[{"status":"public","language":[{"iso":"eng"}],"date_published":"2020-04-01T00:00:00Z","doi":"10.1016/j.jnt.2019.09.003","extern":"1","intvolume":" 209","volume":209,"type":"journal_article","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","month":"04","publisher":"Elsevier","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.1906.00632","open_access":"1"}],"page":"378-390","arxiv":1,"scopus_import":"1","title":"Primitive divisors of sequences associated to elliptic curves","external_id":{"arxiv":["1906.00632"]},"issue":"4","citation":{"ista":"Verzobio M. 2020. Primitive divisors of sequences associated to elliptic curves. Journal of Number Theory. 209(4), 378–390.","chicago":"Verzobio, Matteo. “Primitive Divisors of Sequences Associated to Elliptic Curves.” Journal of Number Theory. Elsevier, 2020. https://doi.org/10.1016/j.jnt.2019.09.003.","ieee":"M. Verzobio, “Primitive divisors of sequences associated to elliptic curves,” Journal of Number Theory, vol. 209, no. 4. Elsevier, pp. 378–390, 2020.","ama":"Verzobio M. Primitive divisors of sequences associated to elliptic curves. Journal of Number Theory. 2020;209(4):378-390. doi:10.1016/j.jnt.2019.09.003","apa":"Verzobio, M. (2020). Primitive divisors of sequences associated to elliptic curves. Journal of Number Theory. Elsevier. https://doi.org/10.1016/j.jnt.2019.09.003","mla":"Verzobio, Matteo. “Primitive Divisors of Sequences Associated to Elliptic Curves.” Journal of Number Theory, vol. 209, no. 4, Elsevier, 2020, pp. 378–90, doi:10.1016/j.jnt.2019.09.003.","short":"M. Verzobio, Journal of Number Theory 209 (2020) 378–390."},"author":[{"orcid":"0000-0002-0854-0306","full_name":"Verzobio, Matteo","id":"7aa8f170-131e-11ed-88e1-a9efd01027cb","first_name":"Matteo","last_name":"Verzobio"}],"date_updated":"2023-05-10T11:14:56Z","oa":1,"publication":"Journal of Number Theory","publication_identifier":{"issn":["0022-314X"]},"day":"01","abstract":[{"text":"Let be a sequence of points on an elliptic curve defined over a number field K. In this paper, we study the denominators of the x-coordinates of this sequence. We prove that, if Q is a torsion point of prime order, then for n large enough there always exists a primitive divisor. Later on, we show the link between the study of the primitive divisors and a Lang-Trotter conjecture. Indeed, given two points P and Q on the elliptic curve, we prove a lower bound for the number of primes p such that P is in the orbit of Q modulo p.","lang":"eng"}],"article_type":"original","publication_status":"published","keyword":["Algebra and Number Theory"],"article_processing_charge":"No","oa_version":"Preprint","quality_controlled":"1","_id":"12310","year":"2020","date_created":"2023-01-16T11:45:07Z"},{"doi":"10.1038/s41561-020-0615-0","date_published":"2020-09-02T00:00:00Z","language":[{"iso":"eng"}],"status":"public","intvolume":" 13","extern":"1","type":"journal_article","volume":13,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publisher":"Springer Nature","month":"09","page":"621-627","scopus_import":"1","title":"The state of rock debris covering Earth’s glaciers","issue":"9","citation":{"chicago":"Herreid, Sam, and Francesca Pellicciotti. “The State of Rock Debris Covering Earth’s Glaciers.” Nature Geoscience. Springer Nature, 2020. https://doi.org/10.1038/s41561-020-0615-0.","ista":"Herreid S, Pellicciotti F. 2020. The state of rock debris covering Earth’s glaciers. Nature Geoscience. 13(9), 621–627.","mla":"Herreid, Sam, and Francesca Pellicciotti. “The State of Rock Debris Covering Earth’s Glaciers.” Nature Geoscience, vol. 13, no. 9, Springer Nature, 2020, pp. 621–27, doi:10.1038/s41561-020-0615-0.","apa":"Herreid, S., & Pellicciotti, F. (2020). The state of rock debris covering Earth’s glaciers. Nature Geoscience. Springer Nature. https://doi.org/10.1038/s41561-020-0615-0","ama":"Herreid S, Pellicciotti F. The state of rock debris covering Earth’s glaciers. Nature Geoscience. 2020;13(9):621-627. doi:10.1038/s41561-020-0615-0","ieee":"S. Herreid and F. Pellicciotti, “The state of rock debris covering Earth’s glaciers,” Nature Geoscience, vol. 13, no. 9. Springer Nature, pp. 621–627, 2020.","short":"S. Herreid, F. Pellicciotti, Nature Geoscience 13 (2020) 621–627."},"author":[{"full_name":"Herreid, Sam","last_name":"Herreid","first_name":"Sam"},{"first_name":"Francesca","last_name":"Pellicciotti","id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","full_name":"Pellicciotti, Francesca"}],"date_updated":"2023-02-28T12:45:37Z","day":"02","publication":"Nature Geoscience","publication_identifier":{"issn":["1752-0894"],"eissn":["1752-0908"]},"related_material":{"link":[{"url":"https://doi.org/10.1038/s41561-020-0630-1","relation":"erratum"}]},"publication_status":"published","article_type":"original","abstract":[{"text":"Rock debris can accumulate on glacier surfaces and dramatically reduce glacier melt. The structure of a debris cover is unique to each glacier and sensitive to climate. Despite this, debris cover has been omitted from global glacier models and forecasts of their response to a changing climate. Fundamental to resolving these omissions is a global map of debris cover and an estimate of its future spatial evolution. Here we use Landsat imagery and a detailed correction to the Randolph Glacier Inventory to show that 7.3% of mountain glacier area is debris covered and over half of Earth’s debris is concentrated in three regions: Alaska (38.6% of total debris-covered area), Southwest Asia (12.6%) and Greenland (12.0%). We use a set of new metrics, which include stage, the current position of a glacier on its trajectory towards reaching its spatial carrying capacity of debris cover, to quantify the state of glaciers. Debris cover is present on 44% of Earth’s glaciers and prominent (>1.0 km2) on 15%. Of Earth’s glaciers, 20% have a substantial percentage of debris cover for which the net stage is 36% and the bulk of individual glaciers have evolved beyond an optimal moraine configuration favourable for debris-cover expansion. Use of this dataset in global-scale models will enable improved estimates of melt over 10.6% of the global glacier domain.","lang":"eng"}],"quality_controlled":"1","oa_version":"None","article_processing_charge":"No","keyword":["General Earth and Planetary Sciences"],"date_created":"2023-02-20T08:12:17Z","year":"2020","_id":"12593"},{"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","type":"journal_article","volume":56,"extern":"1","intvolume":" 56","date_published":"2020-08-01T00:00:00Z","doi":"10.1029/2020wr027188","status":"public","language":[{"iso":"eng"}],"scopus_import":"1","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1029/2020WR027188"}],"month":"08","publisher":"American Geophysical Union","day":"01","oa":1,"publication_identifier":{"eissn":["1944-7973"],"issn":["0043-1397"]},"publication":"Water Resources Research","author":[{"first_name":"Thomas E.","last_name":"Shaw","full_name":"Shaw, Thomas E."},{"full_name":"Caro, Alexis","first_name":"Alexis","last_name":"Caro"},{"last_name":"Mendoza","first_name":"Pablo","full_name":"Mendoza, Pablo"},{"full_name":"Ayala, Álvaro","first_name":"Álvaro","last_name":"Ayala"},{"id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","full_name":"Pellicciotti, Francesca","last_name":"Pellicciotti","first_name":"Francesca"},{"full_name":"Gascoin, Simon","last_name":"Gascoin","first_name":"Simon"},{"last_name":"McPhee","first_name":"James","full_name":"McPhee, James"}],"citation":{"short":"T.E. Shaw, A. Caro, P. Mendoza, Á. Ayala, F. Pellicciotti, S. Gascoin, J. McPhee, Water Resources Research 56 (2020).","ama":"Shaw TE, Caro A, Mendoza P, et al. The utility of optical satellite winter snow depths for initializing a glacio‐hydrological model of a High‐Elevation, Andean catchment. Water Resources Research. 2020;56(8). doi:10.1029/2020wr027188","ieee":"T. E. Shaw et al., “The utility of optical satellite winter snow depths for initializing a glacio‐hydrological model of a High‐Elevation, Andean catchment,” Water Resources Research, vol. 56, no. 8. American Geophysical Union, 2020.","apa":"Shaw, T. E., Caro, A., Mendoza, P., Ayala, Á., Pellicciotti, F., Gascoin, S., & McPhee, J. (2020). The utility of optical satellite winter snow depths for initializing a glacio‐hydrological model of a High‐Elevation, Andean catchment. Water Resources Research. American Geophysical Union. https://doi.org/10.1029/2020wr027188","mla":"Shaw, Thomas E., et al. “The Utility of Optical Satellite Winter Snow Depths for Initializing a Glacio‐hydrological Model of a High‐Elevation, Andean Catchment.” Water Resources Research, vol. 56, no. 8, e2020WR027188, American Geophysical Union, 2020, doi:10.1029/2020wr027188.","ista":"Shaw TE, Caro A, Mendoza P, Ayala Á, Pellicciotti F, Gascoin S, McPhee J. 2020. The utility of optical satellite winter snow depths for initializing a glacio‐hydrological model of a High‐Elevation, Andean catchment. Water Resources Research. 56(8), e2020WR027188.","chicago":"Shaw, Thomas E., Alexis Caro, Pablo Mendoza, Álvaro Ayala, Francesca Pellicciotti, Simon Gascoin, and James McPhee. “The Utility of Optical Satellite Winter Snow Depths for Initializing a Glacio‐hydrological Model of a High‐Elevation, Andean Catchment.” Water Resources Research. American Geophysical Union, 2020. https://doi.org/10.1029/2020wr027188."},"date_updated":"2023-02-28T12:41:45Z","issue":"8","article_number":"e2020WR027188","title":"The utility of optical satellite winter snow depths for initializing a glacio‐hydrological model of a High‐Elevation, Andean catchment","date_created":"2023-02-20T08:12:22Z","_id":"12594","year":"2020","quality_controlled":"1","article_processing_charge":"No","keyword":["Water Science and Technology"],"oa_version":"Published Version","article_type":"original","publication_status":"published","abstract":[{"lang":"eng","text":"Information about end-of-winter spatial distribution of snow depth is important for seasonal forecasts of spring/summer streamflow in high-mountain regions. Nevertheless, such information typically relies upon extrapolation from a sparse network of observations at low elevations. Here, we test the potential of high-resolution snow depth data derived from optical stereophotogrammetry of Pléiades satellites for improving the representation of snow depth initial conditions (SDICs) in a glacio-hydrological model and assess potential improvements in the skill of snowmelt and streamflow simulations in a high-elevation Andean catchment. We calibrate model parameters controlling glacier mass balance and snow cover evolution using ground-based and satellite observations, and consider the relative importance of accurate estimates of SDICs compared to model parameters and forcings. We find that Pléiades SDICs improve the simulation of snow-covered area, glacier mass balance, and monthly streamflow compared to alternative SDICs based upon extrapolation of meteorological variables or statistical methods to estimate SDICs based upon topography. Model simulations are found to be sensitive to SDICs in the early spring (up to 48% variability in modeled streamflow compared to the best estimate model), and to temperature gradients in all months that control albedo and melt rates over a large elevation range (>2,400 m). As such, appropriately characterizing the distribution of total snow volume with elevation is important for reproducing total streamflow and the proportions of snowmelt. Therefore, optical stereo-photogrammetry offers an advantage for obtaining SDICs that aid both the timing and magnitude of streamflow simulations, process representation (e.g., snow cover evolution) and has the potential for large spatial domains."