---
_id: '12582'
abstract:
- lang: eng
  text: Supraglacial debris covers 7% of mountain glacier area globally and generally
    reduces glacier surface melt. Enhanced energy absorption at ice cliffs and supraglacial
    ponds scattered across the debris surface leads these features to contribute disproportionately
    to glacier-wide ablation. However, the degree to which cliffs and ponds actually
    increase melt rates remains unclear, as these features have only been studied
    in a detailed manner for selected locations, almost exclusively in High Mountain
    Asia. In this study we model the surface energy balance for debris-covered ice,
    ice cliffs, and supraglacial ponds with a set of automatic weather station records
    representing the global prevalence of debris-covered glacier ice. We generate
    5000 random sets of values for physical parameters using probability distributions
    derived from literature, which we use to investigate relative melt rates and to
    isolate the melt responses of debris, cliffs and ponds to the site-specific meteorological
    forcing. Modelled sub-debris melt rates are primarily controlled by debris thickness
    and thermal conductivity. At a reference thickness of 0.1 m, sub-debris melt rates
    vary considerably, differing by up to a factor of four between sites, mainly attributable
    to air temperature differences. We find that melt rates for ice cliffs are consistently
    2–3× the melt rate for clean glacier ice, but this melt enhancement decays with
    increasing clean ice melt rates. Energy absorption at supraglacial ponds is dominated
    by latent heat exchange and is therefore highly sensitive to wind speed and relative
    humidity, but is generally less than for clean ice. Our results provide reference
    melt enhancement factors for melt modelling of debris-covered glacier sites, globally,
    while highlighting the need for direct measurement of debris-covered glacier surface
    characteristics, physical parameters, and local meteorological conditions at a
    variety of sites around the world.
article_number: '064004'
article_processing_charge: No
article_type: letter_note
author:
- first_name: E S
  full_name: Miles, E S
  last_name: Miles
- first_name: J F
  full_name: Steiner, J F
  last_name: Steiner
- first_name: P
  full_name: Buri, P
  last_name: Buri
- first_name: W W
  full_name: Immerzeel, W W
  last_name: Immerzeel
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
citation:
  ama: Miles ES, Steiner JF, Buri P, Immerzeel WW, Pellicciotti F. Controls on the
    relative melt rates of debris-covered glacier surfaces. <i>Environmental Research
    Letters</i>. 2022;17(6). doi:<a href="https://doi.org/10.1088/1748-9326/ac6966">10.1088/1748-9326/ac6966</a>
  apa: Miles, E. S., Steiner, J. F., Buri, P., Immerzeel, W. W., &#38; Pellicciotti,
    F. (2022). Controls on the relative melt rates of debris-covered glacier surfaces.
    <i>Environmental Research Letters</i>. IOP Publishing. <a href="https://doi.org/10.1088/1748-9326/ac6966">https://doi.org/10.1088/1748-9326/ac6966</a>
  chicago: Miles, E S, J F Steiner, P Buri, W W Immerzeel, and Francesca Pellicciotti.
    “Controls on the Relative Melt Rates of Debris-Covered Glacier Surfaces.” <i>Environmental
    Research Letters</i>. IOP Publishing, 2022. <a href="https://doi.org/10.1088/1748-9326/ac6966">https://doi.org/10.1088/1748-9326/ac6966</a>.
  ieee: E. S. Miles, J. F. Steiner, P. Buri, W. W. Immerzeel, and F. Pellicciotti,
    “Controls on the relative melt rates of debris-covered glacier surfaces,” <i>Environmental
    Research Letters</i>, vol. 17, no. 6. IOP Publishing, 2022.
  ista: Miles ES, Steiner JF, Buri P, Immerzeel WW, Pellicciotti F. 2022. Controls
    on the relative melt rates of debris-covered glacier surfaces. Environmental Research
    Letters. 17(6), 064004.
  mla: Miles, E. S., et al. “Controls on the Relative Melt Rates of Debris-Covered
    Glacier Surfaces.” <i>Environmental Research Letters</i>, vol. 17, no. 6, 064004,
    IOP Publishing, 2022, doi:<a href="https://doi.org/10.1088/1748-9326/ac6966">10.1088/1748-9326/ac6966</a>.
  short: E.S. Miles, J.F. Steiner, P. Buri, W.W. Immerzeel, F. Pellicciotti, Environmental
    Research Letters 17 (2022).
date_created: 2023-02-20T08:10:37Z
date_published: 2022-06-01T00:00:00Z
date_updated: 2023-02-28T13:34:25Z
day: '01'
doi: 10.1088/1748-9326/ac6966
extern: '1'
intvolume: '        17'
issue: '6'
keyword:
- Public Health
- Environmental and Occupational Health
- General Environmental Science
- Renewable Energy
- Sustainability and the Environment
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1088/1748-9326/ac6966
month: '06'
oa: 1
oa_version: Published Version
publication: Environmental Research Letters
publication_identifier:
  issn:
  - 1748-9326
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Controls on the relative melt rates of debris-covered glacier surfaces
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 17
year: '2022'
...
---
_id: '12660'
abstract:
- lang: eng
  text: 'We present Cross-Client Label Propagation(XCLP), a new method for transductive
    federated learning. XCLP estimates a data graph jointly from the data of multiple
    clients and computes labels for the unlabeled data by propagating label information
    across the graph. To avoid clients having to share their data with anyone, XCLP
    employs two cryptographically secure protocols: secure Hamming distance computation
    and secure summation. We demonstrate two distinct applications of XCLP within
    federated learning. In the first, we use it in a one-shot way to predict labels
    for unseen test points. In the second, we use it to repeatedly pseudo-label unlabeled
    training data in a federated semi-supervised setting. Experiments on both real
    federated and standard benchmark datasets show that in both applications XCLP
    achieves higher classification accuracy than alternative approaches.'
article_number: '2210.06434'
article_processing_charge: No
arxiv: 1
author:
- first_name: Jonathan A
  full_name: Scott, Jonathan A
  id: e499926b-f6e0-11ea-865d-9c63db0031e8
  last_name: Scott
- first_name: Michelle X
  full_name: Yeo, Michelle X
  id: 2D82B818-F248-11E8-B48F-1D18A9856A87
  last_name: Yeo
- first_name: Christoph
  full_name: Lampert, Christoph
  id: 40C20FD2-F248-11E8-B48F-1D18A9856A87
  last_name: Lampert
  orcid: 0000-0001-8622-7887
citation:
  ama: Scott JA, Yeo MX, Lampert C. Cross-client Label Propagation for transductive
    federated learning. <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/arXiv.2210.06434">10.48550/arXiv.2210.06434</a>
  apa: Scott, J. A., Yeo, M. X., &#38; Lampert, C. (n.d.). Cross-client Label Propagation
    for transductive federated learning. <i>arXiv</i>. <a href="https://doi.org/10.48550/arXiv.2210.06434">https://doi.org/10.48550/arXiv.2210.06434</a>
  chicago: Scott, Jonathan A, Michelle X Yeo, and Christoph Lampert. “Cross-Client
    Label Propagation for Transductive Federated Learning.” <i>ArXiv</i>, n.d. <a
    href="https://doi.org/10.48550/arXiv.2210.06434">https://doi.org/10.48550/arXiv.2210.06434</a>.
  ieee: J. A. Scott, M. X. Yeo, and C. Lampert, “Cross-client Label Propagation for
    transductive federated learning,” <i>arXiv</i>. .
  ista: Scott JA, Yeo MX, Lampert C. Cross-client Label Propagation for transductive
    federated learning. arXiv, 2210.06434.
  mla: Scott, Jonathan A., et al. “Cross-Client Label Propagation for Transductive
    Federated Learning.” <i>ArXiv</i>, 2210.06434, doi:<a href="https://doi.org/10.48550/arXiv.2210.06434">10.48550/arXiv.2210.06434</a>.
  short: J.A. Scott, M.X. Yeo, C. Lampert, ArXiv (n.d.).
date_created: 2023-02-20T08:21:50Z
date_published: 2022-10-12T00:00:00Z
date_updated: 2023-02-21T08:20:18Z
day: '12'
ddc:
- '004'
department:
- _id: ChLa
doi: 10.48550/arXiv.2210.06434
external_id:
  arxiv:
  - '2210.06434'
file:
- access_level: open_access
  checksum: 7ab20543fd4393f14fb857ce2e4f03c6
  content_type: application/pdf
  creator: chl
  date_created: 2023-02-20T08:21:35Z
  date_updated: 2023-02-20T08:21:35Z
  file_id: '12661'
  file_name: 2210.06434.pdf
  file_size: 291893
  relation: main_file
  success: 1
file_date_updated: 2023-02-20T08:21:35Z
has_accepted_license: '1'
language:
- iso: eng
month: '10'
oa: 1
oa_version: Preprint
publication: arXiv
publication_status: submitted
status: public
title: Cross-client Label Propagation for transductive federated learning
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '12662'
abstract:
- lang: eng
  text: 'Modern machine learning tasks often require considering not just one but
    multiple objectives. For example, besides the prediction quality, this could be
    the efficiency, robustness or fairness of the learned models, or any of their
    combinations. Multi-objective learning offers a natural framework for handling
    such problems without having to commit to early trade-offs. Surprisingly, statistical
    learning theory so far offers almost no insight into the generalization properties
    of multi-objective learning. In this work, we make first steps to fill this gap:
    we establish foundational generalization bounds for the multi-objective setting
    as well as generalization and excess bounds for learning with scalarizations.
    We also provide the first theoretical analysis of the relation between the Pareto-optimal
    sets of the true objectives and the Pareto-optimal sets of their empirical approximations
    from training data. In particular, we show a surprising asymmetry: all Pareto-optimal
    solutions can be approximated by empirically Pareto-optimal ones, but not vice
    versa.'
article_number: '2208.13499'
article_processing_charge: No
arxiv: 1
author:
- first_name: Peter
  full_name: Súkeník, Peter
  id: d64d6a8d-eb8e-11eb-b029-96fd216dec3c
  last_name: Súkeník
- first_name: Christoph
  full_name: Lampert, Christoph
  id: 40C20FD2-F248-11E8-B48F-1D18A9856A87
  last_name: Lampert
  orcid: 0000-0001-8622-7887
citation:
  ama: Súkeník P, Lampert C. Generalization in Multi-objective machine learning. <i>arXiv</i>.
    doi:<a href="https://doi.org/10.48550/arXiv.2208.13499">10.48550/arXiv.2208.13499</a>
  apa: Súkeník, P., &#38; Lampert, C. (n.d.). Generalization in Multi-objective machine
    learning. <i>arXiv</i>. <a href="https://doi.org/10.48550/arXiv.2208.13499">https://doi.org/10.48550/arXiv.2208.13499</a>
  chicago: Súkeník, Peter, and Christoph Lampert. “Generalization in Multi-Objective
    Machine Learning.” <i>ArXiv</i>, n.d. <a href="https://doi.org/10.48550/arXiv.2208.13499">https://doi.org/10.48550/arXiv.2208.13499</a>.
  ieee: P. Súkeník and C. Lampert, “Generalization in Multi-objective machine learning,”
    <i>arXiv</i>. .
  ista: Súkeník P, Lampert C. Generalization in Multi-objective machine learning.
    arXiv, 2208.13499.
  mla: Súkeník, Peter, and Christoph Lampert. “Generalization in Multi-Objective Machine
    Learning.” <i>ArXiv</i>, 2208.13499, doi:<a href="https://doi.org/10.48550/arXiv.2208.13499">10.48550/arXiv.2208.13499</a>.
  short: P. Súkeník, C. Lampert, ArXiv (n.d.).
date_created: 2023-02-20T08:23:06Z
date_published: 2022-08-29T00:00:00Z
date_updated: 2023-02-21T08:24:55Z
day: '29'
ddc:
- '004'
department:
- _id: ChLa
doi: 10.48550/arXiv.2208.13499
external_id:
  arxiv:
  - '2208.13499'
has_accepted_license: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: ' https://doi.org/10.48550/arXiv.2208.13499'
month: '08'
oa: 1
oa_version: Preprint
publication: arXiv
publication_status: submitted
status: public
title: Generalization in Multi-objective machine learning
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '12664'
abstract:
- lang: eng
  text: Randomized smoothing is currently considered the state-of-the-art method to
    obtain certifiably robust classifiers. Despite its remarkable performance, the
    method is associated with various serious problems such as “certified accuracy
    waterfalls”, certification vs. accuracy trade-off, or even fairness issues. Input-dependent
    smoothing approaches have been proposed with intention of overcoming these flaws.
