[{"file":[{"file_id":"5700","file_size":1924101,"date_created":"2018-12-17T12:30:14Z","creator":"dernst","date_updated":"2020-07-14T12:46:26Z","relation":"main_file","checksum":"1fcf7223fb8f99559cfa80bd6f24ce44","file_name":"2018_PNAS_Salanenka.pdf","content_type":"application/pdf","access_level":"open_access"}],"department":[{"_id":"JiFr"}],"month":"04","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","citation":{"short":"Y. Salanenka, I. Verstraeten, C. Löfke, K. Tabata, S. Naramoto, M. Glanc, J. Friml, PNAS 115 (2018) 3716–3721.","ieee":"Y. Salanenka <i>et al.</i>, “Gibberellin DELLA signaling targets the retromer complex to redirect protein trafficking to the plasma membrane,” <i>PNAS</i>, vol. 115, no. 14. National Academy of Sciences, pp. 3716–3721, 2018.","ama":"Salanenka Y, Verstraeten I, Löfke C, et al. Gibberellin DELLA signaling targets the retromer complex to redirect protein trafficking to the plasma membrane. <i>PNAS</i>. 2018;115(14):3716-3721. doi:<a href=\"https://doi.org/10.1073/pnas.1721760115\">10.1073/pnas.1721760115</a>","mla":"Salanenka, Yuliya, et al. “Gibberellin DELLA Signaling Targets the Retromer Complex to Redirect Protein Trafficking to the Plasma Membrane.” <i>PNAS</i>, vol. 115, no. 14, National Academy of Sciences, 2018, pp. 3716–21, doi:<a href=\"https://doi.org/10.1073/pnas.1721760115\">10.1073/pnas.1721760115</a>.","apa":"Salanenka, Y., Verstraeten, I., Löfke, C., Tabata, K., Naramoto, S., Glanc, M., &#38; Friml, J. (2018). Gibberellin DELLA signaling targets the retromer complex to redirect protein trafficking to the plasma membrane. <i>PNAS</i>. National Academy of Sciences. <a href=\"https://doi.org/10.1073/pnas.1721760115\">https://doi.org/10.1073/pnas.1721760115</a>","chicago":"Salanenka, Yuliya, Inge Verstraeten, Christian Löfke, Kaori Tabata, Satoshi Naramoto, Matous Glanc, and Jiří Friml. “Gibberellin DELLA Signaling Targets the Retromer Complex to Redirect Protein Trafficking to the Plasma Membrane.” <i>PNAS</i>. National Academy of Sciences, 2018. <a href=\"https://doi.org/10.1073/pnas.1721760115\">https://doi.org/10.1073/pnas.1721760115</a>.","ista":"Salanenka Y, Verstraeten I, Löfke C, Tabata K, Naramoto S, Glanc M, Friml J. 2018. Gibberellin DELLA signaling targets the retromer complex to redirect protein trafficking to the plasma membrane. PNAS. 115(14), 3716–3721."},"issue":"14","language":[{"iso":"eng"}],"oa":1,"date_created":"2018-12-11T11:46:25Z","volume":115,"oa_version":"Published Version","title":"Gibberellin DELLA signaling targets the retromer complex to redirect protein trafficking to the plasma membrane","scopus_import":"1","day":"03","author":[{"first_name":"Yuliya","last_name":"Salanenka","full_name":"Salanenka, Yuliya","id":"46DAAE7E-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Verstraeten","full_name":"Verstraeten, Inge","id":"362BF7FE-F248-11E8-B48F-1D18A9856A87","first_name":"Inge","orcid":"0000-0001-7241-2328"},{"first_name":"Christian","full_name":"Löfke, Christian","last_name":"Löfke"},{"id":"7DAAEDA4-02D0-11E9-B11A-A5A4D7DFFFD0","full_name":"Tabata, Kaori","last_name":"Tabata","first_name":"Kaori"},{"full_name":"Naramoto, Satoshi","last_name":"Naramoto","first_name":"Satoshi"},{"first_name":"Matous","orcid":"0000-0003-0619-7783","id":"1AE1EA24-02D0-11E9-9BAA-DAF4881429F2","full_name":"Glanc, Matous","last_name":"Glanc"},{"orcid":"0000-0002-8302-7596","first_name":"Jirí","last_name":"Friml","full_name":"Friml, Jirí","id":"4159519E-F248-11E8-B48F-1D18A9856A87"}],"file_date_updated":"2020-07-14T12:46:26Z","publication_status":"published","abstract":[{"lang":"eng","text":"The plant hormone gibberellic acid (GA) is a crucial regulator of growth and development. The main paradigm of GA signaling puts forward transcriptional regulation via the degradation of DELLA transcriptional repressors. GA has also been shown to regulate tropic responses by modulation of the plasma membrane incidence of PIN auxin transporters by an unclear mechanism. Here we uncovered the cellular and molecular mechanisms by which GA redirects protein trafficking and thus regulates cell surface functionality. Photoconvertible reporters revealed that GA balances the protein traffic between the vacuole degradation route and recycling back to the cell surface. Low GA levels promote vacuolar delivery and degradation of multiple cargos, including PIN proteins, whereas high GA levels promote their recycling to the plasma membrane. This GA effect requires components of the retromer complex, such as Sorting Nexin 1 (SNX1) and its interacting, microtubule (MT)-associated protein, the Cytoplasmic Linker-Associated Protein (CLASP1). Accordingly, GA regulates the subcellular distribution of SNX1 and CLASP1, and the intact MT cytoskeleton is essential for the GA effect on trafficking. This GA cellular action occurs through DELLA proteins that regulate the MT and retromer presumably via their interaction partners Prefoldins (PFDs). Our study identified a branching of the GA signaling pathway at the level of DELLA proteins, which, in parallel to regulating transcription, also target by a nontranscriptional mechanism the retromer complex acting at the intersection of the degradation and recycling trafficking routes. By this mechanism, GA can redirect receptors and transporters to the cell surface, thus coregulating multiple processes, including PIN-dependent auxin fluxes during tropic responses."}],"tmp":{"image":"/images/cc_by_nc_nd.png","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","short":"CC BY-NC-ND (4.0)"},"intvolume":"       115","has_accepted_license":"1","publist_id":"7395","external_id":{"isi":["000429012500073"]},"year":"2018","isi":1,"date_published":"2018-04-03T00:00:00Z","acknowledgement":"We gratefully acknowledge M. Blázquez (Instituto de Biología Molecular y Celular de Plantas), M. Fendrych, C. Cuesta Moliner (Institute of Science and Technology Austria), M. Vanstraelen, M. Nowack (Center for Plant Systems Biology, Ghent), C. Luschnig (Universitat fur Bodenkultur Wien, Vienna), S. Simon (Central European Institute of Technology, Brno), C. Sommerville (Carnegie Institution for Science), and Y. Gu (Penn State University) for making available the materials used in this study;\r\n...funding from the European Research Council (ERC) under the European Union’s Seventh Framework Programme (FP7/2007-2013)/ERC Grant Agreement 282300.\r\nCC BY NC ND","ec_funded":1,"status":"public","publication":"PNAS","project":[{"_id":"25716A02-B435-11E9-9278-68D0E5697425","grant_number":"282300","name":"Polarity and subcellular dynamics in plants","call_identifier":"FP7"}],"type":"journal_article","_id":"428","date_updated":"2025-05-07T11:12:27Z","publisher":"National Academy of Sciences","article_processing_charge":"No","doi":"10.1073/pnas.1721760115","quality_controlled":"1","ddc":["580"],"page":" 3716 - 3721"},{"external_id":{"isi":["000447491300057"]},"year":"2018","isi":1,"publist_id":"8011","project":[{"_id":"260C2330-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","name":"ISTplus - Postdoctoral Fellowships","grant_number":"754411"}],"publication":"PNAS","status":"public","date_published":"2018-10-02T00:00:00Z","acknowledgement":"J.R. and J.V.A. were also supported by the Academy of Finland Grants 1273253 and 267541.","ec_funded":1,"publisher":"National Academy of Sciences","doi":"10.1073/pnas.1721061115","article_processing_charge":"No","type":"journal_article","date_updated":"2023-09-13T08:57:38Z","_id":"43","ddc":["570","577"],"page":"10690 - 10695","quality_controlled":"1","month":"10","file":[{"file_size":4070777,"date_created":"2019-04-09T08:02:50Z","date_updated":"2020-07-14T12:46:26Z","creator":"dernst","file_id":"6258","file_name":"2018_PNAS_Rybicki.pdf","content_type":"application/pdf","access_level":"open_access","relation":"main_file","checksum":"df7ac544a587c06b75692653b9fabd18"}],"department":[{"_id":"DaAl"}],"language":[{"iso":"eng"}],"pubrep_id":"1063","oa":1,"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","issue":"42","citation":{"ama":"Rybicki J, Kisdi E, Anttila J. Model of bacterial toxin-dependent pathogenesis explains infective dose. <i>PNAS</i>. 2018;115(42):10690-10695. doi:<a href=\"https://doi.org/10.1073/pnas.1721061115\">10.1073/pnas.1721061115</a>","ieee":"J. Rybicki, E. Kisdi, and J. Anttila, “Model of bacterial toxin-dependent pathogenesis explains infective dose,” <i>PNAS</i>, vol. 115, no. 42. National Academy of Sciences, pp. 10690–10695, 2018.","short":"J. Rybicki, E. Kisdi, J. Anttila, PNAS 115 (2018) 10690–10695.","chicago":"Rybicki, Joel, Eva Kisdi, and Jani Anttila. “Model of Bacterial Toxin-Dependent Pathogenesis Explains Infective Dose.” <i>PNAS</i>. National Academy of Sciences, 2018. <a href=\"https://doi.org/10.1073/pnas.1721061115\">https://doi.org/10.1073/pnas.1721061115</a>.","ista":"Rybicki J, Kisdi E, Anttila J. 2018. Model of bacterial toxin-dependent pathogenesis explains infective dose. PNAS. 115(42), 10690–10695.","apa":"Rybicki, J., Kisdi, E., &#38; Anttila, J. (2018). Model of bacterial toxin-dependent pathogenesis explains infective dose. <i>PNAS</i>. National Academy of Sciences. <a href=\"https://doi.org/10.1073/pnas.1721061115\">https://doi.org/10.1073/pnas.1721061115</a>","mla":"Rybicki, Joel, et al. “Model of Bacterial Toxin-Dependent Pathogenesis Explains Infective Dose.” <i>PNAS</i>, vol. 115, no. 42, National Academy of Sciences, 2018, pp. 10690–95, doi:<a href=\"https://doi.org/10.1073/pnas.1721061115\">10.1073/pnas.1721061115</a>."},"oa_version":"Submitted Version","title":"Model of bacterial toxin-dependent pathogenesis explains infective dose","author":[{"last_name":"Rybicki","id":"334EFD2E-F248-11E8-B48F-1D18A9856A87","full_name":"Rybicki, Joel","orcid":"0000-0002-6432-6646","first_name":"Joel"},{"last_name":"Kisdi","full_name":"Kisdi, Eva","first_name":"Eva"},{"first_name":"Jani","full_name":"Anttila, Jani","last_name":"Anttila"}],"day":"02","scopus_import":"1","date_created":"2018-12-11T11:44:19Z","volume":115,"abstract":[{"lang":"eng","text":"The initial amount of pathogens required to start an infection within a susceptible host is called the infective dose and is known to vary to a large extent between different pathogen species. We investigate the hypothesis that the differences in infective doses are explained by the mode of action in the underlying mechanism of pathogenesis: Pathogens with locally acting mechanisms tend to have smaller infective doses than pathogens with distantly acting mechanisms. While empirical evidence tends to support the hypothesis, a formal theoretical explanation has been lacking. We give simple analytical models to gain insight into this phenomenon and also investigate a stochastic, spatially explicit, mechanistic within-host model for toxin-dependent bacterial infections. The model shows that pathogens secreting locally acting toxins have smaller infective doses than pathogens secreting diffusive toxins, as hypothesized. While local pathogenetic mechanisms require smaller infective doses, pathogens with distantly acting toxins tend to spread faster and may cause more damage to the host. The proposed model can serve as a basis for the spatially explicit analysis of various virulence factors also in the context of other problems in infection dynamics."}],"intvolume":"       115","has_accepted_license":"1","publication_status":"published","file_date_updated":"2020-07-14T12:46:26Z"},{"month":"04","department":[{"_id":"NiBa"}],"file":[{"file_name":"IST-2018-1012-v1+1_2018_Barton_Tread.pdf","content_type":"application/pdf","access_level":"open_access","relation":"main_file","checksum":"3d838dc285df394376555b794b6a5ad1","file_size":500129,"date_created":"2018-12-12T10:12:40Z","creator":"system","date_updated":"2020-07-14T12:46:26Z","file_id":"4958"}],"oa":1,"language":[{"iso":"eng"}],"pubrep_id":"1012","citation":{"apa":"Novembre, J., &#38; Barton, N. H. (2018). Tread lightly interpreting polygenic tests of selection. <i>Genetics</i>. Genetics Society of America. <a href=\"https://doi.org/10.1534/genetics.118.300786\">https://doi.org/10.1534/genetics.118.300786</a>","mla":"Novembre, John, and Nicholas H. Barton. “Tread Lightly Interpreting Polygenic Tests of Selection.” <i>Genetics</i>, vol. 208, no. 4, Genetics Society of America, 2018, pp. 1351–55, doi:<a href=\"https://doi.org/10.1534/genetics.118.300786\">10.1534/genetics.118.300786</a>.","ista":"Novembre J, Barton NH. 2018. Tread lightly interpreting polygenic tests of selection. Genetics. 