}]},{"quality_controlled":"1","oa_version":"Published Version","article_processing_charge":"No","publication_status":"published","article_type":"original","abstract":[{"lang":"eng","text":"The seasonal dynamic changes of Tibetan glaciers have seen little prior investigation, despite the increase in geodetic studies of multi-year changes. This study compares seasonal glacier dynamics (“cold” and “warm” seasons) in the ablation zone of Parlung No. 4 Glacier, a temperate glacier in the monsoon-influenced southeastern Tibetan Plateau, by using repeat unpiloted aerial vehicle (UAV) surveys combined with Structure-from-Motion (SfM) photogrammetry and ground stake measurements. Our results showed that the surveyed ablation zone had a mean change of −2.7 m of ice surface elevation during the period of September 2018 to October 2019 but is characterized by significant seasonal cyclic variations with ice surface elevation lifting (+2.0 m) in the cold season (September 2018 to June 2019) but lowering (−4.7 m) in the warm season (June 2019 to October 2019). Over an annual timescale, surface lowering was greatly suppressed by the resupply of ice from the glacier’s accumulation area—the annual emergence velocity compensates for about 55% of surface ablation in our study area. Cold season emergence velocities (3.0 ± 1.2 m) were ~5-times larger than those observed in the warm season (0.6 ± 1.0 m). Distinct spring precipitation patterns may contribute to these distinct seasonal signals. Such seasonal dynamic conditions are possibly critical for different glacier responses to climate change in this region of the Tibetan Plateau, and perhaps further afield."}],"date_created":"2023-02-20T08:12:29Z","year":"2020","_id":"12595","article_number":"2389","issue":"15","title":"Seasonal dynamics of a temperate Tibetan glacier revealed by high-resolution UAV photogrammetry and in situ measurements","day":"24","publication_identifier":{"issn":["2072-4292"]},"publication":"Remote Sensing","oa":1,"citation":{"short":"W. Yang, C. Zhao, M. Westoby, T. Yao, Y. Wang, F. Pellicciotti, J. Zhou, Z. He, E. Miles, Remote Sensing 12 (2020).","ista":"Yang W, Zhao C, Westoby M, Yao T, Wang Y, Pellicciotti F, Zhou J, He Z, Miles E. 2020. Seasonal dynamics of a temperate Tibetan glacier revealed by high-resolution UAV photogrammetry and in situ measurements. Remote Sensing. 12(15), 2389.","chicago":"Yang, Wei, Chuanxi Zhao, Matthew Westoby, Tandong Yao, Yongjie Wang, Francesca Pellicciotti, Jianmin Zhou, Zhen He, and Evan Miles. “Seasonal Dynamics of a Temperate Tibetan Glacier Revealed by High-Resolution UAV Photogrammetry and in Situ Measurements.” Remote Sensing. MDPI, 2020. https://doi.org/10.3390/rs12152389.","ieee":"W. Yang et al., “Seasonal dynamics of a temperate Tibetan glacier revealed by high-resolution UAV photogrammetry and in situ measurements,” Remote Sensing, vol. 12, no. 15. MDPI, 2020.","ama":"Yang W, Zhao C, Westoby M, et al. Seasonal dynamics of a temperate Tibetan glacier revealed by high-resolution UAV photogrammetry and in situ measurements. Remote Sensing. 2020;12(15). doi:10.3390/rs12152389","apa":"Yang, W., Zhao, C., Westoby, M., Yao, T., Wang, Y., Pellicciotti, F., … Miles, E. (2020). Seasonal dynamics of a temperate Tibetan glacier revealed by high-resolution UAV photogrammetry and in situ measurements. Remote Sensing. MDPI. https://doi.org/10.3390/rs12152389","mla":"Yang, Wei, et al. “Seasonal Dynamics of a Temperate Tibetan Glacier Revealed by High-Resolution UAV Photogrammetry and in Situ Measurements.” Remote Sensing, vol. 12, no. 15, 2389, MDPI, 2020, doi:10.3390/rs12152389."},"author":[{"first_name":"Wei","last_name":"Yang","full_name":"Yang, Wei"},{"full_name":"Zhao, Chuanxi","last_name":"Zhao","first_name":"Chuanxi"},{"first_name":"Matthew","last_name":"Westoby","full_name":"Westoby, Matthew"},{"last_name":"Yao","first_name":"Tandong","full_name":"Yao, Tandong"},{"first_name":"Yongjie","last_name":"Wang","full_name":"Wang, Yongjie"},{"full_name":"Pellicciotti, Francesca","id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","last_name":"Pellicciotti","first_name":"Francesca"},{"last_name":"Zhou","first_name":"Jianmin","full_name":"Zhou, Jianmin"},{"full_name":"He, Zhen","last_name":"He","first_name":"Zhen"},{"full_name":"Miles, Evan","first_name":"Evan","last_name":"Miles"}],"date_updated":"2023-02-28T12:36:22Z","main_file_link":[{"open_access":"1","url":"https://doi.org/10.3390/rs12152389"}],"publisher":"MDPI","month":"07","scopus_import":"1","intvolume":" 12","extern":"1","doi":"10.3390/rs12152389","date_published":"2020-07-24T00:00:00Z","language":[{"iso":"eng"}],"status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","type":"journal_article","volume":12},{"main_file_link":[{"open_access":"1","url":"https://doi.org/10.5194/tc-14-2005-2020"}],"publisher":"Copernicus Publications","month":"06","scopus_import":"1","page":"2005-2027","intvolume":" 14","extern":"1","doi":"10.5194/tc-14-2005-2020","date_published":"2020-06-24T00:00:00Z","language":[{"iso":"eng"}],"status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","type":"journal_article","volume":14,"quality_controlled":"1","oa_version":"Published Version","article_processing_charge":"No","keyword":["Earth-Surface Processes","Water Science and Technology"],"publication_status":"published","article_type":"original","abstract":[{"lang":"eng","text":"As glaciers adjust their size in response to climate variations, long-term changes in meltwater production can be expected, affecting the local availability of water resources. We investigate glacier runoff in the period 1955–2016 in the Maipo River basin (4843 km2, 33.0–34.3∘ S, 69.8–70.5∘ W), in the semiarid Andes of Chile. The basin contains more than 800 glaciers, which cover 378 km2 in total (inventoried in 2000). We model the mass balance and runoff contribution of 26 glaciers with the physically oriented and fully distributed TOPKAPI (Topographic Kinematic Approximation and Integration)-ETH glacio-hydrological model and extrapolate the results to the entire basin. TOPKAPI-ETH is run at a daily time step using several glaciological and meteorological datasets, and its results are evaluated against streamflow records, remotely sensed snow cover, and geodetic mass balances for the periods 1955–2000 and 2000–2013. Results show that in 1955–2016 glacier mass balance had a general decreasing trend as a basin average but also had differences between the main sub-catchments. Glacier volume decreased by one-fifth (from 18.6±4.5 to 14.9±2.9 km3). Runoff from the initially glacierized areas was 177±25 mm yr−1 (16±7 % of the total contributions to the basin), but it shows a decreasing sequence of maxima, which can be linked to the interplay between a decrease in precipitation since the 1980s and the reduction of ice melt. Glaciers in the Maipo River basin will continue retreating because they are not in equilibrium with the current climate. In a hypothetical constant climate scenario, glacier volume would reduce to 81±38 % of the year 2000 volume, and glacier runoff would be 78±30 % of the 1955–2016 average. This would considerably decrease the drought mitigation capacity of the basin."}],"date_created":"2023-02-20T08:12:36Z","year":"2020","_id":"12596","issue":"6","title":"Glacier runoff variations since 1955 in the Maipo River basin, in the semiarid Andes of central Chile","day":"24","publication_identifier":{"issn":["1994-0424"]},"publication":"The Cryosphere","oa":1,"citation":{"ista":"Ayala Á, Farías-Barahona D, Huss M, Pellicciotti F, McPhee J, Farinotti D. 2020. Glacier runoff variations since 1955 in the Maipo River basin, in the semiarid Andes of central Chile. The Cryosphere. 14(6), 2005–2027.","chicago":"Ayala, Álvaro, David Farías-Barahona, Matthias Huss, Francesca Pellicciotti, James McPhee, and Daniel Farinotti. “Glacier Runoff Variations since 1955 in the Maipo River Basin, in the Semiarid Andes of Central Chile.” The Cryosphere. Copernicus Publications, 2020. https://doi.org/10.5194/tc-14-2005-2020.","ieee":"Á. Ayala, D. Farías-Barahona, M. Huss, F. Pellicciotti, J. McPhee, and D. Farinotti, “Glacier runoff variations since 1955 in the Maipo River basin, in the semiarid Andes of central Chile,” The Cryosphere, vol. 14, no. 6. Copernicus Publications, pp. 2005–2027, 2020.","ama":"Ayala Á, Farías-Barahona D, Huss M, Pellicciotti F, McPhee J, Farinotti D. Glacier runoff variations since 1955 in the Maipo River basin, in the semiarid Andes of central Chile. The Cryosphere. 2020;14(6):2005-2027. doi:10.5194/tc-14-2005-2020","apa":"Ayala, Á., Farías-Barahona, D., Huss, M., Pellicciotti, F., McPhee, J., & Farinotti, D. (2020). Glacier runoff variations since 1955 in the Maipo River basin, in the semiarid Andes of central Chile. The Cryosphere. Copernicus Publications. https://doi.org/10.5194/tc-14-2005-2020","mla":"Ayala, Álvaro, et al. “Glacier Runoff Variations since 1955 in the Maipo River Basin, in the Semiarid Andes of Central Chile.” The Cryosphere, vol. 14, no. 6, Copernicus Publications, 2020, pp. 2005–27, doi:10.5194/tc-14-2005-2020.","short":"Á. Ayala, D. Farías-Barahona, M. Huss, F. Pellicciotti, J. McPhee, D. Farinotti, The Cryosphere 14 (2020) 2005–2027."},"date_updated":"2023-02-28T12:32:31Z","author":[{"full_name":"Ayala, Álvaro","first_name":"Álvaro","last_name":"Ayala"},{"last_name":"Farías-Barahona","first_name":"David","full_name":"Farías-Barahona, David"},{"first_name":"Matthias","last_name":"Huss","full_name":"Huss, Matthias"},{"id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","full_name":"Pellicciotti, Francesca","last_name":"Pellicciotti","first_name":"Francesca"},{"first_name":"James","last_name":"McPhee","full_name":"McPhee, James"},{"last_name":"Farinotti","first_name":"Daniel","full_name":"Farinotti, Daniel"}]},{"main_file_link":[{"url":"https://doi.org/10.1017/jog.2020.12","open_access":"1"}],"publisher":"Cambridge University Press","month":"06","scopus_import":"1","page":"386-400","intvolume":" 66","extern":"1","language":[{"iso":"eng"}],"status":"public","doi":"10.1017/jog.2020.12","date_published":"2020-06-01T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":66,"type":"journal_article","oa_version":"Published Version","article_processing_charge":"No","keyword":["Earth-Surface Processes"],"quality_controlled":"1","abstract":[{"lang":"eng","text":"We examine the spatial patterns of near-surface air temperature (Ta) over a melting glacier using a multi-annual dataset from McCall Glacier, Alaska. The dataset consists of a 10-year (2005–2014) meteorological record along the glacier centreline up to an upper glacier cirque, spanning an elevation difference of 900 m. We test the validity of on-glacier linear lapse rates, and a model that calculates Ta based on the influence of katabatic winds and other heat sources along the glacier flow line. During the coldest hours of each summer (10% of time), average lapse rates across the entire glacier range from −4.7 to −6.7°C km−1, with a strong relationship between Ta and elevation (R2 > 0.7). During warm conditions, Ta shows more complex, non-linear patterns that are better explained by the flow line-dependent model, reducing errors by up to 0.5°C compared with linear lapse rates, although more uncertainty might be associated with these observations due to occasionally poor sensor ventilation. We conclude that Ta spatial distribution can vary significantly from year to year, and from one glacier section to another. Importantly, extrapolations using linear lapse rates from the ablation zone might lead to large underestimations of Ta on the upper glacier areas."