[{"external_id":{"arxiv":["1907.01415"]},"publication":"Frontiers in Astronomy and Space Sciences","publication_identifier":{"eissn":["2296-987X"]},"status":"public","language":[{"iso":"eng"}],"doi":"10.3389/fspas.2019.00046","intvolume":"         6","title":"Revisiting the impact of stellar magnetic activity on the detectability of solar-like oscillations by Kepler","quality_controlled":"1","main_file_link":[{"url":"https://arxiv.org/abs/1907.01415","open_access":"1"}],"oa":1,"article_processing_charge":"No","day":"10","type":"journal_article","extern":"1","keyword":["Astronomy and Astrophysics"],"article_type":"original","volume":6,"arxiv":1,"oa_version":"Preprint","article_number":"46","date_published":"2019-07-10T00:00:00Z","_id":"11613","month":"07","scopus_import":"1","date_updated":"2022-08-22T07:29:55Z","abstract":[{"lang":"eng","text":"Over 2,000 stars were observed for 1 month with a high enough cadence in order to look for acoustic modes during the survey phase of the Kepler mission. Solar-like oscillations have been detected in about 540 stars. The question of why no oscillations were detected in the remaining stars is still open. Previous works explained the non-detection of modes with the high level of magnetic activity of the stars. However, the sample of stars studied contained some classical pulsators and red giants that could have biased the results. In this work, we revisit this analysis on a cleaner sample of main-sequence solar-like stars that consists of 1,014 stars. First we compute the predicted amplitude of the modes of that sample and for the stars with detected oscillation and compare it to the noise at high frequency in the power spectrum. We find that the stars with detected modes have an amplitude to noise ratio larger than 0.94. We measure reliable rotation periods and the associated photometric magnetic index for 684 stars out of the full sample and in particular for 323 stars where the amplitude of the modes is predicted to be high enough to be detected. We find that among these 323 stars 32% of them have a level of magnetic activity larger than the Sun during its maximum activity, explaining the non-detection of acoustic modes. Interestingly, magnetic activity cannot be the primary reason responsible for the absence of detectable modes in the remaining 68% of the stars without acoustic modes detected and with reliable rotation periods. Thus, we investigate metallicity, inclination angle of the rotation axis, and binarity as possible causes of low mode amplitudes. Using spectroscopic observations for a subsample, we find that a low metallicity could be the reason for suppressed modes. No clear correlation with binarity nor inclination is found. We also derive the lower limit for our photometric activity index (of 20–30 ppm) below which rotation and magnetic activity are not detected. Finally, with our analysis we conclude that stars with a photometric activity index larger than 2,000 ppm have 98.3% probability of not having oscillations detected."}],"citation":{"mla":"Mathur, Savita, et al. “Revisiting the Impact of Stellar Magnetic Activity on the Detectability of Solar-like Oscillations by Kepler.” <i>Frontiers in Astronomy and Space Sciences</i>, vol. 6, 46, Frontiers Media, 2019, doi:<a href=\"https://doi.org/10.3389/fspas.2019.00046\">10.3389/fspas.2019.00046</a>.","apa":"Mathur, S., García, R. A., Bugnet, L. A., Santos, Â. R. G., Santiago, N., &#38; Beck, P. G. (2019). Revisiting the impact of stellar magnetic activity on the detectability of solar-like oscillations by Kepler. <i>Frontiers in Astronomy and Space Sciences</i>. Frontiers Media. <a href=\"https://doi.org/10.3389/fspas.2019.00046\">https://doi.org/10.3389/fspas.2019.00046</a>","ama":"Mathur S, García RA, Bugnet LA, Santos ÂRG, Santiago N, Beck PG. Revisiting the impact of stellar magnetic activity on the detectability of solar-like oscillations by Kepler. <i>Frontiers in Astronomy and Space Sciences</i>. 2019;6. doi:<a href=\"https://doi.org/10.3389/fspas.2019.00046\">10.3389/fspas.2019.00046</a>","short":"S. Mathur, R.A. García, L.A. Bugnet, Â.R.G. Santos, N. Santiago, P.G. Beck, Frontiers in Astronomy and Space Sciences 6 (2019).","chicago":"Mathur, Savita, Rafael A. García, Lisa Annabelle Bugnet, Ângela R.G. Santos, Netsha Santiago, and Paul G. Beck. “Revisiting the Impact of Stellar Magnetic Activity on the Detectability of Solar-like Oscillations by Kepler.” <i>Frontiers in Astronomy and Space Sciences</i>. Frontiers Media, 2019. <a href=\"https://doi.org/10.3389/fspas.2019.00046\">https://doi.org/10.3389/fspas.2019.00046</a>.","ista":"Mathur S, García RA, Bugnet LA, Santos ÂRG, Santiago N, Beck PG. 2019. Revisiting the impact of stellar magnetic activity on the detectability of solar-like oscillations by Kepler. Frontiers in Astronomy and Space Sciences. 6, 46.","ieee":"S. Mathur, R. A. García, L. A. Bugnet, Â. R. G. Santos, N. Santiago, and P. G. Beck, “Revisiting the impact of stellar magnetic activity on the detectability of solar-like oscillations by Kepler,” <i>Frontiers in Astronomy and Space Sciences</i>, vol. 6. Frontiers Media, 2019."},"acknowledgement":"This paper includes data collected by the Kepler mission. Funding for the Kepler mission is provided by the NASA Science Mission directorate. Some of the data presented in this paper were obtained from the Mikulski Archive for Space Telescopes (MAST). STScI is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS5-26555. Partly Based on observations obtained with the HERMES spectrograph on the Mercator Telescope, which was supported by the Research Foundation—Flanders (FWO), Belgium, the Research Council of KU Leuven, Belgium, the Fonds National de la Recherche Scientifique (F.R.S.-FNRS), Belgium, the Royal Observatory of Belgium, the Observatoire de Genève, Switzerland, and the Thüringer Landessternwarte Tautenburg, Germany. SM acknowledges support by the National Aeronautics and Space Administration under Grant NNX15AF13G, by the National Science Foundation grant AST-1411685, and the Ramon y Cajal fellowship number RYC-2015-17697. RG acknowledges the support from PLATO and GOLF CNES grants. ÂS acknowledges the support from National Aeronautics and Space Administration under Grant NNX17AF27G. PB acknowledges the support of the MINECO under the fellowship program Juan de la Cierva Incorporacion (IJCI-2015-26034).","publisher":"Frontiers Media","year":"2019","author":[{"full_name":"Mathur, Savita","last_name":"Mathur","first_name":"Savita"},{"full_name":"García, Rafael A.","first_name":"Rafael A.","last_name":"García"},{"first_name":"Lisa Annabelle","orcid":"0000-0003-0142-4000","last_name":"Bugnet","id":"d9edb345-f866-11ec-9b37-d119b5234501","full_name":"Bugnet, Lisa Annabelle"},{"full_name":"Santos, Ângela R.G.","last_name":"Santos","first_name":"Ângela R.G."},{"full_name":"Santiago, Netsha","last_name":"Santiago","first_name":"Netsha"},{"full_name":"Beck, Paul G.","last_name":"Beck","first_name":"Paul G."}],"date_created":"2022-07-18T14:00:36Z","publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87"},{"year":"2019","author":[{"id":"d9edb345-f866-11ec-9b37-d119b5234501","last_name":"Bugnet","first_name":"Lisa Annabelle","orcid":"0000-0003-0142-4000","full_name":"Bugnet, Lisa Annabelle"},{"first_name":"R. A.","last_name":"García","full_name":"García, R. A."},{"full_name":"Mathur, S.","first_name":"S.","last_name":"Mathur"},{"last_name":"Davies","first_name":"G. R.","full_name":"Davies, G. R."},{"full_name":"Hall, O. J.","first_name":"O. J.","last_name":"Hall"},{"last_name":"Lund","first_name":"M. N.","full_name":"Lund, M. N."},{"last_name":"Rendle","first_name":"B. M.","full_name":"Rendle, B. M."}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_status":"published","date_created":"2022-07-18T14:13:34Z","date_updated":"2022-08-22T07:32:51Z","scopus_import":"1","month":"04","date_published":"2019-04-19T00:00:00Z","_id":"11614","publisher":"EDP Science","acknowledgement":"We thank the enitre T’DA team for useful comments and discussions, in particular Andrew Tkachenko. We also acknowledge Marc Hon, Keaton Bell, and James Kuszlewicz for useful comments on the manuscript. L.B. and R.A.G. acknowledge the support from PLATO and GOLF CNES grants. S.M. acknowledges support by the Ramon y Cajal fellowship number RYC-2015-17697. O.J.H. and B.M.R. acknowledge the support of the UK Science and Technology Facilities Council (STFC). M.N.L. acknowledges the support of the ESA PRODEX programme (PEA 4000119301). Funding for the Stellar Astrophysics Centre is provided by the Danish National Research Foundation (Grant DNRF106).","citation":{"mla":"Bugnet, Lisa Annabelle, et al. “FliPerClass: In Search of Solar-like Pulsators among TESS Targets.” <i>Astronomy &#38; Astrophysics</i>, vol. 624, A79, EDP Science, 2019, doi:<a href=\"https://doi.org/10.1051/0004-6361/201834780\">10.1051/0004-6361/201834780</a>.","apa":"Bugnet, L. A., García, R. A., Mathur, S., Davies, G. R., Hall, O. J., Lund, M. N., &#38; Rendle, B. M. (2019). FliPerClass: In search of solar-like pulsators among TESS targets. <i>Astronomy &#38; Astrophysics</i>. EDP Science. <a href=\"https://doi.org/10.1051/0004-6361/201834780\">https://doi.org/10.1051/0004-6361/201834780</a>","short":"L.A. Bugnet, R.A. García, S. Mathur, G.R. Davies, O.J. Hall, M.N. Lund, B.M. Rendle, Astronomy &#38; Astrophysics 624 (2019).","ama":"Bugnet LA, García RA, Mathur S, et al. FliPerClass: In search of solar-like pulsators among TESS targets. <i>Astronomy &#38; Astrophysics</i>. 2019;624. doi:<a href=\"https://doi.org/10.1051/0004-6361/201834780\">10.1051/0004-6361/201834780</a>","chicago":"Bugnet, Lisa Annabelle, R. A. García, S. Mathur, G. R. Davies, O. J. Hall, M. N. Lund, and B. M. Rendle. “FliPerClass: In Search of Solar-like Pulsators among TESS Targets.” <i>Astronomy &#38; Astrophysics</i>. EDP Science, 2019. <a href=\"https://doi.org/10.1051/0004-6361/201834780\">https://doi.org/10.1051/0004-6361/201834780</a>.","ista":"Bugnet LA, García RA, Mathur S, Davies GR, Hall OJ, Lund MN, Rendle BM. 2019. FliPerClass: In search of solar-like pulsators among TESS targets. Astronomy &#38; Astrophysics. 624, A79.","ieee":"L. A. Bugnet <i>et al.</i>, “FliPerClass: In search of solar-like pulsators among TESS targets,” <i>Astronomy &#38; Astrophysics</i>, vol. 624. EDP Science, 2019."},"abstract":[{"lang":"eng","text":"The NASA Transiting Exoplanet Survey Satellite (TESS) is about to provide full-frame images of almost the entire sky. The amount of stellar data to be analysed represents hundreds of millions stars, which is several orders of magnitude more than the number of stars observed by the Convection, Rotation and planetary Transits satellite (CoRoT), and NASA Kepler and K2 missions. We aim at automatically classifying the newly observed stars with near real-time algorithms to better guide the subsequent detailed studies. In this paper, we present a classification algorithm built to recognise solar-like pulsators among classical pulsators. This algorithm relies on the global amount of power contained in the power spectral density (PSD), also known as the flicker in spectral power density (FliPer). Because each type of pulsating star has a characteristic background or pulsation pattern, the shape of the PSD at different frequencies can be used to characterise the type of pulsating star. The FliPer classifier (FliPerClass) uses different FliPer parameters along with the effective temperature as input parameters to feed a ML algorithm in order to automatically classify the pulsating stars observed by TESS. Using noisy TESS-simulated data from the TESS Asteroseismic Science Consortium (TASC), we classify pulsators with a 98% accuracy. Among them, solar-like pulsating stars are recognised with a 99% accuracy, which is of great interest for a further seismic analysis of these stars, which are like our Sun. Similar results are obtained when we trained our classifier and applied it to 27-day subsets of real Kepler data. FliPerClass is part of the large TASC classification pipeline developed by the TESS Data for Asteroseismology (T’DA) classification working group."