208(4), 1351–1355.","chicago":"Novembre, John, and Nicholas H Barton. “Tread Lightly Interpreting Polygenic Tests of Selection.” <i>Genetics</i>. Genetics Society of America, 2018. <a href=\"https://doi.org/10.1534/genetics.118.300786\">https://doi.org/10.1534/genetics.118.300786</a>.","ieee":"J. Novembre and N. H. Barton, “Tread lightly interpreting polygenic tests of selection,” <i>Genetics</i>, vol. 208, no. 4. Genetics Society of America, pp. 1351–1355, 2018.","short":"J. Novembre, N.H. Barton, Genetics 208 (2018) 1351–1355.","ama":"Novembre J, Barton NH. Tread lightly interpreting polygenic tests of selection. <i>Genetics</i>. 2018;208(4):1351-1355. doi:<a href=\"https://doi.org/10.1534/genetics.118.300786\">10.1534/genetics.118.300786</a>"},"issue":"4","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","scopus_import":"1","day":"01","author":[{"full_name":"Novembre, John","last_name":"Novembre","first_name":"John"},{"orcid":"0000-0002-8548-5240","first_name":"Nicholas H","full_name":"Barton, Nicholas H","id":"4880FE40-F248-11E8-B48F-1D18A9856A87","last_name":"Barton"}],"oa_version":"Published Version","title":"Tread lightly interpreting polygenic tests of selection","volume":208,"date_created":"2018-12-11T11:46:26Z","has_accepted_license":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"abstract":[{"text":"In this issue of GENETICS, a new method for detecting natural selection on polygenic traits is developed and applied to sev- eral human examples ( Racimo et al. 2018 ). By de fi nition, many loci contribute to variation in polygenic traits, and a challenge for evolutionary ge neticists has been that these traits can evolve by small, nearly undetectable shifts in allele frequencies across each of many, typically unknown, loci. Recently, a helpful remedy has arisen. Genome-wide associ- ation studies (GWAS) have been illuminating sets of loci that can be interrogated jointly for c hanges in allele frequencies. By aggregating small signal s of change across many such loci, directional natural selection is now in principle detect- able using genetic data, even for highly polygenic traits. This is an exciting arena of progress – with these methods, tests can be made for selection associated with traits, and we can now study selection in what may be its most prevalent mode. The continuing fast pace of GWAS publications suggest there will be many more polygenic tests of selection in the near future, as every new GWAS is an opportunity for an accom- panying test of polygenic selection. However, it is important to be aware of complications th at arise in interpretation, especially given that these studies may easily be misinter- preted both in and outside the evolutionary genetics commu- nity. Here, we provide context for understanding polygenic tests and urge caution regarding how these results are inter- preted and reported upon more broadly.","lang":"eng"}],"intvolume":"       208","file_date_updated":"2020-07-14T12:46:26Z","publication_status":"published","year":"2018","isi":1,"external_id":{"isi":["000429094400005"]},"publist_id":"7393","publication":"Genetics","status":"public","date_published":"2018-04-01T00:00:00Z","article_processing_charge":"No","doi":"10.1534/genetics.118.300786","publisher":"Genetics Society of America","_id":"430","date_updated":"2023-09-19T10:17:30Z","type":"journal_article","page":"1351 - 1355","ddc":["576"],"quality_controlled":"1"},{"related_material":{"record":[{"id":"5857","status":"public","relation":"later_version"}]},"external_id":{"arxiv":["1708.08037"]},"year":"2018","publist_id":"7390","status":"public","conference":{"location":"Boston, MA, United States","end_date":"2017-09-27","start_date":"201-09-25","name":"GD 2017: Graph Drawing and Network Visualization"},"date_published":"2018-01-21T00:00:00Z","publisher":"Springer","alternative_title":["LNCS"],"doi":"10.1007/978-3-319-73915-1_14","type":"conference","_id":"433","date_updated":"2023-08-24T14:39:32Z","page":"160 - 166","quality_controlled":"1","main_file_link":[{"url":"https://arxiv.org/abs/1708.08037","open_access":"1"}],"month":"01","arxiv":1,"department":[{"_id":"UlWa"}],"language":[{"iso":"eng"}],"oa":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"apa":"Fulek, R., &#38; Pach, J. (2018). Thrackles: An improved upper bound (Vol. 10692, pp. 160–166). Presented at the GD 2017: Graph Drawing and Network Visualization, Boston, MA, United States: Springer. <a href=\"https://doi.org/10.1007/978-3-319-73915-1_14\">https://doi.org/10.1007/978-3-319-73915-1_14</a>","mla":"Fulek, Radoslav, and János Pach. <i>Thrackles: An Improved Upper Bound</i>. Vol. 10692, Springer, 2018, pp. 160–66, doi:<a href=\"https://doi.org/10.1007/978-3-319-73915-1_14\">10.1007/978-3-319-73915-1_14</a>.","ista":"Fulek R, Pach J. 2018. Thrackles: An improved upper bound. GD 2017: Graph Drawing and Network Visualization, LNCS, vol. 10692, 160–166.","chicago":"Fulek, Radoslav, and János Pach. “Thrackles: An Improved Upper Bound,” 10692:160–66. Springer, 2018. <a href=\"https://doi.org/10.1007/978-3-319-73915-1_14\">https://doi.org/10.1007/978-3-319-73915-1_14</a>.","ieee":"R. Fulek and J. Pach, “Thrackles: An improved upper bound,” presented at the GD 2017: Graph Drawing and Network Visualization, Boston, MA, United States, 2018, vol. 10692, pp. 160–166.","short":"R. Fulek, J. Pach, in:, Springer, 2018, pp. 160–166.","ama":"Fulek R, Pach J. Thrackles: An improved upper bound. In: Vol 10692. Springer; 2018:160-166. doi:<a href=\"https://doi.org/10.1007/978-3-319-73915-1_14\">10.1007/978-3-319-73915-1_14</a>"},"title":"Thrackles: An improved upper bound","oa_version":"Submitted Version","scopus_import":1,"day":"21","author":[{"first_name":"Radoslav","orcid":"0000-0001-8485-1774","last_name":"Fulek","id":"39F3FFE4-F248-11E8-B48F-1D18A9856A87","full_name":"Fulek, Radoslav"},{"first_name":"János","last_name":"Pach","full_name":"Pach, János"}],"date_created":"2018-12-11T11:46:27Z","volume":10692,"intvolume":"     10692","abstract":[{"text":"A thrackle is a graph drawn in the plane so that every pair of its edges meet exactly once: either at a common end vertex or in a proper crossing. We prove that any thrackle of n vertices has at most 1.3984n edges. Quasi-thrackles are defined similarly, except that every pair of edges that do not share a vertex are allowed to cross an odd number of times. It is also shown that the maximum number of edges of a quasi-thrackle on n vertices is 3/2(n-1), and that this bound is best possible for infinitely many values of n.","lang":"eng"}],"publication_status":"published"},{"volume":19,"date_created":"2018-12-11T11:46:27Z","author":[{"first_name":"Yu","full_name":"Jiang, Yu","last_name":"Jiang"},{"last_name":"Liu","full_name":"Liu, Han","first_name":"Han"},{"first_name":"Huobing","last_name":"Song","full_name":"Song, Huobing"},{"orcid":"0000-0002-3066-6941","first_name":"Hui","id":"3BDE25AA-F248-11E8-B48F-1D18A9856A87","full_name":"Kong, Hui","last_name":"Kong"},{"full_name":"Wang, Rui","last_name":"Wang","first_name":"Rui"},{"first_name":"Yong","last_name":"Guan","full_name":"Guan, Yong"},{"first_name":"Lui","last_name":"Sha","full_name":"Sha, Lui"}],"day":"01","scopus_import":"1","oa_version":"None","title":"Safety-assured model-driven design of the multifunction vehicle bus controller","publication_status":"published","intvolume":"        19","abstract":[{"lang":"eng","text":"In this paper, we present a formal model-driven design approach to establish a safety-assured implementation of multifunction vehicle bus controller (MVBC), which controls the data transmission among the devices of the vehicle. First, the generic models and safety requirements described in International Electrotechnical Commission Standard 61375 are formalized as time automata and timed computation tree logic formulas, respectively. With model checking tool Uppaal, we verify whether or not the constructed timed automata satisfy the formulas and several logic inconsistencies in the original standard are detected and corrected. Then, we apply the code generation tool Times to generate C code from the verified model, which is later synthesized into a real MVBC chip, with some handwriting glue code. Furthermore, the runtime verification tool RMOR is applied on the integrated code, to verify some safety requirements that cannot be formalized on the timed automata. For evaluation, we compare the proposed approach with existing MVBC design methods, such as BeagleBone, Galsblock, and Simulink. Experiments show that more ambiguousness or bugs in the standard are detected during Uppaal verification, and the generated code of Times outperforms the C code generated by others in terms of the synthesized binary code size. The errors in the standard have been confirmed and the resulting MVBC has been deployed in the real train communication network."}],"department":[{"_id":"ToHe"}],"month":"01","issue":"10","citation":{"ama":"Jiang Y, Liu H, Song H, et al. Safety-assured model-driven design of the multifunction vehicle bus controller. <i>IEEE Transactions on Intelligent Transportation Systems</i>. 2018;19(10):3320-3333. doi:<a href=\"https://doi.org/10.1109/TITS.2017.2778077\">10.1109/TITS.2017.2778077</a>","short":"Y. Jiang, H. Liu, H. Song, H. Kong, R. Wang, Y. Guan, L. Sha, IEEE Transactions on Intelligent Transportation Systems 19 (2018) 3320–3333.","ieee":"Y. Jiang <i>et al.</i>, “Safety-assured model-driven design of the multifunction vehicle bus controller,” <i>IEEE Transactions on Intelligent Transportation Systems</i>, vol. 19, no. 10. IEEE, pp. 3320–3333, 2018.","chicago":"Jiang, Yu, Han Liu, Huobing Song, Hui Kong, Rui Wang, Yong Guan, and Lui Sha. “Safety-Assured Model-Driven Design of the Multifunction Vehicle Bus Controller.” <i>IEEE Transactions on Intelligent Transportation Systems</i>. IEEE, 2018. <a href=\"https://doi.org/10.1109/TITS.2017.2778077\">https://doi.org/10.1109/TITS.2017.2778077</a>.","ista":"Jiang Y, Liu H, Song H, Kong H, Wang R, Guan Y, Sha L. 2018. Safety-assured model-driven design of the multifunction vehicle bus controller. IEEE Transactions on Intelligent Transportation Systems. 19(10), 3320–3333.","mla":"Jiang, Yu, et al. “Safety-Assured Model-Driven Design of the Multifunction Vehicle Bus Controller.” <i>IEEE Transactions on Intelligent Transportation Systems</i>, vol. 19, no. 10, IEEE, 2018, pp. 3320–33, doi:<a href=\"https://doi.org/10.1109/TITS.2017.2778077\">10.1109/TITS.2017.2778077</a>.","apa":"Jiang, Y., Liu, H., Song, H., Kong, H., Wang, R., Guan, Y., &#38; Sha, L. (2018). Safety-assured model-driven design of the multifunction vehicle bus controller. <i>IEEE Transactions on Intelligent Transportation Systems</i>. IEEE. <a href=\"https://doi.org/10.1109/TITS.2017.2778077\">https://doi.org/10.1109/TITS.2017.2778077</a>"},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","language":[{"iso":"eng"}],"date_updated":"2023-09-18T08:12:49Z","_id":"434","type":"journal_article","doi":"10.1109/TITS.2017.2778077","article_processing_charge":"No","publisher":"IEEE","quality_controlled":"1","page":"3320 - 3333","publist_id":"7389","isi":1,"year":"2018","external_id":{"isi":["000446651100020"]},"related_material":{"record":[{"id":"1205","relation":"earlier_version","status":"public"}]},"date_published":"2018-01-01T00:00:00Z","publication":"IEEE Transactions on Intelligent Transportation Systems","status":"public"},{"month":"02","arxiv":1,"department":[{"_id":"MiLe"}],"language":[{"iso":"eng"}],"oa":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"ama":"Midya B, Konotop V. Coherent-perfect-absorber and laser for bound states in a continuum. <i>Optics Letters</i>. 