}],"article_type":"original","publication_status":"published","year":"2020","_id":"12597","date_created":"2023-02-20T08:12:42Z","issue":"257","title":"Modelling spatial patterns of near-surface air temperature over a decade of melt seasons on McCall Glacier, Alaska","publication":"Journal of Glaciology","publication_identifier":{"eissn":["1727-5652"],"issn":["0022-1430"]},"oa":1,"day":"01","author":[{"full_name":"Troxler, Patrick","first_name":"Patrick","last_name":"Troxler"},{"full_name":"Ayala, Álvaro","first_name":"Álvaro","last_name":"Ayala"},{"full_name":"Shaw, Thomas E.","last_name":"Shaw","first_name":"Thomas E."},{"full_name":"Nolan, Matt","last_name":"Nolan","first_name":"Matt"},{"full_name":"Brock, Ben W.","first_name":"Ben W.","last_name":"Brock"},{"first_name":"Francesca","last_name":"Pellicciotti","full_name":"Pellicciotti, Francesca","id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70"}],"date_updated":"2023-02-28T12:28:45Z","citation":{"mla":"Troxler, Patrick, et al. “Modelling Spatial Patterns of Near-Surface Air Temperature over a Decade of Melt Seasons on McCall Glacier, Alaska.” Journal of Glaciology, vol. 66, no. 257, Cambridge University Press, 2020, pp. 386–400, doi:10.1017/jog.2020.12.","apa":"Troxler, P., Ayala, Á., Shaw, T. E., Nolan, M., Brock, B. W., & Pellicciotti, F. (2020). Modelling spatial patterns of near-surface air temperature over a decade of melt seasons on McCall Glacier, Alaska. Journal of Glaciology. Cambridge University Press. https://doi.org/10.1017/jog.2020.12","ama":"Troxler P, Ayala Á, Shaw TE, Nolan M, Brock BW, Pellicciotti F. Modelling spatial patterns of near-surface air temperature over a decade of melt seasons on McCall Glacier, Alaska. Journal of Glaciology. 2020;66(257):386-400. doi:10.1017/jog.2020.12","ieee":"P. Troxler, Á. Ayala, T. E. Shaw, M. Nolan, B. W. Brock, and F. Pellicciotti, “Modelling spatial patterns of near-surface air temperature over a decade of melt seasons on McCall Glacier, Alaska,” Journal of Glaciology, vol. 66, no. 257. Cambridge University Press, pp. 386–400, 2020.","chicago":"Troxler, Patrick, Álvaro Ayala, Thomas E. Shaw, Matt Nolan, Ben W. Brock, and Francesca Pellicciotti. “Modelling Spatial Patterns of Near-Surface Air Temperature over a Decade of Melt Seasons on McCall Glacier, Alaska.” Journal of Glaciology. Cambridge University Press, 2020. https://doi.org/10.1017/jog.2020.12.","ista":"Troxler P, Ayala Á, Shaw TE, Nolan M, Brock BW, Pellicciotti F. 2020. Modelling spatial patterns of near-surface air temperature over a decade of melt seasons on McCall Glacier, Alaska. Journal of Glaciology. 66(257), 386–400.","short":"P. Troxler, Á. Ayala, T.E. Shaw, M. Nolan, B.W. Brock, F. Pellicciotti, Journal of Glaciology 66 (2020) 386–400."}},{"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":56,"type":"journal_article","intvolume":" 56","extern":"1","language":[{"iso":"eng"}],"status":"public","doi":"10.1029/2019wr024880","date_published":"2020-02-01T00:00:00Z","scopus_import":"1","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1029/2019WR024880"}],"publisher":"American Geophysical Union","month":"02","publication":"Water Resources Research","publication_identifier":{"eissn":["1944-7973"],"issn":["0043-1397"]},"oa":1,"day":"01","citation":{"short":"T.E. Shaw, S. Gascoin, P.A. Mendoza, F. Pellicciotti, J. McPhee, Water Resources Research 56 (2020).","ieee":"T. E. Shaw, S. Gascoin, P. A. Mendoza, F. Pellicciotti, and J. McPhee, “Snow depth patterns in a high mountain Andean catchment from satellite optical tristereoscopic remote sensing,” Water Resources Research, vol. 56, no. 2. American Geophysical Union, 2020.","ama":"Shaw TE, Gascoin S, Mendoza PA, Pellicciotti F, McPhee J. Snow depth patterns in a high mountain Andean catchment from satellite optical tristereoscopic remote sensing. Water Resources Research. 2020;56(2). doi:10.1029/2019wr024880","apa":"Shaw, T. E., Gascoin, S., Mendoza, P. A., Pellicciotti, F., & McPhee, J. (2020). Snow depth patterns in a high mountain Andean catchment from satellite optical tristereoscopic remote sensing. Water Resources Research. American Geophysical Union. https://doi.org/10.1029/2019wr024880","mla":"Shaw, Thomas E., et al. “Snow Depth Patterns in a High Mountain Andean Catchment from Satellite Optical Tristereoscopic Remote Sensing.” Water Resources Research, vol. 56, no. 2, e2019WR024880, American Geophysical Union, 2020, doi:10.1029/2019wr024880.","ista":"Shaw TE, Gascoin S, Mendoza PA, Pellicciotti F, McPhee J. 2020. Snow depth patterns in a high mountain Andean catchment from satellite optical tristereoscopic remote sensing. Water Resources Research. 56(2), e2019WR024880.","chicago":"Shaw, Thomas E., Simon Gascoin, Pablo A. Mendoza, Francesca Pellicciotti, and James McPhee. “Snow Depth Patterns in a High Mountain Andean Catchment from Satellite Optical Tristereoscopic Remote Sensing.” Water Resources Research. American Geophysical Union, 2020. https://doi.org/10.1029/2019wr024880."},"author":[{"first_name":"Thomas E.","last_name":"Shaw","full_name":"Shaw, Thomas E."},{"last_name":"Gascoin","first_name":"Simon","full_name":"Gascoin, Simon"},{"first_name":"Pablo A.","last_name":"Mendoza","full_name":"Mendoza, Pablo A."},{"last_name":"Pellicciotti","first_name":"Francesca","id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","full_name":"Pellicciotti, Francesca"},{"full_name":"McPhee, James","first_name":"James","last_name":"McPhee"}],"date_updated":"2023-02-28T12:26:14Z","issue":"2","article_number":"e2019WR024880","title":"Snow depth patterns in a high mountain Andean catchment from satellite optical tristereoscopic remote sensing","year":"2020","_id":"12598","date_created":"2023-02-20T08:12:47Z","oa_version":"Published Version","article_processing_charge":"No","keyword":["Water Science and Technology"],"quality_controlled":"1","abstract":[{"text":"Obtaining detailed information about high mountain snowpacks is often limited by insufficient ground-based observations and uncertainty in the (re)distribution of solid precipitation. We utilize high-resolution optical images from Pléiades satellites to generate a snow depth map, at a spatial resolution of 4 m, for a high mountain catchment of central Chile. Results are negatively biased (median difference of −0.22 m) when compared against observations from a terrestrial Light Detection And Ranging scan, though replicate general snow depth variability well. Additionally, the Pléiades dataset is subject to data gaps (17% of total pixels), negative values for shallow snow (12%), and noise on slopes >40–50° (2%). We correct and filter the Pléiades snow depths using surface classification techniques of snow-free areas and a random forest model for data gap filling. Snow depths (with an estimated error of ~0.36 m) average 1.66 m and relate well to topographical parameters such as elevation and northness in a similar way to previous studies. However, estimations of snow depth based upon topography (TOPO) or physically based modeling (DBSM) cannot resolve localized processes (i.e., avalanching or wind scouring) that are detected by Pléiades, even when forced with locally calibrated data. Comparing these alternative model approaches to corrected Pléiades snow depths reveals total snow volume differences between −28% (DBSM) and +54% (TOPO) for the catchment and large differences across most elevation bands. Pléiades represents an important contribution to understanding snow accumulation at sparsely monitored catchments, though ideally requires a careful systematic validation procedure to identify catchment-scale biases and errors in the snow depth derivation.","lang":"eng"}],"article_type":"original","publication_status":"published"},{"quality_controlled":"1","article_processing_charge":"No","oa_version":"None","month":"01","publisher":"Springer Nature","article_type":"original","publication_status":"published","abstract":[{"lang":"eng","text":"Mountains are the water towers of the world, supplying a substantial part of both natural and anthropogenic water demands1,2. They are highly sensitive and prone to climate change3,4, yet their importance and vulnerability have not been quantified at the global scale. Here we present a global water tower index (WTI), which ranks all water towers in terms of their water-supplying role and the downstream dependence of ecosystems and society. For each water tower, we assess its vulnerability related to water stress, governance, hydropolitical tension and future climatic and socio-economic changes. We conclude that the most important (highest WTI) water towers are also among the most vulnerable, and that climatic and socio-economic changes will affect them profoundly. This could negatively impact 1.9 billion people living in (0.3 billion) or directly downstream of (1.6 billion) mountainous areas. Immediate action is required to safeguard the future of the world’s most important and vulnerable water towers."}],"date_created":"2023-02-20T08:12:53Z","_id":"12599","scopus_import":"1","year":"2020","page":"364-369","extern":"1","issue":"7790","intvolume":" 577","date_published":"2020-01-16T00:00:00Z","doi":"10.1038/s41586-019-1822-y","status":"public","title":"Importance and vulnerability of the world’s water towers","language":[{"iso":"eng"}],"day":"16","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication":"Nature","publication_identifier":{"issn":["0028-0836"],"eissn":["1476-4687"]},"author":[{"first_name":"W. W.","last_name":"Immerzeel","full_name":"Immerzeel, W. W."},{"last_name":"Lutz","first_name":"A. F.","full_name":"Lutz, A. F."},{"full_name":"Andrade, M.","last_name":"Andrade","first_name":"M."},{"last_name":"Bahl","first_name":"A.","full_name":"Bahl, A."},{"last_name":"Biemans","first_name":"H.","full_name":"Biemans, H."},{"full_name":"Bolch, T.","first_name":"T.","last_name":"Bolch"},{"full_name":"Hyde, S.","first_name":"S.","last_name":"Hyde"},{"full_name":"Brumby, S.","first_name":"S.","last_name":"Brumby"},{"full_name":"Davies, B. J.","last_name":"Davies","first_name":"B. J."},{"full_name":"Elmore, A. C.","first_name":"A. C.","last_name":"Elmore"},{"full_name":"Emmer, A.","last_name":"Emmer","first_name":"A."