    However, we demonstrate that these methods lack formal guarantees and so the resulting
    certificates are not justified. We show that in general, the input-dependent smoothing
    suffers from the curse of dimensionality, forcing the variance function to have
    low semi-elasticity. On the other hand, we provide a theoretical and practical
    framework that enables the usage of input-dependent smoothing even in the presence
    of the curse of dimensionality, under strict restrictions. We present one concrete
    design of the smoothing variance function and test it on CIFAR10 and MNIST. Our
    design mitigates some of the problems of classical smoothing and is formally underlined,
    yet further improvement of the design is still necessary.
article_processing_charge: No
arxiv: 1
author:
- first_name: Peter
  full_name: Súkeník, Peter
  id: d64d6a8d-eb8e-11eb-b029-96fd216dec3c
  last_name: Súkeník
- first_name: Aleksei
  full_name: Kuvshinov, Aleksei
  last_name: Kuvshinov
- first_name: Stephan
  full_name: Günnemann, Stephan
  last_name: Günnemann
citation:
  ama: 'Súkeník P, Kuvshinov A, Günnemann S. Intriguing properties of input-dependent
    randomized smoothing. In: <i>Proceedings of the 39th International Conference
    on Machine Learning</i>. Vol 162. ML Research Press; 2022:20697-20743.'
  apa: 'Súkeník, P., Kuvshinov, A., &#38; Günnemann, S. (2022). Intriguing properties
    of input-dependent randomized smoothing. In <i>Proceedings of the 39th International
    Conference on Machine Learning</i> (Vol. 162, pp. 20697–20743). Baltimore, MD,
    United States: ML Research Press.'
  chicago: Súkeník, Peter, Aleksei Kuvshinov, and Stephan Günnemann. “Intriguing Properties
    of Input-Dependent Randomized Smoothing.” In <i>Proceedings of the 39th International
    Conference on Machine Learning</i>, 162:20697–743. ML Research Press, 2022.
  ieee: P. Súkeník, A. Kuvshinov, and S. Günnemann, “Intriguing properties of input-dependent
    randomized smoothing,” in <i>Proceedings of the 39th International Conference
    on Machine Learning</i>, Baltimore, MD, United States, 2022, vol. 162, pp. 20697–20743.
  ista: Súkeník P, Kuvshinov A, Günnemann S. 2022. Intriguing properties of input-dependent
    randomized smoothing. Proceedings of the 39th International Conference on Machine
    Learning. International Conference on Machine Learning vol. 162, 20697–20743.
  mla: Súkeník, Peter, et al. “Intriguing Properties of Input-Dependent Randomized
    Smoothing.” <i>Proceedings of the 39th International Conference on Machine Learning</i>,
    vol. 162, ML Research Press, 2022, pp. 20697–743.
  short: P. Súkeník, A. Kuvshinov, S. Günnemann, in:, Proceedings of the 39th International
    Conference on Machine Learning, ML Research Press, 2022, pp. 20697–20743.
conference:
  end_date: 2022-07-23
  location: Baltimore, MD, United States
  name: International Conference on Machine Learning
  start_date: 2022-07-17
date_created: 2023-02-20T08:30:21Z
date_published: 2022-07-19T00:00:00Z
date_updated: 2023-02-23T10:03:47Z
day: '19'
ddc:
- '004'
external_id:
  arxiv:
  - '2110.05365'
file:
- access_level: open_access
  checksum: ab8695b1e24fb4fef4f1f9cd63ca8238
  content_type: application/pdf
  creator: chl
  date_created: 2023-02-20T08:30:10Z
  date_updated: 2023-02-20T08:30:10Z
  file_id: '12665'
  file_name: sukeni-k22a.pdf
  file_size: 8470811
  relation: main_file
  success: 1
file_date_updated: 2023-02-20T08:30:10Z
has_accepted_license: '1'
intvolume: '       162'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
page: 20697-20743
publication: Proceedings of the 39th International Conference on Machine Learning
publication_status: published
publisher: ML Research Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Intriguing properties of input-dependent randomized smoothing
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 162
year: '2022'
...
---
_id: '12670'
abstract:
- lang: eng
  text: DNA methylation plays essential homeostatic functions in eukaryotic genomes.
    In animals, DNA methylation is also developmentally regulated and, in turn, regulates
    development. In the past two decades, huge research effort has endorsed the understanding
    that DNA methylation plays a similar role in plant development, especially during
    sexual reproduction. The power of whole-genome sequencing and cell isolation techniques,
    as well as bioinformatics tools, have enabled recent studies to reveal dynamic
    changes in DNA methylation during germline development. Furthermore, the combination
    of these technological advances with genetics, developmental biology and cell
    biology tools has revealed functional methylation reprogramming events that control
    gene and transposon activities in flowering plant germlines. In this review, we
    discuss the major advances in our knowledge of DNA methylation dynamics during
    male and female germline development in flowering plants.
article_processing_charge: No
article_type: review
author:
- first_name: Shengbo
  full_name: He, Shengbo
  last_name: He
- first_name: Xiaoqi
  full_name: Feng, Xiaoqi
  id: e0164712-22ee-11ed-b12a-d80fcdf35958
  last_name: Feng
  orcid: 0000-0002-4008-1234
citation:
  ama: He S, Feng X. DNA methylation dynamics during germline development. <i>Journal
    of Integrative Plant Biology</i>. 2022;64(12):2240-2251. doi:<a href="https://doi.org/10.1111/jipb.13422">10.1111/jipb.13422</a>
  apa: He, S., &#38; Feng, X. (2022). DNA methylation dynamics during germline development.
    <i>Journal of Integrative Plant Biology</i>. Wiley. <a href="https://doi.org/10.1111/jipb.13422">https://doi.org/10.1111/jipb.13422</a>
  chicago: He, Shengbo, and Xiaoqi Feng. “DNA Methylation Dynamics during Germline
    Development.” <i>Journal of Integrative Plant Biology</i>. Wiley, 2022. <a href="https://doi.org/10.1111/jipb.13422">https://doi.org/10.1111/jipb.13422</a>.
  ieee: S. He and X. Feng, “DNA methylation dynamics during germline development,”
    <i>Journal of Integrative Plant Biology</i>, vol. 64, no. 12. Wiley, pp. 2240–2251,
    2022.
  ista: He S, Feng X. 2022. DNA methylation dynamics during germline development.
    Journal of Integrative Plant Biology. 64(12), 2240–2251.
  mla: He, Shengbo, and Xiaoqi Feng. “DNA Methylation Dynamics during Germline Development.”
    <i>Journal of Integrative Plant Biology</i>, vol. 64, no. 12, Wiley, 2022, pp.
    2240–51, doi:<a href="https://doi.org/10.1111/jipb.13422">10.1111/jipb.13422</a>.
  short: S. He, X. Feng, Journal of Integrative Plant Biology 64 (2022) 2240–2251.
date_created: 2023-02-23T09:15:57Z
date_published: 2022-12-07T00:00:00Z
date_updated: 2023-05-08T10:59:00Z
day: '07'
department:
- _id: XiFe
doi: 10.1111/jipb.13422
extern: '1'
external_id:
  pmid:
  - '36478632'
intvolume: '        64'
issue: '12'
keyword:
- Plant Science
- General Biochemistry
- Genetics and Molecular Biology
- Biochemistry
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1111/jipb.13422
month: '12'
oa: 1
oa_version: Published Version
page: 2240-2251
pmid: 1
publication: Journal of Integrative Plant Biology
publication_identifier:
  eissn:
  - 1744-7909
  issn:
  - 1672-9072
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: DNA methylation dynamics during germline development
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 64
year: '2022'
...
---
_id: '12671'
abstract:
- lang: eng
  text: Sperm chromatin is typically transformed by protamines into a compact and
    transcriptionally inactive state1,2. Sperm cells of flowering plants lack protamines,
    yet they have small, transcriptionally active nuclei with chromatin condensed
    through an unknown mechanism3,4. Here we show that a histone variant, H2B.8, mediates
    sperm chromatin and nuclear condensation in Arabidopsis thaliana. Loss of H2B.8
    causes enlarged sperm nuclei with dispersed chromatin, whereas ectopic expression
    in somatic cells produces smaller nuclei with aggregated chromatin. This result
    demonstrates that H2B.8 is sufficient for chromatin condensation. H2B.8 aggregates
    transcriptionally inactive AT-rich chromatin into phase-separated condensates,
    which facilitates nuclear compaction without reducing transcription. Reciprocal
    crosses show that mutation of h2b.8 reduces male transmission, which suggests
    that H2B.8-mediated sperm compaction is important for fertility. Altogether, our
    results reveal a new mechanism of nuclear compaction through global aggregation
    of unexpressed chromatin. We propose that H2B.8 is an evolutionary innovation
    of flowering plants that achieves nuclear condensation compatible with active
    transcription.
article_processing_charge: No
article_type: original
author:
- first_name: Toby
  full_name: Buttress, Toby
  last_name: Buttress
- first_name: Shengbo
  full_name: He, Shengbo
  last_name: He
- first_name: Liang
  full_name: Wang, Liang
  last_name: Wang
- first_name: Shaoli
  full_name: Zhou, Shaoli
  last_name: Zhou
- first_name: Gerhard
  full_name: Saalbach, Gerhard
  last_name: Saalbach
- first_name: Martin
  full_name: Vickers, Martin
  last_name: Vickers
- first_name: Guohong
  full_name: Li, Guohong
  last_name: Li
- first_name: Pilong
  full_name: Li, Pilong
  last_name: Li
- first_name: Xiaoqi
  full_name: Feng, Xiaoqi
  id: e0164712-22ee-11ed-b12a-d80fcdf35958
  last_name: Feng
  orcid: 0000-0002-4008-1234
citation:
  ama: Buttress T, He S, Wang L, et al. Histone H2B.8 compacts flowering plant sperm
    through chromatin phase separation. <i>Nature</i>. 2022;611(7936):614-622. doi:<a
    href="https://doi.org/10.1038/s41586-022-05386-6">10.1038/s41586-022-05386-6</a>
  apa: Buttress, T., He, S., Wang, L., Zhou, S., Saalbach, G., Vickers, M., … Feng,
    X. (2022). Histone H2B.8 compacts flowering plant sperm through chromatin phase
    separation. <i>Nature</i>. Springer Nature. <a href="https://doi.org/10.1038/s41586-022-05386-6">https://doi.org/10.1038/s41586-022-05386-6</a>
  chicago: Buttress, Toby, Shengbo He, Liang Wang, Shaoli Zhou, Gerhard Saalbach,
    Martin Vickers, Guohong Li, Pilong Li, and Xiaoqi Feng. “Histone H2B.8 Compacts
    Flowering Plant Sperm through Chromatin Phase Separation.” <i>Nature</i>. Springer
    Nature, 2022. <a href="https://doi.org/10.1038/s41586-022-05386-6">https://doi.org/10.1038/s41586-022-05386-6</a>.
  ieee: T. Buttress <i>et al.</i>, “Histone H2B.8 compacts flowering plant sperm through
    chromatin phase separation,” <i>Nature</i>, vol. 611, no. 7936. Springer Nature,
    pp. 614–622, 2022.
  ista: Buttress T, He S, Wang L, Zhou S, Saalbach G, Vickers M, Li G, Li P, Feng
    X. 2022. Histone H2B.8 compacts flowering plant sperm through chromatin phase
    separation. Nature. 611(7936), 614–622.
  mla: Buttress, Toby, et al. “Histone H2B.8 Compacts Flowering Plant Sperm through
    Chromatin Phase Separation.” <i>Nature</i>, vol. 611, no. 7936, Springer Nature,
    2022, pp. 614–22, doi:<a href="https://doi.org/10.1038/s41586-022-05386-6">10.1038/s41586-022-05386-6</a>.
  short: T. Buttress, S. He, L. Wang, S. Zhou, G. Saalbach, M. Vickers, G. Li, P.