2018;43(3):607-610. doi:<a href=\"https://doi.org/10.1364/OL.43.000607\">10.1364/OL.43.000607</a>","short":"B. Midya, V. Konotop, Optics Letters 43 (2018) 607–610.","ieee":"B. Midya and V. Konotop, “Coherent-perfect-absorber and laser for bound states in a continuum,” <i>Optics Letters</i>, vol. 43, no. 3. Optica  Publishing Group, pp. 607–610, 2018.","ista":"Midya B, Konotop V. 2018. Coherent-perfect-absorber and laser for bound states in a continuum. Optics Letters. 43(3), 607–610.","chicago":"Midya, Bikashkali, and Vladimir Konotop. “Coherent-Perfect-Absorber and Laser for Bound States in a Continuum.” <i>Optics Letters</i>. Optica  Publishing Group, 2018. <a href=\"https://doi.org/10.1364/OL.43.000607\">https://doi.org/10.1364/OL.43.000607</a>.","mla":"Midya, Bikashkali, and Vladimir Konotop. “Coherent-Perfect-Absorber and Laser for Bound States in a Continuum.” <i>Optics Letters</i>, vol. 43, no. 3, Optica  Publishing Group, 2018, pp. 607–10, doi:<a href=\"https://doi.org/10.1364/OL.43.000607\">10.1364/OL.43.000607</a>.","apa":"Midya, B., &#38; Konotop, V. (2018). Coherent-perfect-absorber and laser for bound states in a continuum. <i>Optics Letters</i>. Optica  Publishing Group. <a href=\"https://doi.org/10.1364/OL.43.000607\">https://doi.org/10.1364/OL.43.000607</a>"},"issue":"3","oa_version":"Preprint","title":"Coherent-perfect-absorber and laser for bound states in a continuum","scopus_import":"1","day":"01","author":[{"last_name":"Midya","full_name":"Midya, Bikashkali","id":"456187FC-F248-11E8-B48F-1D18A9856A87","first_name":"Bikashkali"},{"last_name":"Konotop","full_name":"Konotop, Vladimir","first_name":"Vladimir"}],"date_created":"2018-12-11T11:46:27Z","volume":43,"intvolume":"        43","abstract":[{"text":"It is shown that two fundamentally different phenomena, the bound states in continuum and the spectral singularity (or time-reversed spectral singularity), can occur simultaneously. This can be achieved in a rectangular core dielectric waveguide with an embedded active (or absorbing) layer. In such a system a two-dimensional bound state in a continuum is created in the plane of a waveguide cross section, and it is emitted or absorbed along the waveguide core. The idea can be used for experimental implementation of a laser or a coherent-perfect-absorber for a photonic bound state that resides in a continuous spectrum.","lang":"eng"}],"publication_status":"published","external_id":{"isi":["000423776600066"],"arxiv":["1711.01986"]},"isi":1,"year":"2018","publist_id":"7388","status":"public","publication":"Optics Letters","project":[{"_id":"25681D80-B435-11E9-9278-68D0E5697425","grant_number":"291734","name":"International IST Postdoc Fellowship Programme","call_identifier":"FP7"}],"acknowledgement":"Seventh Framework Programme (FP7) People: Marie-Curie Actions (PEOPLE) (291734). B. M. acknowledges the financial support by the People Programme (Marie Curie Actions) of the European Union’s Seventh Framework Programme (FP7/ 2007-2013) under REA.","date_published":"2018-02-01T00:00:00Z","ec_funded":1,"publisher":"Optica  Publishing Group","article_processing_charge":"No","doi":"10.1364/OL.43.000607","type":"journal_article","_id":"435","date_updated":"2023-10-17T12:15:06Z","page":"607 - 610","quality_controlled":"1","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1711.01986"}]},{"ec_funded":1,"date_published":"2018-02-07T00:00:00Z","project":[{"_id":"257EB838-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","grant_number":"732894","name":"Hybrid Optomechanical Technologies"},{"grant_number":"707438","name":"Microwave-to-Optical Quantum Link: Quantum Teleportation and Quantum Illumination with cavity Optomechanics SUPEREOM","call_identifier":"H2020","_id":"258047B6-B435-11E9-9278-68D0E5697425"}],"publication":"Physical Review Letters","status":"public","publist_id":"7387","isi":1,"year":"2018","external_id":{"arxiv":["1706.09051"],"isi":["000424382100004"]},"related_material":{"link":[{"relation":"press_release","url":"https://ist.ac.at/en/news/interference-as-a-new-method-for-cooling-quantum-devices/","description":"News on IST Homepage"}]},"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1706.09051"}],"quality_controlled":"1","date_updated":"2023-09-13T08:52:27Z","_id":"436","type":"journal_article","doi":"10.1103/PhysRevLett.120.060601","article_processing_charge":"No","publisher":"American Physical Society","issue":"6","citation":{"chicago":"Barzanjeh, Shabir, Matteo Aquilina, and André Xuereb. “Manipulating the Flow of Thermal Noise in Quantum Devices.” <i>Physical Review Letters</i>. American Physical Society, 2018. <a href=\"https://doi.org/10.1103/PhysRevLett.120.060601\">https://doi.org/10.1103/PhysRevLett.120.060601</a>.","ista":"Barzanjeh S, Aquilina M, Xuereb A. 2018. Manipulating the flow of thermal noise in quantum devices. Physical Review Letters. 120(6), 060601.","apa":"Barzanjeh, S., Aquilina, M., &#38; Xuereb, A. (2018). Manipulating the flow of thermal noise in quantum devices. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevLett.120.060601\">https://doi.org/10.1103/PhysRevLett.120.060601</a>","mla":"Barzanjeh, Shabir, et al. “Manipulating the Flow of Thermal Noise in Quantum Devices.” <i>Physical Review Letters</i>, vol. 120, no. 6, 060601, American Physical Society, 2018, doi:<a href=\"https://doi.org/10.1103/PhysRevLett.120.060601\">10.1103/PhysRevLett.120.060601</a>.","ama":"Barzanjeh S, Aquilina M, Xuereb A. Manipulating the flow of thermal noise in quantum devices. <i>Physical Review Letters</i>. 2018;120(6). doi:<a href=\"https://doi.org/10.1103/PhysRevLett.120.060601\">10.1103/PhysRevLett.120.060601</a>","ieee":"S. Barzanjeh, M. Aquilina, and A. Xuereb, “Manipulating the flow of thermal noise in quantum devices,” <i>Physical Review Letters</i>, vol. 120, no. 6. American Physical Society, 2018.","short":"S. Barzanjeh, M. Aquilina, A. Xuereb, Physical Review Letters 120 (2018)."},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","oa":1,"language":[{"iso":"eng"}],"department":[{"_id":"JoFi"}],"article_number":"060601 ","month":"02","arxiv":1,"publication_status":"published","abstract":[{"lang":"eng","text":"There has been significant interest recently in using complex quantum systems to create effective nonreciprocal dynamics. Proposals have been put forward for the realization of artificial magnetic fields for photons and phonons; experimental progress is fast making these proposals a reality. Much work has concentrated on the use of such systems for controlling the flow of signals, e.g., to create isolators or directional amplifiers for optical signals. In this Letter, we build on this work but move in a different direction. We develop the theory of and discuss a potential realization for the controllable flow of thermal noise in quantum systems. We demonstrate theoretically that the unidirectional flow of thermal noise is possible within quantum cascaded systems. Viewing an optomechanical platform as a cascaded system we show here that one can ultimately control the direction of the flow of thermal noise. By appropriately engineering the mechanical resonator, which acts as an artificial reservoir, the flow of thermal noise can be constrained to a desired direction, yielding a thermal rectifier. The proposed quantum thermal noise rectifier could potentially be used to develop devices such as a thermal modulator, a thermal router, and a thermal amplifier for nanoelectronic devices and superconducting circuits."}],"intvolume":"       120","volume":120,"date_created":"2018-12-11T11:46:28Z","author":[{"orcid":"0000-0003-0415-1423","first_name":"Shabir","full_name":"Barzanjeh, Shabir","id":"2D25E1F6-F248-11E8-B48F-1D18A9856A87","last_name":"Barzanjeh"},{"first_name":"Matteo","full_name":"Aquilina, Matteo","last_name":"Aquilina"},{"last_name":"Xuereb","full_name":"Xuereb, André","first_name":"André"}],"scopus_import":"1","day":"07","title":"Manipulating the flow of thermal noise in quantum devices","oa_version":"Preprint"},{"publication_status":"published","file_date_updated":"2020-07-14T12:46:27Z","has_accepted_license":"1","tmp":{"name":"Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc/4.0/legalcode","image":"/images/cc_by_nc.png","short":"CC BY-NC (4.0)"},"license":"https://creativecommons.org/licenses/by-nc/4.0/","intvolume":"        48","abstract":[{"text":"Dendritic cells (DCs) are sentinels of the adaptive immune system that reside in peripheral organs of mammals. Upon pathogen encounter, they undergo maturation and up-regulate the chemokine receptor CCR7 that guides them along gradients of its chemokine ligands CCL19 and 21 to the next draining lymph node. There, DCs present peripherally acquired antigen to naïve T cells, thereby triggering adaptive immunity.","lang":"eng"}],"acknowledged_ssus":[{"_id":"SSU"}],"volume":48,"date_created":"2018-12-11T11:46:28Z","author":[{"first_name":"Alexander F","orcid":"0000-0002-1073-744X","id":"3B1B77E4-F248-11E8-B48F-1D18A9856A87","full_name":"Leithner, Alexander F","last_name":"Leithner"},{"id":"3F0587C8-F248-11E8-B48F-1D18A9856A87","full_name":"Renkawitz, Jörg","last_name":"Renkawitz","orcid":"0000-0003-2856-3369","first_name":"Jörg"},{"first_name":"Ingrid","id":"4C7D837E-F248-11E8-B48F-1D18A9856A87","full_name":"De Vries, Ingrid","last_name":"De Vries"},{"full_name":"Hauschild, Robert","id":"4E01D6B4-F248-11E8-B48F-1D18A9856A87","last_name":"Hauschild","first_name":"Robert","orcid":"0000-0001-9843-3522"},{"last_name":"Haecker","full_name":"Haecker, Hans","first_name":"Hans"},{"id":"41E9FBEA-F248-11E8-B48F-1D18A9856A87","full_name":"Sixt, Michael K","last_name":"Sixt","orcid":"0000-0002-6620-9179","first_name":"Michael K"}],"day":"13","scopus_import":"1","title":"Fast and efficient genetic engineering of hematopoietic precursor cells for the study of dendritic cell migration","oa_version":"Published Version","issue":"6","citation":{"mla":"Leithner, Alexander F., et al. “Fast and Efficient Genetic Engineering of Hematopoietic Precursor Cells for the Study of Dendritic Cell Migration.” <i>European Journal of Immunology</i>, vol. 48, no. 6, Wiley-Blackwell, 2018, pp. 1074–77, doi:<a href=\"https://doi.org/10.1002/eji.201747358\">10.1002/eji.201747358</a>.","apa":"Leithner, A. F., Renkawitz, J., de Vries, I., Hauschild, R., Haecker, H., &#38; Sixt, M. K. (2018). Fast and efficient genetic engineering of hematopoietic precursor cells for the study of dendritic cell migration. <i>European Journal of Immunology</i>. Wiley-Blackwell. <a href=\"https://doi.org/10.1002/eji.201747358\">https://doi.org/10.1002/eji.201747358</a>","ista":"Leithner AF, Renkawitz J, de Vries I, Hauschild R, Haecker H, Sixt MK. 2018. Fast and efficient genetic engineering of hematopoietic precursor cells for the study of dendritic cell migration. European Journal of Immunology. 48(6), 1074–1077.","chicago":"Leithner, Alexander F, Jörg Renkawitz, Ingrid de Vries, Robert Hauschild, Hans Haecker, and Michael K Sixt. “Fast and Efficient Genetic Engineering of Hematopoietic Precursor Cells for the Study of Dendritic Cell Migration.” <i>European Journal of Immunology</i>. Wiley-Blackwell, 2018. <a href=\"https://doi.org/10.1002/eji.201747358\">https://doi.org/10.1002/eji.201747358</a>.","short":"A.F. Leithner, J. Renkawitz, I. de Vries, R. Hauschild, H. Haecker, M.K. Sixt, European Journal of Immunology 48 (2018) 1074–1077.","ieee":"A. F. Leithner, J. Renkawitz, I. de Vries, R. Hauschild, H. Haecker, and M. K. Sixt, “Fast and efficient genetic engineering of hematopoietic precursor cells for the study of dendritic cell migration,” <i>European Journal of Immunology</i>, vol. 48, no. 6. Wiley-Blackwell, pp. 1074–1077, 2018.","ama":"Leithner AF, Renkawitz J, de Vries I, Hauschild R, Haecker H, Sixt MK. Fast and efficient genetic engineering of hematopoietic precursor cells for the study of dendritic cell migration. <i>European Journal of Immunology</i>. 