}],"article_processing_charge":"No","day":"19","type":"journal_article","volume":624,"article_number":"A79","oa_version":"Preprint","arxiv":1,"extern":"1","article_type":"original","keyword":["Space and Planetary Science","Astronomy and Astrophysics"],"publication_identifier":{"eissn":["1432-0746"],"issn":["0004-6361"]},"status":"public","publication":"Astronomy & Astrophysics","external_id":{"arxiv":["1902.09854"]},"quality_controlled":"1","title":"FliPerClass: In search of solar-like pulsators among TESS targets","oa":1,"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1902.09854"}],"doi":"10.1051/0004-6361/201834780","language":[{"iso":"eng"}],"intvolume":"       624"},{"external_id":{"arxiv":["1903.00115"]},"publication":"Monthly Notices of the Royal Astronomical Society","publication_identifier":{"issn":["0035-8711"],"eissn":["1365-2966"]},"status":"public","intvolume":"       485","language":[{"iso":"eng"}],"doi":"10.1093/mnras/stz622","page":"5616-5630","oa":1,"main_file_link":[{"url":"https://arxiv.org/abs/1903.00115","open_access":"1"}],"title":"A search for red giant solar-like oscillations in all Kepler data","quality_controlled":"1","day":"01","type":"journal_article","issue":"4","article_processing_charge":"No","keyword":["Space and Planetary Science","Astronomy and Astrophysics","asteroseismology","methods: data analysis","techniques: image processing","stars: oscillations","stars: statistics"],"article_type":"original","extern":"1","oa_version":"Preprint","arxiv":1,"volume":485,"_id":"11615","date_published":"2019-06-01T00:00:00Z","month":"06","date_updated":"2022-08-22T07:35:19Z","scopus_import":"1","abstract":[{"text":"The recently published Kepler mission Data Release 25 (DR25) reported on ∼197 000 targets observed during the mission. Despite this, no wide search for red giants showing solar-like oscillations have been made across all stars observed in Kepler’s long-cadence mode. In this work, we perform this task using custom apertures on the Kepler pixel files and detect oscillations in 21 914 stars, representing the largest sample of solar-like oscillating stars to date. We measure their frequency at maximum power, νmax, down to νmax≃4μHz and obtain log (g) estimates with a typical uncertainty below 0.05 dex, which is superior to typical measurements from spectroscopy. Additionally, the νmax distribution of our detections show good agreement with results from a simulated model of the Milky Way, with a ratio of observed to predicted stars of 0.992 for stars with 10<νmax<270μHz. Among our red giant detections, we find 909 to be dwarf/subgiant stars whose flux signal is polluted by a neighbouring giant as a result of using larger photometric apertures than those used by the NASA Kepler science processing pipeline. We further find that only 293 of the polluting giants are known Kepler targets. The remainder comprises over 600 newly identified oscillating red giants, with many expected to belong to the Galactic halo, serendipitously falling within the Kepler pixel files of targeted stars.","lang":"eng"}],"citation":{"ista":"Hon M, Stello D, García RA, Mathur S, Sharma S, Colman IL, Bugnet LA. 2019. A search for red giant solar-like oscillations in all Kepler data. Monthly Notices of the Royal Astronomical Society. 485(4), 5616–5630.","ieee":"M. Hon <i>et al.</i>, “A search for red giant solar-like oscillations in all Kepler data,” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 485, no. 4. Oxford University Press, pp. 5616–5630, 2019.","mla":"Hon, Marc, et al. “A Search for Red Giant Solar-like Oscillations in All Kepler Data.” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 485, no. 4, Oxford University Press, 2019, pp. 5616–30, doi:<a href=\"https://doi.org/10.1093/mnras/stz622\">10.1093/mnras/stz622</a>.","apa":"Hon, M., Stello, D., García, R. A., Mathur, S., Sharma, S., Colman, I. L., &#38; Bugnet, L. A. (2019). A search for red giant solar-like oscillations in all Kepler data. <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/mnras/stz622\">https://doi.org/10.1093/mnras/stz622</a>","ama":"Hon M, Stello D, García RA, et al. A search for red giant solar-like oscillations in all Kepler data. <i>Monthly Notices of the Royal Astronomical Society</i>. 2019;485(4):5616-5630. doi:<a href=\"https://doi.org/10.1093/mnras/stz622\">10.1093/mnras/stz622</a>","short":"M. Hon, D. Stello, R.A. García, S. Mathur, S. Sharma, I.L. Colman, L.A. Bugnet, Monthly Notices of the Royal Astronomical Society 485 (2019) 5616–5630.","chicago":"Hon, Marc, Dennis Stello, Rafael A García, Savita Mathur, Sanjib Sharma, Isabel L Colman, and Lisa Annabelle Bugnet. “A Search for Red Giant Solar-like Oscillations in All Kepler Data.” <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press, 2019. <a href=\"https://doi.org/10.1093/mnras/stz622\">https://doi.org/10.1093/mnras/stz622</a>."},"acknowledgement":"Funding for this Discovery mission is provided by NASA’s Science mission Directorate. We thank the entire Kepler team without whom this investigation would not be possible. DS is the recipient of an Australian Research Council Future Fellowship (project number FT1400147). RAG acknowledges the support from CNES. SM acknowledges support from NASA grant NNX15AF13G, NSF grant AST-1411685, and the Ramon y Cajal fellowship number RYC-2015-17697. ILC acknowledges scholarship support from the University of Sydney. We would like to thank Nicholas Barbara and Timothy Bedding for providing us with a list of variable stars that helped to validate a number of detections in this study. We also thank the group at the University of Sydney for fruitful discussions. Finally, we gratefully acknowledge the support of NVIDIA Corporation with the donation of the Titan Xp GPU used for this research.","publisher":"Oxford University Press","author":[{"full_name":"Hon, Marc","last_name":"Hon","first_name":"Marc"},{"full_name":"Stello, Dennis","first_name":"Dennis","last_name":"Stello"},{"full_name":"García, Rafael A","last_name":"García","first_name":"Rafael A"},{"full_name":"Mathur, Savita","first_name":"Savita","last_name":"Mathur"},{"last_name":"Sharma","first_name":"Sanjib","full_name":"Sharma, Sanjib"},{"full_name":"Colman, Isabel L","last_name":"Colman","first_name":"Isabel L"},{"full_name":"Bugnet, Lisa Annabelle","id":"d9edb345-f866-11ec-9b37-d119b5234501","first_name":"Lisa Annabelle","last_name":"Bugnet","orcid":"0000-0003-0142-4000"}],"year":"2019","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2022-07-18T14:26:03Z","publication_status":"published"},{"publisher":"IOP Publishing","abstract":[{"text":"We present the discovery of HD 221416 b, the first transiting planet identified by the Transiting Exoplanet Survey Satellite (TESS) for which asteroseismology of the host star is possible. HD 221416 b (HIP 116158, TOI-197) is a bright (V = 8.2 mag), spectroscopically classified subgiant that oscillates with an average frequency of about 430 μHz and displays a clear signature of mixed modes. The oscillation amplitude confirms that the redder TESS bandpass compared to Kepler has a small effect on the oscillations, supporting the expected yield of thousands of solar-like oscillators with TESS 2 minute cadence observations. Asteroseismic modeling yields a robust determination of the host star radius (R⋆ = 2.943 ± 0.064 R⊙), mass (M⋆ = 1.212 ± 0.074 M⊙), and age (4.9 ± 1.1 Gyr), and demonstrates that it has just started ascending the red-giant branch. Combining asteroseismology with transit modeling and radial-velocity observations, we show that the planet is a \"hot Saturn\" (Rp = 9.17 ± 0.33 R⊕) with an orbital period of ∼14.3 days, irradiance of F = 343 ± 24 F⊕, and moderate mass (Mp = 60.5 ± 5.7 M⊕) and density (ρp = 0.431 ± 0.062 g cm−3). The properties of HD 221416 b show that the host-star metallicity–planet mass correlation found in sub-Saturns (4–8 R⊕) does not extend to larger radii, indicating that planets in the transition between sub-Saturns and Jupiters follow a relatively narrow range of densities. With a density measured to ∼15%, HD 221416 b is one of the best characterized Saturn-size planets to date, augmenting the small number of known transiting planets around evolved stars and demonstrating the power of TESS to characterize exoplanets and their host stars using asteroseismology.","lang":"eng"}],"citation":{"ieee":"D. Huber <i>et al.</i>, “A hot Saturn orbiting an oscillating late subgiant discovered by TESS,” <i>The Astronomical Journal</i>, vol. 157, no. 6. IOP Publishing, 2019.","ista":"Huber D et al. 2019. A hot Saturn orbiting an oscillating late subgiant discovered by TESS. The Astronomical Journal. 157(6), 245.","ama":"Huber D, Chaplin WJ, Chontos A, et al. A hot Saturn orbiting an oscillating late subgiant discovered by TESS. <i>The Astronomical Journal</i>. 2019;157(6). doi:<a href=\"https://doi.org/10.3847/1538-3881/ab1488\">10.3847/1538-3881/ab1488</a>","short":"D. Huber, W.J. Chaplin, A. Chontos, H. Kjeldsen, J. Christensen-Dalsgaard, T.R. Bedding, W. Ball, R. Brahm, N. Espinoza, T. Henning, A. Jordán, P. Sarkis, E. Knudstrup, S. Albrecht, F. Grundahl, M.F. Andersen, P.L. Pallé, I. Crossfield, B. Fulton, A.W. Howard, H.T. Isaacson, L.M. Weiss, R. Handberg, M.N. Lund, A.M. Serenelli, J. Rørsted Mosumgaard, A. Stokholm, A. Bieryla, L.A. Buchhave, D.W. Latham, S.N. Quinn, E. Gaidos, T. Hirano, G.R. Ricker, R.K. Vanderspek, S. Seager, J.M. Jenkins, J.N. Winn, H.M. Antia, T. Appourchaux, S. Basu, K.J. Bell, O. Benomar, A. Bonanno, D.L. Buzasi, T.L. Campante, Z. Çelik Orhan, E. Corsaro, M.S. Cunha, G.R. Davies, S. Deheuvels, S.K. Grunblatt, A. Hasanzadeh, M.P. Di Mauro, R. A. García, P. Gaulme, L. Girardi, J.A. Guzik, M. Hon, C. Jiang, T. Kallinger, S.D. Kawaler, J.S. Kuszlewicz, Y. Lebreton, T. Li, M. Lucas, M.S. Lundkvist, A.W. Mann, S. Mathis, S. Mathur, A. Mazumdar, T.S. Metcalfe, A. Miglio, M.J.P. F. G. Monteiro, B. Mosser, A. Noll, B. Nsamba, J.M. Joel Ong, S. Örtel, F. Pereira, P. Ranadive, C. Régulo, T.S. Rodrigues, I.W. Roxburgh, V.S. Aguirre, B. Smalley, M. Schofield, S.G. Sousa, K.G. Stassun, D. Stello, J. Tayar, T.R. White, K. Verma, M. Vrard, M. Yıldız, D. Baker, M. Bazot, C. Beichmann, C. Bergmann, L.A. Bugnet, B. Cale, R. Carlino, S.M. Cartwright, J.L. Christiansen, D.R. Ciardi, O. Creevey, J.A. Dittmann, J.-D.D. Nascimento, V.V. Eylen, G. Fürész, J. Gagné, P. Gao, K. Gazeas, F. Giddens, O.J. Hall, S. Hekker, M.J. Ireland, N. Latouf, D. LeBrun, A.M. Levine, W. Matzko, E. Natinsky, E. Page, P. Plavchan, M. Mansouri-Samani, S. McCauliff, S.E. Mullally, B. Orenstein, A.G. Soto, M. Paegert, J.L. van Saders, C. Schnaible, D.R. Soderblom, R. Szabó, A. Tanner, C.G. Tinney, J. Teske, A. Thomas, R. Trampedach, D. Wright, T.T. Yuan, F. Zohrabi, The Astronomical Journal 157 (2019).","chicago":"Huber, Daniel, William J. Chaplin, Ashley Chontos, Hans Kjeldsen, Jørgen Christensen-Dalsgaard, Timothy R. Bedding, Warrick Ball, et al. “A Hot Saturn Orbiting an Oscillating Late Subgiant Discovered by TESS.” <i>The Astronomical Journal</i>. IOP Publishing, 2019. <a href=\"https://doi.org/10.3847/1538-3881/ab1488\">https://doi.org/10.3847/1538-3881/ab1488</a>.","mla":"Huber, Daniel, et al. “A Hot Saturn Orbiting an Oscillating Late Subgiant Discovered by TESS.” <i>The Astronomical Journal</i>, vol. 157, no. 6, 245, IOP Publishing, 2019, doi:<a href=\"https://doi.org/10.3847/1538-3881/ab1488\">10.3847/1538-3881/ab1488</a>.","apa":"Huber, D., Chaplin, W. J., Chontos, A., Kjeldsen, H., Christensen-Dalsgaard, J., Bedding, T. R., … Zohrabi, F. (2019). A hot Saturn orbiting an oscillating late subgiant discovered by TESS. <i>The Astronomical Journal</i>. IOP Publishing. <a href=\"https://doi.org/10.3847/1538-3881/ab1488\">https://doi.org/10.3847/1538-3881/ab1488</a>"},"acknowledgement":"The authors wish to recognize and acknowledge the very significant cultural role and reverence that the summit of Maunakea has always had within the indigenous Hawai'ian community. We are most fortunate to have the opportunity to conduct observations from this mountain. We thank Andrei Tokovinin for helpful information on the Speckle observations obtained with SOAR. D.H. acknowledges support by the National Aeronautics and Space Administration through the TESS Guest Investigator Program (80NSSC18K1585) and by the National Science Foundation (AST-1717000). A.C. acknowledges support by the National Science Foundation under the Graduate Research Fellowship Program. W.J.C., W.H.B., A.M., O.J.H., and G.R.D. acknowledge support from the Science and Technology Facilities Council and UK Space Agency. H.K. and F.G. acknowledge support from the European Social Fund via the Lithuanian Science Council grant No. 09.3.3-LMT-K-712-01-0103. Funding for the Stellar Astrophysics Centre is provided by The Danish National Research Foundation (grant DNRF106). A.J. acknowledges support from FONDECYT project 1171208, CONICYT project BASAL AFB-170002, and by the Ministry for the Economy, Development, and Tourism's Programa Iniciativa Científica Milenio through grant IC 120009, awarded to the Millennium Institute of Astrophysics (MAS). R.B. acknowledges support from FONDECYT Post-doctoral Fellowship Project 3180246, and from the Millennium Institute of Astrophysics (MAS). A.M.S. is supported by grants ESP2017-82674-R (MINECO) and SGR2017-1131 (AGAUR). R.A.G. and L.B. acknowledge the support of the PLATO grant from the CNES. The research leading to the presented results has received funding from the European Research Council under the European Community's Seventh Framework Programme (FP72007-2013)ERC grant agreement No. 338251 (StellarAges). S.M. acknowledges support from the European Research Council through the SPIRE grant 647383. This work was also supported by FCT (Portugal) through national funds and by FEDER through COMPETE2020 by these grants: UID/FIS/04434/2013 and POCI-01-0145-FEDER-007672, PTDC/FIS-AST/30389/2017, and POCI-01-0145-FEDER-030389. T.L.C. acknowledges support from the European Union's Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No. 792848 (PULSATION). E.C. is funded by the European Union's Horizon 2020 research and innovation program under the Marie Sklodowska-Curie grant agreement No. 664931. V.S.A. acknowledges support from the Independent Research Fund Denmark (Research grant 7027-00096B). D.S. acknowledges support from the Australian Research Council. S.B. acknowledges NASA grant NNX16AI09G and NSF grant AST-1514676. T.R.W. acknowledges support from the Australian Research Council through grant DP150100250. A.M. acknowledges support from the ERC Consolidator Grant funding scheme (project ASTEROCHRONOMETRY, G.A. n. 772293). S.M. acknowledges support from the Ramon y Cajal fellowship number RYC-2015-17697. M.S.L. is supported by the Carlsberg Foundation (grant agreement No. CF17-0760). A.M. and P.R. acknowledge support from the HBCSE-NIUS programme. J.K.T. and J.T. acknowledge that support for this work was provided by NASA through Hubble Fellowship grants HST-HF2-51399.001 and HST-HF2-51424.001 awarded by the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., for NASA, under contract NAS5-26555. T.S.R. acknowledges financial support from Premiale 2015 MITiC (PI B. Garilli). This project has been supported by the NKFIH K-115709 grant and the Lendület Program of the Hungarian Academy of Sciences, project No. LP2018-7/2018.