan Brandt, Peter Lang GmbH, 2017, pp. 91–100, doi:<a href=\"https://doi.org/10.3726/b11899\">10.3726/b11899</a>."},"_id":"748","type":"book_chapter","title":"'...beyond the invisible barrier at Portage and Main': Liminality in John Marlyn's Under the Ribs of Death","author":[{"first_name":"Bernhard","last_name":"Wenzl","id":"479E9046-F248-11E8-B48F-1D18A9856A87","full_name":"Bernhard Wenzl"}],"status":"public"},{"author":[{"last_name":"Chen","first_name":"Chong","id":"3DFD581A-F248-11E8-B48F-1D18A9856A87","full_name":"Chen, Chong"},{"last_name":"Satterfield","first_name":"Rachel","full_name":"Satterfield, Rachel"},{"full_name":"Young, Samuel","first_name":"Samuel","last_name":"Young"},{"id":"353C1B58-F248-11E8-B48F-1D18A9856A87","first_name":"Peter M","last_name":"Jonas","orcid":"0000-0001-5001-4804","full_name":"Jonas, Peter M"}],"language":[{"iso":"eng"}],"_id":"749","type":"journal_article","external_id":{"isi":["000416216700007"]},"month":"11","pubrep_id":"874","article_processing_charge":"No","publication":"Cell Reports","date_published":"2017-11-21T00:00:00Z","scopus_import":"1","publication_status":"published","page":"2082 - 2089","date_updated":"2023-09-27T12:26:04Z","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"related_material":{"record":[{"relation":"dissertation_contains","id":"324","status":"public"}]},"issue":"8","publist_id":"6907","file":[{"creator":"system","date_updated":"2020-07-14T12:47:59Z","relation":"main_file","file_name":"IST-2017-874-v1+1_PIIS2211124717316029.pdf","date_created":"2018-12-12T10:09:14Z","content_type":"application/pdf","checksum":"a6afa3764909bf6edafa07982d8e1cee","file_size":2759195,"file_id":"4737","access_level":"open_access"}],"acknowledged_ssus":[{"_id":"PreCl"}],"oa_version":"Published Version","oa":1,"quality_controlled":"1","publication_identifier":{"issn":["22111247"]},"department":[{"_id":"PeJo"}],"ec_funded":1,"status":"public","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","title":"Triple function of Synaptotagmin 7 ensures efficiency of high-frequency transmission at central GABAergic synapses","isi":1,"volume":21,"citation":{"mla":"Chen, Chong, et al. “Triple Function of Synaptotagmin 7 Ensures Efficiency of High-Frequency Transmission at Central GABAergic Synapses.” <i>Cell Reports</i>, vol. 21, no. 8, Cell Press, 2017, pp. 2082–89, doi:<a href=\"https://doi.org/10.1016/j.celrep.2017.10.122\">10.1016/j.celrep.2017.10.122</a>.","ama":"Chen C, Satterfield R, Young S, Jonas PM. Triple function of Synaptotagmin 7 ensures efficiency of high-frequency transmission at central GABAergic synapses. <i>Cell Reports</i>. 2017;21(8):2082-2089. doi:<a href=\"https://doi.org/10.1016/j.celrep.2017.10.122\">10.1016/j.celrep.2017.10.122</a>","ista":"Chen C, Satterfield R, Young S, Jonas PM. 2017. Triple function of Synaptotagmin 7 ensures efficiency of high-frequency transmission at central GABAergic synapses. Cell Reports. 21(8), 2082–2089.","short":"C. Chen, R. Satterfield, S. Young, P.M. Jonas, Cell Reports 21 (2017) 2082–2089.","ieee":"C. Chen, R. Satterfield, S. Young, and P. M. Jonas, “Triple function of Synaptotagmin 7 ensures efficiency of high-frequency transmission at central GABAergic synapses,” <i>Cell Reports</i>, vol. 21, no. 8. Cell Press, pp. 2082–2089, 2017.","chicago":"Chen, Chong, Rachel Satterfield, Samuel Young, and Peter M Jonas. “Triple Function of Synaptotagmin 7 Ensures Efficiency of High-Frequency Transmission at Central GABAergic Synapses.” <i>Cell Reports</i>. Cell Press, 2017. <a href=\"https://doi.org/10.1016/j.celrep.2017.10.122\">https://doi.org/10.1016/j.celrep.2017.10.122</a>.","apa":"Chen, C., Satterfield, R., Young, S., &#38; Jonas, P. M. (2017). Triple function of Synaptotagmin 7 ensures efficiency of high-frequency transmission at central GABAergic synapses. <i>Cell Reports</i>. Cell Press. <a href=\"https://doi.org/10.1016/j.celrep.2017.10.122\">https://doi.org/10.1016/j.celrep.2017.10.122</a>"},"doi":"10.1016/j.celrep.2017.10.122","file_date_updated":"2020-07-14T12:47:59Z","date_created":"2018-12-11T11:48:18Z","project":[{"_id":"25C26B1E-B435-11E9-9278-68D0E5697425","name":"Mechanisms of transmitter release at GABAergic synapses","call_identifier":"FWF","grant_number":"P24909-B24"},{"grant_number":"692692","call_identifier":"H2020","_id":"25B7EB9E-B435-11E9-9278-68D0E5697425","name":"Biophysics and circuit function of a giant cortical glumatergic synapse"}],"day":"21","year":"2017","has_accepted_license":"1","ddc":["570","571"],"abstract":[{"lang":"eng","text":"Synaptotagmin 7 (Syt7) is thought to be a Ca2+ sensor that mediates asynchronous transmitter release and facilitation at synapses. However, Syt7 is strongly expressed in fast-spiking, parvalbumin-expressing GABAergic interneurons, and the output synapses of these neurons produce only minimal asynchronous release and show depression rather