2018;48(6):1074-1077. doi:<a href=\"https://doi.org/10.1002/eji.201747358\">10.1002/eji.201747358</a>"},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","oa":1,"language":[{"iso":"eng"}],"pubrep_id":"1067","department":[{"_id":"MiSi"},{"_id":"Bio"}],"file":[{"file_id":"5044","date_created":"2018-12-12T10:13:56Z","file_size":590106,"date_updated":"2020-07-14T12:46:27Z","creator":"system","relation":"main_file","checksum":"9d5b74cd016505aeb9a4c2d33bbedaeb","file_name":"IST-2018-1067-v1+2_Leithner_et_al-2018-European_Journal_of_Immunology.pdf","content_type":"application/pdf","access_level":"open_access"}],"month":"02","quality_controlled":"1","page":"1074 - 1077","ddc":["570"],"date_updated":"2023-09-11T14:01:18Z","_id":"437","type":"journal_article","doi":"10.1002/eji.201747358","article_processing_charge":"Yes (via OA deal)","publisher":"Wiley-Blackwell","ec_funded":1,"acknowledgement":"This work was supported by grants of the European Research Council (ERC CoG 724373) and the Austrian Science Fund (FWF) to M.S. We thank the scientific support units at IST Austria for excellent technical support.\r\nWe thank the  scientific  support units at IST Austria for excellent technical support.   ","date_published":"2018-02-13T00:00:00Z","project":[{"_id":"25FE9508-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","name":"Cellular navigation along spatial gradients","grant_number":"724373"}],"publication":"European Journal of Immunology","status":"public","publist_id":"7386","isi":1,"year":"2018","external_id":{"isi":["000434963700016"]}},{"issue":"6","citation":{"ama":"Nikolic N, Bergmiller T, Vandervelde A, Albanese T, Gelens L, Moll I. Autoregulation of mazEF expression underlies growth heterogeneity in bacterial populations. <i>Nucleic Acids Research</i>. 2018;46(6):2918-2931. doi:<a href=\"https://doi.org/10.1093/nar/gky079\">10.1093/nar/gky079</a>","ieee":"N. Nikolic, T. Bergmiller, A. Vandervelde, T. Albanese, L. Gelens, and I. Moll, “Autoregulation of mazEF expression underlies growth heterogeneity in bacterial populations,” <i>Nucleic Acids Research</i>, vol. 46, no. 6. Oxford University Press, pp. 2918–2931, 2018.","short":"N. Nikolic, T. Bergmiller, A. Vandervelde, T. Albanese, L. Gelens, I. Moll, Nucleic Acids Research 46 (2018) 2918–2931.","chicago":"Nikolic, Nela, Tobias Bergmiller, Alexandra Vandervelde, Tanino Albanese, Lendert Gelens, and Isabella Moll. “Autoregulation of MazEF Expression Underlies Growth Heterogeneity in Bacterial Populations.” <i>Nucleic Acids Research</i>. Oxford University Press, 2018. <a href=\"https://doi.org/10.1093/nar/gky079\">https://doi.org/10.1093/nar/gky079</a>.","ista":"Nikolic N, Bergmiller T, Vandervelde A, Albanese T, Gelens L, Moll I. 2018. Autoregulation of mazEF expression underlies growth heterogeneity in bacterial populations. Nucleic Acids Research. 46(6), 2918–2931.","apa":"Nikolic, N., Bergmiller, T., Vandervelde, A., Albanese, T., Gelens, L., &#38; Moll, I. (2018). Autoregulation of mazEF expression underlies growth heterogeneity in bacterial populations. <i>Nucleic Acids Research</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/nar/gky079\">https://doi.org/10.1093/nar/gky079</a>","mla":"Nikolic, Nela, et al. “Autoregulation of MazEF Expression Underlies Growth Heterogeneity in Bacterial Populations.” <i>Nucleic Acids Research</i>, vol. 46, no. 6, Oxford University Press, 2018, pp. 2918–31, doi:<a href=\"https://doi.org/10.1093/nar/gky079\">10.1093/nar/gky079</a>."},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","oa":1,"language":[{"iso":"eng"}],"pubrep_id":"971","department":[{"_id":"CaGu"}],"file":[{"file_name":"IST-2018-971-v1+1_2018_Nikoloc_Autoregulation_of.pdf","access_level":"open_access","content_type":"application/pdf","relation":"main_file","checksum":"3ff4f545c27e11a4cd20ccb30778793e","date_created":"2018-12-12T10:15:30Z","file_size":5027978,"creator":"system","date_updated":"2020-07-14T12:46:27Z","file_id":"5151"}],"month":"04","publication_status":"published","file_date_updated":"2020-07-14T12:46:27Z","has_accepted_license":"1","abstract":[{"lang":"eng","text":"The MazF toxin sequence-specifically cleaves single-stranded RNA upon various stressful conditions, and it is activated as a part of the mazEF toxin–antitoxin module in Escherichia coli. Although autoregulation of mazEF expression through the MazE antitoxin-dependent transcriptional repression has been biochemically characterized, less is known about post-transcriptional autoregulation, as well as how both of these autoregulatory features affect growth of single cells during conditions that promote MazF production. Here, we demonstrate post-transcriptional autoregulation of mazF expression dynamics by MazF cleaving its own transcript. Single-cell analyses of bacterial populations during ectopic MazF production indicated that two-level autoregulation of mazEF expression influences cell-to-cell growth rate heterogeneity. The increase in growth rate heterogeneity is governed by the MazE antitoxin, and tuned by the MazF-dependent mazF mRNA cleavage. Also, both autoregulatory features grant rapid exit from the stress caused by mazF overexpression. Time-lapse microscopy revealed that MazF-mediated cleavage of mazF mRNA leads to increased temporal variability in length of individual cells during ectopic mazF overexpression, as explained by a stochastic model indicating that mazEF mRNA cleavage underlies temporal fluctuations in MazF levels during stress."}],"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"intvolume":"        46","volume":46,"date_created":"2018-12-11T11:46:29Z","author":[{"last_name":"Nikolic","full_name":"Nikolic, Nela","id":"42D9CABC-F248-11E8-B48F-1D18A9856A87","first_name":"Nela","orcid":"0000-0001-9068-6090"},{"first_name":"Tobias","orcid":"0000-0001-5396-4346","last_name":"Bergmiller","full_name":"Bergmiller, Tobias","id":"2C471CFA-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Alexandra","full_name":"Vandervelde, Alexandra","last_name":"Vandervelde"},{"full_name":"Albanese, Tanino","last_name":"Albanese","first_name":"Tanino"},{"first_name":"Lendert","last_name":"Gelens","full_name":"Gelens, Lendert"},{"first_name":"Isabella","full_name":"Moll, Isabella","last_name":"Moll"}],"scopus_import":"1","day":"06","oa_version":"Published Version","title":"Autoregulation of mazEF expression underlies growth heterogeneity in bacterial populations","date_published":"2018-04-06T00:00:00Z","project":[{"_id":"3AC91DDA-15DF-11EA-824D-93A3E7B544D1","name":"FWF Open Access Fund","call_identifier":"FWF"}],"publication":"Nucleic Acids Research","status":"public","isi":1,"year":"2018","external_id":{"isi":["000429009500021"]},"related_material":{"record":[{"status":"public","relation":"popular_science","id":"5569"}]},"quality_controlled":"1","page":"2918-2931","ddc":["576"],"date_updated":"2024-02-21T13:44:45Z","_id":"438","type":"journal_article","doi":"10.1093/nar/gky079","article_processing_charge":"Yes (in subscription journal)","publisher":"Oxford University Press"},{"date_created":"2018-12-11T11:44:19Z","volume":98,"title":"Quantum scarred eigenstates in a Rydberg atom chain: Entanglement, breakdown of thermalization, and stability to perturbations","oa_version":"Preprint","author":[{"first_name":"C J","last_name":"Turner","full_name":"Turner, C J"},{"full_name":"Michailidis, Alexios","id":"36EBAD38-F248-11E8-B48F-1D18A9856A87","last_name":"Michailidis","first_name":"Alexios","orcid":"0000-0002-8443-1064"},{"full_name":"Abanin, D A","last_name":"Abanin","first_name":"D A"},{"last_name":"Serbyn","id":"47809E7E-F248-11E8-B48F-1D18A9856A87","full_name":"Serbyn, Maksym","first_name":"Maksym","orcid":"0000-0002-2399-5827"},{"full_name":"Papić, Z","last_name":"Papić","first_name":"Z"}],"scopus_import":"1","day":"22","publication_status":"published","abstract":[{"text":"Recent realization of a kinetically constrained chain of Rydberg atoms by Bernien et al., [Nature (London) 551, 579 (2017)] resulted in the observation of unusual revivals in the many-body quantum dynamics. In our previous work [C. J. Turner et al., Nat. Phys. 14, 745 (2018)], such dynamics was attributed to the existence of “quantum scarred” eigenstates in the many-body spectrum of the experimentally realized model. Here, we present a detailed study of the eigenstate properties of the same model. We find that the majority of the eigenstates exhibit anomalous thermalization: the observable expectation values converge to their Gibbs ensemble values, but parametrically slower compared to the predictions of the eigenstate thermalization hypothesis (ETH). Amidst the thermalizing spectrum, we identify nonergodic eigenstates that strongly violate the ETH, whose number grows polynomially with system size. Previously, the same eigenstates were identified via large overlaps with certain product states, and were used to explain the revivals observed in experiment. Here, we find that these eigenstates, in addition to highly atypical expectation values of local observables, also exhibit subthermal entanglement entropy that scales logarithmically with the system size. Moreover, we identify an additional class of quantum scarred eigenstates, and discuss their manifestations in the dynamics starting from initial product states. We use forward scattering approximation to describe the structure and physical properties of quantum scarred eigenstates. Finally, we discuss the stability of quantum scars to various perturbations. We observe that quantum scars remain robust when the introduced perturbation is compatible with the forward scattering approximation. In contrast, the perturbations which most efficiently destroy quantum scars also lead to the restoration of “canonical” thermalization.","lang":"eng"}],"intvolume":"        98","acknowledged_ssus":[{"_id":"ScienComp"}],"article_number":"155134","department":[{"_id":"MaSe"}],"month":"10","arxiv":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","issue":"15","citation":{"mla":"Turner, C. J., et al. “Quantum Scarred Eigenstates in a Rydberg Atom Chain: Entanglement, Breakdown of Thermalization, and Stability to Perturbations.” <i>Physical Review B</i>, vol. 98, no. 15, 155134, American Physical Society, 2018, doi:<a href=\"https://doi.org/10.1103/PhysRevB.98.155134\">10.1103/PhysRevB.98.155134</a>.","apa":"Turner, C. J., Michailidis, A., Abanin, D. A., Serbyn, M., &#38; Papić, Z. (2018). Quantum scarred eigenstates in a Rydberg atom chain: Entanglement, breakdown of thermalization, and stability to perturbations. <i>Physical Review B</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevB.98.155134\">https://doi.org/10.1103/PhysRevB.98.155134</a>","chicago":"Turner, C J, Alexios Michailidis, D A Abanin, Maksym Serbyn, and Z Papić. “Quantum Scarred Eigenstates in a Rydberg Atom Chain: Entanglement, Breakdown of Thermalization, and Stability to Perturbations.” <i>Physical Review B</i>. American Physical Society, 2018. <a href=\"https://doi.org/10.1103/PhysRevB.98.155134\">https://doi.org/10.1103/PhysRevB.98.155134</a>.","ista":"Turner CJ, Michailidis A, Abanin DA, Serbyn M, Papić Z. 2018. Quantum scarred eigenstates in a Rydberg atom chain: Entanglement, breakdown of thermalization, and stability to perturbations. Physical Review B. 98(15), 155134.","short":"C.J. Turner, A. Michailidis, D.A. Abanin, M. Serbyn, Z. Papić, Physical Review B 98 (2018).","ieee":"C. J. Turner, A. Michailidis, D. A. Abanin, M. Serbyn, and Z. Papić, “Quantum scarred eigenstates in a Rydberg atom chain: Entanglement, breakdown of thermalization, and stability to perturbations,” <i>Physical Review B</i>, vol. 98, no. 15. American Physical Society, 2018.","ama":"Turner CJ, Michailidis A, Abanin DA, Serbyn M, Papić Z. Quantum scarred eigenstates in a Rydberg atom chain: Entanglement, breakdown of thermalization, and stability to perturbations. <i>Physical Review B</i>. 