    Li, X. Feng, Nature 611 (2022) 614–622.
date_created: 2023-02-23T09:17:05Z
date_published: 2022-11-17T00:00:00Z
date_updated: 2023-05-08T10:59:22Z
day: '17'
department:
- _id: XiFe
doi: 10.1038/s41586-022-05386-6
extern: '1'
external_id:
  pmid:
  - '36323776'
intvolume: '       611'
issue: '7936'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1038/s41586-022-05386-6
month: '11'
oa: 1
oa_version: Published Version
page: 614-622
pmid: 1
publication: Nature
publication_identifier:
  eissn:
  - 1476-4687
  issn:
  - 0028-0836
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Histone H2B.8 compacts flowering plant sperm through chromatin phase separation
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 611
year: '2022'
...
---
_id: '12677'
abstract:
- lang: eng
  text: "In modern sample-driven Prophet Inequality, an adversary chooses a sequence
    of n items with values v1,v2,…,vn to be presented to a decision maker (DM). The
    process follows in two phases. In the first phase (sampling phase), some items,
    possibly selected at random, are revealed to the DM, but she can never accept
    them. In the second phase, the DM is presented with the other items in a random
    order and online fashion. For each item, she must make an irrevocable decision
    to either accept the item and stop the process or reject the item forever and
    proceed to the next item. The goal of the DM is to maximize the expected value
    as compared to a Prophet (or offline algorithm) that has access to all information.
    In this setting, the sampling phase has no cost and is not part of the optimization
    process. However, in many scenarios, the samples are obtained as part of the decision-making
    process.\r\nWe model this aspect as a two-phase Prophet Inequality where an adversary
    chooses a sequence of 2n items with values v1,v2,…,v2n and the items are randomly
    ordered. Finally, there are two phases of the Prophet Inequality problem with
    the first n-items and the rest of the items, respectively. We show that some basic
    algorithms achieve a ratio of at most 0.450. We present an algorithm that achieves
    a ratio of at least 0.495. Finally, we show that for every algorithm the ratio
    it can achieve is at most 0.502. Hence our algorithm is near-optimal."
acknowledgement: This research was partially supported by the ERC CoG 863818 (ForM-SMArt)
  grant.
article_number: '2209.14368'
article_processing_charge: No
arxiv: 1
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Mona
  full_name: Mohammadi, Mona
  id: 4363614d-b686-11ed-a7d5-ac9e4a24bc2e
  last_name: Mohammadi
- first_name: Raimundo J
  full_name: Saona Urmeneta, Raimundo J
  id: BD1DF4C4-D767-11E9-B658-BC13E6697425
  last_name: Saona Urmeneta
  orcid: 0000-0001-5103-038X
citation:
  ama: Chatterjee K, Mohammadi M, Saona Urmeneta RJ. Repeated prophet inequality with
    near-optimal bounds. <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/ARXIV.2209.14368">10.48550/ARXIV.2209.14368</a>
  apa: Chatterjee, K., Mohammadi, M., &#38; Saona Urmeneta, R. J. (n.d.). Repeated
    prophet inequality with near-optimal bounds. <i>arXiv</i>. <a href="https://doi.org/10.48550/ARXIV.2209.14368">https://doi.org/10.48550/ARXIV.2209.14368</a>
  chicago: Chatterjee, Krishnendu, Mona Mohammadi, and Raimundo J Saona Urmeneta.
    “Repeated Prophet Inequality with Near-Optimal Bounds.” <i>ArXiv</i>, n.d. <a
    href="https://doi.org/10.48550/ARXIV.2209.14368">https://doi.org/10.48550/ARXIV.2209.14368</a>.
  ieee: K. Chatterjee, M. Mohammadi, and R. J. Saona Urmeneta, “Repeated prophet inequality
    with near-optimal bounds,” <i>arXiv</i>. .
  ista: Chatterjee K, Mohammadi M, Saona Urmeneta RJ. Repeated prophet inequality
    with near-optimal bounds. arXiv, 2209.14368.
  mla: Chatterjee, Krishnendu, et al. “Repeated Prophet Inequality with Near-Optimal
    Bounds.” <i>ArXiv</i>, 2209.14368, doi:<a href="https://doi.org/10.48550/ARXIV.2209.14368">10.48550/ARXIV.2209.14368</a>.
  short: K. Chatterjee, M. Mohammadi, R.J. Saona Urmeneta, ArXiv (n.d.).
date_created: 2023-02-24T12:21:40Z
date_published: 2022-09-28T00:00:00Z
date_updated: 2025-07-14T09:09:51Z
day: '28'
department:
- _id: GradSch
- _id: KrCh
doi: 10.48550/ARXIV.2209.14368
ec_funded: 1
external_id:
  arxiv:
  - '2209.14368'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: ' https://doi.org/10.48550/arXiv.2209.14368'
month: '09'
oa: 1
oa_version: Preprint
project:
- _id: 0599E47C-7A3F-11EA-A408-12923DDC885E
  call_identifier: H2020
  grant_number: '863818'
  name: 'Formal Methods for Stochastic Models: Algorithms and Applications'
publication: arXiv
publication_status: submitted
status: public
title: Repeated prophet inequality with near-optimal bounds
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '12684'
abstract:
- lang: eng
  text: Given a place  ω  of a global function field  K  over a finite field, with
    associated affine function ring  Rω  and completion  Kω , the aim of this paper
    is to give an effective joint equidistribution result for renormalized primitive
    lattice points  (a,b)∈Rω2  in the plane  Kω2 , and for renormalized solutions
    to the gcd equation  ax+by=1 . The main tools are techniques of Goronik and Nevo
    for counting lattice points in well-rounded families of subsets. This gives a
    sharper analog in positive characteristic of a result of Nevo and the first author
    for the equidistribution of the primitive lattice points in  \ZZ2 .
acknowledgement: "The authors warmly thank Amos Nevo for having presented the authors
  to each other during\r\na beautiful conference in Goa in February 2016, where the
  idea of this paper was born. The\r\nfirst author thanks the IHES for two post-doctoral
  years when most of this paper was discussed,\r\nand the Topology team in Orsay for
  financial support at the final stage. The first author was\r\nsupported by the EPRSC
  EP/P026710/1 grant. Finally, we warmly thank the referee for many\r\nvery helpful
  comments that have improved the readability of this paper."
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Tal
  full_name: Horesh, Tal
  id: C8B7BF48-8D81-11E9-BCA9-F536E6697425
  last_name: Horesh
- first_name: Frédéric
  full_name: Paulin, Frédéric
  last_name: Paulin
citation:
  ama: Horesh T, Paulin F. Effective equidistribution of lattice points in positive
    characteristic. <i>Journal de Theorie des Nombres de Bordeaux</i>. 2022;34(3):679-703.
    doi:<a href="https://doi.org/10.5802/JTNB.1222">10.5802/JTNB.1222</a>
  apa: Horesh, T., &#38; Paulin, F. (2022). Effective equidistribution of lattice
    points in positive characteristic. <i>Journal de Theorie Des Nombres de Bordeaux</i>.
    Centre Mersenne. <a href="https://doi.org/10.5802/JTNB.1222">https://doi.org/10.5802/JTNB.1222</a>
  chicago: Horesh, Tal, and Frédéric Paulin. “Effective Equidistribution of Lattice
    Points in Positive Characteristic.” <i>Journal de Theorie Des Nombres de Bordeaux</i>.
    Centre Mersenne, 2022. <a href="https://doi.org/10.5802/JTNB.1222">https://doi.org/10.5802/JTNB.1222</a>.
  ieee: T. Horesh and F. Paulin, “Effective equidistribution of lattice points in
    positive characteristic,” <i>Journal de Theorie des Nombres de Bordeaux</i>, vol.
    34, no. 3. Centre Mersenne, pp. 679–703, 2022.
  ista: Horesh T, Paulin F. 2022. Effective equidistribution of lattice points in
    positive characteristic. Journal de Theorie des Nombres de Bordeaux. 34(3), 679–703.
  mla: Horesh, Tal, and Frédéric Paulin. “Effective Equidistribution of Lattice Points
    in Positive Characteristic.” <i>Journal de Theorie Des Nombres de Bordeaux</i>,
    vol. 34, no. 3, Centre Mersenne, 2022, pp. 679–703, doi:<a href="https://doi.org/10.5802/JTNB.1222">10.5802/JTNB.1222</a>.
  short: T. Horesh, F. Paulin, Journal de Theorie Des Nombres de Bordeaux 34 (2022)
    679–703.
date_created: 2023-02-26T23:01:02Z
date_published: 2022-01-27T00:00:00Z
date_updated: 2023-08-04T10:41:40Z
day: '27'
ddc:
- '510'
department:
- _id: TiBr
doi: 10.5802/JTNB.1222
external_id:
  arxiv:
  - '2001.01534'
  isi:
  - '000926504300003'
file:
- access_level: open_access
  checksum: 08f28fded270251f568f610cf5166d69
  content_type: application/pdf
  creator: dernst
  date_created: 2023-02-27T09:10:13Z
  date_updated: 2023-02-27T09:10:13Z
  file_id: '12689'
  file_name: 2023_JourTheorieNombreBordeaux_Horesh.pdf
  file_size: 870468
  relation: main_file
  success: 1
file_date_updated: 2023-02-27T09:10:13Z
has_accepted_license: '1'
intvolume: '        34'
isi: 1
issue: '3'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
page: 679-703
publication: Journal de Theorie des Nombres de Bordeaux
publication_identifier:
  eissn:
  - 2118-8572
  issn:
  - 1246-7405
publication_status: published
publisher: Centre Mersenne
quality_controlled: '1'
scopus_import: '1'
status: public
title: Effective equidistribution of lattice points in positive characteristic
tmp:
  image: /image/cc_by_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nd/4.0/legalcode
  name: Creative Commons Attribution-NoDerivatives 4.0 International (CC BY-ND 4.0)
  short: CC BY-ND (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 34
year: '2022'
...