},{"last_name":"Feng","first_name":"M.","full_name":"Feng, M."},{"full_name":"Fernández, A.","first_name":"A.","last_name":"Fernández"},{"full_name":"Haritashya, U.","last_name":"Haritashya","first_name":"U."},{"full_name":"Kargel, J. S.","first_name":"J. S.","last_name":"Kargel"},{"full_name":"Koppes, M.","first_name":"M.","last_name":"Koppes"},{"full_name":"Kraaijenbrink, P. D. A.","last_name":"Kraaijenbrink","first_name":"P. D. A."},{"full_name":"Kulkarni, A. V.","first_name":"A. V.","last_name":"Kulkarni"},{"full_name":"Mayewski, P. A.","first_name":"P. A.","last_name":"Mayewski"},{"first_name":"S.","last_name":"Nepal","full_name":"Nepal, S."},{"last_name":"Pacheco","first_name":"P.","full_name":"Pacheco, P."},{"first_name":"T. H.","last_name":"Painter","full_name":"Painter, T. H."},{"id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","full_name":"Pellicciotti, Francesca","first_name":"Francesca","last_name":"Pellicciotti"},{"full_name":"Rajaram, H.","first_name":"H.","last_name":"Rajaram"},{"full_name":"Rupper, S.","last_name":"Rupper","first_name":"S."},{"first_name":"A.","last_name":"Sinisalo","full_name":"Sinisalo, A."},{"first_name":"A. B.","last_name":"Shrestha","full_name":"Shrestha, A. B."},{"full_name":"Viviroli, D.","first_name":"D.","last_name":"Viviroli"},{"full_name":"Wada, Y.","last_name":"Wada","first_name":"Y."},{"full_name":"Xiao, C.","first_name":"C.","last_name":"Xiao"},{"full_name":"Yao, T.","first_name":"T.","last_name":"Yao"},{"full_name":"Baillie, J. E. M.","last_name":"Baillie","first_name":"J. E. M."}],"citation":{"short":"W.W. Immerzeel, A.F. Lutz, M. Andrade, A. Bahl, H. Biemans, T. Bolch, S. Hyde, S. Brumby, B.J. Davies, A.C. Elmore, A. Emmer, M. Feng, A. Fernández, U. Haritashya, J.S. Kargel, M. Koppes, P.D.A. Kraaijenbrink, A.V. Kulkarni, P.A. Mayewski, S. Nepal, P. Pacheco, T.H. Painter, F. Pellicciotti, H. Rajaram, S. Rupper, A. Sinisalo, A.B. Shrestha, D. Viviroli, Y. Wada, C. Xiao, T. Yao, J.E.M. Baillie, Nature 577 (2020) 364–369.","ista":"Immerzeel WW, Lutz AF, Andrade M, Bahl A, Biemans H, Bolch T, Hyde S, Brumby S, Davies BJ, Elmore AC, Emmer A, Feng M, Fernández A, Haritashya U, Kargel JS, Koppes M, Kraaijenbrink PDA, Kulkarni AV, Mayewski PA, Nepal S, Pacheco P, Painter TH, Pellicciotti F, Rajaram H, Rupper S, Sinisalo A, Shrestha AB, Viviroli D, Wada Y, Xiao C, Yao T, Baillie JEM. 2020. Importance and vulnerability of the world’s water towers. Nature. 577(7790), 364–369.","chicago":"Immerzeel, W. W., A. F. Lutz, M. Andrade, A. Bahl, H. Biemans, T. Bolch, S. Hyde, et al. “Importance and Vulnerability of the World’s Water Towers.” Nature. Springer Nature, 2020. https://doi.org/10.1038/s41586-019-1822-y.","apa":"Immerzeel, W. W., Lutz, A. F., Andrade, M., Bahl, A., Biemans, H., Bolch, T., … Baillie, J. E. M. (2020). Importance and vulnerability of the world’s water towers. Nature. Springer Nature. https://doi.org/10.1038/s41586-019-1822-y","ama":"Immerzeel WW, Lutz AF, Andrade M, et al. Importance and vulnerability of the world’s water towers. Nature. 2020;577(7790):364-369. doi:10.1038/s41586-019-1822-y","ieee":"W. W. Immerzeel et al., “Importance and vulnerability of the world’s water towers,” Nature, vol. 577, no. 7790. Springer Nature, pp. 364–369, 2020.","mla":"Immerzeel, W. W., et al. “Importance and Vulnerability of the World’s Water Towers.” Nature, vol. 577, no. 7790, Springer Nature, 2020, pp. 364–69, doi:10.1038/s41586-019-1822-y."},"date_updated":"2023-02-28T12:17:38Z","type":"journal_article","volume":577},{"oa_version":"Published Version","keyword":["Organic Chemistry","Physical and Theoretical Chemistry"],"article_processing_charge":"No","quality_controlled":"1","abstract":[{"text":"Linear tetrapyrroles, called phyllobilins, are obtained as major catabolites upon chlorophyll degradation. Primarily, colorless phylloleucobilins featuring four deconjugated pyrrole units were identified. Their yellow counterparts, phylloxanthobilins, were discovered more recently. Although the two catabolites differ only by one double bond, physicochemical properties are very distinct. Moreover, the presence of the double bond seems to enhance physiologically relevant bioactivities: in contrast to phylloleucobilin, we identified a potent anti-proliferative activity for a phylloxanthobilin, and show that this natural product induces apoptotic cell death and a cell cycle arrest in cancer cells. Interestingly, upon modifying inactive phylloleucobilin by esterification, an anti-proliferative activity can be observed that increases with the chain lengths of the alkyl esters. We provide first evidence for anti-cancer activity of phyllobilins, report a novel plant source for a phylloxanthobilin, and by using paper spray MS, show that these bioactive yellow chlorophyll catabolites are more prevalent in Nature than previously assumed.","lang":"eng"}],"publication_status":"published","article_type":"original","year":"2020","_id":"12939","date_created":"2023-05-10T14:49:30Z","issue":"29","title":"Phylloxanthobilins are abundant linear tetrapyrroles from chlorophyll breakdown with activities against cancer cells","publication":"European Journal of Organic Chemistry","publication_identifier":{"issn":["1434-193X","1099-0690"]},"oa":1,"day":"09","date_updated":"2023-05-15T07:57:14Z","citation":{"apa":"Karg, C. A., Wang, P., Kluibenschedl, F., Müller, T., Allmendinger, L., Vollmar, A. M., & Moser, S. (2020). Phylloxanthobilins are abundant linear tetrapyrroles from chlorophyll breakdown with activities against cancer cells. European Journal of Organic Chemistry. Wiley. https://doi.org/10.1002/ejoc.202000692","ieee":"C. A. Karg et al., “Phylloxanthobilins are abundant linear tetrapyrroles from chlorophyll breakdown with activities against cancer cells,” European Journal of Organic Chemistry, vol. 2020, no. 29. Wiley, pp. 4499–4509, 2020.","ama":"Karg CA, Wang P, Kluibenschedl F, et al. Phylloxanthobilins are abundant linear tetrapyrroles from chlorophyll breakdown with activities against cancer cells. European Journal of Organic Chemistry. 2020;2020(29):4499-4509. doi:10.1002/ejoc.202000692","mla":"Karg, Cornelia A., et al. “Phylloxanthobilins Are Abundant Linear Tetrapyrroles from Chlorophyll Breakdown with Activities against Cancer Cells.” European Journal of Organic Chemistry, vol. 2020, no. 29, Wiley, 2020, pp. 4499–509, doi:10.1002/ejoc.202000692.","ista":"Karg CA, Wang P, Kluibenschedl F, Müller T, Allmendinger L, Vollmar AM, Moser S. 2020. Phylloxanthobilins are abundant linear tetrapyrroles from chlorophyll breakdown with activities against cancer cells. European Journal of Organic Chemistry. 2020(29), 4499–4509.","chicago":"Karg, Cornelia A., Pengyu Wang, Florian Kluibenschedl, Thomas Müller, Lars Allmendinger, Angelika M. Vollmar, and Simone Moser. “Phylloxanthobilins Are Abundant Linear Tetrapyrroles from Chlorophyll Breakdown with Activities against Cancer Cells.” European Journal of Organic Chemistry. Wiley, 2020. https://doi.org/10.1002/ejoc.202000692.","short":"C.A. Karg, P. Wang, F. Kluibenschedl, T. Müller, L. Allmendinger, A.M. Vollmar, S. Moser, European Journal of Organic Chemistry 2020 (2020) 4499–4509."},"author":[{"first_name":"Cornelia A.","last_name":"Karg","full_name":"Karg, Cornelia A."},{"first_name":"Pengyu","last_name":"Wang","full_name":"Wang, Pengyu"},{"first_name":"Florian","last_name":"Kluibenschedl","full_name":"Kluibenschedl, Florian","id":"7499e70e-eb2c-11ec-b98b-f925648bc9d9"},{"full_name":"Müller, Thomas","first_name":"Thomas","last_name":"Müller"},{"last_name":"Allmendinger","first_name":"Lars","full_name":"Allmendinger, Lars"},{"last_name":"Vollmar","first_name":"Angelika M.","full_name":"Vollmar, Angelika M."},{"first_name":"Simone","last_name":"Moser","full_name":"Moser, Simone"}],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1002/ejoc.202000692"}],"publisher":"Wiley","month":"08","scopus_import":"1","page":"4499-4509","intvolume":" 2020","extern":"1","language":[{"iso":"eng"}],"status":"public","doi":"10.1002/ejoc.202000692","date_published":"2020-08-09T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":2020,"type":"journal_article"},{"year":"2020","_id":"12940","pmid":1,"date_created":"2023-05-10T14:50:19Z","abstract":[{"text":"Desorption electrospray ionization (DESI), easy ambient sonic-spray ionization (EASI) and low-temperature plasma (LTP) ionization are powerful ambient ionization techniques for mass spectrometry. However, every single method has its limitation in terms of polarity and molecular weight of analyte molecules. After the miniaturization of every possible component of the different ion sources, we finally were able to embed two emitters and an ion transfer tubing into a small, hand-held device. The pen-like interface is connected to the mass spectrometer and a separate control unit via a bundle of flexible tubing and cables. The novel device allows the user to ionize an extended range of chemicals by simple switching between DESI, voltage-free EASI, or LTP ionization as well as to freely move the interface over a surface of interest. A mini camera, which is mounted on the tip of the pen, magnifies the desorption area and enables a simple positioning of the pen. The interface was successfully tested using different types of chemicals, pharmaceuticals, and real life samples. Moreover, the combination of optical data from the camera module and chemical data obtained by mass analysis facilitates a novel type of imaging mass spectrometry, which we name “interactive mass spectrometry imaging (IMSI)”.","lang":"eng"}],"publication_status":"published","article_type":"letter_note","oa_version":"Published Version","keyword":["Analytical Chemistry"],"article_processing_charge":"No","quality_controlled":"1","citation":{"ama":"Meisenbichler C, Kluibenschedl F, Müller T. A 3-in-1 hand-held ambient mass spectrometry interface for identification and 2D localization of chemicals on surfaces. Analytical Chemistry. 2020;92(21):14314-14318. doi:10.1021/acs.analchem.0c02615","ieee":"C. Meisenbichler, F. Kluibenschedl, and T. Müller, “A 3-in-1 hand-held ambient mass spectrometry interface for identification and 2D localization of chemicals on surfaces,” Analytical Chemistry, vol. 92, no. 21. American Chemical Society, pp. 14314–14318, 2020.","apa":"Meisenbichler, C., Kluibenschedl, F., & Müller, T. (2020). A 3-in-1 hand-held ambient mass spectrometry interface for identification and 2D localization of chemicals on surfaces. Analytical Chemistry. American Chemical Society. https://doi.org/10.1021/acs.analchem.0c02615","mla":"Meisenbichler, Christina, et al. “A 3-in-1 Hand-Held Ambient Mass Spectrometry Interface for Identification and 2D Localization of Chemicals on Surfaces.” Analytical Chemistry, vol. 92, no. 21, American Chemical Society, 2020, pp. 14314–18, doi:10.1021/acs.analchem.0c02615.","ista":"Meisenbichler C, Kluibenschedl F, Müller T. 2020. A 3-in-1 hand-held ambient mass spectrometry interface for identification and 2D localization of chemicals on surfaces. Analytical Chemistry. 