2018;98(15). doi:<a href=\"https://doi.org/10.1103/PhysRevB.98.155134\">10.1103/PhysRevB.98.155134</a>"},"language":[{"iso":"eng"}],"oa":1,"type":"journal_article","date_updated":"2023-10-10T13:28:49Z","_id":"44","publisher":"American Physical Society","doi":"10.1103/PhysRevB.98.155134","article_processing_charge":"No","quality_controlled":"1","main_file_link":[{"url":"https://arxiv.org/abs/1806.10933","open_access":"1"}],"publist_id":"8010","external_id":{"arxiv":["1806.10933"],"isi":["000447919100001"]},"isi":1,"year":"2018","date_published":"2018-10-22T00:00:00Z","publication":"Physical Review B","status":"public"},{"ddc":["576","581"],"quality_controlled":"1","article_processing_charge":"No","doi":"10.21769/BioProtoc.2685","publisher":"Bio-protocol","_id":"442","date_updated":"2024-10-29T10:22:43Z","type":"journal_article","status":"public","publication":"Bio-protocol","project":[{"call_identifier":"H2020","grant_number":"665385","name":"International IST Doctoral Program","_id":"2564DBCA-B435-11E9-9278-68D0E5697425"}],"ec_funded":1,"acknowledgement":"This protocol was adapted from Fendrych et al., 2016. This project has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 665385, and Austrian Science Fund (FWF) [M 2128-B21]. ","date_published":"2018-01-05T00:00:00Z","year":"2018","related_material":{"record":[{"id":"10083","relation":"dissertation_contains","status":"public"}]},"publist_id":"7381","has_accepted_license":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"intvolume":"         8","abstract":[{"text":"The rapid auxin-triggered growth of the Arabidopsis hypocotyls involves the nuclear TIR1/AFB-Aux/IAA signaling and is accompanied by acidification of the apoplast and cell walls (Fendrych et al., 2016). Here, we describe in detail the method for analysis of the elongation and the TIR1/AFB-Aux/IAA-dependent auxin response in hypocotyl segments as well as the determination of relative values of the cell wall pH.","lang":"eng"}],"file_date_updated":"2020-07-14T12:46:29Z","publication_status":"published","publication_identifier":{"eissn":["2331-8325"]},"day":"05","author":[{"first_name":"Lanxin","orcid":"0000-0002-5607-272X","last_name":"Li","id":"367EF8FA-F248-11E8-B48F-1D18A9856A87","full_name":"Li, Lanxin"},{"last_name":"Krens","full_name":"Krens, Gabriel","id":"2B819732-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-4761-5996","first_name":"Gabriel"},{"last_name":"Fendrych","id":"43905548-F248-11E8-B48F-1D18A9856A87","full_name":"Fendrych, Matyas","first_name":"Matyas","orcid":"0000-0002-9767-8699"},{"first_name":"Jirí","orcid":"0000-0002-8302-7596","full_name":"Friml, Jirí","id":"4159519E-F248-11E8-B48F-1D18A9856A87","last_name":"Friml"}],"title":"Real-time analysis of auxin response, cell wall pH and elongation in Arabidopsis thaliana Hypocotyls","oa_version":"Published Version","volume":8,"date_created":"2018-12-11T11:46:30Z","article_type":"original","oa":1,"pubrep_id":"970","language":[{"iso":"eng"}],"citation":{"apa":"Li, L., Krens, G., Fendrych, M., &#38; Friml, J. (2018). Real-time analysis of auxin response, cell wall pH and elongation in Arabidopsis thaliana Hypocotyls. <i>Bio-Protocol</i>. Bio-protocol. <a href=\"https://doi.org/10.21769/BioProtoc.2685\">https://doi.org/10.21769/BioProtoc.2685</a>","mla":"Li, Lanxin, et al. “Real-Time Analysis of Auxin Response, Cell Wall PH and Elongation in Arabidopsis Thaliana Hypocotyls.” <i>Bio-Protocol</i>, vol. 8, no. 1, Bio-protocol, 2018, doi:<a href=\"https://doi.org/10.21769/BioProtoc.2685\">10.21769/BioProtoc.2685</a>.","chicago":"Li, Lanxin, Gabriel Krens, Matyas Fendrych, and Jiří Friml. “Real-Time Analysis of Auxin Response, Cell Wall PH and Elongation in Arabidopsis Thaliana Hypocotyls.” <i>Bio-Protocol</i>. Bio-protocol, 2018. <a href=\"https://doi.org/10.21769/BioProtoc.2685\">https://doi.org/10.21769/BioProtoc.2685</a>.","ista":"Li L, Krens G, Fendrych M, Friml J. 2018. Real-time analysis of auxin response, cell wall pH and elongation in Arabidopsis thaliana Hypocotyls. Bio-protocol. 8(1).","ieee":"L. Li, G. Krens, M. Fendrych, and J. Friml, “Real-time analysis of auxin response, cell wall pH and elongation in Arabidopsis thaliana Hypocotyls,” <i>Bio-protocol</i>, vol. 8, no. 1. Bio-protocol, 2018.","short":"L. Li, G. Krens, M. Fendrych, J. Friml, Bio-Protocol 8 (2018).","ama":"Li L, Krens G, Fendrych M, Friml J. Real-time analysis of auxin response, cell wall pH and elongation in Arabidopsis thaliana Hypocotyls. <i>Bio-protocol</i>. 2018;8(1). doi:<a href=\"https://doi.org/10.21769/BioProtoc.2685\">10.21769/BioProtoc.2685</a>"},"issue":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","month":"01","department":[{"_id":"JiFr"},{"_id":"Bio"}],"file":[{"file_id":"5299","date_created":"2018-12-12T10:17:43Z","file_size":11352389,"date_updated":"2020-07-14T12:46:29Z","creator":"system","relation":"main_file","checksum":"6644ba698206eda32b0abf09128e63e3","file_name":"IST-2018-970-v1+1_2018_Lanxin_Real-time_analysis.pdf","content_type":"application/pdf","access_level":"open_access"}]},{"quality_controlled":"1","main_file_link":[{"url":"https://arxiv.org/abs/1606.07355","open_access":"1"}],"page":"577 - 614","type":"journal_article","_id":"446","date_updated":"2023-09-19T10:09:40Z","publisher":"Wiley-Blackwell","article_processing_charge":"No","doi":"10.1002/cpa.21717","date_published":"2018-03-01T00:00:00Z","acknowledgement":"We thank the referee for helpful suggestions that improved the presentation of the paper. We also acknowledge partial support by National Science Foundation Grant DMS-1363432 (R.L.F.), Austrian Science Fund (FWF) Project Nr. P 27533-N27 (P.T.N.), CONICYT (Chile) through CONICYT–PCHA/ Doctorado Nacional/2014, and Iniciativa Científica Milenio (Chile) through Millenium Nucleus RC–120002 “Física Matemática” (H.V.D.B.).\r\n","publication":"Communications on Pure and Applied Mathematics","status":"public","publist_id":"7377","external_id":{"isi":["000422675800004"],"arxiv":["1606.07355"]},"year":"2018","isi":1,"publication_status":"published","abstract":[{"text":"We prove that in Thomas–Fermi–Dirac–von Weizsäcker theory, a nucleus of charge Z &gt; 0 can bind at most Z + C electrons, where C is a universal constant. This result is obtained through a comparison with Thomas-Fermi theory which, as a by-product, gives bounds on the screened nuclear potential and the radius of the minimizer. A key ingredient of the proof is a novel technique to control the particles in the exterior region, which also applies to the liquid drop model with a nuclear background potential.","lang":"eng"}],"intvolume":"        71","date_created":"2018-12-11T11:46:31Z","article_type":"original","volume":71,"oa_version":"Preprint","title":"The ionization conjecture in Thomas–Fermi–Dirac–von Weizsäcker theory","day":"01","author":[{"first_name":"Rupert","last_name":"Frank","full_name":"Frank, Rupert"},{"first_name":"Nam","last_name":"Phan Thanh","id":"404092F4-F248-11E8-B48F-1D18A9856A87","full_name":"Phan Thanh, Nam"},{"full_name":"Van Den Bosch, Hanne","last_name":"Van Den Bosch","first_name":"Hanne"}],"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","citation":{"ieee":"R. Frank, P. Nam, and H. Van Den Bosch, “The ionization conjecture in Thomas–Fermi–Dirac–von Weizsäcker theory,” <i>Communications on Pure and Applied Mathematics</i>, vol. 71, no. 3. Wiley-Blackwell, pp. 577–614, 2018.","short":"R. Frank, P. Nam, H. Van Den Bosch, Communications on Pure and Applied Mathematics 71 (2018) 577–614.","ama":"Frank R, Nam P, Van Den Bosch H. The ionization conjecture in Thomas–Fermi–Dirac–von Weizsäcker theory. <i>Communications on Pure and Applied Mathematics</i>. 2018;71(3):577-614. doi:<a href=\"https://doi.org/10.1002/cpa.21717\">10.1002/cpa.21717</a>","apa":"Frank, R., Nam, P., &#38; Van Den Bosch, H. (2018). The ionization conjecture in Thomas–Fermi–Dirac–von Weizsäcker theory. <i>Communications on Pure and Applied Mathematics</i>. Wiley-Blackwell. <a href=\"https://doi.org/10.1002/cpa.21717\">https://doi.org/10.1002/cpa.21717</a>","mla":"Frank, Rupert, et al. “The Ionization Conjecture in Thomas–Fermi–Dirac–von Weizsäcker Theory.” <i>Communications on Pure and Applied Mathematics</i>, vol. 71, no. 3, Wiley-Blackwell, 2018, pp. 577–614, doi:<a href=\"https://doi.org/10.1002/cpa.21717\">10.1002/cpa.21717</a>.","ista":"Frank R, Nam P, Van Den Bosch H. 2018. The ionization conjecture in Thomas–Fermi–Dirac–von Weizsäcker theory. Communications on Pure and Applied Mathematics. 71(3), 577–614.","chicago":"Frank, Rupert, Phan Nam, and Hanne Van Den Bosch. “The Ionization Conjecture in Thomas–Fermi–Dirac–von Weizsäcker Theory.” <i>Communications on Pure and Applied Mathematics</i>. Wiley-Blackwell, 2018. <a href=\"https://doi.org/10.1002/cpa.21717\">https://doi.org/10.1002/cpa.21717</a>."},"issue":"3","language":[{"iso":"eng"}],"oa":1,"department":[{"_id":"RoSe"}],"arxiv":1,"month":"03"},{"file_date_updated":"2020-07-14T12:46:30Z","publication_status":"published","has_accepted_license":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"abstract":[{"text":"Around 150 million years ago, eusocial termites evolved from within the cockroaches, 50 million years before eusocial Hymenoptera, such as bees and ants, appeared. Here, we report the 2-Gb genome of the German cockroach, Blattella germanica, and the 1.3-Gb genome of the drywood termite Cryptotermes secundus. We show evolutionary signatures of termite eusociality by comparing the genomes and transcriptomes of three termites and the cockroach against the background of 16 other eusocial and non-eusocial insects. Dramatic adaptive changes in genes underlying the production and perception of pheromones confirm the importance of chemical communication in the termites. These are accompanied by major changes in gene regulation and the molecular evolution of caste determination. Many of these results parallel molecular mechanisms of eusocial evolution in Hymenoptera. However, the specific solutions are remarkably different, thus revealing a striking case of convergence in one of the major evolutionary transitions in biological complexity.","lang":"eng"}],"intvolume":"         2","volume":2,"date_created":"2018-12-11T11:46:32Z","scopus_import":"1","day":"05","author":[{"first_name":"Mark","last_name":"Harrison","full_name":"Harrison, Mark"},{"first_name":"Evelien","full_name":"Jongepier, Evelien","last_name":"Jongepier"},{"first_name":"Hugh","last_name":"Robertson","full_name":"Robertson, Hugh"},{"first_name":"Nicolas","last_name":"Arning","full_name":"Arning, Nicolas"},{"first_name":"Tristan","full_name":"Bitard Feildel, Tristan","last_name":"Bitard Feildel"},{"first_name":"Hsu","full_name":"Chao, Hsu","last_name":"Chao"},{"full_name":"Childers, Christopher","last_name":"Childers","first_name":"Christopher"},{"first_name":"Huyen","full_name":"Dinh, Huyen","last_name":"Dinh"},{"first_name":"Harshavardhan","last_name":"Doddapaneni","full_name":"Doddapaneni, Harshavardhan"},{"full_name":"Dugan, Shannon","last_name":"Dugan","first_name":"Shannon"},{"first_name":"Johannes","full_name":"Gowin, Johannes","last_name":"Gowin"},{"full_name":"Greiner, Carolin","last_name":"Greiner","first_name":"Carolin"},{"last_name":"Han","full_name":"Han, Yi","first_name":"Yi"},{"full_name":"Hu, Haofu","last_name":"Hu","first_name":"Haofu"},{"full_name":"Hughes, Daniel","last_name":"Hughes","first_name":"Daniel"},{"first_name":"Ann K","orcid":"0000-0001-8871-4961","id":"4C0A3874-F248-11E8-B48F-1D18A9856A87","full_name":"Huylmans, Ann K","last_name":"Huylmans"},{"full_name":"Kemena, Karsten","last_name":"Kemena","first_name":"Karsten"},{"last_name":"Kremer","full_name":"Kremer, Lukas","first_name":"Lukas"},{"first_name":"Sandra","full_name":"Lee, Sandra","last_name":"Lee"},{"first_name":"Alberto","last_name":"López Ezquerra","full_name":"López Ezquerra, Alberto"},{"full_name":"Mallet, Ludovic","last_name":"Mallet","first_name":"Ludovic"},{"last_name":"Monroy Kuhn","full_name":"Monroy Kuhn, Jose","first_name":"Jose"},{"last_name":"Moser","full_name":"Moser, Annabell","first_name":"Annabell"},{"first_name":"Shwetha","last_name":"Murali","full_name":"Murali, Shwetha"},{"full_name":"Muzny, Donna","last_name":"Muzny","first_name":"Donna"},{"first_name":"Saria","last_name":"Otani","full_name":"Otani, Saria"},{"first_name":"Maria","full_name":"Piulachs, Maria","last_name":"Piulachs"},{"first_name":"Monica","last_name":"Poelchau","full_name":"Poelchau, Monica"},{"full_name":"Qu, Jiaxin","last_name":"Qu","first_name":"Jiaxin"},{"full_name":"Schaub, Florentine","last_name":"Schaub","first_name":"Florentine"},{"full_name":"Wada Katsumata, Ayako","last_name":"Wada Katsumata","first_name":"Ayako"},{"first_name":"Kim","full_name":"Worley, Kim","last_name":"Worley"},{"full_name":"Xie, Qiaolin","last_name":"Xie","first_name":"Qiaolin"},{"last_name":"Ylla","full_name":"Ylla, Guillem","first_name":"Guillem"},{"full_name":"Poulsen, Michael","last_name":"Poulsen","first_name":"Michael"},{"first_name":"Richard","full_name":"Gibbs, Richard","last_name":"Gibbs"},{"full_name":"Schal, Coby","last_name":"Schal","first_name":"Coby"},{"last_name":"Richards","full_name":"Richards, Stephen","first_name":"Stephen"},{"last_name":"Belles","full_name":"Belles, Xavier","first_name":"Xavier"},{"last_name":"Korb","full_name":"Korb, Judith","first_name":"Judith"},{"full_name":"Bornberg Bauer, Erich","last_name":"Bornberg Bauer","first_name":"Erich"}],"title":"Hemimetabolous genomes reveal molecular basis of termite eusociality","oa_version":"Published Version","citation":{"ama":"Harrison M, Jongepier E, Robertson H, et al. Hemimetabolous genomes reveal molecular basis of termite eusociality. <i>Nature Ecology and Evolution</i>. 