---
_id: '12750'
abstract:
- lang: eng
  text: Quantum kinetically constrained models have recently attracted significant
    attention due to their anomalous dynamics and thermalization. In this work, we
    introduce a hitherto unexplored family of kinetically constrained models featuring
    a conserved particle number and strong inversion-symmetry breaking due to facilitated
    hopping. We demonstrate that these models provide a generic example of so-called
    quantum Hilbert space fragmentation, that is manifested in disconnected sectors
    in the Hilbert space that are not apparent in the computational basis. Quantum
    Hilbert space fragmentation leads to an exponential in system size number of eigenstates
    with exactly zero entanglement entropy across several bipartite cuts. These eigenstates
    can be probed dynamically using quenches from simple initial product states. In
    addition, we study the particle spreading under unitary dynamics launched from
    the domain wall state, and find faster than diffusive dynamics at high particle
    densities, that crosses over into logarithmically slow relaxation at smaller densities.
    Using a classically simulable cellular automaton, we reproduce the logarithmic
    dynamics observed in the quantum case. Our work suggests that particle conserving
    constrained models with inversion symmetry breaking realize so far unexplored
    universality classes of dynamics and invite their further theoretical and experimental
    studies.
article_number: '2210.15607'
article_processing_charge: No
arxiv: 1
author:
- first_name: Pietro
  full_name: Brighi, Pietro
  id: 4115AF5C-F248-11E8-B48F-1D18A9856A87
  last_name: Brighi
  orcid: 0000-0002-7969-2729
- first_name: Marko
  full_name: Ljubotina, Marko
  id: F75EE9BE-5C90-11EA-905D-16643DDC885E
  last_name: Ljubotina
  orcid: 0000-0003-0038-7068
- first_name: Maksym
  full_name: Serbyn, Maksym
  id: 47809E7E-F248-11E8-B48F-1D18A9856A87
  last_name: Serbyn
  orcid: 0000-0002-2399-5827
citation:
  ama: Brighi P, Ljubotina M, Serbyn M. Hilbert space fragmentation and slow dynamics
    in particle-conserving quantum East models. <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/arXiv.2210.15607">10.48550/arXiv.2210.15607</a>
  apa: Brighi, P., Ljubotina, M., &#38; Serbyn, M. (n.d.). Hilbert space fragmentation
    and slow dynamics in particle-conserving quantum East models. <i>arXiv</i>. <a
    href="https://doi.org/10.48550/arXiv.2210.15607">https://doi.org/10.48550/arXiv.2210.15607</a>
  chicago: Brighi, Pietro, Marko Ljubotina, and Maksym Serbyn. “Hilbert Space Fragmentation
    and Slow Dynamics in Particle-Conserving Quantum East Models.” <i>ArXiv</i>, n.d.
    <a href="https://doi.org/10.48550/arXiv.2210.15607">https://doi.org/10.48550/arXiv.2210.15607</a>.
  ieee: P. Brighi, M. Ljubotina, and M. Serbyn, “Hilbert space fragmentation and slow
    dynamics in particle-conserving quantum East models,” <i>arXiv</i>. .
  ista: Brighi P, Ljubotina M, Serbyn M. Hilbert space fragmentation and slow dynamics
    in particle-conserving quantum East models. arXiv, 2210.15607.
  mla: Brighi, Pietro, et al. “Hilbert Space Fragmentation and Slow Dynamics in Particle-Conserving
    Quantum East Models.” <i>ArXiv</i>, 2210.15607, doi:<a href="https://doi.org/10.48550/arXiv.2210.15607">10.48550/arXiv.2210.15607</a>.
  short: P. Brighi, M. Ljubotina, M. Serbyn, ArXiv (n.d.).
date_created: 2023-03-23T14:33:13Z
date_published: 2022-11-07T00:00:00Z
date_updated: 2023-09-20T10:46:29Z
day: '07'
department:
- _id: GradSch
- _id: MaSe
doi: 10.48550/arXiv.2210.15607
external_id:
  arxiv:
  - '2210.15607'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2210.15607
month: '11'
oa: 1
oa_version: Preprint
publication: arXiv
publication_status: submitted
related_material:
  record:
  - id: '12732'
    relation: dissertation_contains
    status: public
  - id: '14334'
    relation: later_version
    status: public
status: public
title: Hilbert space fragmentation and slow dynamics in particle-conserving quantum
  East models
tmp:
  image: /images/cc_by_nc_sa.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC
    BY-NC-SA 4.0)
  short: CC BY-NC-SA (4.0)
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '12775'
abstract:
- lang: eng
  text: "We consider the problem of approximating the reachability probabilities in
    Markov decision processes (MDP) with uncountable (continuous) state and action
    spaces. While there are algorithms that, for special classes of such MDP, provide
    a sequence of approximations converging to the true value in the limit, our aim
    is to obtain an algorithm with guarantees on the precision of the approximation.\r\nAs
    this problem is undecidable in general, assumptions on the MDP are necessary.
    Our main contribution is to identify sufficient assumptions that are as weak as
    possible, thus approaching the \"boundary\" of which systems can be correctly
    and reliably analyzed. To this end, we also argue why each of our assumptions
    is necessary for algorithms based on processing finitely many observations.\r\nWe
    present two solution variants. The first one provides converging lower bounds
    under weaker assumptions than typical ones from previous works concerned with
    guarantees. The second one then utilizes stronger assumptions to additionally
    provide converging upper bounds. Altogether, we obtain an anytime algorithm, i.e.
    yielding a sequence of approximants with known and iteratively improving precision,
    converging to the true value in the limit. Besides, due to the generality of our
    assumptions, our algorithms are very general templates, readily allowing for various
    heuristics from literature in contrast to, e.g., a specific discretization algorithm.
    Our theoretical contribution thus paves the way for future practical improvements
    without sacrificing correctness guarantees."
acknowledgement: "Kush Grover: The author has been supported by the DFG research training
  group GRK\r\n2428 ConVeY.\r\nMaximilian Weininger: The author has been partially
  supported by DFG projects 383882557\r\nStatistical Unbounded Verification (SUV)
  and 427755713 Group-By Objectives in Probabilistic\r\nVerification (GOPro)"
alternative_title:
- LIPIcs
article_number: '11'
article_processing_charge: No
arxiv: 1
author:
- first_name: Kush
  full_name: Grover, Kush
  last_name: Grover
- first_name: Jan
  full_name: Kretinsky, Jan
  id: 44CEF464-F248-11E8-B48F-1D18A9856A87
  last_name: Kretinsky
  orcid: 0000-0002-8122-2881
- first_name: Tobias
  full_name: Meggendorfer, Tobias
  id: b21b0c15-30a2-11eb-80dc-f13ca25802e1
  last_name: Meggendorfer
  orcid: 0000-0002-1712-2165
- first_name: Maimilian
  full_name: Weininger, Maimilian
  last_name: Weininger
citation:
  ama: 'Grover K, Kretinsky J, Meggendorfer T, Weininger M. Anytime guarantees for
    reachability in uncountable Markov decision processes. In: <i>33rd International
    Conference on Concurrency Theory </i>. Vol 243. Schloss Dagstuhl - Leibniz-Zentrum
    für Informatik; 2022. doi:<a href="https://doi.org/10.4230/LIPIcs.CONCUR.2022.11">10.4230/LIPIcs.CONCUR.2022.11</a>'
  apa: 'Grover, K., Kretinsky, J., Meggendorfer, T., &#38; Weininger, M. (2022). Anytime
    guarantees for reachability in uncountable Markov decision processes. In <i>33rd
    International Conference on Concurrency Theory </i> (Vol. 243). Warsaw, Poland:
    Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href="https://doi.org/10.4230/LIPIcs.CONCUR.2022.11">https://doi.org/10.4230/LIPIcs.CONCUR.2022.11</a>'
  chicago: Grover, Kush, Jan Kretinsky, Tobias Meggendorfer, and Maimilian Weininger.
    “Anytime Guarantees for Reachability in Uncountable Markov Decision Processes.”
    In <i>33rd International Conference on Concurrency Theory </i>, Vol. 243. Schloss
    Dagstuhl - Leibniz-Zentrum für Informatik, 2022. <a href="https://doi.org/10.4230/LIPIcs.CONCUR.2022.11">https://doi.org/10.4230/LIPIcs.CONCUR.2022.11</a>.
  ieee: K. Grover, J. Kretinsky, T. Meggendorfer, and M. Weininger, “Anytime guarantees
    for reachability in uncountable Markov decision processes,” in <i>33rd International
    Conference on Concurrency Theory </i>, Warsaw, Poland, 2022, vol. 243.
  ista: 'Grover K, Kretinsky J, Meggendorfer T, Weininger M. 2022. Anytime guarantees
    for reachability in uncountable Markov decision processes. 33rd International
    Conference on Concurrency Theory . CONCUR: Conference on Concurrency Theory, LIPIcs,
    vol. 243, 11.'
  mla: Grover, Kush, et al. “Anytime Guarantees for Reachability in Uncountable Markov
    Decision Processes.” <i>33rd International Conference on Concurrency Theory </i>,
    vol. 243, 11, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022, doi:<a
    href="https://doi.org/10.4230/LIPIcs.CONCUR.2022.11">10.4230/LIPIcs.CONCUR.2022.11</a>.
  short: K. Grover, J. Kretinsky, T. Meggendorfer, M. Weininger, in:, 33rd International
    Conference on Concurrency Theory , Schloss Dagstuhl - Leibniz-Zentrum für Informatik,
    2022.
conference:
  end_date: 2022-09-16
  location: Warsaw, Poland
  name: 'CONCUR: Conference on Concurrency Theory'
  start_date: 2022-09-13
date_created: 2023-03-28T08:09:32Z
date_published: 2022-09-15T00:00:00Z
date_updated: 2023-09-26T10:43:30Z
day: '15'
ddc:
- '000'
department:
- _id: KrCh
doi: 10.4230/LIPIcs.CONCUR.2022.11
external_id:
  arxiv:
  - '2008.04824'
file:
- access_level: open_access
  checksum: e282e43d3ae0ba6e067b72f4583e13c0
  content_type: application/pdf
  creator: dernst
  date_created: 2023-09-26T10:43:15Z
  date_updated: 2023-09-26T10:43:15Z
  file_id: '14372'
  file_name: 2022_LIPIcS_Grover.pdf
  file_size: 960036
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  success: 1
file_date_updated: 2023-09-26T10:43:15Z
has_accepted_license: '1'
intvolume: '       243'
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
publication: '33rd International Conference on Concurrency Theory '
publication_identifier:
  issn:
  - 1868-8969
publication_status: published
publisher: Schloss Dagstuhl - Leibniz-Zentrum für Informatik
quality_controlled: '1'
scopus_import: '1'
status: public
title: Anytime guarantees for reachability in uncountable Markov decision processes
tmp:
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  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 243
year: '2022'
...