\r\n\r\nBased on observations made with the Hertzsprung SONG telescope operated on the Spanish Observatorio del Teide on the island of Tenerife by the Aarhus and Copenhagen Universities and by the Instituto de Astrofísica de Canarias. Funding for the TESS mission is provided by NASA's Science Mission directorate. We acknowledge the use of public TESS Alert data from pipelines at the TESS Science Office and at the TESS Science Processing Operations Center. This research has made use of the Exoplanet Follow-up Observation Program website, which is operated by the California Institute of Technology, under contract with the National Aeronautics and Space Administration under the Exoplanet Exploration Program. This paper includes data collected by the TESS mission, which are publicly available from the Mikulski Archive for Space Telescopes (MAST).\r\n\r\nSoftware: Astropy (Astropy Collaboration et al. 2018), Matplotlib (Hunter 2007), DIAMONDS (Corsaro & De Ridder 2014), isoclassify (Huber et al. 2017), EXOFASTv2 (Eastman 2017), ktransit (Barclay 2018).","month":"05","date_updated":"2022-08-22T07:38:34Z","scopus_import":"1","_id":"11616","date_published":"2019-05-30T00:00:00Z","date_created":"2022-07-18T14:29:07Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_status":"published","author":[{"full_name":"Huber, Daniel","first_name":"Daniel","last_name":"Huber"},{"last_name":"Chaplin","first_name":"William J.","full_name":"Chaplin, William J."},{"full_name":"Chontos, Ashley","last_name":"Chontos","first_name":"Ashley"},{"first_name":"Hans","last_name":"Kjeldsen","full_name":"Kjeldsen, Hans"},{"first_name":"Jørgen","last_name":"Christensen-Dalsgaard","full_name":"Christensen-Dalsgaard, Jørgen"},{"last_name":"Bedding","first_name":"Timothy R.","full_name":"Bedding, Timothy R."},{"first_name":"Warrick","last_name":"Ball","full_name":"Ball, Warrick"},{"full_name":"Brahm, Rafael","first_name":"Rafael","last_name":"Brahm"},{"full_name":"Espinoza, Nestor","last_name":"Espinoza","first_name":"Nestor"},{"full_name":"Henning, Thomas","first_name":"Thomas","last_name":"Henning"},{"full_name":"Jordán, Andrés","first_name":"Andrés","last_name":"Jordán"},{"full_name":"Sarkis, Paula","last_name":"Sarkis","first_name":"Paula"},{"first_name":"Emil","last_name":"Knudstrup","full_name":"Knudstrup, Emil"},{"full_name":"Albrecht, Simon","first_name":"Simon","last_name":"Albrecht"},{"full_name":"Grundahl, Frank","first_name":"Frank","last_name":"Grundahl"},{"last_name":"Andersen","first_name":"Mads Fredslund","full_name":"Andersen, Mads Fredslund"},{"full_name":"Pallé, Pere L.","first_name":"Pere L.","last_name":"Pallé"},{"full_name":"Crossfield, Ian","first_name":"Ian","last_name":"Crossfield"},{"full_name":"Fulton, Benjamin","last_name":"Fulton","first_name":"Benjamin"},{"first_name":"Andrew W.","last_name":"Howard","full_name":"Howard, Andrew W."},{"full_name":"Isaacson, Howard T.","last_name":"Isaacson","first_name":"Howard T."},{"full_name":"Weiss, Lauren M.","first_name":"Lauren M.","last_name":"Weiss"},{"last_name":"Handberg","first_name":"Rasmus","full_name":"Handberg, Rasmus"},{"full_name":"Lund, Mikkel N.","first_name":"Mikkel N.","last_name":"Lund"},{"full_name":"Serenelli, Aldo M.","last_name":"Serenelli","first_name":"Aldo M."},{"full_name":"Rørsted Mosumgaard, Jakob","first_name":"Jakob","last_name":"Rørsted Mosumgaard"},{"last_name":"Stokholm","first_name":"Amalie","full_name":"Stokholm, Amalie"},{"full_name":"Bieryla, Allyson","first_name":"Allyson","last_name":"Bieryla"},{"full_name":"Buchhave, Lars A.","first_name":"Lars A.","last_name":"Buchhave"},{"first_name":"David W.","last_name":"Latham","full_name":"Latham, David W."},{"first_name":"Samuel N.","last_name":"Quinn","full_name":"Quinn, Samuel N."},{"first_name":"Eric","last_name":"Gaidos","full_name":"Gaidos, Eric"},{"full_name":"Hirano, Teruyuki","first_name":"Teruyuki","last_name":"Hirano"},{"last_name":"Ricker","first_name":"George R.","full_name":"Ricker, George R."},{"first_name":"Roland K.","last_name":"Vanderspek","full_name":"Vanderspek, Roland K."},{"last_name":"Seager","first_name":"Sara","full_name":"Seager, Sara"},{"full_name":"Jenkins, Jon M.","last_name":"Jenkins","first_name":"Jon M."},{"last_name":"Winn","first_name":"Joshua N.","full_name":"Winn, Joshua N."},{"first_name":"H. 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G. Monteiro","first_name":"Mário J. P.","full_name":"F. G. Monteiro, Mário J. 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G.","full_name":"Tinney, C. G."},{"full_name":"Teske, Johanna","first_name":"Johanna","last_name":"Teske"},{"last_name":"Thomas","first_name":"Alexandra","full_name":"Thomas, Alexandra"},{"full_name":"Trampedach, Regner","last_name":"Trampedach","first_name":"Regner"},{"last_name":"Wright","first_name":"Duncan","full_name":"Wright, Duncan"},{"last_name":"Yuan","first_name":"Thomas T.","full_name":"Yuan, Thomas T."},{"first_name":"Farzaneh","last_name":"Zohrabi","full_name":"Zohrabi, Farzaneh"}],"year":"2019","oa":1,"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1901.01643"}],"title":"A hot Saturn orbiting an oscillating late subgiant discovered by TESS","quality_controlled":"1","intvolume":"       157","language":[{"iso":"eng"}],"doi":"10.3847/1538-3881/ab1488","status":"public","publication_identifier":{"issn":["0004-6256"]},"publication":"The Astronomical Journal","external_id":{"arxiv":["1901.01643"]},"oa_version":"Preprint","arxiv":1,"article_number":"245","volume":157,"keyword":["Space and Planetary Science","Astronomy and Astrophysics"],"article_type":"original","extern":"1","day":"30","type":"journal_article","issue":"6","article_processing_charge":"No"},{"year":"2019","author":[{"full_name":"Santos, A. R. G.","first_name":"A. R. G.","last_name":"Santos"},{"full_name":"García, R. A.","first_name":"R. A.","last_name":"García"},{"full_name":"Mathur, S.","last_name":"Mathur","first_name":"S."},{"full_name":"Bugnet, Lisa Annabelle","id":"d9edb345-f866-11ec-9b37-d119b5234501","orcid":"0000-0003-0142-4000","first_name":"Lisa Annabelle","last_name":"Bugnet"},{"full_name":"van Saders, J. L.","last_name":"van Saders","first_name":"J. L."},{"last_name":"Metcalfe","first_name":"T. S.","full_name":"Metcalfe, T. S."},{"full_name":"Simonian, G. V. A.","last_name":"Simonian","first_name":"G. V. A."},{"full_name":"Pinsonneault, M. H.","first_name":"M. H.","last_name":"Pinsonneault"}],"date_created":"2022-07-19T09:21:58Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_status":"published","scopus_import":"1","date_updated":"2022-08-22T08:10:38Z","month":"09","date_published":"2019-09-19T00:00:00Z","_id":"11623","publisher":"IOP Publishing","acknowledgement":"The authors thank Róbert Szabó Paul G. Beck, Katrien Kolenberg, and Isabel L. Colman for helping on the classification of stars. This paper includes data collected by the Kepler mission and obtained from the MAST data archive at the Space Telescope Science Institute (STScI). Funding for the Kepler mission is provided by the National Aeronautics and Space Administration (NASA) Science Mission Directorate. STScI is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5–26555. A.R.G.S. acknowledges the support from NASA under grant NNX17AF27G. R.A.G. and L.B. acknowledge the support from PLATO and GOLF CNES grants. S.M. acknowledges the support from the Ramon y Cajal fellowship number RYC-2015-17697. T.S.M. acknowledges support from a Visiting Fellowship at the Max Planck Institute for Solar System Research. This research has made use of the NASA Exoplanet Archive, which is operated by the California Institute of Technology, under contract with the National Aeronautics and Space Administration under the Exoplanet Exploration Program.\r\n\r\nSoftware: KADACS (García et al. 2011), NumPy (van der Walt et al. 2011), SciPy (Jones et al. 2001), Matplotlib (Hunter 2007).\r\n\r\nFacilities: MAST - , Kepler Eclipsing Binary Catalog - , Exoplanet Archive. -","citation":{"ieee":"A. R. G. Santos <i>et al.</i>, “Surface rotation and photometric activity for Kepler targets. I. M and K main-sequence stars,” <i>The Astrophysical Journal Supplement Series</i>, vol. 244, no. 1. IOP Publishing, 2019.","ista":"Santos ARG, García RA, Mathur S, Bugnet LA, van Saders JL, Metcalfe TS, Simonian GVA, Pinsonneault MH. 2019. Surface rotation and photometric activity for Kepler targets. I. M and K main-sequence stars. The Astrophysical Journal Supplement Series. 244(1), 21.","short":"A.R.G. Santos, R.A. García, S. Mathur, L.A. Bugnet, J.L. van Saders, T.S. Metcalfe, G.V.A. Simonian, M.H. Pinsonneault, The Astrophysical Journal Supplement Series 244 (2019).","ama":"Santos ARG, García RA, Mathur S, et al. Surface rotation and photometric activity for Kepler targets. I. M and K main-sequence stars. <i>The Astrophysical Journal Supplement Series</i>. 2019;244(1). doi:<a href=\"https://doi.org/10.3847/1538-4365/ab3b56\">10.3847/1538-4365/ab3b56</a>","chicago":"Santos, A. R. G., R. A. García, S. Mathur, Lisa Annabelle Bugnet, J. L. van Saders, T. S. Metcalfe, G. V. A. Simonian, and M. H. Pinsonneault. “Surface Rotation and Photometric Activity for Kepler Targets. I. M and K Main-Sequence Stars.” <i>The Astrophysical Journal Supplement Series</i>. IOP Publishing, 2019. <a href=\"https://doi.org/10.3847/1538-4365/ab3b56\">https://doi.org/10.3847/1538-4365/ab3b56</a>.","mla":"Santos, A. R. G., et al. “Surface Rotation and Photometric Activity for Kepler Targets. I. M and K Main-Sequence Stars.” <i>The Astrophysical Journal Supplement Series</i>, vol. 244, no. 1, 21, IOP Publishing, 2019, doi:<a href=\"https://doi.org/10.3847/1538-4365/ab3b56\">10.3847/1538-4365/ab3b56</a>.","apa":"Santos, A. R. G., García, R. A., Mathur, S., Bugnet, L. A., van Saders, J. L., Metcalfe, T. S., … Pinsonneault, M. H. (2019). Surface rotation and photometric activity for Kepler targets. I. M and K main-sequence stars. <i>The Astrophysical Journal Supplement Series</i>. IOP Publishing. <a href=\"https://doi.org/10.3847/1538-4365/ab3b56\">https://doi.org/10.3847/1538-4365/ab3b56</a>"},"abstract":[{"text":"Brightness variations due to dark spots on the stellar surface encode information about stellar surface rotation and magnetic activity. In this work, we analyze the Kepler long-cadence data of 26,521 main-sequence stars of spectral types M and K in order to measure their surface rotation and photometric activity level. Rotation-period estimates are obtained by the combination of a wavelet analysis and autocorrelation function of the light curves. Reliable rotation estimates are determined by comparing the results from the different rotation diagnostics and four data sets. We also measure the photometric activity proxy Sph using the amplitude of the flux variations on an appropriate timescale. We report rotation periods and photometric activity proxies for about 60% of the sample, including 4431 targets for which McQuillan et al. did not report a rotation period. For the common targets with rotation estimates in this study and in McQuillan et al., our rotation periods agree within 99%. In this work, we also identify potential polluters, such as misclassified red giants and classical pulsator candidates. Within the parameter range we study, there is a mild tendency for hotter stars to have shorter rotation periods. The photometric activity proxy spans a wider range of values with increasing effective temperature. The rotation period and photometric activity proxy are also related, with Sph being larger for fast rotators. Similar to McQuillan et al., we find a bimodal distribution of rotation periods.","lang":"eng"}],"issue":"1","article_processing_charge":"No","type":"journal_article","day":"19","volume":244,"article_number":"21","arxiv":1,"oa_version":"Preprint","extern":"1","article_type":"original","keyword":["Space and Planetary Science","Astronomy and Astrophysics","methods: data analysis","stars: activity","stars: low-mass","stars: rotation","starspots","techniques: photometric"],"publication_identifier":{"issn":["0067-0049"]},"status":"public","publication":"The Astrophysical Journal Supplement Series","external_id":{"arxiv":["1908.05222"]},"quality_controlled":"1","title":"Surface rotation and photometric activity for Kepler targets. I. M and K main-sequence stars","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1908.05222"}],"oa":1,"doi":"10.3847/1538-4365/ab3b56","language":[{"iso":"eng"}],"intvolume":"       244"},{"date_published":"2019-06-23T00:00:00Z","publication":"arXiv","external_id":{"arxiv":["1906.09609"]},"_id":"11627","date_updated":"2022-08-22T08:16:53Z","month":"06","status":"public","doi":"10.48550/arXiv.1906.09609","abstract":[{"lang":"eng","text":"For a solar-like star, the surface rotation evolves with time, allowing in principle to estimate the age of a star from its surface rotation period. Here we are interested in measuring surface rotation periods of solar-like stars observed by the NASA mission Kepler. Different methods have been developed to track rotation signals in Kepler photometric light curves: time-frequency analysis based on wavelet techniques, autocorrelation and composite spectrum. We use the learning abilities of random forest classifiers to take decisions during two crucial steps of the analysis. First, given some input parameters, we discriminate the considered Kepler targets between rotating MS stars, non-rotating MS stars, red giants, binaries and pulsators. We then use a second classifier only on the MS rotating targets to decide the best data analysis treatment."