92(21), 14314–14318.","chicago":"Meisenbichler, Christina, Florian Kluibenschedl, and Thomas Müller. “A 3-in-1 Hand-Held Ambient Mass Spectrometry Interface for Identification and 2D Localization of Chemicals on Surfaces.” Analytical Chemistry. American Chemical Society, 2020. https://doi.org/10.1021/acs.analchem.0c02615.","short":"C. Meisenbichler, F. Kluibenschedl, T. Müller, Analytical Chemistry 92 (2020) 14314–14318."},"date_updated":"2023-05-15T08:01:20Z","author":[{"full_name":"Meisenbichler, Christina","first_name":"Christina","last_name":"Meisenbichler"},{"first_name":"Florian","last_name":"Kluibenschedl","full_name":"Kluibenschedl, Florian","id":"7499e70e-eb2c-11ec-b98b-f925648bc9d9"},{"full_name":"Müller, Thomas","first_name":"Thomas","last_name":"Müller"}],"publication":"Analytical Chemistry","publication_identifier":{"issn":["0003-2700","1520-6882"]},"oa":1,"day":"16","title":"A 3-in-1 hand-held ambient mass spectrometry interface for identification and 2D localization of chemicals on surfaces","external_id":{"pmid":["33063994"]},"issue":"21","page":"14314-14318","scopus_import":"1","publisher":"American Chemical Society","month":"10","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1021/acs.analchem.0c02615"}],"volume":92,"type":"journal_article","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","language":[{"iso":"eng"}],"status":"public","doi":"10.1021/acs.analchem.0c02615","date_published":"2020-10-16T00:00:00Z","intvolume":" 92","extern":"1"},{"doi":"10.5281/ZENODO.3961561","date_published":"2020-07-27T00:00:00Z","status":"public","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"title":"Converting microwave and telecom photons with a silicon photonic nanomechanical interface","ddc":["530"],"author":[{"first_name":"Georg M","last_name":"Arnold","orcid":"0000-0003-1397-7876","full_name":"Arnold, Georg M","id":"3770C838-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Wulf","first_name":"Matthias","orcid":"0000-0001-6613-1378","id":"45598606-F248-11E8-B48F-1D18A9856A87","full_name":"Wulf, Matthias"},{"orcid":"0000-0003-0415-1423","id":"2D25E1F6-F248-11E8-B48F-1D18A9856A87","full_name":"Barzanjeh, Shabir","first_name":"Shabir","last_name":"Barzanjeh"},{"id":"2C21D6E8-F248-11E8-B48F-1D18A9856A87","full_name":"Redchenko, Elena","first_name":"Elena","last_name":"Redchenko"},{"full_name":"Rueda Sanchez, Alfredo R","id":"3B82B0F8-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-6249-5860","first_name":"Alfredo R","last_name":"Rueda Sanchez"},{"last_name":"Hease","first_name":"William J","orcid":"0000-0001-9868-2166","id":"29705398-F248-11E8-B48F-1D18A9856A87","full_name":"Hease, William J"},{"full_name":"Hassani, Farid","id":"2AED110C-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-6937-5773","last_name":"Hassani","first_name":"Farid"},{"orcid":"0000-0001-8112-028X","id":"4B591CBA-F248-11E8-B48F-1D18A9856A87","full_name":"Fink, Johannes M","last_name":"Fink","first_name":"Johannes M"}],"date_updated":"2024-09-10T12:23:51Z","citation":{"ista":"Arnold GM, Wulf M, Barzanjeh S, Redchenko E, Rueda Sanchez AR, Hease WJ, Hassani F, Fink JM. 2020. Converting microwave and telecom photons with a silicon photonic nanomechanical interface, Zenodo, 10.5281/ZENODO.3961561.","chicago":"Arnold, Georg M, Matthias Wulf, Shabir Barzanjeh, Elena Redchenko, Alfredo R Rueda Sanchez, William J Hease, Farid Hassani, and Johannes M Fink. “Converting Microwave and Telecom Photons with a Silicon Photonic Nanomechanical Interface.” Zenodo, 2020. https://doi.org/10.5281/ZENODO.3961561.","ieee":"G. M. Arnold et al., “Converting microwave and telecom photons with a silicon photonic nanomechanical interface.” Zenodo, 2020.","apa":"Arnold, G. M., Wulf, M., Barzanjeh, S., Redchenko, E., Rueda Sanchez, A. R., Hease, W. J., … Fink, J. M. (2020). Converting microwave and telecom photons with a silicon photonic nanomechanical interface. Zenodo. https://doi.org/10.5281/ZENODO.3961561","ama":"Arnold GM, Wulf M, Barzanjeh S, et al. Converting microwave and telecom photons with a silicon photonic nanomechanical interface. 2020. doi:10.5281/ZENODO.3961561","mla":"Arnold, Georg M., et al. Converting Microwave and Telecom Photons with a Silicon Photonic Nanomechanical Interface. Zenodo, 2020, doi:10.5281/ZENODO.3961561.","short":"G.M. Arnold, M. Wulf, S. Barzanjeh, E. Redchenko, A.R. Rueda Sanchez, W.J. Hease, F. Hassani, J.M. Fink, (2020)."},"type":"research_data_reference","day":"27","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa":1,"publisher":"Zenodo","department":[{"_id":"JoFi"}],"related_material":{"record":[{"status":"public","id":"8529","relation":"used_in_publication"}]},"month":"07","abstract":[{"text":"This datasets comprises all data shown in plots of the submitted article \"Converting microwave and telecom photons with a silicon photonic nanomechanical interface\". Additional raw data are available from the corresponding author on reasonable request.","lang":"eng"}],"license":"https://creativecommons.org/licenses/by/4.0/","main_file_link":[{"open_access":"1","url":"https://doi.org/10.5281/zenodo.3961562"}],"oa_version":"Published Version","article_processing_charge":"No","date_created":"2023-05-23T13:37:41Z","year":"2020","_id":"13056"},{"ddc":["570"],"status":"public","tmp":{"image":"/images/cc_0.png","name":"Creative Commons Public Domain Dedication (CC0 1.0)","short":"CC0 (1.0)","legal_code_url":"https://creativecommons.org/publicdomain/zero/1.0/legalcode"},"title":"Social immunity modulates competition between coinfecting pathogens","doi":"10.5061/DRYAD.CRJDFN318","date_published":"2020-12-19T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa":1,"day":"19","citation":{"short":"B. Milutinovic, M. Stock, A.V. Grasse, E. Naderlinger, C. Hilbe, S. Cremer, (2020).","ista":"Milutinovic B, Stock M, Grasse AV, Naderlinger E, Hilbe C, Cremer S. 2020. Social immunity modulates competition between coinfecting pathogens, Dryad, 10.5061/DRYAD.CRJDFN318.","chicago":"Milutinovic, Barbara, Miriam Stock, Anna V Grasse, Elisabeth Naderlinger, Christian Hilbe, and Sylvia Cremer. “Social Immunity Modulates Competition between Coinfecting Pathogens.” Dryad, 2020. https://doi.org/10.5061/DRYAD.CRJDFN318.","ama":"Milutinovic B, Stock M, Grasse AV, Naderlinger E, Hilbe C, Cremer S. Social immunity modulates competition between coinfecting pathogens. 2020. doi:10.5061/DRYAD.CRJDFN318","ieee":"B. Milutinovic, M. Stock, A. V. Grasse, E. Naderlinger, C. Hilbe, and S. Cremer, “Social immunity modulates competition between coinfecting pathogens.” Dryad, 2020.","apa":"Milutinovic, B., Stock, M., Grasse, A. V., Naderlinger, E., Hilbe, C., & Cremer, S. (2020). Social immunity modulates competition between coinfecting pathogens. Dryad. https://doi.org/10.5061/DRYAD.CRJDFN318","mla":"Milutinovic, Barbara, et al. Social Immunity Modulates Competition between Coinfecting Pathogens. Dryad, 2020, doi:10.5061/DRYAD.CRJDFN318."},"type":"research_data_reference","author":[{"full_name":"Milutinovic, Barbara","id":"2CDC32B8-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-8214-4758","first_name":"Barbara","last_name":"Milutinovic"},{"last_name":"Stock","first_name":"Miriam","id":"42462816-F248-11E8-B48F-1D18A9856A87","full_name":"Stock, Miriam"},{"first_name":"Anna V","last_name":"Grasse","id":"406F989C-F248-11E8-B48F-1D18A9856A87","full_name":"Grasse, Anna V"},{"last_name":"Naderlinger","first_name":"Elisabeth","id":"31757262-F248-11E8-B48F-1D18A9856A87","full_name":"Naderlinger, Elisabeth"},{"last_name":"Hilbe","first_name":"Christian","id":"2FDF8F3C-F248-11E8-B48F-1D18A9856A87","full_name":"Hilbe, Christian","orcid":"0000-0001-5116-955X"},{"full_name":"Cremer, Sylvia","id":"2F64EC8C-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-2193-3868","last_name":"Cremer","first_name":"Sylvia"}],"date_updated":"2023-09-05T16:04:48Z","oa_version":"Published Version","article_processing_charge":"No","license":"https://creativecommons.org/publicdomain/zero/1.0/","main_file_link":[{"url":"https://doi.org/10.5061/dryad.crjdfn318","open_access":"1"}],"abstract":[{"lang":"eng","text":"Coinfections with multiple pathogens can result in complex within-host dynamics affecting virulence and transmission. Whilst multiple infections are intensively studied in solitary hosts, it is so far unresolved how social host interactions interfere with pathogen competition, and if this depends on coinfection diversity. We studied how the collective disease defenses of ants – their social immunity – influence pathogen competition in coinfections of same or different fungal pathogen species. Social immunity reduced virulence for all pathogen combinations, but interfered with spore production only in different-species coinfections. Here, it decreased overall pathogen sporulation success, whilst simultaneously increasing co-sporulation on individual cadavers and maintaining a higher pathogen diversity at the community-level. Mathematical modeling revealed that host sanitary care alone can modulate competitive outcomes between pathogens, giving advantage to fast-germinating, thus less grooming-sensitive ones. Host social interactions can hence modulate infection dynamics in coinfected group members, thereby altering pathogen communities at the host- and population-level."}],"department":[{"_id":"SyCr"},{"_id":"KrCh"}],"related_material":{"record":[{"status":"public","id":"7343","relation":"used_in_publication"}]},"publisher":"Dryad","month":"12","year":"2020","_id":"13060","date_created":"2023-05-23T16:11:22Z"},{"department":[{"_id":"NiBa"}],"related_material":{"link":[{"url":"https://github.com/starnoux/arnoux_et_al_2019","relation":"software"}],"record":[{"relation":"used_in_publication","status":"public","id":"8928"}]},"publisher":"Dryad","month":"10","abstract":[{"lang":"eng","text":"Domestication is a human-induced selection process that imprints the genomes of domesticated populations over a short evolutionary time scale, and that occurs in a given demographic context. Reconstructing historical gene flow, effective population size changes and their timing is therefore of fundamental interest to understand how plant demography and human selection jointly shape genomic divergence during domestication. Yet, the comparison under a single statistical framework of independent domestication histories across different crop species has been little evaluated so far. Thus, it is unclear whether domestication leads to convergent demographic changes that similarly affect crop genomes. To address this question, we used existing and new transcriptome data on three crop species of Solanaceae (eggplant, pepper and tomato), together with their close wild relatives. We fitted twelve demographic models of increasing complexity on the unfolded joint allele frequency spectrum for each wild/crop pair, and we found evidence for both shared and species-specific demographic processes between species. A convergent history of domestication with gene-flow was inferred for all three species, along with evidence of strong reduction in the effective population size during the cultivation stage of tomato and pepper. The absence of any reduction in size of the crop in eggplant stands out from the classical view of the domestication process; as does the existence of a “protracted period” of management before cultivation. Our results also suggest divergent management strategies of modern cultivars among species as their current demography substantially differs. Finally, the timing of domestication is species-specific and supported by the few historical records available."