---
_id: '12776'
abstract:
- lang: eng
  text: An improved asymptotic formula is established for the number of rational points
    of bounded height on the split smooth del Pezzo surface of degree 5. The proof
    uses the five conic bundle structures on the surface.
acknowledgement: This work was begun while the author was participating in the programme
  on "Diophantine equations" at the Hausdorff Research Institute for Mathematics in
  Bonn in 2009. The hospitality and financial support of the institute is gratefully
  acknowledged. The idea of using conic bundles to study the split del Pezzo surface
  of degree 5 was explained to the author by Professor Salberger. The author is very
  grateful to him for his input into this project and also to Shuntaro Yamagishi for
  many useful comments on an earlier version of this manuscript. While working on
  this paper the author was supported by FWF grant P32428-N35.
article_processing_charge: No
article_type: original
author:
- first_name: Timothy D
  full_name: Browning, Timothy D
  id: 35827D50-F248-11E8-B48F-1D18A9856A87
  last_name: Browning
  orcid: 0000-0002-8314-0177
citation:
  ama: Browning TD. Revisiting the Manin–Peyre conjecture for the split del Pezzo
    surface of degree 5. <i>New York Journal of Mathematics</i>. 2022;28:1193-1229.
  apa: Browning, T. D. (2022). Revisiting the Manin–Peyre conjecture for the split
    del Pezzo surface of degree 5. <i>New York Journal of Mathematics</i>. State University
    of New York.
  chicago: Browning, Timothy D. “Revisiting the Manin–Peyre Conjecture for the Split
    Del Pezzo Surface of Degree 5.” <i>New York Journal of Mathematics</i>. State
    University of New York, 2022.
  ieee: T. D. Browning, “Revisiting the Manin–Peyre conjecture for the split del Pezzo
    surface of degree 5,” <i>New York Journal of Mathematics</i>, vol. 28. State University
    of New York, pp. 1193–1229, 2022.
  ista: Browning TD. 2022. Revisiting the Manin–Peyre conjecture for the split del
    Pezzo surface of degree 5. New York Journal of Mathematics. 28, 1193–1229.
  mla: Browning, Timothy D. “Revisiting the Manin–Peyre Conjecture for the Split Del
    Pezzo Surface of Degree 5.” <i>New York Journal of Mathematics</i>, vol. 28, State
    University of New York, 2022, pp. 1193–229.
  short: T.D. Browning, New York Journal of Mathematics 28 (2022) 1193–1229.
date_created: 2023-03-28T09:21:09Z
date_published: 2022-08-24T00:00:00Z
date_updated: 2023-10-18T07:59:13Z
day: '24'
ddc:
- '510'
department:
- _id: TiBr
file:
- access_level: open_access
  checksum: c01e8291794a1bdb7416aa103cb68ef8
  content_type: application/pdf
  creator: dernst
  date_created: 2023-03-30T07:09:35Z
  date_updated: 2023-03-30T07:09:35Z
  file_id: '12778'
  file_name: 2022_NYJM_Browning.pdf
  file_size: 897267
  relation: main_file
  success: 1
file_date_updated: 2023-03-30T07:09:35Z
has_accepted_license: '1'
intvolume: '        28'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
page: 1193 - 1229
project:
- _id: 26AEDAB2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P32428
  name: New frontiers of the Manin conjecture
publication: New York Journal of Mathematics
publication_identifier:
  issn:
  - 1076-9803
publication_status: published
publisher: State University of New York
quality_controlled: '1'
status: public
title: Revisiting the Manin–Peyre conjecture for the split del Pezzo surface of degree
  5
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 28
year: '2022'
...
---
_id: '12780'
abstract:
- lang: eng
  text: "The ability to scale out training workloads has been one of the key performance
    enablers of deep learning. The main scaling approach is data-parallel GPU-based
    training, which has been boosted by hardware and software support for highly efficient
    point-to-point communication, and in particular via hardware bandwidth over-provisioning.
    Overprovisioning comes at a cost: there is an order of magnitude price difference
    between \"cloud-grade\" servers with such support, relative to their popular \"consumer-grade\"
    counterparts, although single server-grade and consumer-grade GPUs can have similar
    computational envelopes.\r\n\r\nIn this paper, we show that the costly hardware
    overprovisioning approach can be supplanted via algorithmic and system design,
    and propose a framework called CGX, which provides efficient software support
    for compressed communication in ML applications, for both multi-GPU single-node
    training, as well as larger-scale multi-node training. CGX is based on two technical
    advances: At the system level, it relies on a re-developed communication stack
    for ML frameworks, which provides flexible, highly-efficient support for compressed
    communication. At the application level, it provides seamless, parameter-free
    integration with popular frameworks, so that end-users do not have to modify training
    recipes, nor significant training code. This is complemented by a layer-wise adaptive
    compression technique which dynamically balances compression gains with accuracy
    preservation. CGX integrates with popular ML frameworks, providing up to 3X speedups
    for multi-GPU nodes based on commodity hardware, and order-of-magnitude improvements
    in the multi-node setting, with negligible impact on accuracy."
acknowledgement: The authors sincerely thank Nikoli Dryden, Tal Ben-Nun, Torsten Hoefler
  and Bapi Chatterjee for useful discussions throughout the development of this project.
article_processing_charge: Yes (via OA deal)
arxiv: 1
author:
- first_name: Ilia
  full_name: Markov, Ilia
  id: D0CF4148-C985-11E9-8066-0BDEE5697425
  last_name: Markov
- first_name: Hamidreza
  full_name: Ramezanikebrya, Hamidreza
  last_name: Ramezanikebrya
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
citation:
  ama: 'Markov I, Ramezanikebrya H, Alistarh D-A. CGX: Adaptive system support for
    communication-efficient deep learning. In: <i>Proceedings of the 23rd ACM/IFIP
    International Middleware Conference</i>. Association for Computing Machinery;
    2022:241-254. doi:<a href="https://doi.org/10.1145/3528535.3565248">10.1145/3528535.3565248</a>'
  apa: 'Markov, I., Ramezanikebrya, H., &#38; Alistarh, D.-A. (2022). CGX: Adaptive
    system support for communication-efficient deep learning. In <i>Proceedings of
    the 23rd ACM/IFIP International Middleware Conference</i> (pp. 241–254). Quebec,
    QC, Canada: Association for Computing Machinery. <a href="https://doi.org/10.1145/3528535.3565248">https://doi.org/10.1145/3528535.3565248</a>'
  chicago: 'Markov, Ilia, Hamidreza Ramezanikebrya, and Dan-Adrian Alistarh. “CGX:
    Adaptive System Support for Communication-Efficient Deep Learning.” In <i>Proceedings
    of the 23rd ACM/IFIP International Middleware Conference</i>, 241–54. Association
    for Computing Machinery, 2022. <a href="https://doi.org/10.1145/3528535.3565248">https://doi.org/10.1145/3528535.3565248</a>.'
  ieee: 'I. Markov, H. Ramezanikebrya, and D.-A. Alistarh, “CGX: Adaptive system support
    for communication-efficient deep learning,” in <i>Proceedings of the 23rd ACM/IFIP
    International Middleware Conference</i>, Quebec, QC, Canada, 2022, pp. 241–254.'
  ista: 'Markov I, Ramezanikebrya H, Alistarh D-A. 2022. CGX: Adaptive system support
    for communication-efficient deep learning. Proceedings of the 23rd ACM/IFIP International
    Middleware Conference. Middleware: International Middleware Conference, 241–254.'
  mla: 'Markov, Ilia, et al. “CGX: Adaptive System Support for Communication-Efficient
    Deep Learning.” <i>Proceedings of the 23rd ACM/IFIP International Middleware Conference</i>,
    Association for Computing Machinery, 2022, pp. 241–54, doi:<a href="https://doi.org/10.1145/3528535.3565248">10.1145/3528535.3565248</a>.'
  short: I. Markov, H. Ramezanikebrya, D.-A. Alistarh, in:, Proceedings of the 23rd
    ACM/IFIP International Middleware Conference, Association for Computing Machinery,
    2022, pp. 241–254.
conference:
  end_date: 2022-11-11
  location: Quebec, QC, Canada
  name: 'Middleware: International Middleware Conference'
  start_date: 2022-11-07
date_created: 2023-03-31T06:17:00Z
date_published: 2022-11-01T00:00:00Z
date_updated: 2023-04-03T06:21:04Z
day: '01'
ddc:
- '000'
department:
- _id: DaAl
doi: 10.1145/3528535.3565248
external_id:
  arxiv:
  - '2111.08617'
file:
- access_level: open_access
  checksum: 1a397746235f245da5468819247ff663
  content_type: application/pdf
  creator: dernst
  date_created: 2023-04-03T06:17:58Z
  date_updated: 2023-04-03T06:17:58Z
  file_id: '12795'
  file_name: 2022_ACMMiddleware_Markov.pdf
  file_size: 1514169
  relation: main_file
  success: 1
file_date_updated: 2023-04-03T06:17:58Z
has_accepted_license: '1'
language:
- iso: eng
month: '11'
oa: 1
oa_version: Published Version
page: 241-254
publication: Proceedings of the 23rd ACM/IFIP International Middleware Conference
publication_identifier:
  isbn:
  - '9781450393409'
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
status: public
title: 'CGX: Adaptive system support for communication-efficient deep learning'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '12793'
abstract:
- lang: eng
  text: "Let F be a global function field with constant field Fq. Let G be a reductive
    group over Fq. We establish a variant of Arthur's truncated kernel for G and for
    its Lie algebra which generalizes Arthur's original construction. We establish
    a coarse geometric expansion for our variant truncation.\r\nAs applications, we
    consider some existence and uniqueness problems of some cuspidal automorphic representations
    for the functions field of the projective line P1Fq with two points of ramifications."
acknowledgement: 'I’d like to thank Prof. Chaudouard for introducing me to this area.
  I’d like to thank Prof. Harris for asking me the question that makes Section 10
  possible. I’m grateful for the support of Prof. Hausel and IST Austria. The author
  was funded by an ISTplus fellowship: This project has received funding from the
  European Union’s Horizon 2020 research and innovation programme under the Marie
  Skłodowska-Curie Grant Agreement No. 754411.'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Hongjie
  full_name: Yu, Hongjie
  id: 3D7DD9BE-F248-11E8-B48F-1D18A9856A87
  last_name: Yu
  orcid: 0000-0001-5128-7126
citation:
  ama: Yu H.  A coarse geometric expansion of a variant of Arthur’s truncated traces
    and some applications. <i>Pacific Journal of Mathematics</i>. 2022;321(1):193-237.
    doi:<a href="https://doi.org/10.2140/pjm.2022.321.193">10.2140/pjm.2022.321.193</a>
  apa: Yu, H. (2022).  A coarse geometric expansion of a variant of Arthur’s truncated
    traces and some applications. <i>Pacific Journal of Mathematics</i>. Mathematical
    Sciences Publishers. <a href="https://doi.org/10.2140/pjm.2022.321.193">https://doi.org/10.2140/pjm.2022.321.193</a>
  chicago: Yu, Hongjie. “ A Coarse Geometric Expansion of a Variant of Arthur’s Truncated
    Traces and Some Applications.” <i>Pacific Journal of Mathematics</i>. Mathematical
    Sciences Publishers, 2022. <a href="https://doi.org/10.2140/pjm.2022.321.193">https://doi.org/10.2140/pjm.2022.321.193</a>.
  ieee: H. Yu, “ A coarse geometric expansion of a variant of Arthur’s truncated traces
    and some applications,” <i>Pacific Journal of Mathematics</i>, vol. 321, no. 1.