}],"citation":{"apa":"Breton, S. N., Bugnet, L. A., Santos, A. R. G., Saux, A. L., Mathur, S., Palle, P. L., &#38; Garcia, R. A. (n.d.). Determining surface rotation periods of solar-like stars observed by the Kepler mission using machine learning techniques. <i>arXiv</i>. <a href=\"https://doi.org/10.48550/arXiv.1906.09609\">https://doi.org/10.48550/arXiv.1906.09609</a>","mla":"Breton, S. N., et al. “Determining Surface Rotation Periods of Solar-like Stars Observed by the Kepler Mission Using Machine Learning Techniques.” <i>ArXiv</i>, 1906.09609, doi:<a href=\"https://doi.org/10.48550/arXiv.1906.09609\">10.48550/arXiv.1906.09609</a>.","chicago":"Breton, S. N., Lisa Annabelle Bugnet, A. R. G. Santos, A. Le Saux, S. Mathur, P. L. Palle, and R. A. Garcia. “Determining Surface Rotation Periods of Solar-like Stars Observed by the Kepler Mission Using Machine Learning Techniques.” <i>ArXiv</i>, n.d. <a href=\"https://doi.org/10.48550/arXiv.1906.09609\">https://doi.org/10.48550/arXiv.1906.09609</a>.","short":"S.N. Breton, L.A. Bugnet, A.R.G. Santos, A.L. Saux, S. Mathur, P.L. Palle, R.A. Garcia, ArXiv (n.d.).","ama":"Breton SN, Bugnet LA, Santos ARG, et al. Determining surface rotation periods of solar-like stars observed by the Kepler mission using machine learning techniques. <i>arXiv</i>. doi:<a href=\"https://doi.org/10.48550/arXiv.1906.09609\">10.48550/arXiv.1906.09609</a>","ista":"Breton SN, Bugnet LA, Santos ARG, Saux AL, Mathur S, Palle PL, Garcia RA. Determining surface rotation periods of solar-like stars observed by the Kepler mission using machine learning techniques. arXiv, 1906.09609.","ieee":"S. N. Breton <i>et al.</i>, “Determining surface rotation periods of solar-like stars observed by the Kepler mission using machine learning techniques,” <i>arXiv</i>. ."},"language":[{"iso":"eng"}],"title":"Determining surface rotation periods of solar-like stars observed by the Kepler mission using machine learning techniques","main_file_link":[{"url":"https://arxiv.org/abs/1906.09609","open_access":"1"}],"oa":1,"article_processing_charge":"No","year":"2019","type":"preprint","day":"23","author":[{"full_name":"Breton, S. N.","last_name":"Breton","first_name":"S. N."},{"full_name":"Bugnet, Lisa Annabelle","orcid":"0000-0003-0142-4000","first_name":"Lisa Annabelle","last_name":"Bugnet","id":"d9edb345-f866-11ec-9b37-d119b5234501"},{"first_name":"A. R. G.","last_name":"Santos","full_name":"Santos, A. R. G."},{"full_name":"Saux, A. Le","first_name":"A. Le","last_name":"Saux"},{"first_name":"S.","last_name":"Mathur","full_name":"Mathur, S."},{"last_name":"Palle","first_name":"P. L.","full_name":"Palle, P. L."},{"full_name":"Garcia, R. A.","first_name":"R. A.","last_name":"Garcia"}],"extern":"1","keyword":["asteroseismology","rotation","solar-like stars","kepler","machine learning","random forest"],"publication_status":"submitted","date_created":"2022-07-20T11:18:53Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_number":"1906.09609","arxiv":1,"oa_version":"Preprint"},{"language":[{"iso":"eng"}],"citation":{"chicago":"Saux, A. Le, Lisa Annabelle Bugnet, S. Mathur, S. N. Breton, and R. A. Garcia. “Automatic Classification of K2 Pulsating Stars Using Machine Learning Techniques.” <i>ArXiv</i>, n.d. <a href=\"https://doi.org/10.48550/arXiv.1906.09611\">https://doi.org/10.48550/arXiv.1906.09611</a>.","short":"A.L. Saux, L.A. Bugnet, S. Mathur, S.N. Breton, R.A. Garcia, ArXiv (n.d.).","ama":"Saux AL, Bugnet LA, Mathur S, Breton SN, Garcia RA. Automatic classification of K2 pulsating stars using machine learning techniques. <i>arXiv</i>. doi:<a href=\"https://doi.org/10.48550/arXiv.1906.09611\">10.48550/arXiv.1906.09611</a>","apa":"Saux, A. L., Bugnet, L. A., Mathur, S., Breton, S. N., &#38; Garcia, R. A. (n.d.). Automatic classification of K2 pulsating stars using machine learning techniques. <i>arXiv</i>. <a href=\"https://doi.org/10.48550/arXiv.1906.09611\">https://doi.org/10.48550/arXiv.1906.09611</a>","mla":"Saux, A. Le, et al. “Automatic Classification of K2 Pulsating Stars Using Machine Learning Techniques.” <i>ArXiv</i>, 1906.09611, doi:<a href=\"https://doi.org/10.48550/arXiv.1906.09611\">10.48550/arXiv.1906.09611</a>.","ieee":"A. L. Saux, L. A. Bugnet, S. Mathur, S. N. Breton, and R. A. Garcia, “Automatic classification of K2 pulsating stars using machine learning techniques,” <i>arXiv</i>. .","ista":"Saux AL, Bugnet LA, Mathur S, Breton SN, Garcia RA. Automatic classification of K2 pulsating stars using machine learning techniques. arXiv, 1906.09611."},"abstract":[{"lang":"eng","text":"The second mission of NASA’s Kepler satellite, K2, has collected hundreds of thousands of lightcurves for stars close to the ecliptic plane. This new sample could increase the number of known pulsating stars and then improve our understanding of those stars. For the moment only a few stars have been properly classified and published. In this work, we present a method to automaticly classify K2 pulsating stars using a Machine Learning technique called Random Forest. The objective is to sort out the stars in four classes: red giant (RG), main-sequence Solar-like stars (SL), classical pulsators (PULS) and Other. To do this we use the effective temperatures and the luminosities of the stars as well as the FliPer features, that measures the amount of power contained in the power spectral density. The classifier now retrieves the right classification for more than 80% of the stars."}],"doi":"10.48550/arXiv.1906.09611","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.1906.09611"}],"oa":1,"title":"Automatic classification of K2 pulsating stars using machine learning techniques","_id":"11630","external_id":{"arxiv":["1906.09611"]},"date_published":"2019-06-23T00:00:00Z","publication":"arXiv","status":"public","month":"06","date_updated":"2022-08-22T08:20:29Z","keyword":["asteroseismology - methods","data analysis - thecniques","machine learning - stars","oscillations"],"extern":"1","arxiv":1,"oa_version":"Preprint","article_number":"1906.09611","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2022-07-21T06:57:10Z","publication_status":"submitted","author":[{"last_name":"Saux","first_name":"A. Le","full_name":"Saux, A. Le"},{"full_name":"Bugnet, Lisa Annabelle","first_name":"Lisa Annabelle","orcid":"0000-0003-0142-4000","last_name":"Bugnet","id":"d9edb345-f866-11ec-9b37-d119b5234501"},{"first_name":"S.","last_name":"Mathur","full_name":"Mathur, S."},{"full_name":"Breton, S. N.","first_name":"S. N.","last_name":"Breton"},{"full_name":"Garcia, R. A.","first_name":"R. A.","last_name":"Garcia"}],"type":"preprint","day":"23","year":"2019","article_processing_charge":"No"},{"_id":"7782","publication":"bioRxiv","date_published":"2019-06-14T00:00:00Z","status":"public","month":"06","date_updated":"2021-01-12T08:15:30Z","citation":{"chicago":"Sulc, Jonathan, Ninon Mounier, Felix Günther, Thomas Winkler, Andrew R. Wood, Timothy M. Frayling, Iris M. Heid, Matthew Richard Robinson, and Zoltán Kutalik. “Maximum Likelihood Method Quantifies the Overall Contribution of Gene-Environment Interaction to Continuous Traits: An Application to Complex Traits in the UK Biobank.” <i>BioRxiv</i>. Cold Spring Harbor Laboratory, 2019.","ama":"Sulc J, Mounier N, Günther F, et al. Maximum likelihood method quantifies the overall contribution of gene-environment interaction to continuous traits: An application to complex traits in the UK Biobank. <i>bioRxiv</i>. 2019.","short":"J. Sulc, N. Mounier, F. Günther, T. Winkler, A.R. Wood, T.M. Frayling, I.M. Heid, M.R. Robinson, Z. Kutalik, BioRxiv (2019).","apa":"Sulc, J., Mounier, N., Günther, F., Winkler, T., Wood, A. R., Frayling, T. M., … Kutalik, Z. (2019). Maximum likelihood method quantifies the overall contribution of gene-environment interaction to continuous traits: An application to complex traits in the UK Biobank. <i>bioRxiv</i>. Cold Spring Harbor Laboratory.","mla":"Sulc, Jonathan, et al. “Maximum Likelihood Method Quantifies the Overall Contribution of Gene-Environment Interaction to Continuous Traits: An Application to Complex Traits in the UK Biobank.” <i>BioRxiv</i>, Cold Spring Harbor Laboratory, 2019.","ieee":"J. Sulc <i>et al.</i>, “Maximum likelihood method quantifies the overall contribution of gene-environment interaction to continuous traits: An application to complex traits in the UK Biobank,” <i>bioRxiv</i>. Cold Spring Harbor Laboratory, 2019.","ista":"Sulc J, Mounier N, Günther F, Winkler T, Wood AR, Frayling TM, Heid IM, Robinson MR, Kutalik Z. 2019. Maximum likelihood method quantifies the overall contribution of gene-environment interaction to continuous traits: An application to complex traits in the UK Biobank. bioRxiv, ."},"abstract":[{"lang":"eng","text":"As genome-wide association studies (GWAS) increased in size, numerous gene-environment interactions (GxE) have been discovered, many of which however explore only one environment at a time and may suffer from statistical artefacts leading to biased interaction estimates. Here we propose a maximum likelihood method to estimate the contribution of GxE to complex traits taking into account all interacting environmental variables at the same time, without the need to measure any. This is possible because GxE induces fluctuations in the conditional trait variance, the extent of which depends on the strength of GxE. The approach can be applied to continuous outcomes and for single SNPs or genetic risk scores (GRS). Extensive simulations demonstrated that our method yields unbiased interaction estimates and excellent confidence interval coverage. We also offer a strategy to distinguish specific GxE from general heteroscedasticity (scale effects). Applying our method to 32 complex traits in the UK Biobank reveals that for body mass index (BMI) the GRSxE explains an additional 1.9% variance on top of the 5.2% GRS contribution. However, this interaction is not specific to the GRS and holds for any variable similarly correlated with BMI. On the contrary, the GRSxE interaction effect for leg impedance Embedded Image is significantly (P < 10−56) larger than it would be expected for a similarly correlated variable Embedded Image. We showed that our method could robustly detect the global contribution of GxE to complex traits, which turned out to be substantial for certain obesity measures."}],"language":[{"iso":"eng"}],"page":"20","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1101/632380 "}],"oa":1,"publisher":"Cold Spring Harbor Laboratory","title":"Maximum likelihood method quantifies the overall contribution of gene-environment interaction to continuous traits: An application to complex traits in the UK Biobank","author":[{"full_name":"Sulc, Jonathan","first_name":"Jonathan","last_name":"Sulc"},{"full_name":"Mounier, Ninon","first_name":"Ninon","last_name":"Mounier"},{"full_name":"Günther, Felix","last_name":"Günther","first_name":"Felix"},{"first_name":"Thomas","last_name":"Winkler","full_name":"Winkler, Thomas"},{"last_name":"Wood","first_name":"Andrew R.","full_name":"Wood, Andrew R."},{"first_name":"Timothy M.","last_name":"Frayling","full_name":"Frayling, Timothy M."