than facilitation. To resolve this apparent contradiction, we examined the effects of genetic elimination of Syt7 on synaptic transmission at the GABAergic basket cell (BC)-Purkinje cell (PC) synapse in cerebellum. Our results indicate that at the BC-PC synapse, Syt7 contributes to asynchronous release, pool replenishment, and facilitation. In combination, these three effects ensure efficient transmitter release during high-frequency activity and guarantee frequency independence of inhibition. Our results identify a distinct function of Syt7: ensuring the efficiency of high-frequency inhibitory synaptic transmission"}],"intvolume":"        21","publisher":"Cell Press"},{"scopus_import":1,"publication_status":"published","date_published":"2017-12-01T00:00:00Z","publication":"2017 IEEE International Conference on Big Data","doi":"10.1109/BigData.2017.8258375","date_updated":"2021-01-12T08:13:55Z","page":"3760 - 3763","month":"12","citation":{"ama":"Pielorz J, Prandtstetter M, Straub M, Lampert C. Optimal geospatial volunteer allocation needs realistic distances. In: <i>2017 IEEE International Conference on Big Data</i>. IEEE; 2017:3760-3763. doi:<a href=\"https://doi.org/10.1109/BigData.2017.8258375\">10.1109/BigData.2017.8258375</a>","mla":"Pielorz, Jasmin, et al. “Optimal Geospatial Volunteer Allocation Needs Realistic Distances.” <i>2017 IEEE International Conference on Big Data</i>, IEEE, 2017, pp. 3760–63, doi:<a href=\"https://doi.org/10.1109/BigData.2017.8258375\">10.1109/BigData.2017.8258375</a>.","apa":"Pielorz, J., Prandtstetter, M., Straub, M., &#38; Lampert, C. (2017). Optimal geospatial volunteer allocation needs realistic distances. In <i>2017 IEEE International Conference on Big Data</i> (pp. 3760–3763). Boston, MA, United States: IEEE. <a href=\"https://doi.org/10.1109/BigData.2017.8258375\">https://doi.org/10.1109/BigData.2017.8258375</a>","ieee":"J. Pielorz, M. Prandtstetter, M. Straub, and C. Lampert, “Optimal geospatial volunteer allocation needs realistic distances,” in <i>2017 IEEE International Conference on Big Data</i>, Boston, MA, United States, 2017, pp. 3760–3763.","chicago":"Pielorz, Jasmin, Matthias Prandtstetter, Markus Straub, and Christoph Lampert. “Optimal Geospatial Volunteer Allocation Needs Realistic Distances.” In <i>2017 IEEE International Conference on Big Data</i>, 3760–63. IEEE, 2017. <a href=\"https://doi.org/10.1109/BigData.2017.8258375\">https://doi.org/10.1109/BigData.2017.8258375</a>.","short":"J. Pielorz, M. Prandtstetter, M. Straub, C. Lampert, in:, 2017 IEEE International Conference on Big Data, IEEE, 2017, pp. 3760–3763.","ista":"Pielorz J, Prandtstetter M, Straub M, Lampert C. 2017. Optimal geospatial volunteer allocation needs realistic distances. 2017 IEEE International Conference on Big Data. Big Data, 3760–3763."},"_id":"750","type":"conference","title":"Optimal geospatial volunteer allocation needs realistic distances","status":"public","language":[{"iso":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"full_name":"Pielorz, Jasmin","id":"49BC895A-F248-11E8-B48F-1D18A9856A87","last_name":"Pielorz","first_name":"Jasmin"},{"first_name":"Matthias","last_name":"Prandtstetter","full_name":"Prandtstetter, Matthias"},{"first_name":"Markus","last_name":"Straub","full_name":"Straub, Markus"},{"full_name":"Lampert, Christoph","orcid":"0000-0001-8622-7887","first_name":"Christoph","last_name":"Lampert","id":"40C20FD2-F248-11E8-B48F-1D18A9856A87"}],"publisher":"IEEE","department":[{"_id":"ChLa"}],"publication_identifier":{"isbn":["978-153862714-3"]},"abstract":[{"text":"Modern communication technologies allow first responders to contact thousands of potential volunteers simultaneously for support during a crisis or disaster event. However, such volunteer efforts must be well coordinated and monitored, in order to offer an effective relief to the professionals. In this paper we extend earlier work on optimally assigning volunteers to selected landmark locations. In particular, we emphasize the aspect that obtaining good assignments requires not only advanced computational tools, but also a realistic measure of distance between volunteers and landmarks. Specifically, we propose the use of the Open Street Map (OSM) driving distance instead of he previously used flight distance. We find the OSM driving distance to be better aligned with the interests of volunteers and first responders. Furthermore, we show that relying on the flying distance leads to a substantial underestimation of the number of required volunteers, causing negative side effects in case of an actual crisis situation.","lang":"eng"}],"conference":{"location":"Boston, MA, United States","start_date":"2017-12-11","name":"Big Data","end_date":"2017-12-14"},"year":"2017","quality_controlled":"1","oa_version":"None","day":"01","date_created":"2018-12-11T11:48:18Z","publist_id":"6906"}]