    Mathematical Sciences Publishers, pp. 193–237, 2022.
  ista: Yu H. 2022.  A coarse geometric expansion of a variant of Arthur’s truncated
    traces and some applications. Pacific Journal of Mathematics. 321(1), 193–237.
  mla: Yu, Hongjie. “ A Coarse Geometric Expansion of a Variant of Arthur’s Truncated
    Traces and Some Applications.” <i>Pacific Journal of Mathematics</i>, vol. 321,
    no. 1, Mathematical Sciences Publishers, 2022, pp. 193–237, doi:<a href="https://doi.org/10.2140/pjm.2022.321.193">10.2140/pjm.2022.321.193</a>.
  short: H. Yu, Pacific Journal of Mathematics 321 (2022) 193–237.
date_created: 2023-04-02T22:01:11Z
date_published: 2022-08-29T00:00:00Z
date_updated: 2023-08-04T10:42:38Z
day: '29'
department:
- _id: TaHa
doi: 10.2140/pjm.2022.321.193
ec_funded: 1
external_id:
  arxiv:
  - '2109.10245'
  isi:
  - '000954466300006'
intvolume: '       321'
isi: 1
issue: '1'
keyword:
- Arthur–Selberg trace formula
- cuspidal automorphic representations
- global function fields
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2109.10245
month: '08'
oa: 1
oa_version: Preprint
page: 193-237
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '754411'
  name: ISTplus - Postdoctoral Fellowships
publication: Pacific Journal of Mathematics
publication_identifier:
  eissn:
  - 1945-5844
  issn:
  - 0030-8730
publication_status: published
publisher: Mathematical Sciences Publishers
quality_controlled: '1'
scopus_import: '1'
status: public
title: ' A coarse geometric expansion of a variant of Arthur''s truncated traces and
  some applications'
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 321
year: '2022'
...
---
_id: '12860'
abstract:
- lang: eng
  text: 'Memorization of the relation between entities in a dataset can lead to privacy
    issues when using a trained model for question answering. We introduce Relational
    Memorization (RM) to understand, quantify and control this phenomenon. While bounding
    general memorization can have detrimental effects on the performance of a trained
    model, bounding RM does not prevent effective learning. The difference is most
    pronounced when the data distribution is long-tailed, with many queries having
    only few training examples: Impeding general memorization prevents effective learning,
    while impeding only relational memorization still allows learning general properties
    of the underlying concepts. We formalize the notion of Relational Privacy (RP)
    and, inspired by Differential Privacy (DP), we provide a possible definition of
    Differential Relational Privacy (DrP). These notions can be used to describe and
    compute bounds on the amount of RM in a trained model. We illustrate Relational
    Privacy concepts in experiments with large-scale models for Question Answering.'
article_number: '2203.16701'
article_processing_charge: No
arxiv: 1
author:
- first_name: Simone
  full_name: Bombari, Simone
  id: ca726dda-de17-11ea-bc14-f9da834f63aa
  last_name: Bombari
- first_name: Alessandro
  full_name: Achille, Alessandro
  last_name: Achille
- first_name: Zijian
  full_name: Wang, Zijian
  last_name: Wang
- first_name: Yu-Xiang
  full_name: Wang, Yu-Xiang
  last_name: Wang
- first_name: Yusheng
  full_name: Xie, Yusheng
  last_name: Xie
- first_name: Kunwar Yashraj
  full_name: Singh, Kunwar Yashraj
  last_name: Singh
- first_name: Srikar
  full_name: Appalaraju, Srikar
  last_name: Appalaraju
- first_name: Vijay
  full_name: Mahadevan, Vijay
  last_name: Mahadevan
- first_name: Stefano
  full_name: Soatto, Stefano
  last_name: Soatto
citation:
  ama: Bombari S, Achille A, Wang Z, et al. Towards differential relational privacy
    and its use in question answering. <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/arXiv.2203.16701">10.48550/arXiv.2203.16701</a>
  apa: Bombari, S., Achille, A., Wang, Z., Wang, Y.-X., Xie, Y., Singh, K. Y., … Soatto,
    S. (n.d.). Towards differential relational privacy and its use in question answering.
    <i>arXiv</i>. <a href="https://doi.org/10.48550/arXiv.2203.16701">https://doi.org/10.48550/arXiv.2203.16701</a>
  chicago: Bombari, Simone, Alessandro Achille, Zijian Wang, Yu-Xiang Wang, Yusheng
    Xie, Kunwar Yashraj Singh, Srikar Appalaraju, Vijay Mahadevan, and Stefano Soatto.
    “Towards Differential Relational Privacy and Its Use in Question Answering.” <i>ArXiv</i>,
    n.d. <a href="https://doi.org/10.48550/arXiv.2203.16701">https://doi.org/10.48550/arXiv.2203.16701</a>.
  ieee: S. Bombari <i>et al.</i>, “Towards differential relational privacy and its
    use in question answering,” <i>arXiv</i>. .
  ista: Bombari S, Achille A, Wang Z, Wang Y-X, Xie Y, Singh KY, Appalaraju S, Mahadevan
    V, Soatto S. Towards differential relational privacy and its use in question answering.
    arXiv, 2203.16701.
  mla: Bombari, Simone, et al. “Towards Differential Relational Privacy and Its Use
    in Question Answering.” <i>ArXiv</i>, 2203.16701, doi:<a href="https://doi.org/10.48550/arXiv.2203.16701">10.48550/arXiv.2203.16701</a>.
  short: S. Bombari, A. Achille, Z. Wang, Y.-X. Wang, Y. Xie, K.Y. Singh, S. Appalaraju,
    V. Mahadevan, S. Soatto, ArXiv (n.d.).
date_created: 2023-04-23T16:11:48Z
date_published: 2022-03-30T00:00:00Z
date_updated: 2023-04-25T07:34:49Z
day: '30'
department:
- _id: GradSch
- _id: MaMo
doi: 10.48550/arXiv.2203.16701
external_id:
  arxiv:
  - '2203.16701'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2203.16701
month: '03'
oa: 1
oa_version: Preprint
publication: arXiv
publication_status: submitted
status: public
title: Towards differential relational privacy and its use in question answering
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '12894'
acknowledgement: "The abstracts in this booklet are licenced under a CC BY 4.0 licence
  (https://creativecommons.org/licenses/by/4.0/legalcode), except Markus Wallerberger’s
  contribution at page 21, licenced under a CC BY-SA 4.0 licence (https://creativecommons.org/licenses/by-sa/4.0/legalcode).\r\n"
article_processing_charge: No
author:
- first_name: Alois
  full_name: Schlögl, Alois
  id: 45BF87EE-F248-11E8-B48F-1D18A9856A87
  last_name: Schlögl
  orcid: 0000-0002-5621-8100
- first_name: Andrei
  full_name: Hornoiu, Andrei
  id: 77129392-B450-11EA-8745-D4653DDC885E
  last_name: Hornoiu
- first_name: Stefano
  full_name: Elefante, Stefano
  id: 490F40CE-F248-11E8-B48F-1D18A9856A87
  last_name: Elefante
- first_name: Stephan
  full_name: Stadlbauer, Stephan
  id: 4D0BC184-F248-11E8-B48F-1D18A9856A87
  last_name: Stadlbauer
citation:
  ama: 'Schlögl A, Hornoiu A, Elefante S, Stadlbauer S. Where is the sweet spot? A
    procurement story of general purpose compute nodes. In: <i>ASHPC22 - Austrian-Slovenian
    HPC Meeting 2022</i>. EuroCC Austria c/o Universität Wien; 2022:7. doi:<a href="https://doi.org/10.25365/phaidra.337">10.25365/phaidra.337</a>'
  apa: 'Schlögl, A., Hornoiu, A., Elefante, S., &#38; Stadlbauer, S. (2022). Where
    is the sweet spot? A procurement story of general purpose compute nodes. In <i>ASHPC22
    - Austrian-Slovenian HPC Meeting 2022</i> (p. 7). Grundlsee, Austria: EuroCC Austria
    c/o Universität Wien. <a href="https://doi.org/10.25365/phaidra.337">https://doi.org/10.25365/phaidra.337</a>'
  chicago: Schlögl, Alois, Andrei Hornoiu, Stefano Elefante, and Stephan Stadlbauer.
    “Where Is the Sweet Spot? A Procurement Story of General Purpose Compute Nodes.”
    In <i>ASHPC22 - Austrian-Slovenian HPC Meeting 2022</i>, 7. EuroCC Austria c/o
    Universität Wien, 2022. <a href="https://doi.org/10.25365/phaidra.337">https://doi.org/10.25365/phaidra.337</a>.
  ieee: A. Schlögl, A. Hornoiu, S. Elefante, and S. Stadlbauer, “Where is the sweet
    spot? A procurement story of general purpose compute nodes,” in <i>ASHPC22 - Austrian-Slovenian
    HPC Meeting 2022</i>, Grundlsee, Austria, 2022, p. 7.
  ista: 'Schlögl A, Hornoiu A, Elefante S, Stadlbauer S. 2022. Where is the sweet
    spot? A procurement story of general purpose compute nodes. ASHPC22 - Austrian-Slovenian
    HPC Meeting 2022. ASHPC: Austrian-Slovenian HPC Meeting, 7.'
  mla: Schlögl, Alois, et al. “Where Is the Sweet Spot? A Procurement Story of General
    Purpose Compute Nodes.” <i>ASHPC22 - Austrian-Slovenian HPC Meeting 2022</i>,
    EuroCC Austria c/o Universität Wien, 2022, p. 7, doi:<a href="https://doi.org/10.25365/phaidra.337">10.25365/phaidra.337</a>.
  short: A. Schlögl, A. Hornoiu, S. Elefante, S. Stadlbauer, in:, ASHPC22 - Austrian-Slovenian
    HPC Meeting 2022, EuroCC Austria c/o Universität Wien, 2022, p. 7.
conference:
  end_date: 2022-06-02
  location: Grundlsee, Austria
  name: 'ASHPC: Austrian-Slovenian HPC Meeting'
  start_date: 2022-05-31
date_created: 2023-05-05T09:13:42Z
date_published: 2022-06-02T00:00:00Z
date_updated: 2023-05-16T07:42:56Z
day: '02'
ddc:
- '000'
department:
- _id: ScienComp
doi: 10.25365/phaidra.337
file:
- access_level: open_access
  checksum: e3f8c240b85422ce2190e7b203cc2563
  content_type: application/pdf
  creator: schloegl
  date_created: 2023-05-05T09:06:00Z
  date_updated: 2023-05-05T09:06:00Z
  file_id: '12895'
  file_name: BOOKLET_ASHPC22.pdf
  file_size: 7180531
  relation: main_file
  success: 1
file_date_updated: 2023-05-05T09:06:00Z
has_accepted_license: '1'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
page: '7'
publication: ASHPC22 - Austrian-Slovenian HPC Meeting 2022
publication_identifier:
  isbn:
  - 978-3-200-08499-5
publication_status: published
publisher: EuroCC Austria c/o Universität Wien
status: public
title: Where is the sweet spot? A procurement story of general purpose compute nodes
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference_abstract
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '12923'
abstract:
- lang: eng
  text: Photoredox-mediated Ni-catalyzed cross-couplings are powerful transformations
    to form carbon–heteroatom bonds and are generally photocatalyzed by noble metal
    complexes. Low-cost and easy-to-prepare carbon dots (CDs) are attractive quasi-homogeneous
    photocatalyst alternatives, but their applicability is limited by their short
    photoluminescence (PL) lifetimes. By tuning the surface and PL properties of CDs,
    we designed colloidal CD nano-photocatalysts for a broad range of Ni-mediated
    cross-couplings between aryl halides and nucleophiles. In particular, a CD decorated
    with amino groups permitted coupling to a wide range of aryl halides and thiols
    under mild, base-free conditions. Mechanistic studies suggested dynamic quenching
    of the CD excited state by the Ni co-catalyst and identified that pyridinium iodide
    (pyHI), a previously used additive in metallaphotocatalyzed cross-couplings, can
    also act as a photocatalyst in such transformations.