},{"full_name":"Heid, Iris M.","first_name":"Iris M.","last_name":"Heid"},{"last_name":"Robinson","first_name":"Matthew Richard","orcid":"0000-0001-8982-8813","id":"E5D42276-F5DA-11E9-8E24-6303E6697425","full_name":"Robinson, Matthew Richard"},{"first_name":"Zoltán","last_name":"Kutalik","full_name":"Kutalik, Zoltán"}],"day":"14","type":"preprint","article_processing_charge":"No","year":"2019","extern":"1","oa_version":"Preprint","publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2020-04-30T13:04:26Z"},{"type":"preprint","day":"16","author":[{"full_name":"Biniaz, Ahmad","first_name":"Ahmad","last_name":"Biniaz"},{"first_name":"Kshitij","last_name":"Jain","full_name":"Jain, Kshitij"},{"first_name":"Anna","last_name":"Lubiw","full_name":"Lubiw, Anna"},{"id":"45CFE238-F248-11E8-B48F-1D18A9856A87","last_name":"Masárová","first_name":"Zuzana","orcid":"0000-0002-6660-1322","full_name":"Masárová, Zuzana"},{"first_name":"Tillmann","last_name":"Miltzow","full_name":"Miltzow, Tillmann"},{"full_name":"Mondal, Debajyoti","last_name":"Mondal","first_name":"Debajyoti"},{"full_name":"Naredla, Anurag Murty","first_name":"Anurag Murty","last_name":"Naredla"},{"full_name":"Tkadlec, Josef","id":"3F24CCC8-F248-11E8-B48F-1D18A9856A87","first_name":"Josef","orcid":"0000-0002-1097-9684","last_name":"Tkadlec"},{"first_name":"Alexi","last_name":"Turcotte","full_name":"Turcotte, Alexi"}],"related_material":{"record":[{"id":"7944","relation":"dissertation_contains","status":"public"},{"id":"12833","relation":"later_version","status":"public"}]},"year":"2019","article_processing_charge":"No","department":[{"_id":"HeEd"},{"_id":"UlWa"},{"_id":"KrCh"}],"article_number":"1903.06981","oa_version":"Preprint","arxiv":1,"date_created":"2020-06-08T12:25:25Z","publication_status":"submitted","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"7950","publication":"arXiv","external_id":{"arxiv":["1903.06981"]},"date_published":"2019-03-16T00:00:00Z","status":"public","date_updated":"2024-01-04T12:42:08Z","month":"03","citation":{"short":"A. Biniaz, K. Jain, A. Lubiw, Z. Masárová, T. Miltzow, D. Mondal, A.M. Naredla, J. Tkadlec, A. Turcotte, ArXiv (n.d.).","ama":"Biniaz A, Jain K, Lubiw A, et al. Token swapping on trees. <i>arXiv</i>.","chicago":"Biniaz, Ahmad, Kshitij Jain, Anna Lubiw, Zuzana Masárová, Tillmann Miltzow, Debajyoti Mondal, Anurag Murty Naredla, Josef Tkadlec, and Alexi Turcotte. “Token Swapping on Trees.” <i>ArXiv</i>, n.d.","mla":"Biniaz, Ahmad, et al. “Token Swapping on Trees.” <i>ArXiv</i>, 1903.06981.","apa":"Biniaz, A., Jain, K., Lubiw, A., Masárová, Z., Miltzow, T., Mondal, D., … Turcotte, A. (n.d.). Token swapping on trees. <i>arXiv</i>.","ieee":"A. Biniaz <i>et al.</i>, “Token swapping on trees,” <i>arXiv</i>. .","ista":"Biniaz A, Jain K, Lubiw A, Masárová Z, Miltzow T, Mondal D, Naredla AM, Tkadlec J, Turcotte A. Token swapping on trees. arXiv, 1903.06981."},"abstract":[{"lang":"eng","text":"The input to the token swapping problem is a graph with vertices v1, v2, . . . , vn, and n tokens with labels 1,2, . . . , n, one on each vertex.  The goal is to get token i to vertex vi for all i= 1, . . . , n using a minimum number of swaps, where a swap exchanges the tokens on the endpoints of an edge.Token swapping on a tree, also known as “sorting with a transposition tree,” is not known to be in P nor NP-complete.  We present some partial results:\r\n1.  An optimum swap sequence may need to perform a swap on a leaf vertex that has the correct token (a “happy leaf”), disproving a conjecture of Vaughan.\r\n2.  Any algorithm that fixes happy leaves—as all known approximation algorithms for the problem do—has approximation factor at least 4/3.  Furthermore, the two best-known 2-approximation algorithms have approximation factor exactly 2.\r\n3.  A generalized problem—weighted coloured token swapping—is NP-complete on trees, but solvable in polynomial time on paths and stars.  In this version, tokens and  vertices  have  colours,  and  colours  have  weights.   The  goal  is  to  get  every token to a vertex of the same colour, and the cost of a swap is the sum of the weights of the two tokens involved."}],"language":[{"iso":"eng"}],"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1903.06981"}],"oa":1,"title":"Token swapping on trees"},{"language":[{"iso":"eng"}],"doi":"10.1523/JNEUROSCI.1059-18.2018","intvolume":"        39","file":[{"date_updated":"2020-10-02T09:33:28Z","creator":"dernst","content_type":"application/pdf","file_size":9455414,"date_created":"2020-10-02T09:33:28Z","file_id":"8596","relation":"main_file","access_level":"open_access","checksum":"8f6925eb4cd1e8747d8ea25929c68de6","file_name":"2019_JournNeuroscience_Trebuchet.pdf","success":1}],"title":"The Repo homeodomain transcription factor suppresses hematopoiesis in Drosophila and preserves the glial fate","quality_controlled":"1","page":"238-255","oa":1,"ddc":["570"],"external_id":{"isi":["000455189900006"],"pmid":["30504274"]},"publication":"Journal of Neuroscience","project":[{"name":"Investigating the role of transporters in invasive migration through junctions","_id":"2536F660-B435-11E9-9278-68D0E5697425","call_identifier":"FP7","grant_number":"334077"}],"status":"public","article_type":"original","volume":39,"oa_version":"Published Version","issue":"2","article_processing_charge":"No","isi":1,"day":"09","type":"journal_article","department":[{"_id":"DaSi"}],"file_date_updated":"2020-10-02T09:33:28Z","citation":{"apa":"Trébuchet, G., Cattenoz, P. B., Zsámboki, J., Mazaud, D., Siekhaus, D. E., Fanto, M., &#38; Giangrande, A. (2019). The Repo homeodomain transcription factor suppresses hematopoiesis in Drosophila and preserves the glial fate. <i>Journal of Neuroscience</i>. Society for Neuroscience. <a href=\"https://doi.org/10.1523/JNEUROSCI.1059-18.2018\">https://doi.org/10.1523/JNEUROSCI.1059-18.2018</a>","mla":"Trébuchet, Guillaume, et al. “The Repo Homeodomain Transcription Factor Suppresses Hematopoiesis in Drosophila and Preserves the Glial Fate.” <i>Journal of Neuroscience</i>, vol. 39, no. 2, Society for Neuroscience, 2019, pp. 238–55, doi:<a href=\"https://doi.org/10.1523/JNEUROSCI.1059-18.2018\">10.1523/JNEUROSCI.1059-18.2018</a>.","chicago":"Trébuchet, Guillaume, Pierre B Cattenoz, János Zsámboki, David Mazaud, Daria E Siekhaus, Manolis Fanto, and Angela Giangrande. “The Repo Homeodomain Transcription Factor Suppresses Hematopoiesis in Drosophila and Preserves the Glial Fate.” <i>Journal of Neuroscience</i>. Society for Neuroscience, 2019. <a href=\"https://doi.org/10.1523/JNEUROSCI.1059-18.2018\">https://doi.org/10.1523/JNEUROSCI.1059-18.2018</a>.","ama":"Trébuchet G, Cattenoz PB, Zsámboki J, et al. The Repo homeodomain transcription factor suppresses hematopoiesis in Drosophila and preserves the glial fate. <i>Journal of Neuroscience</i>. 2019;39(2):238-255. doi:<a href=\"https://doi.org/10.1523/JNEUROSCI.1059-18.2018\">10.1523/JNEUROSCI.1059-18.2018</a>","short":"G. Trébuchet, P.B. Cattenoz, J. Zsámboki, D. Mazaud, D.E. Siekhaus, M. Fanto, A. Giangrande, Journal of Neuroscience 39 (2019) 238–255.","ista":"Trébuchet G, Cattenoz PB, Zsámboki J, Mazaud D, Siekhaus DE, Fanto M, Giangrande A. 2019. The Repo homeodomain transcription factor suppresses hematopoiesis in Drosophila and preserves the glial fate. Journal of Neuroscience. 39(2), 238–255.","ieee":"G. Trébuchet <i>et al.</i>, “The Repo homeodomain transcription factor suppresses hematopoiesis in Drosophila and preserves the glial fate,” <i>Journal of Neuroscience</i>, vol. 39, no. 2. Society for Neuroscience, pp. 238–255, 2019."},"abstract":[{"text":"Despite their different origins, Drosophila glia and hemocytes are related cell populations that provide an immune function. Drosophila hemocytes patrol the body cavity and act as macrophages outside the nervous system whereas glia originate from the neuroepithelium and provide the scavenger population of the nervous system. Drosophila glia are hence the functional orthologs of vertebrate microglia, even though the latter are cells of immune origin that subsequently move into the brain during development. Interestingly, the Drosophila immune cells within (glia) and outside the nervous system (hemocytes) require the same transcription factor Glide/Gcm for their development. This raises the issue of how do glia specifically differentiate in the nervous system and hemocytes in the procephalic mesoderm. The Repo homeodomain transcription factor and pan-glial direct target of Glide/Gcm is known to ensure glial terminal differentiation. Here we show that Repo also takes center stage in the process that discriminates between glia and hemocytes. First, Repo expression is repressed in the hemocyte anlagen by mesoderm-specific factors. Second, Repo ectopic activation in the procephalic mesoderm is sufficient to repress the expression of hemocyte-specific genes. Third, the lack of Repo triggers the expression of hemocyte markers in glia. Thus, a complex network of tissue-specific cues biases the potential of Glide/Gcm. These data allow us to revise the concept of fate determinants and help us understand the bases of cell specification. Both sexes were analyzed.SIGNIFICANCE STATEMENTDistinct cell types often require the same pioneer transcription factor, raising the issue of how does one factor trigger different fates. In Drosophila, glia and hemocytes provide a scavenger activity within and outside the nervous system, respectively. While they both require the Glide/Gcm transcription factor, glia originate from the ectoderm, hemocytes from the mesoderm. Here we show that tissue-specific factors inhibit the gliogenic potential of Glide/Gcm in the mesoderm by repressing the expression of the homeodomain protein Repo, a major glial-specific target of Glide/Gcm. Repo expression in turn inhibits the expression of hemocyte-specific genes in the nervous system. These cell-specific networks secure the establishment of the glial fate only in the nervous system and allow cell diversification.","lang":"eng"}],"acknowledgement":"This work was supported by INSERM, CNRS, UDS, Ligue Régionale contre le Cancer, Hôpital de Strasbourg, Association pour la Recherche sur le Cancer (ARC) and Agence Nationale de la Recherche (ANR) grants. P.B.C. was funded by the ANR and by the ARSEP (Fondation pour l'Aide à la Recherche sur la Sclérose en Plaques), and G.T. by governmental and ARC fellowships. This work was also supported by grants from the Ataxia UK (2491) and the NC3R (NC/L000199/1) awarded to M.F. The Institut de Génétique et de Biologie Moléculaire et Cellulaire was also supported by a French state fund through the ANR labex. D.E.S. was funded by Marie Curie Grant CIG 334077/IRTIM. We thank B. Altenhein, K. Brückner, M. Crozatier, L. Waltzer, M. Logan, E. Kurant, R. Reuter, E. Kurucz, J.L Dimarcq, J. Hoffmann, C. Goodman, the DHSB, and the BDSC for reagents and flies. We also thank all of the laboratory members for comments on the manuscript; C. Diebold, C. Delaporte, M. Pezze, the fly, and imaging and antibody facilities for technical assistance; and D. Dembele for help with statistics. In addition, we thank Alison Brewer for help with Luciferase assays.","publisher":"Society for Neuroscience","ec_funded":1,"publist_id":"8048","date_published":"2019-01-09T00:00:00Z","_id":"8","month":"01","scopus_import":"1","date_updated":"2023-09-19T10:10:55Z","publication_status":"published","date_created":"2018-12-11T11:44:07Z","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","year":"2019","has_accepted_license":"1","author":[{"first_name":"Guillaume","last_name":"Trébuchet","full_name":"Trébuchet, Guillaume"},{"last_name":"Cattenoz","first_name":"Pierre B","full_name":"Cattenoz, Pierre B"},{"full_name":"Zsámboki, János","last_name":"Zsámboki","first_name":"János"},{"full_name":"Mazaud, David","last_name":"Mazaud","first_name":"David"},{"full_name":"Siekhaus, Daria E","id":"3D224B9E-F248-11E8-B48F-1D18A9856A87","first_name":"Daria E","last_name":"Siekhaus","orcid":"0000-0001-8323-8353"},{"full_name":"Fanto, Manolis","first_name":"Manolis","last_name":"Fanto"},{"last_name":"Giangrande","first_name":"Angela","full_name":"Giangrande, Angela"}],"pmid":1},{"department":[{"_id":"RoSe"}],"article_processing_charge":"Yes (via OA deal)","isi":1,"issue":"2","day":"01","type":"journal_article","volume":368,"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)","image":"/images/cc_by.png"},"license":"https://creativecommons.org/licenses/by/4.0/","oa_version":"Published Version","article_type":"original","project":[{"grant_number":"694227","call_identifier":"H2020","name":"Analysis of quantum many-body systems","_id":"25C6DC12-B435-11E9-9278-68D0E5697425"},{"call_identifier":"FWF","grant_number":"P27533_N27","name":"Structure of the Excitation Spectrum for Many-Body Quantum Systems","_id":"25C878CE-B435-11E9-9278-68D0E5697425"}],"status":"public","external_id":{"isi":["000467796800007"]},"publication":"Communications in Mathematical Physics","ddc":["530"],"quality_controlled":"1","title":"Bose–Einstein condensation in a dilute, trapped gas at positive temperature","oa":1,"page":"723-776","doi":"10.1007/s00220-018-3239-0","language":[{"iso":"eng"}],"file":[{"date_updated":"2020-07-14T12:48:07Z","creator":"dernst","file_id":"5688","date_created":"2018-12-17T10:34:06Z","content_type":"application/pdf","file_size":893902,"file_name":"2018_CommunMathPhys_Deuchert.pdf","checksum":"c7e9880b43ac726712c1365e9f2f73a6","access_level":"open_access","relation":"main_file"}],"intvolume":"       368","has_accepted_license":"1","year":"2019","author":[{"id":"4DA65CD0-F248-11E8-B48F-1D18A9856A87","first_name":"Andreas","orcid":"0000-0003-3146-6746","last_name":"Deuchert","full_name":"Deuchert, Andreas"},{"full_name":"Seiringer, Robert","id":"4AFD0470-F248-11E8-B48F-1D18A9856A87","first_name":"Robert","orcid":"0000-0002-6781-0521","last_name":"Seiringer"},{"full_name":"Yngvason, Jakob","last_name":"Yngvason","first_name":"Jakob"}],"publication_status":"published","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","date_created":"2018-12-11T11:44:31Z","scopus_import":"1","date_updated":"2023-08-24T14:27:51Z","month":"06","publist_id":"7974","date_published":"2019-06-01T00:00:00Z","ec_funded":1,"_id":"80","publisher":"Springer","citation":{"ista":"Deuchert A, Seiringer R, Yngvason J. 2019. Bose–Einstein condensation in a dilute, trapped gas at positive temperature. Communications in Mathematical Physics. 