}],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.5061/dryad.q2bvq83hd"}],"oa_version":"Published Version","article_processing_charge":"No","date_created":"2023-05-23T16:30:20Z","year":"2020","_id":"13065","doi":"10.5061/DRYAD.Q2BVQ83HD","date_published":"2020-10-19T00:00:00Z","title":"VCF files of synonymous SNPs related to: Genomic inference of complex domestication histories in three Solanaceae species","tmp":{"image":"/images/cc_0.png","name":"Creative Commons Public Domain Dedication (CC0 1.0)","short":"CC0 (1.0)","legal_code_url":"https://creativecommons.org/publicdomain/zero/1.0/legalcode"},"status":"public","ddc":["570"],"date_updated":"2023-08-04T11:19:26Z","citation":{"short":"S. Arnoux, C. Fraisse, C. Sauvage, (2020).","ista":"Arnoux S, Fraisse C, Sauvage C. 2020. VCF files of synonymous SNPs related to: Genomic inference of complex domestication histories in three Solanaceae species, Dryad, 10.5061/DRYAD.Q2BVQ83HD.","chicago":"Arnoux, Stephanie, Christelle Fraisse, and Christopher Sauvage. “VCF Files of Synonymous SNPs Related to: Genomic Inference of Complex Domestication Histories in Three Solanaceae Species.” Dryad, 2020. https://doi.org/10.5061/DRYAD.Q2BVQ83HD.","ieee":"S. Arnoux, C. Fraisse, and C. Sauvage, “VCF files of synonymous SNPs related to: Genomic inference of complex domestication histories in three Solanaceae species.” Dryad, 2020.","ama":"Arnoux S, Fraisse C, Sauvage C. VCF files of synonymous SNPs related to: Genomic inference of complex domestication histories in three Solanaceae species. 2020. doi:10.5061/DRYAD.Q2BVQ83HD","apa":"Arnoux, S., Fraisse, C., & Sauvage, C. (2020). VCF files of synonymous SNPs related to: Genomic inference of complex domestication histories in three Solanaceae species. Dryad. https://doi.org/10.5061/DRYAD.Q2BVQ83HD","mla":"Arnoux, Stephanie, et al. VCF Files of Synonymous SNPs Related to: Genomic Inference of Complex Domestication Histories in Three Solanaceae Species. Dryad, 2020, doi:10.5061/DRYAD.Q2BVQ83HD."},"author":[{"full_name":"Arnoux, Stephanie","last_name":"Arnoux","first_name":"Stephanie"},{"id":"32DF5794-F248-11E8-B48F-1D18A9856A87","full_name":"Fraisse, Christelle","orcid":"0000-0001-8441-5075","last_name":"Fraisse","first_name":"Christelle"},{"full_name":"Sauvage, Christopher","last_name":"Sauvage","first_name":"Christopher"}],"type":"research_data_reference","day":"19","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa":1},{"type":"research_data_reference","date_updated":"2024-09-10T12:23:56Z","citation":{"short":"M. Peruzzo, A. Trioni, F. Hassani, M. Zemlicka, J.M. Fink, (2020).","mla":"Peruzzo, Matilda, et al. Surpassing the Resistance Quantum with a Geometric Superinductor. Zenodo, 2020, doi:10.5281/ZENODO.4052882.","ieee":"M. Peruzzo, A. Trioni, F. Hassani, M. Zemlicka, and J. M. Fink, “Surpassing the resistance quantum with a geometric superinductor.” Zenodo, 2020.","apa":"Peruzzo, M., Trioni, A., Hassani, F., Zemlicka, M., & Fink, J. M. (2020). Surpassing the resistance quantum with a geometric superinductor. Zenodo. https://doi.org/10.5281/ZENODO.4052882","ama":"Peruzzo M, Trioni A, Hassani F, Zemlicka M, Fink JM. Surpassing the resistance quantum with a geometric superinductor. 2020. doi:10.5281/ZENODO.4052882","chicago":"Peruzzo, Matilda, Andrea Trioni, Farid Hassani, Martin Zemlicka, and Johannes M Fink. “Surpassing the Resistance Quantum with a Geometric Superinductor.” Zenodo, 2020. https://doi.org/10.5281/ZENODO.4052882.","ista":"Peruzzo M, Trioni A, Hassani F, Zemlicka M, Fink JM. 2020. Surpassing the resistance quantum with a geometric superinductor, Zenodo, 10.5281/ZENODO.4052882."},"author":[{"first_name":"Matilda","last_name":"Peruzzo","orcid":"0000-0002-3415-4628","full_name":"Peruzzo, Matilda","id":"3F920B30-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Trioni","first_name":"Andrea","full_name":"Trioni, Andrea","id":"42F71B44-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Hassani","first_name":"Farid","id":"2AED110C-F248-11E8-B48F-1D18A9856A87","full_name":"Hassani, Farid","orcid":"0000-0001-6937-5773"},{"full_name":"Zemlicka, Martin","id":"2DCF8DE6-F248-11E8-B48F-1D18A9856A87","last_name":"Zemlicka","first_name":"Martin"},{"first_name":"Johannes M","last_name":"Fink","full_name":"Fink, Johannes M","id":"4B591CBA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-8112-028X"}],"oa":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","day":"27","title":"Surpassing the resistance quantum with a geometric superinductor","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"status":"public","date_published":"2020-09-27T00:00:00Z","doi":"10.5281/ZENODO.4052882","ddc":["530"],"_id":"13070","year":"2020","date_created":"2023-05-23T16:42:30Z","abstract":[{"lang":"eng","text":"This dataset comprises all data shown in the figures of the submitted article \"Surpassing the resistance quantum with a geometric superinductor\". Additional raw data are available from the corresponding author on reasonable request."}],"month":"09","department":[{"_id":"JoFi"}],"publisher":"Zenodo","related_material":{"record":[{"relation":"used_in_publication","id":"8755","status":"public"}]},"article_processing_charge":"No","oa_version":"Published Version","main_file_link":[{"url":"https://doi.org/10.5281/zenodo.4052883","open_access":"1"}]},{"_id":"13071","year":"2020","date_created":"2023-05-23T16:44:11Z","abstract":[{"lang":"eng","text":"This dataset comprises all data shown in the plots of the main part of the submitted article \"Bidirectional Electro-Optic Wavelength Conversion in the Quantum Ground State\". Additional raw data are available from the corresponding author on reasonable request."}],"month":"11","department":[{"_id":"JoFi"}],"related_material":{"record":[{"relation":"used_in_publication","status":"public","id":"9114"}]},"publisher":"Zenodo","article_processing_charge":"No","oa_version":"Published Version","main_file_link":[{"open_access":"1","url":"https://doi.org/10.5281/zenodo.4266026"}],"author":[{"last_name":"Hease","first_name":"William J","full_name":"Hease, William J","id":"29705398-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-9868-2166"},{"orcid":"0000-0001-6249-5860","full_name":"Rueda Sanchez, Alfredo R","id":"3B82B0F8-F248-11E8-B48F-1D18A9856A87","last_name":"Rueda Sanchez","first_name":"Alfredo R"},{"last_name":"Sahu","first_name":"Rishabh","orcid":"0000-0001-6264-2162","full_name":"Sahu, Rishabh","id":"47D26E34-F248-11E8-B48F-1D18A9856A87"},{"orcid":"0000-0001-6613-1378","full_name":"Wulf, Matthias","id":"45598606-F248-11E8-B48F-1D18A9856A87","first_name":"Matthias","last_name":"Wulf"},{"last_name":"Arnold","first_name":"Georg M","full_name":"Arnold, Georg M","id":"3770C838-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-1397-7876"},{"full_name":"Schwefel, Harald","last_name":"Schwefel","first_name":"Harald"},{"last_name":"Fink","first_name":"Johannes M","id":"4B591CBA-F248-11E8-B48F-1D18A9856A87","full_name":"Fink, Johannes M","orcid":"0000-0001-8112-028X"}],"citation":{"short":"W.J. Hease, A.R. Rueda Sanchez, R. Sahu, M. Wulf, G.M. Arnold, H. Schwefel, J.M. Fink, (2020).","chicago":"Hease, William J, Alfredo R Rueda Sanchez, Rishabh Sahu, Matthias Wulf, Georg M Arnold, Harald Schwefel, and Johannes M Fink. “Bidirectional Electro-Optic Wavelength Conversion in the Quantum Ground State.” Zenodo, 2020. https://doi.org/10.5281/ZENODO.4266025.","ista":"Hease WJ, Rueda Sanchez AR, Sahu R, Wulf M, Arnold GM, Schwefel H, Fink JM. 2020. Bidirectional electro-optic wavelength conversion in the quantum ground state, Zenodo, 10.5281/ZENODO.4266025.","mla":"Hease, William J., et al. Bidirectional Electro-Optic Wavelength Conversion in the Quantum Ground State. Zenodo, 2020, doi:10.5281/ZENODO.4266025.","ieee":"W. J. Hease et al., “Bidirectional electro-optic wavelength conversion in the quantum ground state.” Zenodo, 2020.","ama":"Hease WJ, Rueda Sanchez AR, Sahu R, et al. Bidirectional electro-optic wavelength conversion in the quantum ground state. 2020. doi:10.5281/ZENODO.4266025","apa":"Hease, W. J., Rueda Sanchez, A. R., Sahu, R., Wulf, M., Arnold, G. M., Schwefel, H., & Fink, J. M. (2020). Bidirectional electro-optic wavelength conversion in the quantum ground state. Zenodo. https://doi.org/10.5281/ZENODO.4266025"},"date_updated":"2024-09-10T12:23:54Z","type":"research_data_reference","oa":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","day":"10","title":"Bidirectional electro-optic wavelength conversion in the quantum ground state","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"status":"public","date_published":"2020-11-10T00:00:00Z","doi":"10.5281/ZENODO.4266025","ddc":["530"]},{"main_file_link":[{"open_access":"1","url":"https://doi.org/10.5061/dryad.r4xgxd29n"}],"article_processing_charge":"No","oa_version":"Published Version","month":"09","related_material":{"record":[{"relation":"used_in_publication","id":"8708","status":"public"}]},"publisher":"Dryad","department":[{"_id":"NiBa"}],"abstract":[{"lang":"eng","text":"The Mytilus complex of marine mussel species forms a mosaic of hybrid zones, found across temperate regions of the globe. This allows us to study \"replicated\" instances of secondary contact between closely-related species. Previous work on this complex has shown that local introgression is both widespread and highly heterogeneous, and has identified SNPs that are outliers of differentiation between lineages. Here, we developed an ancestry-informative panel of such SNPs. We then compared their frequencies in newly-sampled populations, including samples from within the hybrid zones, and parental populations at different distances from the contact. Results show that close to the hybrid zones, some outlier loci are near to fixation for the heterospecific allele, suggesting enhanced local introgression, or the local sweep of a shared ancestral allele. Conversely, genomic cline analyses, treating local parental populations as the reference, reveal a globally high concordance among loci, albeit with a few signals of asymmetric introgression. Enhanced local introgression at specific loci is consistent with the early transfer of adaptive variants after contact, possibly including asymmetric bi-stable variants (Dobzhansky-Muller incompatibilities), or haplotypes loaded with fewer deleterious mutations. Having escaped one barrier, however, these variants can be trapped or delayed at the next barrier, confining the introgression locally. These results shed light on the decay of species barriers during phases of contact."