2018;2(3):557-566. doi:<a href=\"https://doi.org/10.1038/s41559-017-0459-1\">10.1038/s41559-017-0459-1</a>","short":"M. Harrison, E. Jongepier, H. Robertson, N. Arning, T. Bitard Feildel, H. Chao, C. Childers, H. Dinh, H. Doddapaneni, S. Dugan, J. Gowin, C. Greiner, Y. Han, H. Hu, D. Hughes, A.K. Huylmans, K. Kemena, L. Kremer, S. Lee, A. López Ezquerra, L. Mallet, J. Monroy Kuhn, A. Moser, S. Murali, D. Muzny, S. Otani, M. Piulachs, M. Poelchau, J. Qu, F. Schaub, A. Wada Katsumata, K. Worley, Q. Xie, G. Ylla, M. Poulsen, R. Gibbs, C. Schal, S. Richards, X. Belles, J. Korb, E. Bornberg Bauer, Nature Ecology and Evolution 2 (2018) 557–566.","ieee":"M. Harrison <i>et al.</i>, “Hemimetabolous genomes reveal molecular basis of termite eusociality,” <i>Nature Ecology and Evolution</i>, vol. 2, no. 3. Springer Nature, pp. 557–566, 2018.","chicago":"Harrison, Mark, Evelien Jongepier, Hugh Robertson, Nicolas Arning, Tristan Bitard Feildel, Hsu Chao, Christopher Childers, et al. “Hemimetabolous Genomes Reveal Molecular Basis of Termite Eusociality.” <i>Nature Ecology and Evolution</i>. Springer Nature, 2018. <a href=\"https://doi.org/10.1038/s41559-017-0459-1\">https://doi.org/10.1038/s41559-017-0459-1</a>.","ista":"Harrison M, Jongepier E, Robertson H, Arning N, Bitard Feildel T, Chao H, Childers C, Dinh H, Doddapaneni H, Dugan S, Gowin J, Greiner C, Han Y, Hu H, Hughes D, Huylmans AK, Kemena K, Kremer L, Lee S, López Ezquerra A, Mallet L, Monroy Kuhn J, Moser A, Murali S, Muzny D, Otani S, Piulachs M, Poelchau M, Qu J, Schaub F, Wada Katsumata A, Worley K, Xie Q, Ylla G, Poulsen M, Gibbs R, Schal C, Richards S, Belles X, Korb J, Bornberg Bauer E. 2018. Hemimetabolous genomes reveal molecular basis of termite eusociality. Nature Ecology and Evolution. 2(3), 557–566.","mla":"Harrison, Mark, et al. “Hemimetabolous Genomes Reveal Molecular Basis of Termite Eusociality.” <i>Nature Ecology and Evolution</i>, vol. 2, no. 3, Springer Nature, 2018, pp. 557–66, doi:<a href=\"https://doi.org/10.1038/s41559-017-0459-1\">10.1038/s41559-017-0459-1</a>.","apa":"Harrison, M., Jongepier, E., Robertson, H., Arning, N., Bitard Feildel, T., Chao, H., … Bornberg Bauer, E. (2018). Hemimetabolous genomes reveal molecular basis of termite eusociality. <i>Nature Ecology and Evolution</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41559-017-0459-1\">https://doi.org/10.1038/s41559-017-0459-1</a>"},"issue":"3","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","oa":1,"language":[{"iso":"eng"}],"pubrep_id":"969","department":[{"_id":"BeVi"}],"file":[{"date_updated":"2020-07-14T12:46:30Z","creator":"system","file_size":3730583,"date_created":"2018-12-12T10:09:08Z","file_id":"4731","content_type":"application/pdf","access_level":"open_access","file_name":"IST-2018-969-v1+1_2018_Huylmans_Hemimetabolous_genomes.pdf","checksum":"874953136ac125e65f37971d3cabc5b7","relation":"main_file"}],"month":"02","quality_controlled":"1","page":"557-566","ddc":["576"],"_id":"448","date_updated":"2023-09-11T14:10:57Z","type":"journal_article","article_processing_charge":"No","doi":"10.1038/s41559-017-0459-1","publisher":"Springer Nature","acknowledgement":"We thank O. Niehuis for allowing use of the unpublished E. danica genome, J. Gadau and C. Smith for comments and advice on the manuscript, and J. Schmitz for assistance with analyses and proofreading the manuscript. J.K. thanks Charles Darwin University (Australia), especially S. Garnett and the Horticulture and Aquaculture team, for providing logistic support to collect C. secundus. The Parks and Wildlife Commission, Northern Territory, the Department of the Environment, Water, Heritage and the Arts gave permission to collect (Permit number 36401) and export (Permit WT2010-6997) the termites. USDA is an equal opportunity provider and employer. M.C.H. and E.J. are supported by DFG grant BO2544/11-1 to E.B.-B. J.K. is supported by University of Osnabrück and DFG grant KO1895/16-1. X.B. and M.-D.P. are supported by Spanish Ministerio de Economía y Competitividad (CGL2012-36251 and CGL2015-64727-P to X.B., and CGL2016-76011-R to M.-D.P.), including FEDER funds, and by Catalan Government (2014 SGR 619). C.S. is supported by grants from the US Department of Housing and Urban Development (NCHHU-0017-13), the National Science Foundation (IOS-1557864), the Alfred P. Sloan Foundation (2013-5-35 MBE), the National Institute of Environmental Health Sciences (P30ES025128) to the Center for Human Health and the Environment, and the Blanton J. Whitmire Endowment. M.P. is supported by a Villum Kann Rasmussen Young Investigator Fellowship (VKR10101).","date_published":"2018-02-05T00:00:00Z","publication":"Nature Ecology and Evolution","status":"public","publist_id":"7375","isi":1,"year":"2018","related_material":{"record":[{"relation":"research_data","status":"public","id":"9841"}]},"external_id":{"isi":["000426559600026"]}},{"type":"journal_article","date_updated":"2025-05-07T11:12:28Z","_id":"449","publisher":"Public Library of Science","doi":"10.1371/journal.pgen.1007177","article_processing_charge":"Yes","quality_controlled":"1","ddc":["581"],"publist_id":"7373","external_id":{"isi":["000423718600034"]},"related_material":{"record":[{"relation":"dissertation_contains","status":"public","id":"1127"},{"id":"7172","relation":"dissertation_contains","status":"public"},{"id":"8822","status":"public","relation":"dissertation_contains"}]},"isi":1,"year":"2018","date_published":"2018-01-29T00:00:00Z","ec_funded":1,"project":[{"call_identifier":"FP7","grant_number":"282300","name":"Polarity and subcellular dynamics in plants","_id":"25716A02-B435-11E9-9278-68D0E5697425"}],"status":"public","publication":"PLoS Genetics","date_created":"2018-12-11T11:46:32Z","volume":14,"oa_version":"Published Version","title":"WRKY23 is a component of the transcriptional network mediating auxin feedback on PIN polarity","author":[{"first_name":"Tomas","last_name":"Prat","full_name":"Prat, Tomas","id":"3DA3BFEE-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Hajny","full_name":"Hajny, Jakub","id":"4800CC20-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-2140-7195","first_name":"Jakub"},{"last_name":"Grunewald","full_name":"Grunewald, Wim","first_name":"Wim"},{"first_name":"Mina K","last_name":"Vasileva","id":"3407EB18-F248-11E8-B48F-1D18A9856A87","full_name":"Vasileva, Mina K"},{"last_name":"Molnar","id":"34F1AF46-F248-11E8-B48F-1D18A9856A87","full_name":"Molnar, Gergely","first_name":"Gergely"},{"last_name":"Tejos","full_name":"Tejos, Ricardo","first_name":"Ricardo"},{"first_name":"Markus","full_name":"Schmid, Markus","last_name":"Schmid"},{"full_name":"Sauer, Michael","last_name":"Sauer","first_name":"Michael"},{"last_name":"Friml","id":"4159519E-F248-11E8-B48F-1D18A9856A87","full_name":"Friml, Jirí","first_name":"Jirí","orcid":"0000-0002-8302-7596"}],"day":"29","scopus_import":"1","publication_status":"published","file_date_updated":"2020-07-14T12:46:30Z","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"abstract":[{"lang":"eng","text":"Auxin is unique among plant hormones due to its directional transport that is mediated by the polarly distributed PIN auxin transporters at the plasma membrane. The canalization hypothesis proposes that the auxin feedback on its polar flow is a crucial, plant-specific mechanism mediating multiple self-organizing developmental processes. Here, we used the auxin effect on the PIN polar localization in Arabidopsis thaliana roots as a proxy for the auxin feedback on the PIN polarity during canalization. We performed microarray experiments to find regulators of this process that act downstream of auxin. We identified genes that were transcriptionally regulated by auxin in an AXR3/IAA17- and ARF7/ARF19-dependent manner. Besides the known components of the PIN polarity, such as PID and PIP5K kinases, a number of potential new regulators were detected, among which the WRKY23 transcription factor, which was characterized in more detail. Gain- and loss-of-function mutants confirmed a role for WRKY23 in mediating the auxin effect on the PIN polarity. Accordingly, processes requiring auxin-mediated PIN polarity rearrangements, such as vascular tissue development during leaf venation, showed a higher WRKY23 expression and required the WRKY23 activity. Our results provide initial insights into the auxin transcriptional network acting upstream of PIN polarization and, potentially, canalization-mediated plant development."}],"intvolume":"        14","has_accepted_license":"1","file":[{"file_size":24709062,"date_created":"2018-12-12T10:10:52Z","date_updated":"2020-07-14T12:46:30Z","creator":"system","file_id":"4843","file_name":"IST-2018-967-v1+1_journal.pgen.1007177.pdf","access_level":"open_access","content_type":"application/pdf","relation":"main_file","checksum":"0276d66788ec076f4924164a39e6a712"}],"department":[{"_id":"JiFr"}],"month":"01","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","issue":"1","citation":{"chicago":"Prat, Tomas, Jakub Hajny, Wim Grunewald, Mina K Vasileva, Gergely Molnar, Ricardo Tejos, Markus Schmid, Michael Sauer, and Jiří Friml. “WRKY23 Is a Component of the Transcriptional Network Mediating Auxin Feedback on PIN Polarity.” <i>PLoS Genetics</i>. Public Library of Science, 2018. <a href=\"https://doi.org/10.1371/journal.pgen.1007177\">https://doi.org/10.1371/journal.pgen.1007177</a>.","ista":"Prat T, Hajny J, Grunewald W, Vasileva MK, Molnar G, Tejos R, Schmid M, Sauer M, Friml J. 2018. WRKY23 is a component of the transcriptional network mediating auxin feedback on PIN polarity. PLoS Genetics. 14(1).","apa":"Prat, T., Hajny, J., Grunewald, W., Vasileva, M. K., Molnar, G., Tejos, R., … Friml, J. (2018). WRKY23 is a component of the transcriptional network mediating auxin feedback on PIN polarity. <i>PLoS Genetics</i>. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pgen.1007177\">https://doi.org/10.1371/journal.pgen.1007177</a>","mla":"Prat, Tomas, et al. “WRKY23 Is a Component of the Transcriptional Network Mediating Auxin Feedback on PIN Polarity.” <i>PLoS Genetics</i>, vol. 14, no. 1, Public Library of Science, 2018, doi:<a href=\"https://doi.org/10.1371/journal.pgen.1007177\">10.1371/journal.pgen.1007177</a>.","ama":"Prat T, Hajny J, Grunewald W, et al. WRKY23 is a component of the transcriptional network mediating auxin feedback on PIN polarity. <i>PLoS Genetics</i>. 