368(2), 723–776.","ieee":"A. Deuchert, R. Seiringer, and J. Yngvason, “Bose–Einstein condensation in a dilute, trapped gas at positive temperature,” <i>Communications in Mathematical Physics</i>, vol. 368, no. 2. Springer, pp. 723–776, 2019.","mla":"Deuchert, Andreas, et al. “Bose–Einstein Condensation in a Dilute, Trapped Gas at Positive Temperature.” <i>Communications in Mathematical Physics</i>, vol. 368, no. 2, Springer, 2019, pp. 723–76, doi:<a href=\"https://doi.org/10.1007/s00220-018-3239-0\">10.1007/s00220-018-3239-0</a>.","apa":"Deuchert, A., Seiringer, R., &#38; Yngvason, J. (2019). Bose–Einstein condensation in a dilute, trapped gas at positive temperature. <i>Communications in Mathematical Physics</i>. Springer. <a href=\"https://doi.org/10.1007/s00220-018-3239-0\">https://doi.org/10.1007/s00220-018-3239-0</a>","short":"A. Deuchert, R. Seiringer, J. Yngvason, Communications in Mathematical Physics 368 (2019) 723–776.","ama":"Deuchert A, Seiringer R, Yngvason J. Bose–Einstein condensation in a dilute, trapped gas at positive temperature. <i>Communications in Mathematical Physics</i>. 2019;368(2):723-776. doi:<a href=\"https://doi.org/10.1007/s00220-018-3239-0\">10.1007/s00220-018-3239-0</a>","chicago":"Deuchert, Andreas, Robert Seiringer, and Jakob Yngvason. “Bose–Einstein Condensation in a Dilute, Trapped Gas at Positive Temperature.” <i>Communications in Mathematical Physics</i>. Springer, 2019. <a href=\"https://doi.org/10.1007/s00220-018-3239-0\">https://doi.org/10.1007/s00220-018-3239-0</a>."},"file_date_updated":"2020-07-14T12:48:07Z","abstract":[{"text":"We consider an interacting, dilute Bose gas trapped in a harmonic potential at a positive temperature. The system is analyzed in a combination of a thermodynamic and a Gross–Pitaevskii (GP) limit where the trap frequency ω, the temperature T, and the particle number N are related by N∼ (T/ ω) 3→ ∞ while the scattering length is so small that the interaction energy per particle around the center of the trap is of the same order of magnitude as the spectral gap in the trap. We prove that the difference between the canonical free energy of the interacting gas and the one of the noninteracting system can be obtained by minimizing the GP energy functional. We also prove Bose–Einstein condensation in the following sense: The one-particle density matrix of any approximate minimizer of the canonical free energy functional is to leading order given by that of the noninteracting gas but with the free condensate wavefunction replaced by the GP minimizer.","lang":"eng"}]},{"publisher":"Public Library of Science","file_date_updated":"2020-07-14T12:48:08Z","citation":{"ieee":"C. B. Currin, P. N. Khoza, A. D. Antrobus, P. E. Latham, T. P. Vogels, and J. V. Raimondo, “Think: Theory for Africa,” <i>PLOS Computational Biology</i>, vol. 15, no. 7. Public Library of Science, 2019.","ista":"Currin CB, Khoza PN, Antrobus AD, Latham PE, Vogels TP, Raimondo JV. 2019. Think: Theory for Africa. PLOS Computational Biology. 15(7), e1007049.","chicago":"Currin, Christopher B., Phumlani N. Khoza, Alexander D. Antrobus, Peter E. Latham, Tim P Vogels, and Joseph V. Raimondo. “Think: Theory for Africa.” <i>PLOS Computational Biology</i>. Public Library of Science, 2019. <a href=\"https://doi.org/10.1371/journal.pcbi.1007049\">https://doi.org/10.1371/journal.pcbi.1007049</a>.","ama":"Currin CB, Khoza PN, Antrobus AD, Latham PE, Vogels TP, Raimondo JV. Think: Theory for Africa. <i>PLOS Computational Biology</i>. 2019;15(7). doi:<a href=\"https://doi.org/10.1371/journal.pcbi.1007049\">10.1371/journal.pcbi.1007049</a>","short":"C.B. Currin, P.N. Khoza, A.D. Antrobus, P.E. Latham, T.P. Vogels, J.V. Raimondo, PLOS Computational Biology 15 (2019).","apa":"Currin, C. B., Khoza, P. N., Antrobus, A. D., Latham, P. E., Vogels, T. P., &#38; Raimondo, J. V. (2019). Think: Theory for Africa. <i>PLOS Computational Biology</i>. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pcbi.1007049\">https://doi.org/10.1371/journal.pcbi.1007049</a>","mla":"Currin, Christopher B., et al. “Think: Theory for Africa.” <i>PLOS Computational Biology</i>, vol. 15, no. 7, e1007049, Public Library of Science, 2019, doi:<a href=\"https://doi.org/10.1371/journal.pcbi.1007049\">10.1371/journal.pcbi.1007049</a>."},"date_updated":"2021-01-12T08:16:31Z","month":"07","date_published":"2019-07-11T00:00:00Z","_id":"8013","date_created":"2020-06-25T12:50:39Z","publication_status":"published","user_id":"D865714E-FA4E-11E9-B85B-F5C5E5697425","pmid":1,"has_accepted_license":"1","year":"2019","author":[{"first_name":"Christopher B.","last_name":"Currin","full_name":"Currin, Christopher B."},{"first_name":"Phumlani N.","last_name":"Khoza","full_name":"Khoza, Phumlani N."},{"full_name":"Antrobus, Alexander D.","last_name":"Antrobus","first_name":"Alexander D."},{"last_name":"Latham","first_name":"Peter E.","full_name":"Latham, Peter E."},{"full_name":"Vogels, Tim P","last_name":"Vogels","first_name":"Tim P","orcid":"0000-0003-3295-6181","id":"CB6FF8D2-008F-11EA-8E08-2637E6697425"},{"last_name":"Raimondo","first_name":"Joseph V.","full_name":"Raimondo, Joseph V."}],"quality_controlled":"1","title":"Think: Theory for Africa","oa":1,"doi":"10.1371/journal.pcbi.1007049","language":[{"iso":"eng"}],"file":[{"date_updated":"2020-07-14T12:48:08Z","creator":"cziletti","file_size":773969,"content_type":"application/pdf","file_id":"8079","date_created":"2020-07-02T12:22:57Z","relation":"main_file","access_level":"open_access","checksum":"723bdfb6ee5c747cbbb32baf01d17fad","file_name":"2019_PlosCompBio_Currin.pdf"}],"intvolume":"        15","status":"public","publication_identifier":{"issn":["1553-7358"]},"external_id":{"pmid":["31295253"]},"publication":"PLOS Computational Biology","ddc":["570"],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)","image":"/images/cc_by.png"},"volume":15,"article_number":"e1007049","oa_version":"Published Version","extern":"1","article_type":"original","issue":"7","article_processing_charge":"No","type":"journal_article","day":"11"},{"language":[{"iso":"eng"}],"doi":"10.1016/j.neubiorev.2019.03.017","intvolume":"       101","file":[{"file_id":"8080","date_created":"2020-07-02T13:17:52Z","file_size":1754418,"content_type":"application/pdf","checksum":"7b972e3d6f7bb3122c8c5648f44e60ca","file_name":"2019_NeurosBiobehavRev_Manohar.pdf","relation":"main_file","access_level":"open_access","date_updated":"2020-07-14T12:48:08Z","creator":"cziletti"}],"title":"Neural mechanisms of attending to items in working memory","quality_controlled":"1","page":"1-12","oa":1,"main_file_link":[{"url":"https://doi.org/10.1101/233007 ","open_access":"1"}],"ddc":["570"],"external_id":{"pmid":["30922977"]},"publication":"Neuroscience and Biobehavioral Reviews","status":"public","publication_identifier":{"issn":["0149-7634"]},"extern":"1","article_type":"original","volume":101,"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)","image":"/images/cc_by.png"},"oa_version":"Published Version","article_processing_charge":"No","day":"01","type":"journal_article","abstract":[{"text":"Working memory, the ability to keep recently accessed information available for immediate manipulation, has been proposed to rely on two mechanisms that appear difficult to reconcile: self-sustained neural firing, or the opposite—activity-silent synaptic traces. Here we review and contrast models of these two mechanisms, and then show that both phenomena can co-exist within a unified system in which neurons hold information in both activity and synapses. Rapid plasticity in flexibly-coding neurons allows features to be bound together into objects, with an important emergent property being the focus of attention. One memory item is held by persistent activity in an attended or “focused” state, and is thus remembered better than other items. Other, previously attended items can remain in memory but in the background, encoded in activity-silent synaptic traces. This dual functional architecture provides a unified common mechanism accounting for a diversity of perplexing attention and memory effects that have been hitherto difficult to explain in a single theoretical framework.","lang":"eng"}],"citation":{"apa":"Manohar, S. G., Zokaei, N., Fallon, S. J., Vogels, T. P., &#38; Husain, M. (2019). Neural mechanisms of attending to items in working memory. <i>Neuroscience and Biobehavioral Reviews</i>. Elsevier . <a href=\"https://doi.org/10.1016/j.neubiorev.2019.03.017\">https://doi.org/10.1016/j.neubiorev.2019.03.017</a>","mla":"Manohar, Sanjay G., et al. “Neural Mechanisms of Attending to Items in Working Memory.” <i>Neuroscience and Biobehavioral Reviews</i>, vol. 101, Elsevier , 2019, pp. 1–12, doi:<a href=\"https://doi.org/10.1016/j.neubiorev.2019.03.017\">10.1016/j.neubiorev.2019.03.017</a>.","chicago":"Manohar, Sanjay G., Nahid Zokaei, Sean J. Fallon, Tim P Vogels, and Masud Husain. “Neural Mechanisms of Attending to Items in Working Memory.” <i>Neuroscience and Biobehavioral Reviews</i>. Elsevier , 2019. <a href=\"https://doi.org/10.1016/j.neubiorev.2019.03.017\">https://doi.org/10.1016/j.neubiorev.2019.03.017</a>.","ama":"Manohar SG, Zokaei N, Fallon SJ, Vogels TP, Husain M. Neural mechanisms of attending to items in working memory. <i>Neuroscience and Biobehavioral Reviews</i>. 2019;101:1-12. doi:<a href=\"https://doi.org/10.1016/j.neubiorev.2019.03.017\">10.1016/j.neubiorev.2019.03.017</a>","short":"S.G. Manohar, N. Zokaei, S.J. Fallon, T.P. Vogels, M. Husain, Neuroscience and Biobehavioral Reviews 101 (2019) 1–12.","ista":"Manohar SG, Zokaei N, Fallon SJ, Vogels TP, Husain M. 2019. Neural mechanisms of attending to items in working memory. Neuroscience and Biobehavioral Reviews. 101, 1–12.","ieee":"S. G. Manohar, N. Zokaei, S. J. Fallon, T. P. Vogels, and M. Husain, “Neural mechanisms of attending to items in working memory,” <i>Neuroscience and Biobehavioral Reviews</i>, vol. 101. Elsevier , pp. 1–12, 2019."},"file_date_updated":"2020-07-14T12:48:08Z","publisher":"Elsevier ","date_published":"2019-06-01T00:00:00Z","_id":"8014","month":"06","date_updated":"2021-01-12T08:16:31Z","publication_status":"published","date_created":"2020-06-25T12:52:13Z","user_id":"D865714E-FA4E-11E9-B85B-F5C5E5697425","year":"2019","has_accepted_license":"1","author":[{"first_name":"Sanjay G.","last_name":"Manohar","full_name":"Manohar, Sanjay G."},{"full_name":"Zokaei, Nahid","last_name":"Zokaei","first_name":"Nahid"},{"last_name":"Fallon","first_name":"Sean J.","full_name":"Fallon, Sean J."},{"full_name":"Vogels, Tim P","id":"CB6FF8D2-008F-11EA-8E08-2637E6697425","orcid":"0000-0003-3295-6181","first_name":"Tim P","last_name":"Vogels"},{"full_name":"Husain, Masud","last_name":"Husain","first_name":"Masud"}],"pmid":1},{"publisher":"Formal Power Series and Algebraic Combinatorics","abstract":[{"text":"We study edge asymptotics of poissonized Plancherel-type measures on skew Young diagrams (integer partitions). These measures can be seen as generalizations of those studied by Baik--Deift--Johansson and Baik--Rains in resolving Ulam's problem on longest increasing subsequences of random permutations and the last passage percolation (corner growth) discrete versions thereof. Moreover they interpolate between said measures and the uniform measure on partitions. In the new KPZ-like 1/3 exponent edge scaling limit with logarithmic corrections, we find new probability distributions generalizing the classical Tracy--Widom GUE, GOE and GSE distributions from the theory of random matrices.","lang":"eng"}],"citation":{"chicago":"Betea, Dan, Jérémie Bouttier, Peter Nejjar, and Mirjana Vuletíc. “New Edge Asymptotics of Skew Young Diagrams via Free Boundaries.” In <i>Proceedings on the 31st International Conference on Formal Power Series and Algebraic Combinatorics</i>. Formal Power Series and Algebraic Combinatorics, 2019.","ama":"Betea D, Bouttier J, Nejjar P, Vuletíc M. New edge asymptotics of skew Young diagrams via free boundaries. In: <i>Proceedings on the 31st International Conference on Formal Power Series and Algebraic Combinatorics</i>. Formal Power Series and Algebraic Combinatorics; 2019.","short":"D. Betea, J. Bouttier, P. Nejjar, M. Vuletíc, in:, Proceedings on the 31st International Conference on Formal Power Series and Algebraic Combinatorics, Formal Power Series and Algebraic Combinatorics, 2019.","apa":"Betea, D., Bouttier, J., Nejjar, P., &#38; Vuletíc, M. (2019). New edge asymptotics of skew Young diagrams via free boundaries. In <i>Proceedings on the 31st International Conference on Formal Power Series and Algebraic Combinatorics</i>. Ljubljana, Slovenia: Formal Power Series and Algebraic Combinatorics.","mla":"Betea, Dan, et al. “New Edge Asymptotics of Skew Young Diagrams via Free Boundaries.” <i>Proceedings on the 31st International Conference on Formal Power Series and Algebraic Combinatorics</i>, 34, Formal Power Series and Algebraic Combinatorics, 2019.","ieee":"D. Betea, J. Bouttier, P. Nejjar, and M. Vuletíc, “New edge asymptotics of skew Young diagrams via free boundaries,” in <i>Proceedings on the 31st International Conference on Formal Power Series and Algebraic Combinatorics</i>, Ljubljana, Slovenia, 2019.","ista":"Betea D, Bouttier J, Nejjar P, Vuletíc M. 2019. New edge asymptotics of skew Young diagrams via free boundaries. Proceedings on the 31st International Conference on Formal Power Series and Algebraic Combinatorics. FPSAC: International Conference on Formal Power Series and Algebraic Combinatorics, 34."