article_processing_charge: No
article_type: original
author:
- first_name: Zhouxiang
  full_name: Zhao, Zhouxiang
  last_name: Zhao
- first_name: Bartholomäus
  full_name: Pieber, Bartholomäus
  id: 93e5e5b2-0da6-11ed-8a41-af589a024726
  last_name: Pieber
  orcid: 0000-0001-8689-388X
- first_name: Martina
  full_name: Delbianco, Martina
  last_name: Delbianco
citation:
  ama: Zhao Z, Pieber B, Delbianco M. Modulating the surface and photophysical properties
    of carbon dots to access colloidal photocatalysts for cross-couplings. <i>ACS
    Catalysis</i>. 2022;12(22):13831-13837. doi:<a href="https://doi.org/10.1021/acscatal.2c04025">10.1021/acscatal.2c04025</a>
  apa: Zhao, Z., Pieber, B., &#38; Delbianco, M. (2022). Modulating the surface and
    photophysical properties of carbon dots to access colloidal photocatalysts for
    cross-couplings. <i>ACS Catalysis</i>. American Chemical Society. <a href="https://doi.org/10.1021/acscatal.2c04025">https://doi.org/10.1021/acscatal.2c04025</a>
  chicago: Zhao, Zhouxiang, Bartholomäus Pieber, and Martina Delbianco. “Modulating
    the Surface and Photophysical Properties of Carbon Dots to Access Colloidal Photocatalysts
    for Cross-Couplings.” <i>ACS Catalysis</i>. American Chemical Society, 2022. <a
    href="https://doi.org/10.1021/acscatal.2c04025">https://doi.org/10.1021/acscatal.2c04025</a>.
  ieee: Z. Zhao, B. Pieber, and M. Delbianco, “Modulating the surface and photophysical
    properties of carbon dots to access colloidal photocatalysts for cross-couplings,”
    <i>ACS Catalysis</i>, vol. 12, no. 22. American Chemical Society, pp. 13831–13837,
    2022.
  ista: Zhao Z, Pieber B, Delbianco M. 2022. Modulating the surface and photophysical
    properties of carbon dots to access colloidal photocatalysts for cross-couplings.
    ACS Catalysis. 12(22), 13831–13837.
  mla: Zhao, Zhouxiang, et al. “Modulating the Surface and Photophysical Properties
    of Carbon Dots to Access Colloidal Photocatalysts for Cross-Couplings.” <i>ACS
    Catalysis</i>, vol. 12, no. 22, American Chemical Society, 2022, pp. 13831–37,
    doi:<a href="https://doi.org/10.1021/acscatal.2c04025">10.1021/acscatal.2c04025</a>.
  short: Z. Zhao, B. Pieber, M. Delbianco, ACS Catalysis 12 (2022) 13831–13837.
date_created: 2023-05-08T08:28:54Z
date_published: 2022-10-27T00:00:00Z
date_updated: 2023-05-15T08:30:13Z
day: '27'
doi: 10.1021/acscatal.2c04025
extern: '1'
intvolume: '        12'
issue: '22'
keyword:
- Catalysis
- General Chemistry
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1021/acscatal.2c04025
month: '10'
oa: 1
oa_version: Published Version
page: 13831-13837
publication: ACS Catalysis
publication_identifier:
  eissn:
  - 2155-5435
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Modulating the surface and photophysical properties of carbon dots to access
  colloidal photocatalysts for cross-couplings
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 12
year: '2022'
...
---
_id: '12924'
abstract:
- lang: eng
  text: We demonstrate that several visible-light-mediated carbon−heteroatom cross-coupling
    reactions can be carried out using a photoactive NiII precatalyst that forms in
    situ from a nickel salt and a bipyridine ligand decorated with two carbazole groups
    (Ni(Czbpy)Cl2). The activation of this precatalyst towards cross-coupling reactions
    follows a hitherto undisclosed mechanism that is different from previously reported
    light-responsive nickel complexes that undergo metal-to-ligand charge transfer.
    Theoretical and spectroscopic investigations revealed that irradiation of Ni(Czbpy)Cl2
    with visible light causes an initial intraligand charge transfer event that triggers
    productive catalysis. Ligand polymerization affords a porous, recyclable organic
    polymer for heterogeneous nickel catalysis of cross-coupling reactions. The heterogeneous
    catalyst shows stable performance in a packed-bed flow reactor during a week of
    continuous operation.
article_number: e202211433
article_processing_charge: No
article_type: original
author:
- first_name: Cristian
  full_name: Cavedon, Cristian
  last_name: Cavedon
- first_name: Sebastian
  full_name: Gisbertz, Sebastian
  last_name: Gisbertz
- first_name: Susanne
  full_name: Reischauer, Susanne
  last_name: Reischauer
- first_name: Sarah
  full_name: Vogl, Sarah
  last_name: Vogl
- first_name: Eric
  full_name: Sperlich, Eric
  last_name: Sperlich
- first_name: John H.
  full_name: Burke, John H.
  last_name: Burke
- first_name: Rachel F.
  full_name: Wallick, Rachel F.
  last_name: Wallick
- first_name: Stefanie
  full_name: Schrottke, Stefanie
  last_name: Schrottke
- first_name: Wei‐Hsin
  full_name: Hsu, Wei‐Hsin
  last_name: Hsu
- first_name: Lucia
  full_name: Anghileri, Lucia
  last_name: Anghileri
- first_name: Yannik
  full_name: Pfeifer, Yannik
  last_name: Pfeifer
- first_name: Noah
  full_name: Richter, Noah
  last_name: Richter
- first_name: Christian
  full_name: Teutloff, Christian
  last_name: Teutloff
- first_name: Henrike
  full_name: Müller‐Werkmeister, Henrike
  last_name: Müller‐Werkmeister
- first_name: Dario
  full_name: Cambié, Dario
  last_name: Cambié
- first_name: Peter H.
  full_name: Seeberger, Peter H.
  last_name: Seeberger
- first_name: Josh
  full_name: Vura‐Weis, Josh
  last_name: Vura‐Weis
- first_name: Renske M.
  full_name: van der Veen, Renske M.
  last_name: van der Veen
- first_name: Arne
  full_name: Thomas, Arne
  last_name: Thomas
- first_name: Bartholomäus
  full_name: Pieber, Bartholomäus
  id: 93e5e5b2-0da6-11ed-8a41-af589a024726
  last_name: Pieber
  orcid: 0000-0001-8689-388X
citation:
  ama: Cavedon C, Gisbertz S, Reischauer S, et al. Intraligand charge transfer enables
    visible‐light‐mediated Nickel‐catalyzed cross-coupling reactions. <i>Angewandte
    Chemie International Edition</i>. 2022;61(46). doi:<a href="https://doi.org/10.1002/anie.202211433">10.1002/anie.202211433</a>
  apa: Cavedon, C., Gisbertz, S., Reischauer, S., Vogl, S., Sperlich, E., Burke, J.
    H., … Pieber, B. (2022). Intraligand charge transfer enables visible‐light‐mediated
    Nickel‐catalyzed cross-coupling reactions. <i>Angewandte Chemie International
    Edition</i>. Wiley. <a href="https://doi.org/10.1002/anie.202211433">https://doi.org/10.1002/anie.202211433</a>
  chicago: Cavedon, Cristian, Sebastian Gisbertz, Susanne Reischauer, Sarah Vogl,
    Eric Sperlich, John H. Burke, Rachel F. Wallick, et al. “Intraligand Charge Transfer
    Enables Visible‐light‐mediated Nickel‐catalyzed Cross-Coupling Reactions.” <i>Angewandte
    Chemie International Edition</i>. Wiley, 2022. <a href="https://doi.org/10.1002/anie.202211433">https://doi.org/10.1002/anie.202211433</a>.
  ieee: C. Cavedon <i>et al.</i>, “Intraligand charge transfer enables visible‐light‐mediated
    Nickel‐catalyzed cross-coupling reactions,” <i>Angewandte Chemie International
    Edition</i>, vol. 61, no. 46. Wiley, 2022.
  ista: Cavedon C, Gisbertz S, Reischauer S, Vogl S, Sperlich E, Burke JH, Wallick
    RF, Schrottke S, Hsu W, Anghileri L, Pfeifer Y, Richter N, Teutloff C, Müller‐Werkmeister
    H, Cambié D, Seeberger PH, Vura‐Weis J, van der Veen RM, Thomas A, Pieber B. 2022.
    Intraligand charge transfer enables visible‐light‐mediated Nickel‐catalyzed cross-coupling
    reactions. Angewandte Chemie International Edition. 61(46), e202211433.
  mla: Cavedon, Cristian, et al. “Intraligand Charge Transfer Enables Visible‐light‐mediated
    Nickel‐catalyzed Cross-Coupling Reactions.” <i>Angewandte Chemie International
    Edition</i>, vol. 61, no. 46, e202211433, Wiley, 2022, doi:<a href="https://doi.org/10.1002/anie.202211433">10.1002/anie.202211433</a>.
  short: C. Cavedon, S. Gisbertz, S. Reischauer, S. Vogl, E. Sperlich, J.H. Burke,
    R.F. Wallick, S. Schrottke, W. Hsu, L. Anghileri, Y. Pfeifer, N. Richter, C. Teutloff,
    H. Müller‐Werkmeister, D. Cambié, P.H. Seeberger, J. Vura‐Weis, R.M. van der Veen,
    A. Thomas, B. Pieber, Angewandte Chemie International Edition 61 (2022).
date_created: 2023-05-08T08:30:11Z
date_published: 2022-11-14T00:00:00Z
date_updated: 2023-05-15T08:27:25Z
day: '14'
doi: 10.1002/anie.202211433
extern: '1'
intvolume: '        61'
issue: '46'
keyword:
- General Chemistry
- Catalysis
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1002/anie.202211433
month: '11'
oa: 1
oa_version: Published Version
publication: Angewandte Chemie International Edition
publication_identifier:
  eissn:
  - 1521-3773
  issn:
  - 1433-7851
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: Intraligand charge transfer enables visible‐light‐mediated Nickel‐catalyzed
  cross-coupling reactions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 61
year: '2022'
...