2018;14(1). doi:<a href=\"https://doi.org/10.1371/journal.pgen.1007177\">10.1371/journal.pgen.1007177</a>","ieee":"T. Prat <i>et al.</i>, “WRKY23 is a component of the transcriptional network mediating auxin feedback on PIN polarity,” <i>PLoS Genetics</i>, vol. 14, no. 1. Public Library of Science, 2018.","short":"T. Prat, J. Hajny, W. Grunewald, M.K. Vasileva, G. Molnar, R. Tejos, M. Schmid, M. Sauer, J. Friml, PLoS Genetics 14 (2018)."},"pubrep_id":"967","language":[{"iso":"eng"}],"oa":1},{"pubrep_id":"964","language":[{"iso":"eng"}],"oa":1,"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","citation":{"short":"J. Reiter, C. Hilbe, D. Rand, K. Chatterjee, M. Nowak, Nature Communications 9 (2018).","ieee":"J. Reiter, C. Hilbe, D. Rand, K. Chatterjee, and M. Nowak, “Crosstalk in concurrent repeated games impedes direct reciprocity and requires stronger levels of forgiveness,” <i>Nature Communications</i>, vol. 9, no. 1. Nature Publishing Group, 2018.","ama":"Reiter J, Hilbe C, Rand D, Chatterjee K, Nowak M. Crosstalk in concurrent repeated games impedes direct reciprocity and requires stronger levels of forgiveness. <i>Nature Communications</i>. 2018;9(1). doi:<a href=\"https://doi.org/10.1038/s41467-017-02721-8\">10.1038/s41467-017-02721-8</a>","mla":"Reiter, Johannes, et al. “Crosstalk in Concurrent Repeated Games Impedes Direct Reciprocity and Requires Stronger Levels of Forgiveness.” <i>Nature Communications</i>, vol. 9, no. 1, 555, Nature Publishing Group, 2018, doi:<a href=\"https://doi.org/10.1038/s41467-017-02721-8\">10.1038/s41467-017-02721-8</a>.","apa":"Reiter, J., Hilbe, C., Rand, D., Chatterjee, K., &#38; Nowak, M. (2018). Crosstalk in concurrent repeated games impedes direct reciprocity and requires stronger levels of forgiveness. <i>Nature Communications</i>. Nature Publishing Group. <a href=\"https://doi.org/10.1038/s41467-017-02721-8\">https://doi.org/10.1038/s41467-017-02721-8</a>","ista":"Reiter J, Hilbe C, Rand D, Chatterjee K, Nowak M. 2018. Crosstalk in concurrent repeated games impedes direct reciprocity and requires stronger levels of forgiveness. Nature Communications. 9(1), 555.","chicago":"Reiter, Johannes, Christian Hilbe, David Rand, Krishnendu Chatterjee, and Martin Nowak. “Crosstalk in Concurrent Repeated Games Impedes Direct Reciprocity and Requires Stronger Levels of Forgiveness.” <i>Nature Communications</i>. Nature Publishing Group, 2018. <a href=\"https://doi.org/10.1038/s41467-017-02721-8\">https://doi.org/10.1038/s41467-017-02721-8</a>."},"issue":"1","month":"02","file":[{"checksum":"b6b90367545b4c615891c960ab0567f1","relation":"main_file","content_type":"application/pdf","access_level":"open_access","file_name":"IST-2018-964-v1+1_2018_Hilbe_Crosstalk_in.pdf","file_id":"4741","creator":"system","date_updated":"2020-07-14T12:46:31Z","date_created":"2018-12-12T10:09:18Z","file_size":843646}],"article_number":"555","department":[{"_id":"KrCh"}],"intvolume":"         9","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"abstract":[{"text":"Direct reciprocity is a mechanism for cooperation among humans. Many of our daily interactions are repeated. We interact repeatedly with our family, friends, colleagues, members of the local and even global community. In the theory of repeated games, it is a tacit assumption that the various games that a person plays simultaneously have no effect on each other. Here we introduce a general framework that allows us to analyze “crosstalk” between a player’s concurrent games. In the presence of crosstalk, the action a person experiences in one game can alter the person’s decision in another. We find that crosstalk impedes the maintenance of cooperation and requires stronger levels of forgiveness. The magnitude of the effect depends on the population structure. In more densely connected social groups, crosstalk has a stronger effect. A harsh retaliator, such as Tit-for-Tat, is unable to counteract crosstalk. The crosstalk framework provides a unified interpretation of direct and upstream reciprocity in the context of repeated games.","lang":"eng"}],"has_accepted_license":"1","file_date_updated":"2020-07-14T12:46:31Z","publication_status":"published","title":"Crosstalk in concurrent repeated games impedes direct reciprocity and requires stronger levels of forgiveness","oa_version":"Published Version","scopus_import":"1","day":"07","author":[{"orcid":"0000-0002-0170-7353","first_name":"Johannes","id":"4A918E98-F248-11E8-B48F-1D18A9856A87","full_name":"Reiter, Johannes","last_name":"Reiter"},{"id":"2FDF8F3C-F248-11E8-B48F-1D18A9856A87","full_name":"Hilbe, Christian","last_name":"Hilbe","first_name":"Christian","orcid":"0000-0001-5116-955X"},{"first_name":"David","last_name":"Rand","full_name":"Rand, David"},{"id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","full_name":"Chatterjee, Krishnendu","last_name":"Chatterjee","first_name":"Krishnendu","orcid":"0000-0002-4561-241X"},{"first_name":"Martin","last_name":"Nowak","full_name":"Nowak, Martin"}],"date_created":"2018-12-11T11:46:34Z","volume":9,"status":"public","publication":"Nature Communications","project":[{"grant_number":"279307","name":"Quantitative Graph Games: Theory and Applications","call_identifier":"FP7","_id":"2581B60A-B435-11E9-9278-68D0E5697425"},{"_id":"2584A770-B435-11E9-9278-68D0E5697425","call_identifier":"FWF","name":"Modern Graph Algorithmic Techniques in Formal Verification","grant_number":"P 23499-N23"},{"_id":"25863FF4-B435-11E9-9278-68D0E5697425","name":"Game Theory","grant_number":"S11407","call_identifier":"FWF"},{"_id":"25681D80-B435-11E9-9278-68D0E5697425","call_identifier":"FP7","grant_number":"291734","name":"International IST Postdoc Fellowship Programme"}],"acknowledgement":"This work was supported by the European Research Council (ERC) start grant 279307: Graph Games (C.K.), Austrian Science Fund (FWF) grant no P23499-N23 (C.K.), FWF\r\nNFN grant no S11407-N23 RiSE/SHiNE (C.K.), Office of Naval Research grant N00014-16-1-2914 (M.A.N.), National Cancer Institute grant CA179991 (M.A.N.) and by the John Templeton Foundation. J.G.R. is supported by an Erwin Schrödinger fellowship\r\n(Austrian Science Fund FWF J-3996). C.H. acknowledges generous support from the\r\nISTFELLOW program. The Program for Evolutionary Dynamics is supported in part by\r\na gift from B Wu and Eric Larson.","date_published":"2018-02-07T00:00:00Z","ec_funded":1,"external_id":{"isi":["000424318200001"]},"isi":1,"year":"2018","publist_id":"7368","ddc":["004"],"quality_controlled":"1","publisher":"Nature Publishing Group","article_processing_charge":"No","doi":"10.1038/s41467-017-02721-8","type":"journal_article","_id":"454","date_updated":"2023-09-11T12:51:03Z"},{"doi":"10.1007/s00023-018-0644-z","alternative_title":["Annales Henri Poincare"],"article_processing_charge":"No","publisher":"Birkhäuser","date_updated":"2023-09-19T10:07:41Z","_id":"455","type":"journal_article","page":"1167 - 1214","ddc":["510","539"],"quality_controlled":"1","year":"2018","isi":1,"external_id":{"isi":["000427578900006"]},"publist_id":"7367","status":"public","publication":"Annales Henri Poincare","acknowledgement":"Open access funding provided by Institute of Science and Technology (IST Austria). The authors acknowledge support by ERC Advanced Grant 321029 and by VILLUM FONDEN via the QMATH Centre of Excellence (Grant No. 10059). The authors would like to thank Sébastien Breteaux, Enno Lenzmann, Mathieu Lewin and Jochen Schmid for comments and discussions about well-posedness of the Bogoliubov–de Gennes equations.","date_published":"2018-04-01T00:00:00Z","author":[{"first_name":"Niels P","orcid":"0000-0002-1071-6091","full_name":"Benedikter, Niels P","id":"3DE6C32A-F248-11E8-B48F-1D18A9856A87","last_name":"Benedikter"},{"last_name":"Sok","full_name":"Sok, Jérémy","first_name":"Jérémy"},{"first_name":"Jan","full_name":"Solovej, Jan","last_name":"Solovej"}],"scopus_import":"1","day":"01","title":"The Dirac–Frenkel principle for reduced density matrices and the Bogoliubov–de Gennes equations","oa_version":"Published Version","volume":19,"date_created":"2018-12-11T11:46:34Z","has_accepted_license":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"intvolume":"        19","abstract":[{"lang":"eng","text":"The derivation of effective evolution equations is central to the study of non-stationary quantum many-body systems, and widely used in contexts such as superconductivity, nuclear physics, Bose–Einstein condensation and quantum chemistry. We reformulate the Dirac–Frenkel approximation principle in terms of reduced density matrices and apply it to fermionic and bosonic many-body systems. We obtain the Bogoliubov–de Gennes and Hartree–Fock–Bogoliubov equations, respectively. While we do not prove quantitative error estimates, our formulation does show that the approximation is optimal within the class of quasifree states. Furthermore, we prove well-posedness of the Bogoliubov–de Gennes equations in energy space and discuss conserved quantities"}],"publication_status":"published","file_date_updated":"2020-07-14T12:46:31Z","month":"04","department":[{"_id":"RoSe"}],"file":[{"date_updated":"2020-07-14T12:46:31Z","creator":"system","file_size":923252,"date_created":"2018-12-12T10:11:57Z","file_id":"4914","content_type":"application/pdf","access_level":"open_access","file_name":"IST-2018-993-v1+1_2018_Benedikter_Dirac.pdf","checksum":"883eeccba8384ad7fcaa28761d99a0fa","relation":"main_file"}],"oa":1,"pubrep_id":"993","language":[{"iso":"eng"}],"issue":"4","citation":{"apa":"Benedikter, N. P., Sok, J., &#38; Solovej, J. (2018). The Dirac–Frenkel principle for reduced density matrices and the Bogoliubov–de Gennes equations. <i>Annales Henri Poincare</i>. Birkhäuser. <a href=\"https://doi.org/10.1007/s00023-018-0644-z\">https://doi.org/10.1007/s00023-018-0644-z</a>","mla":"Benedikter, Niels P., et al. “The Dirac–Frenkel Principle for Reduced Density Matrices and the Bogoliubov–de Gennes Equations.” <i>Annales Henri Poincare</i>, vol. 19, no. 4, Birkhäuser, 2018, pp. 1167–214, doi:<a href=\"https://doi.org/10.1007/s00023-018-0644-z\">10.1007/s00023-018-0644-z</a>.","chicago":"Benedikter, Niels P, Jérémy Sok, and Jan Solovej. “The Dirac–Frenkel Principle for Reduced Density Matrices and the Bogoliubov–de Gennes Equations.” <i>Annales Henri Poincare</i>. Birkhäuser, 2018. <a href=\"https://doi.org/10.1007/s00023-018-0644-z\">https://doi.org/10.1007/s00023-018-0644-z</a>.","ista":"Benedikter NP, Sok J, Solovej J. 2018. The Dirac–Frenkel principle for reduced density matrices and the Bogoliubov–de Gennes equations. Annales Henri Poincare. 19(4), 1167–1214.","ieee":"N. P. Benedikter, J. Sok, and J. Solovej, “The Dirac–Frenkel principle for reduced density matrices and the Bogoliubov–de Gennes equations,” <i>Annales Henri Poincare</i>, vol. 19, no. 4. Birkhäuser, pp. 1167–1214, 2018.","short":"N.P. Benedikter, J. Sok, J. Solovej, Annales Henri Poincare 19 (2018) 1167–1214.","ama":"Benedikter NP, Sok J, Solovej J. The Dirac–Frenkel principle for reduced density matrices and the Bogoliubov–de Gennes equations. <i>Annales Henri Poincare</i>. 