},"acknowledgement":"D.B. is especially grateful to Patrik Ferrari for suggesting simplifications in Section 3 and\r\nto Alessandra Occelli for suggesting the name for the models of Section 2.\r\n","month":"07","scopus_import":"1","date_updated":"2021-01-12T08:17:18Z","_id":"8175","ec_funded":1,"date_published":"2019-07-01T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2020-07-26T22:01:04Z","publication_status":"published","author":[{"full_name":"Betea, Dan","last_name":"Betea","first_name":"Dan"},{"full_name":"Bouttier, Jérémie","last_name":"Bouttier","first_name":"Jérémie"},{"full_name":"Nejjar, Peter","last_name":"Nejjar","first_name":"Peter","id":"4BF426E2-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Vuletíc","first_name":"Mirjana","full_name":"Vuletíc, Mirjana"}],"year":"2019","oa":1,"main_file_link":[{"url":"https://arxiv.org/abs/1902.08750","open_access":"1"}],"title":"New edge asymptotics of skew Young diagrams via free boundaries","quality_controlled":"1","language":[{"iso":"eng"}],"status":"public","project":[{"call_identifier":"FP7","grant_number":"338804","_id":"258DCDE6-B435-11E9-9278-68D0E5697425","name":"Random matrices, universality and disordered quantum systems"},{"_id":"256E75B8-B435-11E9-9278-68D0E5697425","name":"Optimal Transport and Stochastic Dynamics","call_identifier":"H2020","grant_number":"716117"}],"publication":"Proceedings on the 31st International Conference on Formal Power Series and Algebraic Combinatorics","external_id":{"arxiv":["1902.08750"]},"arxiv":1,"oa_version":"Preprint","article_number":"34","department":[{"_id":"LaEr"}],"type":"conference","conference":{"start_date":"2019-07-01","location":"Ljubljana, Slovenia","name":"FPSAC: International Conference on Formal Power Series and Algebraic Combinatorics","end_date":"2019-07-05"},"day":"01","article_processing_charge":"No"},{"article_number":"1910.12628","oa_version":"Preprint","arxiv":1,"publication_status":"submitted","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2020-07-30T10:45:08Z","day":"28","type":"preprint","author":[{"full_name":"Avvakumov, Sergey","first_name":"Sergey","last_name":"Avvakumov","id":"3827DAC8-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Sergey","last_name":"Kudrya","id":"ecf01965-d252-11ea-95a5-8ada5f6c6a67","full_name":"Kudrya, Sergey"}],"related_material":{"record":[{"relation":"later_version","id":"11446","status":"public"},{"relation":"dissertation_contains","id":"8156","status":"public"}]},"article_processing_charge":"No","year":"2019","department":[{"_id":"UlWa"}],"abstract":[{"lang":"eng","text":"Suppose that $n\\neq p^k$ and $n\\neq 2p^k$ for all $k$ and all primes $p$. We prove that for any Hausdorff compactum $X$ with a free action of the symmetric group $\\mathfrak S_n$ there exists an $\\mathfrak S_n$-equivariant map $X \\to\r\n{\\mathbb R}^n$ whose image avoids the diagonal $\\{(x,x\\dots,x)\\in {\\mathbb R}^n|x\\in {\\mathbb R}\\}$.\r\n  Previously, the special cases of this statement for certain $X$ were usually proved using the equivartiant obstruction theory. Such calculations are difficult and may become infeasible past the first (primary) obstruction. We\r\ntake a different approach which allows us to prove the vanishing of all obstructions simultaneously. The essential step in the proof is classifying the possible degrees of $\\mathfrak S_n$-equivariant maps from the boundary\r\n$\\partial\\Delta^{n-1}$ of $(n-1)$-simplex to itself.  Existence of equivariant maps between spaces is important for many questions arising from discrete mathematics and geometry, such as Kneser's conjecture, the Square Peg conjecture, the Splitting Necklace problem, and the Topological Tverberg conjecture, etc. We demonstrate the utility of our result  applying it to one such question, a specific instance of envy-free division problem."}],"citation":{"ista":"Avvakumov S, Kudrya S. Vanishing of all equivariant obstructions and the mapping degree. arXiv, 1910.12628.","ieee":"S. Avvakumov and S. Kudrya, “Vanishing of all equivariant obstructions and the mapping degree,” <i>arXiv</i>. arXiv.","mla":"Avvakumov, Sergey, and Sergey Kudrya. “Vanishing of All Equivariant Obstructions and the Mapping Degree.” <i>ArXiv</i>, 1910.12628, arXiv.","apa":"Avvakumov, S., &#38; Kudrya, S. (n.d.). Vanishing of all equivariant obstructions and the mapping degree. <i>arXiv</i>. arXiv.","ama":"Avvakumov S, Kudrya S. Vanishing of all equivariant obstructions and the mapping degree. <i>arXiv</i>.","short":"S. Avvakumov, S. Kudrya, ArXiv (n.d.).","chicago":"Avvakumov, Sergey, and Sergey Kudrya. “Vanishing of All Equivariant Obstructions and the Mapping Degree.” <i>ArXiv</i>. arXiv, n.d."},"language":[{"iso":"eng"}],"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1910.12628"}],"oa":1,"publisher":"arXiv","title":"Vanishing of all equivariant obstructions and the mapping degree","_id":"8182","external_id":{"arxiv":["1910.12628"]},"publication":"arXiv","date_published":"2019-10-28T00:00:00Z","status":"public","date_updated":"2023-09-07T13:12:17Z","project":[{"grant_number":"P31312","call_identifier":"FWF","_id":"26611F5C-B435-11E9-9278-68D0E5697425","name":"Algorithms for Embeddings and Homotopy Theory"}],"month":"10"},{"department":[{"_id":"UlWa"}],"related_material":{"record":[{"status":"public","id":"8156","relation":"dissertation_contains"}]},"isi":1,"article_processing_charge":"No","year":"2019","day":"23","type":"preprint","author":[{"first_name":"Sergey","last_name":"Avvakumov","id":"3827DAC8-F248-11E8-B48F-1D18A9856A87","full_name":"Avvakumov, Sergey"},{"full_name":"Karasev, R.","last_name":"Karasev","first_name":"R."},{"last_name":"Skopenkov","first_name":"A.","full_name":"Skopenkov, A."}],"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","date_created":"2020-07-30T10:45:34Z","publication_status":"submitted","article_number":"1908.08731","oa_version":"Preprint","arxiv":1,"date_updated":"2023-09-08T11:20:02Z","project":[{"call_identifier":"FWF","grant_number":"P31312","name":"Algorithms for Embeddings and Homotopy Theory","_id":"26611F5C-B435-11E9-9278-68D0E5697425"}],"month":"08","status":"public","publication":"arXiv","date_published":"2019-08-23T00:00:00Z","external_id":{"arxiv":["1908.08731"],"isi":["000986519600004"]},"_id":"8184","title":"Stronger counterexamples to the topological Tverberg conjecture","publisher":"arXiv","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1908.08731"}],"oa":1,"acknowledgement":"We would like to thank F. Frick for helpful discussions","abstract":[{"lang":"eng","text":"Denote by ∆N the N-dimensional simplex. A map f : ∆N → Rd is an almost r-embedding if fσ1∩. . .∩fσr = ∅ whenever σ1, . . . , σr are pairwise disjoint faces. A counterexample to the topological Tverberg conjecture asserts that if r is not a prime power and d ≥ 2r + 1, then there is an almost r-embedding ∆(d+1)(r−1) → Rd. This was improved by Blagojevi´c–Frick–Ziegler using a simple construction of higher-dimensional counterexamples by taking k-fold join power of lower-dimensional ones. We improve this further (for d large compared to r): If r is not a prime power and N := (d+ 1)r−r l\r\nd + 2 r + 1 m−2, then there is an almost r-embedding ∆N → Rd. For the r-fold van Kampen–Flores conjecture we also produce counterexamples which are stronger than previously known. Our proof is based on generalizations of the Mabillard–Wagner theorem on construction of almost r-embeddings from equivariant maps, and of the Ozaydin theorem on existence of equivariant maps. "}],"language":[{"iso":"eng"}],"citation":{"ieee":"S. Avvakumov, R. Karasev, and A. Skopenkov, “Stronger counterexamples to the topological Tverberg conjecture,” <i>arXiv</i>. arXiv.","ista":"Avvakumov S, Karasev R, Skopenkov A. Stronger counterexamples to the topological Tverberg conjecture. arXiv, 1908.08731.","chicago":"Avvakumov, Sergey, R. Karasev, and A. Skopenkov. “Stronger Counterexamples to the Topological Tverberg Conjecture.” <i>ArXiv</i>. arXiv, n.d.","ama":"Avvakumov S, Karasev R, Skopenkov A. Stronger counterexamples to the topological Tverberg conjecture. <i>arXiv</i>.","short":"S. Avvakumov, R. Karasev, A. Skopenkov, ArXiv (n.d.).","apa":"Avvakumov, S., Karasev, R., &#38; Skopenkov, A. (n.d.). Stronger counterexamples to the topological Tverberg conjecture. <i>arXiv</i>. arXiv.","mla":"Avvakumov, Sergey, et al. “Stronger Counterexamples to the Topological Tverberg Conjecture.” <i>ArXiv</i>, 1908.08731, arXiv."}},{"article_number":"1907.11183","oa_version":"Preprint","arxiv":1,"publication_status":"submitted","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2020-07-30T10:45:51Z","day":"25","type":"preprint","author":[{"full_name":"Avvakumov, Sergey","last_name":"Avvakumov","first_name":"Sergey","id":"3827DAC8-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Karasev, Roman","last_name":"Karasev","first_name":"Roman"}],"related_material":{"record":[{"id":"8156","relation":"dissertation_contains","status":"public"}],"link":[{"relation":"later_version","url":"https://doi.org/10.1112/mtk.12059"}]},"year":"2019","article_processing_charge":"No","department":[{"_id":"UlWa"}],"doi":"10.48550/arXiv.1907.11183","citation":{"ama":"Avvakumov S, Karasev R. Envy-free division using mapping degree. <i>arXiv</i>. doi:<a href=\"https://doi.org/10.48550/arXiv.1907.11183\">10.48550/arXiv.1907.11183</a>","short":"S. Avvakumov, R. Karasev, ArXiv (n.d.).","chicago":"Avvakumov, Sergey, and Roman Karasev. “Envy-Free Division Using Mapping Degree.” <i>ArXiv</i>, n.d. <a href=\"https://doi.org/10.48550/arXiv.1907.11183\">https://doi.org/10.48550/arXiv.1907.11183</a>.","mla":"Avvakumov, Sergey, and Roman Karasev. “Envy-Free Division Using Mapping Degree.” <i>ArXiv</i>, 1907.11183, doi:<a href=\"https://doi.org/10.48550/arXiv.1907.11183\">10.48550/arXiv.1907.11183</a>.","apa":"Avvakumov, S., &#38; Karasev, R. (n.d.). Envy-free division using mapping degree. <i>arXiv</i>. <a href=\"https://doi.org/10.48550/arXiv.1907.11183\">https://doi.org/10.48550/arXiv.1907.11183</a>","ieee":"S. Avvakumov and R. Karasev, “Envy-free division using mapping degree,” <i>arXiv</i>. .","ista":"Avvakumov S, Karasev R. Envy-free division using mapping degree. arXiv, 1907.11183."},"language":[{"iso":"eng"}],"abstract":[{"text":"In this paper we study envy-free division problems. The classical approach to some of such problems, used by David Gale, reduces to considering continuous maps of a simplex to itself and finding sufficient conditions when this map hits the center of the simplex. The mere continuity is not sufficient for such a conclusion, the usual assumption (for example, in the Knaster--Kuratowski--Mazurkiewicz and the Gale theorem) is a certain boundary condition.\r\n  We follow Erel Segal-Halevi, Fr\\'ed\\'eric Meunier, and Shira Zerbib, and replace the boundary condition by another assumption, which has the economic meaning of possibility for a player to prefer an empty part in the segment\r\npartition problem. We solve the problem positively when $n$, the number of players that divide the segment, is a prime power, and we provide counterexamples for every $n$ which is not a prime power. We also provide counterexamples relevant to a wider class of fair or envy-free partition problems when $n$ is odd and not a prime power.","lang":"eng"}],"oa":1,"main_file_link":[{"url":"https://arxiv.org/abs/1907.11183","open_access":"1"}],"title":"Envy-free division using mapping degree","_id":"8185","date_published":"2019-07-25T00:00:00Z","external_id":{"arxiv":["1907.11183"]},"publication":"arXiv","status":"public","date_updated":"2023-09-07T13:12:17Z","project":[{"_id":"26611F5C-B435-11E9-9278-68D0E5697425","name":"Algorithms for Embeddings and Homotopy Theory","grant_number":"P31312","call_identifier":"FWF"}],"month":"07"},{"extern":"1","article_type":"letter_note","publication_status":"published","date_created":"2020-08-10T11:50:42Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":74,"oa_version":"Published Version","issue":"10","year":"2019","article_processing_charge":"No","day":"01","type":"journal_article","author":[{"last_name":"Ilieva","first_name":"Kristina M.","full_name":"Ilieva, Kristina M."},{"full_name":"Fazekas-Singer, Judit","orcid":"0000-0002-8777-3502","first_name":"Judit","last_name":"Fazekas-Singer","id":"36432834-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Heather J.","last_name":"Bax","full_name":"Bax, Heather J."},{"first_name":"Silvia","last_name":"Crescioli","full_name":"Crescioli, Silvia"},{"full_name":"Montero‐Morales, Laura","first_name":"Laura","last_name":"Montero‐Morales"},{"full_name":"Mele, Silvia","last_name":"Mele","first_name":"Silvia"},{"last_name":"Sow","first_name":"Heng Sheng","full_name":"Sow, Heng Sheng"},{"last_name":"Stavraka","first_name":"Chara","full_name":"Stavraka, Chara"},{"full_name":"Josephs, Debra H.","last_name":"Josephs","first_name":"Debra H."},{"full_name":"Spicer, James F.","last_name":"Spicer","first_name":"James F."},{"orcid":"0000-0003-4823-1505","last_name":"Steinkellner","first_name":"Herta","full_name":"Steinkellner, Herta"},{"last_name":"Jensen‐Jarolim","first_name":"Erika","orcid":"0000-0003-4019-5765","full_name":"Jensen‐Jarolim, Erika"},{"first_name":"Andrew N. J.","orcid":"0000-0001-8715-2901","last_name":"Tutt","full_name":"Tutt, Andrew N. J."