}],"date_created":"2023-05-23T16:48:27Z","_id":"13073","year":"2020","ddc":["570"],"date_published":"2020-09-22T00:00:00Z","doi":"10.5061/DRYAD.R4XGXD29N","tmp":{"image":"/images/cc_0.png","name":"Creative Commons Public Domain Dedication (CC0 1.0)","short":"CC0 (1.0)","legal_code_url":"https://creativecommons.org/publicdomain/zero/1.0/legalcode"},"status":"public","title":"How do species barriers decay? concordance and local introgression in mosaic hybrid zones of mussels","day":"22","oa":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","type":"research_data_reference","citation":{"chicago":"Simon, Alexis, Christelle Fraisse, Tahani El Ayari, Cathy Liautard-Haag, Petr Strelkov, John Welch, and Nicolas Bierne. “How Do Species Barriers Decay? Concordance and Local Introgression in Mosaic Hybrid Zones of Mussels.” Dryad, 2020. https://doi.org/10.5061/DRYAD.R4XGXD29N.","ista":"Simon A, Fraisse C, El Ayari T, Liautard-Haag C, Strelkov P, Welch J, Bierne N. 2020. How do species barriers decay? concordance and local introgression in mosaic hybrid zones of mussels, Dryad, 10.5061/DRYAD.R4XGXD29N.","mla":"Simon, Alexis, et al. How Do Species Barriers Decay? Concordance and Local Introgression in Mosaic Hybrid Zones of Mussels. Dryad, 2020, doi:10.5061/DRYAD.R4XGXD29N.","ama":"Simon A, Fraisse C, El Ayari T, et al. How do species barriers decay? concordance and local introgression in mosaic hybrid zones of mussels. 2020. doi:10.5061/DRYAD.R4XGXD29N","ieee":"A. Simon et al., “How do species barriers decay? concordance and local introgression in mosaic hybrid zones of mussels.” Dryad, 2020.","apa":"Simon, A., Fraisse, C., El Ayari, T., Liautard-Haag, C., Strelkov, P., Welch, J., & Bierne, N. (2020). How do species barriers decay? concordance and local introgression in mosaic hybrid zones of mussels. Dryad. https://doi.org/10.5061/DRYAD.R4XGXD29N","short":"A. Simon, C. Fraisse, T. El Ayari, C. Liautard-Haag, P. Strelkov, J. Welch, N. Bierne, (2020)."},"date_updated":"2023-08-04T11:04:11Z","author":[{"last_name":"Simon","first_name":"Alexis","full_name":"Simon, Alexis"},{"last_name":"Fraisse","first_name":"Christelle","id":"32DF5794-F248-11E8-B48F-1D18A9856A87","full_name":"Fraisse, Christelle","orcid":"0000-0001-8441-5075"},{"full_name":"El Ayari, Tahani","last_name":"El Ayari","first_name":"Tahani"},{"full_name":"Liautard-Haag, Cathy","first_name":"Cathy","last_name":"Liautard-Haag"},{"full_name":"Strelkov, Petr","first_name":"Petr","last_name":"Strelkov"},{"last_name":"Welch","first_name":"John","full_name":"Welch, John"},{"full_name":"Bierne, Nicolas","first_name":"Nicolas","last_name":"Bierne"}]},{"scopus_import":"1","page":"3174-3182","arxiv":1,"main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2001.03342","open_access":"1"}],"month":"01","publisher":"Royal Society of Chemistry","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":12,"type":"journal_article","extern":"1","intvolume":" 12","status":"public","language":[{"iso":"eng"}],"date_published":"2020-01-10T00:00:00Z","doi":"10.1039/C9NR08578E","_id":"13341","year":"2020","date_created":"2023-08-01T08:27:12Z","article_processing_charge":"No","oa_version":"Preprint","quality_controlled":"1","abstract":[{"text":"Scanning nanoscale superconducting quantum interference devices (nanoSQUIDs)\r\nare of growing interest for highly sensitive quantitative imaging of magnetic,\r\nspintronic, and transport properties of low-dimensional systems. Utilizing\r\nspecifically designed grooved quartz capillaries pulled into a sharp pipette,\r\nwe have fabricated the smallest SQUID-on-tip (SOT) devices with effective\r\ndiameters down to 39 nm. Integration of a resistive shunt in close proximity to\r\nthe pipette apex combined with self-aligned deposition of In and Sn, have\r\nresulted in SOT with a flux noise of 42 n$\\Phi_0$Hz$^{-1/2}$, yielding a record\r\nlow spin noise of 0.29 $\\mu_B$Hz$^{-1/2}$. In addition, the new SOTs function\r\nat sub-Kelvin temperatures and in high magnetic fields of over 2.5 T.\r\nIntegrating the SOTs into a scanning probe microscope allowed us to image the\r\nstray field of a single Fe$_3$O$_4$ nanocube at 300 mK. Our results show that\r\nthe easy magnetization axis direction undergoes a transition from the (111)\r\ndirection at room temperature to an in-plane orientation, which could be\r\nattributed to the Verwey phase transition in Fe$_3$O$_4$.","lang":"eng"}],"publication_status":"published","article_type":"original","oa":1,"publication":"Nanoscale","publication_identifier":{"eissn":["2040-3372"]},"day":"10","date_updated":"2023-08-02T09:35:52Z","author":[{"first_name":"Y.","last_name":"Anahory","full_name":"Anahory, Y."},{"full_name":"Naren, H. R.","first_name":"H. R.","last_name":"Naren"},{"full_name":"Lachman, E. O.","first_name":"E. O.","last_name":"Lachman"},{"first_name":"S. Buhbut","last_name":"Sinai","full_name":"Sinai, S. Buhbut"},{"full_name":"Uri, A.","first_name":"A.","last_name":"Uri"},{"full_name":"Embon, L.","first_name":"L.","last_name":"Embon"},{"first_name":"E.","last_name":"Yaakobi","full_name":"Yaakobi, E."},{"last_name":"Myasoedov","first_name":"Y.","full_name":"Myasoedov, Y."},{"full_name":"Huber, M. E.","first_name":"M. E.","last_name":"Huber"},{"id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","full_name":"Klajn, Rafal","last_name":"Klajn","first_name":"Rafal"},{"full_name":"Zeldov, E.","last_name":"Zeldov","first_name":"E."}],"citation":{"mla":"Anahory, Y., et al. “SQUID-on-Tip with Single-Electron Spin Sensitivity for High-Field and Ultra-Low Temperature Nanomagnetic Imaging.” Nanoscale, vol. 12, no. 5, Royal Society of Chemistry, 2020, pp. 3174–82, doi:10.1039/C9NR08578E.","ieee":"Y. Anahory et al., “SQUID-on-tip with single-electron spin sensitivity for high-field and ultra-low temperature nanomagnetic imaging,” Nanoscale, vol. 12, no. 5. Royal Society of Chemistry, pp. 3174–3182, 2020.","ama":"Anahory Y, Naren HR, Lachman EO, et al. SQUID-on-tip with single-electron spin sensitivity for high-field and ultra-low temperature nanomagnetic imaging. Nanoscale. 2020;12(5):3174-3182. doi:10.1039/C9NR08578E","apa":"Anahory, Y., Naren, H. R., Lachman, E. O., Sinai, S. B., Uri, A., Embon, L., … Zeldov, E. (2020). SQUID-on-tip with single-electron spin sensitivity for high-field and ultra-low temperature nanomagnetic imaging. Nanoscale. Royal Society of Chemistry. https://doi.org/10.1039/C9NR08578E","chicago":"Anahory, Y., H. R. Naren, E. O. Lachman, S. Buhbut Sinai, A. Uri, L. Embon, E. Yaakobi, et al. “SQUID-on-Tip with Single-Electron Spin Sensitivity for High-Field and Ultra-Low Temperature Nanomagnetic Imaging.” Nanoscale. Royal Society of Chemistry, 2020. https://doi.org/10.1039/C9NR08578E.","ista":"Anahory Y, Naren HR, Lachman EO, Sinai SB, Uri A, Embon L, Yaakobi E, Myasoedov Y, Huber ME, Klajn R, Zeldov E. 2020. SQUID-on-tip with single-electron spin sensitivity for high-field and ultra-low temperature nanomagnetic imaging. Nanoscale. 12(5), 3174–3182.","short":"Y. Anahory, H.R. Naren, E.O. Lachman, S.B. Sinai, A. Uri, L. Embon, E. Yaakobi, Y. Myasoedov, M.E. Huber, R. Klajn, E. Zeldov, Nanoscale 12 (2020) 3174–3182."},"issue":"5","title":"SQUID-on-tip with single-electron spin sensitivity for high-field and ultra-low temperature nanomagnetic imaging","external_id":{"arxiv":["2001.03342"]}},{"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1021/acs.accounts.0c00434"}],"publisher":"American Chemical Society","month":"11","scopus_import":"1","page":"2600-2610","intvolume":" 53","extern":"1","doi":"10.1021/acs.accounts.0c00434","date_published":"2020-11-17T00:00:00Z","language":[{"iso":"eng"}],"status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","type":"journal_article","volume":53,"quality_controlled":"1","oa_version":"Published Version","keyword":["General Medicine","General Chemistry"],"article_processing_charge":"No","publication_status":"published","article_type":"original","abstract":[{"text":"In nature, light is harvested by photoactive proteins to drive a range of biological processes, including photosynthesis, phototaxis, vision, and ultimately life. Bacteriorhodopsin, for example, is a protein embedded within archaeal cell membranes that binds the chromophore retinal within its hydrophobic pocket. Exposure to light triggers regioselective photoisomerization of the confined retinal, which in turn initiates a cascade of conformational changes within the protein, triggering proton flux against the concentration gradient, providing the microorganisms with the energy to live. We are inspired by these functions in nature to harness light energy using synthetic photoswitches under confinement. Like retinal, synthetic photoswitches require some degree of conformational flexibility to isomerize. In nature, the conformational change associated with retinal isomerization is accommodated by the structural flexibility of the opsin host, yet it results in steric communication between the chromophore and the protein. Similarly, we strive to design systems wherein isomerization of confined photoswitches results in steric communication between a photoswitch and its confining environment. To achieve this aim, a balance must be struck between molecular crowding and conformational freedom under confinement: too much crowding prevents switching, whereas too much freedom resembles switching of isolated molecules in solution, preventing communication.\r\n\r\nIn this Account, we discuss five classes of synthetic light-switchable compounds—diarylethenes, anthracenes, azobenzenes, spiropyrans, and donor–acceptor Stenhouse adducts—comparing their behaviors under confinement and in solution. The environments employed to confine these photoswitches are diverse, ranging from planar surfaces to nanosized cavities within coordination cages, nanoporous frameworks, and nanoparticle aggregates. The trends that emerge are primarily dependent on the nature of the photoswitch and not on the material used for confinement. In general, we find that photoswitches requiring less conformational freedom for switching are, as expected, more straightforward to isomerize reversibly under confinement. Because these compounds undergo only small structural changes upon isomerization, however, switching does not propagate into communication with their environment. Conversely, photoswitches that require more conformational freedom are more challenging to switch under confinement but also can influence system-wide behavior.\r\n\r\nAlthough we are primarily interested in the effects of geometric constraints on photoswitching under confinement, additional effects inevitably emerge when a compound is removed from solution and placed within a new, more crowded environment. For instance, we have found that compounds that convert to zwitterionic isomers upon light irradiation often experience stabilization of these forms under confinement. This effect results from the mutual stabilization of zwitterions that are brought into close proximity on surfaces or within cavities. Furthermore, photoswitches can experience preorganization under confinement, influencing the selectivity and efficiency of their photoreactions. Because intermolecular interactions arising from confinement cannot be considered independently from the effects of geometric constraints, we describe all confinement effects concurrently throughout this Account.","lang":"eng"}],"pmid":1,"date_created":"2023-08-01T09:35:50Z","year":"2020","_id":"13361","issue":"11","external_id":{"pmid":["32969638"]},"title":"Molecular photoswitching in confined spaces","day":"17","publication_identifier":{"eissn":["1520-4898"],"issn":["0001-4842"]},"publication":"Accounts of Chemical Research","oa":1,"author":[{"last_name":"Grommet","first_name":"Angela B.","full_name":"Grommet, Angela B."