2018;19(4):1167-1214. doi:<a href=\"https://doi.org/10.1007/s00023-018-0644-z\">10.1007/s00023-018-0644-z</a>"},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1"},{"status":"public","publication":"Journal fur die Reine und Angewandte Mathematik","extern":"1","date_published":"2017-10-01T00:00:00Z","acknowledgement":"While working on this paper the authors were supported by the Leverhulme Trust and ERC grant 306457.","related_material":{"record":[{"status":"public","relation":"earlier_version","id":"271"}]},"external_id":{"arxiv":["1402.4489"]},"year":"2017","publist_id":"7646","page":"122","quality_controlled":"1","main_file_link":[{"url":"https://arxiv.org/abs/1402.4489","open_access":"1"}],"publisher":"Walter de Gruyter","article_processing_charge":"No","doi":"10.1515/crelle-2014-0122","type":"journal_article","_id":"256","date_updated":"2024-03-05T12:09:21Z","language":[{"iso":"eng"}],"oa":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"chicago":"Browning, Timothy D, and Sean Prendiville. “Improvements in Birch’s Theorem on Forms in Many Variables.” <i>Journal Fur Die Reine Und Angewandte Mathematik</i>. Walter de Gruyter, 2017. <a href=\"https://doi.org/10.1515/crelle-2014-0122\">https://doi.org/10.1515/crelle-2014-0122</a>.","ista":"Browning TD, Prendiville S. 2017. Improvements in Birch’s theorem on forms in many variables. Journal fur die Reine und Angewandte Mathematik. 2017(731), 122.","apa":"Browning, T. D., &#38; Prendiville, S. (2017). Improvements in Birch’s theorem on forms in many variables. <i>Journal Fur Die Reine Und Angewandte Mathematik</i>. Walter de Gruyter. <a href=\"https://doi.org/10.1515/crelle-2014-0122\">https://doi.org/10.1515/crelle-2014-0122</a>","mla":"Browning, Timothy D., and Sean Prendiville. “Improvements in Birch’s Theorem on Forms in Many Variables.” <i>Journal Fur Die Reine Und Angewandte Mathematik</i>, vol. 2017, no. 731, Walter de Gruyter, 2017, p. 122, doi:<a href=\"https://doi.org/10.1515/crelle-2014-0122\">10.1515/crelle-2014-0122</a>.","ama":"Browning TD, Prendiville S. Improvements in Birch’s theorem on forms in many variables. <i>Journal fur die Reine und Angewandte Mathematik</i>. 2017;2017(731):122. doi:<a href=\"https://doi.org/10.1515/crelle-2014-0122\">10.1515/crelle-2014-0122</a>","ieee":"T. D. Browning and S. Prendiville, “Improvements in Birch’s theorem on forms in many variables,” <i>Journal fur die Reine und Angewandte Mathematik</i>, vol. 2017, no. 731. Walter de Gruyter, p. 122, 2017.","short":"T.D. Browning, S. Prendiville, Journal Fur Die Reine Und Angewandte Mathematik 2017 (2017) 122."},"issue":"731","month":"10","arxiv":1,"abstract":[{"text":"We show that a non-singular integral form of degree d is soluble over the integers if and only if it is soluble over ℝ and over ℚp for all primes p, provided that the form has at least (d - 1/2 √d)2d variables. This improves on a longstanding result of Birch.","lang":"eng"}],"intvolume":"      2017","publication_status":"published","publication_identifier":{"issn":["0075-4102"]},"title":"Improvements in Birch's theorem on forms in many variables","oa_version":"Preprint","day":"01","author":[{"last_name":"Browning","full_name":"Browning, Timothy D","id":"35827D50-F248-11E8-B48F-1D18A9856A87","first_name":"Timothy D","orcid":"0000-0002-8314-0177"},{"full_name":"Prendiville, Sean","last_name":"Prendiville","first_name":"Sean"}],"date_created":"2018-12-11T11:45:28Z","article_type":"original","volume":2017},{"status":"public","extern":"1","publication":"Geometric Methods in Algebra and Number Theory","acknowledgement":"While working on this paper the first author was supported by ERC grant 306457.","date_published":"2017-09-07T00:00:00Z","year":"2017","external_id":{"arxiv":["1611.00553"]},"publist_id":"7637","page":"1657 - 1675","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1611.00553"}],"quality_controlled":"1","article_processing_charge":"No","doi":"10.2140/ant.2017.11.1657","publisher":" Mathematical Sciences Publishers","_id":"265","date_updated":"2024-03-05T11:43:38Z","type":"journal_article","oa":1,"language":[{"iso":"eng"}],"citation":{"short":"T.D. Browning, P. Vishe, Geometric Methods in Algebra and Number Theory 11 (2017) 1657–1675.","ieee":"T. D. Browning and P. Vishe, “Rational curves on smooth hypersurfaces of low degree,” <i>Geometric Methods in Algebra and Number Theory</i>, vol. 11, no. 7.  Mathematical Sciences Publishers, pp. 1657–1675, 2017.","ama":"Browning TD, Vishe P. Rational curves on smooth hypersurfaces of low degree. <i>Geometric Methods in Algebra and Number Theory</i>. 2017;11(7):1657-1675. doi:<a href=\"https://doi.org/10.2140/ant.2017.11.1657\">10.2140/ant.2017.11.1657</a>","mla":"Browning, Timothy D., and Pankaj Vishe. “Rational Curves on Smooth Hypersurfaces of Low Degree.” <i>Geometric Methods in Algebra and Number Theory</i>, vol. 11, no. 7,  Mathematical Sciences Publishers, 2017, pp. 1657–75, doi:<a href=\"https://doi.org/10.2140/ant.2017.11.1657\">10.2140/ant.2017.11.1657</a>.","apa":"Browning, T. D., &#38; Vishe, P. (2017). Rational curves on smooth hypersurfaces of low degree. <i>Geometric Methods in Algebra and Number Theory</i>.  Mathematical Sciences Publishers. <a href=\"https://doi.org/10.2140/ant.2017.11.1657\">https://doi.org/10.2140/ant.2017.11.1657</a>","ista":"Browning TD, Vishe P. 2017. Rational curves on smooth hypersurfaces of low degree. Geometric Methods in Algebra and Number Theory. 11(7), 1657–1675.","chicago":"Browning, Timothy D, and Pankaj Vishe. “Rational Curves on Smooth Hypersurfaces of Low Degree.” <i>Geometric Methods in Algebra and Number Theory</i>.  Mathematical Sciences Publishers, 2017. <a href=\"https://doi.org/10.2140/ant.2017.11.1657\">https://doi.org/10.2140/ant.2017.11.1657</a>."},"issue":"7","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","month":"09","arxiv":1,"abstract":[{"lang":"eng","text":"We establish the dimension and irreducibility of the moduli space of rational curves (of fixed degree) on arbitrary smooth hypersurfaces of sufficiently low degree. A spreading out argument reduces the problem to hypersurfaces defined over finite fields of large cardinality, which can then be tackled using a function field version of the Hardy-Littlewood circle method, in which particular care is taken to ensure uniformity in the size of the underlying finite field."}],"intvolume":"        11","publication_status":"published","publication_identifier":{"eissn":["1944-7833"]},"day":"07","author":[{"full_name":"Browning, Timothy D","id":"35827D50-F248-11E8-B48F-1D18A9856A87","last_name":"Browning","orcid":"0000-0002-8314-0177","first_name":"Timothy D"},{"first_name":"Pankaj","last_name":"Vishe","full_name":"Vishe, Pankaj"}],"oa_version":"Preprint","title":"Rational curves on smooth hypersurfaces of low degree","volume":11,"date_created":"2018-12-11T11:45:30Z","article_type":"original"},{"article_type":"original","date_created":"2018-12-11T11:45:31Z","volume":19,"oa_version":"Preprint","title":"Forms in many variables and differing degrees","author":[{"full_name":"Browning, Timothy D","id":"35827D50-F248-11E8-B48F-1D18A9856A87","last_name":"Browning","first_name":"Timothy D","orcid":"0000-0002-8314-0177"},{"first_name":"Roger","last_name":"Heath Brown","full_name":"Heath Brown, Roger"}],"day":"26","publication_status":"published","abstract":[{"lang":"eng","text":"We generalise Birch's seminal work on forms in many variables to handle a system of forms in which the degrees need not all be the same. This allows us to prove the Hasse principle, weak approximation, and the Manin-Peyre conjecture for a smooth and geometrically integral variety X Pm, provided only that its dimension is large enough in terms of its degree."}],"intvolume":"        19","month":"01","arxiv":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","issue":"2","citation":{"ama":"Browning TD, Heath Brown R. Forms in many variables and differing degrees. <i>Journal of the European Mathematical Society</i>. 2017;19(2):357-394. doi:<a href=\"https://doi.org/10.4171/JEMS/668\">10.4171/JEMS/668</a>","short":"T.D. Browning, R. Heath Brown, Journal of the European Mathematical Society 19 (2017) 357–394.","ieee":"T. D. Browning and R. Heath Brown, “Forms in many variables and differing degrees,” <i>Journal of the European Mathematical Society</i>, vol. 19, no. 2. European Mathematical Society Publishing House, pp. 357–394, 2017.","chicago":"Browning, Timothy D, and Roger Heath Brown. “Forms in Many Variables and Differing Degrees.” <i>Journal of the European Mathematical Society</i>. European Mathematical Society Publishing House, 2017. <a href=\"https://doi.org/10.4171/JEMS/668\">https://doi.org/10.4171/JEMS/668</a>.","ista":"Browning TD, Heath Brown R. 2017. Forms in many variables and differing degrees. Journal of the European Mathematical Society. 19(2), 357–394.","mla":"Browning, Timothy D., and Roger Heath Brown. “Forms in Many Variables and Differing Degrees.” <i>Journal of the European Mathematical Society</i>, vol. 19, no. 2, European Mathematical Society Publishing House, 2017, pp. 357–94, doi:<a href=\"https://doi.org/10.4171/JEMS/668\">10.4171/JEMS/668</a>.","apa":"Browning, T. D., &#38; Heath Brown, R. (2017). Forms in many variables and differing degrees. <i>Journal of the European Mathematical Society</i>. European Mathematical Society Publishing House. <a href=\"https://doi.org/10.4171/JEMS/668\">https://doi.org/10.4171/JEMS/668</a>"},"language":[{"iso":"eng"}],"oa":1,"type":"journal_article","date_updated":"2024-03-05T11:47:15Z","_id":"266","publisher":"European Mathematical Society Publishing House","doi":"10.4171/JEMS/668","article_processing_charge":"No","quality_controlled":"1","main_file_link":[{"url":"https://arxiv.org/abs/1403.5937","open_access":"1"}],"page":"357 - 394","publist_id":"7636","external_id":{"arxiv":["1403.5937"]},"year":"2017","date_published":"2017-01-26T00:00:00Z","acknowledgement":"While working on this paper the first author was supported by ERC grant 306457.","status":"public","publication":"Journal of the European Mathematical Society","extern":"1"},{"page":"818 - 839","quality_controlled":"1","main_file_link":[{"url":"https://arxiv.org/abs/1701.00525","open_access":"1"}],"publisher":"Cambridge University Press","article_processing_charge":"No","doi":"10.1112/S0025579317000195","type":"journal_article","_id":"267","date_updated":"2024-03-05T11:49:27Z","status":"public","publication":"Mathematika","extern":"1","date_published":"2017-11-29T00:00:00Z","acknowledgement":"While working on this paper the author was supported by ERC grant 306457.","external_id":{"arxiv":["1701.00525"]},"year":"2017","publist_id":"7635","abstract":[{"lang":"eng","text":"Building on recent work of Bhargava, Elkies and Schnidman and of Kriz and Li, we produce infinitely many smooth cubic surfaces defined over the field of rational numbers that contain rational points."}],"intvolume":"        63","publication_identifier":{"issn":["0025-5793"]},"publication_status":"published","oa_version":"Preprint","title":"Many cubic surfaces contain rational points","day":"29","author":[{"orcid":"0000-0002-8314-0177","first_name":"Timothy D","id":"35827D50-F248-11E8-B48F-1D18A9856A87","full_name":"Browning, Timothy D","last_name":"Browning"}],"date_created":"2018-12-11T11:45:31Z","article_type":"original","volume":63,"language":[{"iso":"eng"}],"oa":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"chicago":"Browning, Timothy D. “Many Cubic Surfaces Contain Rational Points.” <i>Mathematika</i>. Cambridge University Press, 2017. <a href=\"https://doi.org/10.1112/S0025579317000195\">https://doi.org/10.1112/S0025579317000195</a>.","ista":"Browning TD. 2017. Many cubic surfaces contain rational points. Mathematika. 63(3), 818–839.","mla":"Browning, Timothy D. “Many Cubic Surfaces Contain Rational Points.” <i>Mathematika</i>, vol. 63, no. 3, Cambridge University Press, 2017, pp. 818–39, doi:<a href=\"https://doi.org/10.1112/S0025579317000195\">10.1112/S0025579317000195</a>.","apa":"Browning, T. D. (2017). Many cubic surfaces contain rational points. <i>Mathematika</i>. Cambridge University Press. <a href=\"https://doi.org/10.1112/S0025579317000195\">https://doi.org/10.1112/S0025579317000195</a>","ama":"Browning TD. Many cubic surfaces contain rational points. <i>Mathematika</i>. 2017;63(3):818-839. doi:<a href=\"https://doi.org/10.1112/S0025579317000195\">10.1112/S0025579317000195</a>","short":"T.D. Browning, Mathematika 63 (2017) 818–839.","ieee":"T. D. Browning, “Many cubic surfaces contain rational points,” <i>Mathematika</i>, vol. 63, no. 3. Cambridge University Press, pp. 818–839, 2017."},"issue":"3","arxiv":1,"month":"11"}]