},{"full_name":"Karagiannis, Sophia N.","orcid":"0000-0002-4100-7810","first_name":"Sophia N.","last_name":"Karagiannis"}],"doi":"10.1111/all.13818","language":[{"iso":"eng"}],"citation":{"ieee":"K. M. Ilieva <i>et al.</i>, “AllergoOncology: Expression platform development and functional profiling of an anti‐HER2 IgE antibody,” <i>Allergy</i>, vol. 74, no. 10. Wiley, pp. 1985–1989, 2019.","ista":"Ilieva KM, Singer J, Bax HJ, Crescioli S, Montero‐Morales L, Mele S, Sow HS, Stavraka C, Josephs DH, Spicer JF, Steinkellner H, Jensen‐Jarolim E, Tutt ANJ, Karagiannis SN. 2019. AllergoOncology: Expression platform development and functional profiling of an anti‐HER2 IgE antibody. Allergy. 74(10), 1985–1989.","chicago":"Ilieva, Kristina M., Judit Singer, Heather J. Bax, Silvia Crescioli, Laura Montero‐Morales, Silvia Mele, Heng Sheng Sow, et al. “AllergoOncology: Expression Platform Development and Functional Profiling of an Anti‐HER2 IgE Antibody.” <i>Allergy</i>. Wiley, 2019. <a href=\"https://doi.org/10.1111/all.13818\">https://doi.org/10.1111/all.13818</a>.","ama":"Ilieva KM, Singer J, Bax HJ, et al. AllergoOncology: Expression platform development and functional profiling of an anti‐HER2 IgE antibody. <i>Allergy</i>. 2019;74(10):1985-1989. doi:<a href=\"https://doi.org/10.1111/all.13818\">10.1111/all.13818</a>","short":"K.M. Ilieva, J. Singer, H.J. Bax, S. Crescioli, L. Montero‐Morales, S. Mele, H.S. Sow, C. Stavraka, D.H. Josephs, J.F. Spicer, H. Steinkellner, E. Jensen‐Jarolim, A.N.J. Tutt, S.N. Karagiannis, Allergy 74 (2019) 1985–1989.","apa":"Ilieva, K. M., Singer, J., Bax, H. J., Crescioli, S., Montero‐Morales, L., Mele, S., … Karagiannis, S. N. (2019). AllergoOncology: Expression platform development and functional profiling of an anti‐HER2 IgE antibody. <i>Allergy</i>. Wiley. <a href=\"https://doi.org/10.1111/all.13818\">https://doi.org/10.1111/all.13818</a>","mla":"Ilieva, Kristina M., et al. “AllergoOncology: Expression Platform Development and Functional Profiling of an Anti‐HER2 IgE Antibody.” <i>Allergy</i>, vol. 74, no. 10, Wiley, 2019, pp. 1985–89, doi:<a href=\"https://doi.org/10.1111/all.13818\">10.1111/all.13818</a>."},"intvolume":"        74","quality_controlled":"1","title":"AllergoOncology: Expression platform development and functional profiling of an anti‐HER2 IgE antibody","oa":1,"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1111/all.13818"}],"publisher":"Wiley","page":"1985-1989","publication":"Allergy","date_published":"2019-10-01T00:00:00Z","_id":"8227","date_updated":"2021-01-12T08:17:35Z","month":"10","publication_identifier":{"issn":["0105-4538","1398-9995"]},"status":"public"},{"date_published":"2019-07-29T00:00:00Z","_id":"8228","month":"07","date_updated":"2021-01-12T08:17:36Z","abstract":[{"lang":"eng","text":"Background: Atopics have a lower risk for malignancies, and IgE targeted to tumors is superior to IgG in fighting cancer. Whether IgE-mediated innate or adaptive immune surveillance can confer protection against tumors remains unclear.\r\nObjective: We aimed to investigate the effects of active and passive immunotherapy to the tumor-associated antigen HER-2 in three murine models differing in Epsilon-B-cell-receptor expression affecting the levels of expressed IgE.\r\nMethods: We compared the levels of several serum specific anti-HER-2 antibodies (IgE, IgG1, IgG2a, IgG2b, IgA) and the survival rates in low-IgE ΔM1M2 mice lacking the transmembrane/cytoplasmic domain of Epsilon-B-cell-receptors expressing reduced IgE levels, high-IgE KN1 mice expressing chimeric Epsilon-Gamma1-B-cell receptors with 4-6-fold elevated serum IgE levels, and wild type (WT) BALB/c. Prior engrafting mice with D2F2/E2 mammary tumors overexpressing HER-2, mice were vaccinated with HER-2 or vehicle control PBS using the Th2-adjuvant Al(OH)3 (active immunotherapy), or treated with the murine anti-HER-2 IgG1 antibody 4D5 (passive immunotherapy).\r\nResults: Overall, among the three strains of mice, HER-2 vaccination induced significantly higher levels of HER-2 specific IgE and IgG1 in high-IgE KN1, while low-IgE ΔM1M2 mice had higher IgG2a levels. HER-2 vaccination and passive immunotherapy prolonged the survival in tumor-grafted WT and low-IgE ΔM1M2 strains compared with treatment controls; active vaccination provided the highest benefit. Notably, untreated high-IgE KN1 mice displayed the longest survival of all strains, which could not be further extended by active or passive immunotherapy.\r\nConclusion: Active and passive immunotherapies prolong survival in wild type and low-IgE ΔM1M2 mice engrafted with mammary tumors. High-IgE KN1 mice have an innate survival benefit following tumor challenge."}],"citation":{"ieee":"J. Singer <i>et al.</i>, “AllergoOncology: High innate IgE levels are decisive for the survival of cancer-bearing mice,” <i>World Allergy Organization Journal</i>, vol. 12, no. 7. Elsevier, 2019.","ista":"Singer J, Achatz-Straussberger G, Bentley-Lukschal A, Singer J, Achatz G, Karagiannis SN, Jensen-Jarolim E. 2019. AllergoOncology: High innate IgE levels are decisive for the survival of cancer-bearing mice. World Allergy Organization Journal. 12(7), 100044.","short":"J. Singer, G. Achatz-Straussberger, A. Bentley-Lukschal, J. Singer, G. Achatz, S.N. Karagiannis, E. Jensen-Jarolim, World Allergy Organization Journal 12 (2019).","ama":"Singer J, Achatz-Straussberger G, Bentley-Lukschal A, et al. AllergoOncology: High innate IgE levels are decisive for the survival of cancer-bearing mice. <i>World Allergy Organization Journal</i>. 2019;12(7). doi:<a href=\"https://doi.org/10.1016/j.waojou.2019.100044\">10.1016/j.waojou.2019.100044</a>","chicago":"Singer, Josef, Gertrude Achatz-Straussberger, Anna Bentley-Lukschal, Judit Singer, Gernot Achatz, Sophia N. Karagiannis, and Erika Jensen-Jarolim. “AllergoOncology: High Innate IgE Levels Are Decisive for the Survival of Cancer-Bearing Mice.” <i>World Allergy Organization Journal</i>. Elsevier, 2019. <a href=\"https://doi.org/10.1016/j.waojou.2019.100044\">https://doi.org/10.1016/j.waojou.2019.100044</a>.","mla":"Singer, Josef, et al. “AllergoOncology: High Innate IgE Levels Are Decisive for the Survival of Cancer-Bearing Mice.” <i>World Allergy Organization Journal</i>, vol. 12, no. 7, 100044, Elsevier, 2019, doi:<a href=\"https://doi.org/10.1016/j.waojou.2019.100044\">10.1016/j.waojou.2019.100044</a>.","apa":"Singer, J., Achatz-Straussberger, G., Bentley-Lukschal, A., Singer, J., Achatz, G., Karagiannis, S. N., &#38; Jensen-Jarolim, E. (2019). AllergoOncology: High innate IgE levels are decisive for the survival of cancer-bearing mice. <i>World Allergy Organization Journal</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.waojou.2019.100044\">https://doi.org/10.1016/j.waojou.2019.100044</a>"},"publisher":"Elsevier","year":"2019","author":[{"full_name":"Singer, Josef","orcid":"0000-0002-8701-2412","first_name":"Josef","last_name":"Singer"},{"full_name":"Achatz-Straussberger, Gertrude","first_name":"Gertrude","last_name":"Achatz-Straussberger"},{"last_name":"Bentley-Lukschal","first_name":"Anna","full_name":"Bentley-Lukschal, Anna"},{"first_name":"Judit","last_name":"Fazekas-Singer","orcid":"0000-0002-8777-3502","id":"36432834-F248-11E8-B48F-1D18A9856A87","full_name":"Fazekas-Singer, Judit"},{"full_name":"Achatz, Gernot","last_name":"Achatz","first_name":"Gernot"},{"full_name":"Karagiannis, Sophia N.","first_name":"Sophia N.","last_name":"Karagiannis"},{"first_name":"Erika","last_name":"Jensen-Jarolim","full_name":"Jensen-Jarolim, Erika"}],"publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2020-08-10T11:50:54Z","publication":"World Allergy Organization Journal","status":"public","publication_identifier":{"issn":["1939-4551"]},"language":[{"iso":"eng"}],"doi":"10.1016/j.waojou.2019.100044","intvolume":"        12","title":"AllergoOncology: High innate IgE levels are decisive for the survival of cancer-bearing mice","quality_controlled":"1","main_file_link":[{"url":"https://doi.org/10.1016/j.waojou.2019.100044","open_access":"1"}],"oa":1,"article_processing_charge":"No","issue":"7","day":"29","type":"journal_article","extern":"1","article_type":"original","volume":12,"oa_version":"Published Version","article_number":"100044"},{"publication":"Nutrients","status":"public","publication_identifier":{"issn":["2072-6643"]},"doi":"10.3390/nu11102463","language":[{"iso":"eng"}],"intvolume":"        11","quality_controlled":"1","title":"Immune effects of the nitrated food allergen beta-lactoglobulin in an experimental food allergy model","oa":1,"main_file_link":[{"url":"https://doi.org/10.3390/nu11102463","open_access":"1"}],"issue":"10","article_processing_charge":"No","day":"15","type":"journal_article","extern":"1","article_type":"original","volume":11,"article_number":"2463","oa_version":"Published Version","date_published":"2019-10-15T00:00:00Z","_id":"8229","date_updated":"2021-01-12T08:17:36Z","month":"10","abstract":[{"lang":"eng","text":"Food proteins may get nitrated by various exogenous or endogenous mechanisms. As individuals might get recurrently exposed to nitrated proteins via daily diet, we aimed to investigate the effect of repeatedly ingested nitrated food proteins on the subsequent immune response in non-allergic and allergic mice using the milk allergen beta-lactoglobulin (BLG) as model food protein in a mouse model. Evaluating the presence of nitrated proteins in food, we could detect 3-nitrotyrosine (3-NT) in extracts of different foods and in stomach content extracts of non-allergic mice under physiological conditions. Chemically nitrated BLG (BLGn) exhibited enhanced susceptibility to degradation in simulated gastric fluid experiments compared to untreated BLG (BLGu). Gavage of BLGn to non-allergic animals increased interferon-γ and interleukin-10 release of stimulated spleen cells and led to the formation of BLG-specific serum IgA. Allergic mice receiving three oral gavages of BLGn had higher levels of mouse mast cell protease-1 (mMCP-1) compared to allergic mice receiving BLGu. Regardless of the preceding immune status, non-allergic or allergic, repeatedly ingested nitrated food proteins seem to considerably influence the subsequent immune response."}],"citation":{"chicago":"Ondracek, Anna S., Denise Heiden, Gertie J. Oostingh, Elisabeth Fuerst, Judit Singer, Cornelia Bergmayr, Johanna Rohrhofer, Erika Jensen-Jarolim, Albert Duschl, and Eva Untersmayr. “Immune Effects of the Nitrated Food Allergen Beta-Lactoglobulin in an Experimental Food Allergy Model.” <i>Nutrients</i>. MDPI, 2019. <a href=\"https://doi.org/10.3390/nu11102463\">https://doi.org/10.3390/nu11102463</a>.","ama":"Ondracek AS, Heiden D, Oostingh GJ, et al. Immune effects of the nitrated food allergen beta-lactoglobulin in an experimental food allergy model. <i>Nutrients</i>. 2019;11(10). doi:<a href=\"https://doi.org/10.3390/nu11102463\">10.3390/nu11102463</a>","short":"A.S. Ondracek, D. Heiden, G.J. Oostingh, E. Fuerst, J. Singer, C. Bergmayr, J. Rohrhofer, E. Jensen-Jarolim, A. Duschl, E. Untersmayr, Nutrients 11 (2019).","apa":"Ondracek, A. S., Heiden, D., Oostingh, G. J., Fuerst, E., Singer, J., Bergmayr, C., … Untersmayr, E. (2019). Immune effects of the nitrated food allergen beta-lactoglobulin in an experimental food allergy model. <i>Nutrients</i>. MDPI. <a href=\"https://doi.org/10.3390/nu11102463\">https://doi.org/10.3390/nu11102463</a>","mla":"Ondracek, Anna S., et al. “Immune Effects of the Nitrated Food Allergen Beta-Lactoglobulin in an Experimental Food Allergy Model.” <i>Nutrients</i>, vol. 11, no. 10, 2463, MDPI, 2019, doi:<a href=\"https://doi.org/10.3390/nu11102463\">10.3390/nu11102463</a>.","ieee":"A. S. Ondracek <i>et al.</i>, “Immune effects of the nitrated food allergen beta-lactoglobulin in an experimental food allergy model,” <i>Nutrients</i>, vol. 11, no. 10. MDPI, 2019.","ista":"Ondracek AS, Heiden D, Oostingh GJ, Fuerst E, Singer J, Bergmayr C, Rohrhofer J, Jensen-Jarolim E, Duschl A, Untersmayr E. 2019. Immune effects of the nitrated food allergen beta-lactoglobulin in an experimental food allergy model. Nutrients. 11(10), 2463."},"publisher":"MDPI","year":"2019","author":[{"full_name":"Ondracek, Anna S.","orcid":"0000-0001-7625-3651","first_name":"Anna S.","last_name":"Ondracek"},{"first_name":"Denise","last_name":"Heiden","full_name":"Heiden, Denise"},{"full_name":"Oostingh, Gertie J.","last_name":"Oostingh","first_name":"Gertie J."},{"full_name":"Fuerst, Elisabeth","first_name":"Elisabeth","last_name":"Fuerst"},{"full_name":"Fazekas-Singer, Judit","id":"36432834-F248-11E8-B48F-1D18A9856A87","last_name":"Fazekas-Singer","first_name":"Judit","orcid":"0000-0002-8777-3502"},{"first_name":"Cornelia","last_name":"Bergmayr","full_name":"Bergmayr, Cornelia"},{"last_name":"Rohrhofer","first_name":"Johanna","orcid":"0000-0002-2783-2099","full_name":"Rohrhofer, Johanna"},{"orcid":"0000-0003-4019-5765","first_name":"Erika","last_name":"Jensen-Jarolim","full_name":"Jensen-Jarolim, Erika"},{"orcid":"0000-0002-7034-9860","first_name":"Albert","last_name":"Duschl","full_name":"Duschl, Albert"},{"orcid":"0000-0002-1963-499X","last_name":"Untersmayr","first_name":"Eva","full_name":"Untersmayr, Eva"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2020-08-10T11:51:04Z","publication_status":"published"}]