},{"full_name":"Lee, Lucia M.","first_name":"Lucia M.","last_name":"Lee"},{"last_name":"Klajn","first_name":"Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","full_name":"Klajn, Rafal"}],"citation":{"short":"A.B. Grommet, L.M. Lee, R. Klajn, Accounts of Chemical Research 53 (2020) 2600–2610.","chicago":"Grommet, Angela B., Lucia M. Lee, and Rafal Klajn. “Molecular Photoswitching in Confined Spaces.” Accounts of Chemical Research. American Chemical Society, 2020. https://doi.org/10.1021/acs.accounts.0c00434.","ista":"Grommet AB, Lee LM, Klajn R. 2020. Molecular photoswitching in confined spaces. Accounts of Chemical Research. 53(11), 2600–2610.","mla":"Grommet, Angela B., et al. “Molecular Photoswitching in Confined Spaces.” Accounts of Chemical Research, vol. 53, no. 11, American Chemical Society, 2020, pp. 2600–10, doi:10.1021/acs.accounts.0c00434.","ieee":"A. B. Grommet, L. M. Lee, and R. Klajn, “Molecular photoswitching in confined spaces,” Accounts of Chemical Research, vol. 53, no. 11. American Chemical Society, pp. 2600–2610, 2020.","ama":"Grommet AB, Lee LM, Klajn R. Molecular photoswitching in confined spaces. Accounts of Chemical Research. 2020;53(11):2600-2610. doi:10.1021/acs.accounts.0c00434","apa":"Grommet, A. B., Lee, L. M., & Klajn, R. (2020). Molecular photoswitching in confined spaces. Accounts of Chemical Research. American Chemical Society. https://doi.org/10.1021/acs.accounts.0c00434"},"date_updated":"2023-08-07T10:06:46Z"},{"external_id":{"pmid":["33006898"]},"title":"Modulating the optical properties of BODIPY dyes by noncovalent dimerization within a flexible coordination cage","issue":"41","date_updated":"2023-08-07T10:09:54Z","author":[{"full_name":"Gemen, Julius","first_name":"Julius","last_name":"Gemen"},{"full_name":"Ahrens, Johannes","last_name":"Ahrens","first_name":"Johannes"},{"full_name":"Shimon, Linda J. W.","last_name":"Shimon","first_name":"Linda J. W."},{"full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","first_name":"Rafal","last_name":"Klajn"}],"citation":{"short":"J. Gemen, J. Ahrens, L.J.W. Shimon, R. Klajn, Journal of the American Chemical Society 142 (2020) 17721–17729.","chicago":"Gemen, Julius, Johannes Ahrens, Linda J. W. Shimon, and Rafal Klajn. “Modulating the Optical Properties of BODIPY Dyes by Noncovalent Dimerization within a Flexible Coordination Cage.” Journal of the American Chemical Society. American Chemical Society, 2020. https://doi.org/10.1021/jacs.0c08589.","ista":"Gemen J, Ahrens J, Shimon LJW, Klajn R. 2020. Modulating the optical properties of BODIPY dyes by noncovalent dimerization within a flexible coordination cage. Journal of the American Chemical Society. 142(41), 17721–17729.","mla":"Gemen, Julius, et al. “Modulating the Optical Properties of BODIPY Dyes by Noncovalent Dimerization within a Flexible Coordination Cage.” Journal of the American Chemical Society, vol. 142, no. 41, American Chemical Society, 2020, pp. 17721–29, doi:10.1021/jacs.0c08589.","ieee":"J. Gemen, J. Ahrens, L. J. W. Shimon, and R. Klajn, “Modulating the optical properties of BODIPY dyes by noncovalent dimerization within a flexible coordination cage,” Journal of the American Chemical Society, vol. 142, no. 41. American Chemical Society, pp. 17721–17729, 2020.","apa":"Gemen, J., Ahrens, J., Shimon, L. J. W., & Klajn, R. (2020). Modulating the optical properties of BODIPY dyes by noncovalent dimerization within a flexible coordination cage. Journal of the American Chemical Society. American Chemical Society. https://doi.org/10.1021/jacs.0c08589","ama":"Gemen J, Ahrens J, Shimon LJW, Klajn R. Modulating the optical properties of BODIPY dyes by noncovalent dimerization within a flexible coordination cage. Journal of the American Chemical Society. 2020;142(41):17721-17729. doi:10.1021/jacs.0c08589"},"day":"04","publication_identifier":{"eissn":["1520-5126"],"issn":["0002-7863"]},"publication":"Journal of the American Chemical Society","oa":1,"publication_status":"published","article_type":"original","abstract":[{"text":"Aggregation of organic molecules can drastically affect their physicochemical properties. For instance, the optical properties of BODIPY dyes are inherently related to the degree of aggregation and the mutual orientation of BODIPY units within these aggregates. Whereas the noncovalent aggregation of various BODIPY dyes has been studied in diverse media, the ill-defined nature of these aggregates has made it difficult to elucidate the structure–property relationships. Here, we studied the encapsulation of three structurally simple BODIPY derivatives within the hydrophobic cavity of a water-soluble, flexible PdII6L4 coordination cage. The cavity size allowed for the selective encapsulation of two dye molecules, irrespective of the substitution pattern on the BODIPY core. Working with a model, a pentamethyl-substituted derivative, we found that the mutual orientation of two BODIPY units in the cage’s cavity was remarkably similar to that in the crystalline state of the free dye, allowing us to isolate and characterize the smallest possible noncovalent H-type BODIPY aggregate, namely, an H-dimer. Interestingly, a CF3-substituted BODIPY, known for forming J-type aggregates, was also encapsulated as an H-dimer. Taking advantage of the dynamic nature of encapsulation, we developed a system in which reversible switching between H- and J-aggregates can be induced for multiple cycles simply by addition and subsequent destruction of the cage. We expect that the ability to rapidly and reversibly manipulate the optical properties of supramolecular inclusion complexes in aqueous media will open up avenues for developing detection systems that operate within biological environments.","lang":"eng"}],"quality_controlled":"1","oa_version":"Published Version","keyword":["Colloid and Surface Chemistry","Biochemistry","General Chemistry","Catalysis"],"article_processing_charge":"No","date_created":"2023-08-01T09:36:10Z","pmid":1,"year":"2020","_id":"13362","doi":"10.1021/jacs.0c08589","date_published":"2020-10-04T00:00:00Z","language":[{"iso":"eng"}],"status":"public","intvolume":" 142","extern":"1","type":"journal_article","volume":142,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publisher":"American Chemical Society","month":"10","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1021/jacs.0c08589"}],"page":"17721-17729","scopus_import":"1"},{"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":16,"type":"journal_article","extern":"1","intvolume":" 16","status":"public","language":[{"iso":"eng"}],"date_published":"2020-08-11T00:00:00Z","doi":"10.1002/smll.202002135","scopus_import":"1","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1002/smll.202002135"}],"month":"08","publisher":"Wiley","oa":1,"publication_identifier":{"issn":["1613-6810"],"eissn":["1613-6829"]},"publication":"Small","day":"11","citation":{"short":"S. Moreno, P. Sharan, J. Engelke, H. Gumz, S. Boye, U. Oertel, P. Wang, S. Banerjee, R. Klajn, B. Voit, A. Lederer, D. Appelhans, Small 16 (2020).","mla":"Moreno, Silvia, et al. “Light‐driven Proton Transfer for Cyclic and Temporal Switching of Enzymatic Nanoreactors.” Small, vol. 16, no. 37, 2002135, Wiley, 2020, doi:10.1002/smll.202002135.","apa":"Moreno, S., Sharan, P., Engelke, J., Gumz, H., Boye, S., Oertel, U., … Appelhans, D. (2020). Light‐driven proton transfer for cyclic and temporal switching of enzymatic nanoreactors. Small. Wiley. https://doi.org/10.1002/smll.202002135","ieee":"S. Moreno et al., “Light‐driven proton transfer for cyclic and temporal switching of enzymatic nanoreactors,” Small, vol. 16, no. 37. Wiley, 2020.","ama":"Moreno S, Sharan P, Engelke J, et al. Light‐driven proton transfer for cyclic and temporal switching of enzymatic nanoreactors. Small. 2020;16(37). doi:10.1002/smll.202002135","chicago":"Moreno, Silvia, Priyanka Sharan, Johanna Engelke, Hannes Gumz, Susanne Boye, Ulrich Oertel, Peng Wang, et al. “Light‐driven Proton Transfer for Cyclic and Temporal Switching of Enzymatic Nanoreactors.” Small. Wiley, 2020. https://doi.org/10.1002/smll.202002135.","ista":"Moreno S, Sharan P, Engelke J, Gumz H, Boye S, Oertel U, Wang P, Banerjee S, Klajn R, Voit B, Lederer A, Appelhans D. 2020. Light‐driven proton transfer for cyclic and temporal switching of enzymatic nanoreactors. Small. 16(37), 2002135."},"author":[{"last_name":"Moreno","first_name":"Silvia","full_name":"Moreno, Silvia"},{"first_name":"Priyanka","last_name":"Sharan","full_name":"Sharan, Priyanka"},{"full_name":"Engelke, Johanna","last_name":"Engelke","first_name":"Johanna"},{"full_name":"Gumz, Hannes","last_name":"Gumz","first_name":"Hannes"},{"full_name":"Boye, Susanne","last_name":"Boye","first_name":"Susanne"},{"last_name":"Oertel","first_name":"Ulrich","full_name":"Oertel, Ulrich"},{"last_name":"Wang","first_name":"Peng","full_name":"Wang, Peng"},{"first_name":"Susanta","last_name":"Banerjee","full_name":"Banerjee, Susanta"},{"last_name":"Klajn","first_name":"Rafal","full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b"},{"first_name":"Brigitte","last_name":"Voit","full_name":"Voit, Brigitte"},{"last_name":"Lederer","first_name":"Albena","full_name":"Lederer, Albena"},{"last_name":"Appelhans","first_name":"Dietmar","full_name":"Appelhans, Dietmar"}],"date_updated":"2023-08-07T10:11:41Z","article_number":"2002135","issue":"37","title":"Light‐driven proton transfer for cyclic and temporal switching of enzymatic nanoreactors","external_id":{"pmid":["32783385"]},"_id":"13363","year":"2020","date_created":"2023-08-01T09:36:48Z","pmid":1,"article_processing_charge":"No","keyword":["Biomaterials","Biotechnology","General Materials Science","General Chemistry"],"oa_version":"Published Version","quality_controlled":"1","abstract":[{"lang":"eng","text":"Temporal activation of biological processes by visible light and subsequent return to an inactive state in the absence of light is an essential characteristic of photoreceptor cells. Inspired by these phenomena, light-responsive materials are very attractive due to the high spatiotemporal control of light irradiation, with light being able to precisely orchestrate processes repeatedly over many cycles. Herein, it is reported that light-driven proton transfer triggered by a merocyanine-based photoacid can be used to modulate the permeability of pH-responsive polymersomes through cyclic, temporally controlled protonation and deprotonation of the polymersome membrane. The membranes can undergo repeated light-driven swelling–contraction cycles without losing functional effectiveness. When applied to enzyme loaded-nanoreactors, this membrane responsiveness is used for the reversible control of enzymatic reactions. This combination of the merocyanine-based photoacid and pH-switchable nanoreactors results in rapidly responding and versatile supramolecular systems successfully used to switch enzymatic reactions ON and OFF on demand."}],"publication_status":"published","article_type":"original"}]