---
_id: '12938'
abstract:
- lang: eng
  text: In this work, a feed-forward artificial neural network (FF-ANN) design capable
    of locating eigensolutions to Schrödinger's equation via self-supervised learning
    is outlined. Based on the input potential determining the nature of the quantum
    problem, the presented FF-ANN strategy identifies valid solutions solely by minimizing
    Schrödinger's equation encoded in a suitably designed global loss function. In
    addition to benchmark calculations of prototype systems with known analytical
    solutions, the outlined methodology was also applied to experimentally accessible
    quantum systems, such as the vibrational states of molecular hydrogen H2 and its
    isotopologues HD and D2 as well as the torsional tunnel splitting in the phenol
    molecule. It is shown that in conjunction with the use of SIREN activation functions
    a high accuracy in the energy eigenvalues and wavefunctions is achieved without
    the requirement to adjust the implementation to the vastly different range of
    input potentials, thereby even considering problems under periodic boundary conditions.
article_processing_charge: No
article_type: original
author:
- first_name: Jakob
  full_name: Gamper, Jakob
  last_name: Gamper
- first_name: Florian
  full_name: Kluibenschedl, Florian
  id: 7499e70e-eb2c-11ec-b98b-f925648bc9d9
  last_name: Kluibenschedl
- first_name: Alexander K. H.
  full_name: Weiss, Alexander K. H.
  last_name: Weiss
- first_name: Thomas S.
  full_name: Hofer, Thomas S.
  last_name: Hofer
citation:
  ama: Gamper J, Kluibenschedl F, Weiss AKH, Hofer TS. From vibrational spectroscopy
    and quantum tunnelling to periodic band structures – a self-supervised, all-purpose
    neural network approach to general quantum problems. <i>Physical Chemistry Chemical
    Physics</i>. 2022;24(41):25191-25202. doi:<a href="https://doi.org/10.1039/d2cp03921d">10.1039/d2cp03921d</a>
  apa: Gamper, J., Kluibenschedl, F., Weiss, A. K. H., &#38; Hofer, T. S. (2022).
    From vibrational spectroscopy and quantum tunnelling to periodic band structures
    – a self-supervised, all-purpose neural network approach to general quantum problems.
    <i>Physical Chemistry Chemical Physics</i>. Royal Society of Chemistry. <a href="https://doi.org/10.1039/d2cp03921d">https://doi.org/10.1039/d2cp03921d</a>
  chicago: Gamper, Jakob, Florian Kluibenschedl, Alexander K. H. Weiss, and Thomas
    S. Hofer. “From Vibrational Spectroscopy and Quantum Tunnelling to Periodic Band
    Structures – a Self-Supervised, All-Purpose Neural Network Approach to General
    Quantum Problems.” <i>Physical Chemistry Chemical Physics</i>. Royal Society of
    Chemistry, 2022. <a href="https://doi.org/10.1039/d2cp03921d">https://doi.org/10.1039/d2cp03921d</a>.
  ieee: J. Gamper, F. Kluibenschedl, A. K. H. Weiss, and T. S. Hofer, “From vibrational
    spectroscopy and quantum tunnelling to periodic band structures – a self-supervised,
    all-purpose neural network approach to general quantum problems,” <i>Physical
    Chemistry Chemical Physics</i>, vol. 24, no. 41. Royal Society of Chemistry, pp.
    25191–25202, 2022.
  ista: Gamper J, Kluibenschedl F, Weiss AKH, Hofer TS. 2022. From vibrational spectroscopy
    and quantum tunnelling to periodic band structures – a self-supervised, all-purpose
    neural network approach to general quantum problems. Physical Chemistry Chemical
    Physics. 24(41), 25191–25202.
  mla: Gamper, Jakob, et al. “From Vibrational Spectroscopy and Quantum Tunnelling
    to Periodic Band Structures – a Self-Supervised, All-Purpose Neural Network Approach
    to General Quantum Problems.” <i>Physical Chemistry Chemical Physics</i>, vol.
    24, no. 41, Royal Society of Chemistry, 2022, pp. 25191–202, doi:<a href="https://doi.org/10.1039/d2cp03921d">10.1039/d2cp03921d</a>.
  short: J. Gamper, F. Kluibenschedl, A.K.H. Weiss, T.S. Hofer, Physical Chemistry
    Chemical Physics 24 (2022) 25191–25202.
date_created: 2023-05-10T14:48:46Z
date_published: 2022-10-04T00:00:00Z
date_updated: 2023-05-15T07:54:08Z
day: '04'
doi: 10.1039/d2cp03921d
extern: '1'
external_id:
  pmid:
  - '36254856'
intvolume: '        24'
issue: '41'
keyword:
- Physical and Theoretical Chemistry
- General Physics and Astronomy
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1039/D2CP03921D
month: '10'
oa: 1
oa_version: Published Version
page: 25191-25202
pmid: 1
publication: Physical Chemistry Chemical Physics
publication_identifier:
  issn:
  - 1463-9076
  - 1463-9084
publication_status: published
publisher: Royal Society of Chemistry
quality_controlled: '1'
scopus_import: '1'
status: public
title: From vibrational spectroscopy and quantum tunnelling to periodic band structures
  – a self-supervised, all-purpose neural network approach to general quantum problems
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 24
year: '2022'
...
---
_id: '9794'
abstract:
- lang: eng
  text: 'Lymph nodes (LNs) comprise two main structural elements: fibroblastic reticular
    cells that form dedicated niches for immune cell interaction and capsular fibroblasts
    that build a shell around the organ. Immunological challenge causes LNs to increase
    more than tenfold in size within a few days. Here, we characterized the biomechanics
    of LN swelling on the cellular and organ scale. We identified lymphocyte trapping
    by influx and proliferation as drivers of an outward pressure force, causing fibroblastic
    reticular cells of the T-zone (TRCs) and their associated conduits to stretch.
    After an initial phase of relaxation, TRCs sensed the resulting strain through
    cell matrix adhesions, which coordinated local growth and remodeling of the stromal
    network. While the expanded TRC network readopted its typical configuration, a
    massive fibrotic reaction of the organ capsule set in and countered further organ
    expansion. Thus, different fibroblast populations mechanically control LN swelling
    in a multitier fashion.'
acknowledged_ssus:
- _id: Bio
- _id: EM-Fac
- _id: PreCl
- _id: LifeSc
acknowledgement: This research was supported by the Scientific Service Units of IST
  Austria through resources provided by the Imaging and Optics, Electron Microscopy,
  Preclinical and Life Science Facilities. We thank C. Moussion for providing anti-PNAd
  antibody and D. Critchley for Talin1-floxed mice, and E. Papusheva for providing
  a custom 3D channel alignment script. This work was supported by a European Research
  Council grant ERC-CoG-72437 to M.S. M.H. was supported by Czech Sciencundation GACR
  20-24603Y and Charles University PRIMUS/20/MED/013.
article_processing_charge: No
article_type: original
author:
- first_name: Frank P
  full_name: Assen, Frank P
  id: 3A8E7F24-F248-11E8-B48F-1D18A9856A87
  last_name: Assen
  orcid: 0000-0003-3470-6119
- first_name: Jun
  full_name: Abe, Jun
  last_name: Abe
- first_name: Miroslav
  full_name: Hons, Miroslav
  id: 4167FE56-F248-11E8-B48F-1D18A9856A87
  last_name: Hons
  orcid: 0000-0002-6625-3348
- first_name: Robert
  full_name: Hauschild, Robert
  id: 4E01D6B4-F248-11E8-B48F-1D18A9856A87
  last_name: Hauschild
  orcid: 0000-0001-9843-3522
- first_name: Shayan
  full_name: Shamipour, Shayan
  id: 40B34FE2-F248-11E8-B48F-1D18A9856A87
  last_name: Shamipour
- first_name: Walter
  full_name: Kaufmann, Walter
  id: 3F99E422-F248-11E8-B48F-1D18A9856A87
  last_name: Kaufmann
  orcid: 0000-0001-9735-5315
- first_name: Tommaso
  full_name: Costanzo, Tommaso
  id: D93824F4-D9BA-11E9-BB12-F207E6697425
  last_name: Costanzo
  orcid: 0000-0001-9732-3815
- first_name: Gabriel
  full_name: Krens, Gabriel
  id: 2B819732-F248-11E8-B48F-1D18A9856A87
  last_name: Krens
  orcid: 0000-0003-4761-5996
- first_name: Markus
  full_name: Brown, Markus
  id: 3DAB9AFC-F248-11E8-B48F-1D18A9856A87
  last_name: Brown
- first_name: Burkhard
  full_name: Ludewig, Burkhard
  last_name: Ludewig
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
- first_name: Carl-Philipp J
  full_name: Heisenberg, Carl-Philipp J
  id: 39427864-F248-11E8-B48F-1D18A9856A87
  last_name: Heisenberg
  orcid: 0000-0002-0912-4566
- first_name: Wolfgang
  full_name: Weninger, Wolfgang
  last_name: Weninger
- first_name: Edouard B
  full_name: Hannezo, Edouard B
  id: 3A9DB764-F248-11E8-B48F-1D18A9856A87
  last_name: Hannezo
  orcid: 0000-0001-6005-1561
- first_name: Sanjiv A.
  full_name: Luther, Sanjiv A.
  last_name: Luther
- first_name: Jens V.
  full_name: Stein, Jens V.
  last_name: Stein
- first_name: Michael K
  full_name: Sixt, Michael K
  id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87
  last_name: Sixt
  orcid: 0000-0002-4561-241X
citation:
  ama: Assen FP, Abe J, Hons M, et al. Multitier mechanics control stromal adaptations
    in swelling lymph nodes. <i>Nature Immunology</i>. 2022;23:1246-1255. doi:<a href="https://doi.org/10.1038/s41590-022-01257-4">10.1038/s41590-022-01257-4</a>
  apa: Assen, F. P., Abe, J., Hons, M., Hauschild, R., Shamipour, S., Kaufmann, W.,
    … Sixt, M. K. (2022). Multitier mechanics control stromal adaptations in swelling
    lymph nodes. <i>Nature Immunology</i>. Springer Nature. <a href="https://doi.org/10.1038/s41590-022-01257-4">https://doi.org/10.1038/s41590-022-01257-4</a>
  chicago: Assen, Frank P, Jun Abe, Miroslav Hons, Robert Hauschild, Shayan Shamipour,
    Walter Kaufmann, Tommaso Costanzo, et al. “Multitier Mechanics Control Stromal
    Adaptations in Swelling Lymph Nodes.” <i>Nature Immunology</i>. Springer Nature,
    2022. <a href="https://doi.org/10.1038/s41590-022-01257-4">https://doi.org/10.1038/s41590-022-01257-4</a>.
  ieee: F. P. Assen <i>et al.</i>, “Multitier mechanics control stromal adaptations
    in swelling lymph nodes,” <i>Nature Immunology</i>, vol. 23. Springer Nature,
    pp. 1246–1255, 2022.
  ista: Assen FP, Abe J, Hons M, Hauschild R, Shamipour S, Kaufmann W, Costanzo T,
    Krens G, Brown M, Ludewig B, Hippenmeyer S, Heisenberg C-PJ, Weninger W, Hannezo
    EB, Luther SA, Stein JV, Sixt MK. 2022. Multitier mechanics control stromal adaptations
    in swelling lymph nodes. Nature Immunology. 23, 1246–1255.
  mla: Assen, Frank P., et al. “Multitier Mechanics Control Stromal Adaptations in
    Swelling Lymph Nodes.” <i>Nature Immunology</i>, vol. 23, Springer Nature, 2022,
    pp. 1246–55, doi:<a href="https://doi.org/10.1038/s41590-022-01257-4">10.1038/s41590-022-01257-4</a>.
  short: F.P. Assen, J. Abe, M. Hons, R. Hauschild, S. Shamipour, W. Kaufmann, T.
    Costanzo, G. Krens, M. Brown, B. Ludewig, S. Hippenmeyer, C.-P.J. Heisenberg,
    W. Weninger, E.B. Hannezo, S.A. Luther, J.V. Stein, M.K. Sixt, Nature Immunology
    23 (2022) 1246–1255.
date_created: 2021-08-06T09:09:11Z
date_published: 2022-07-11T00:00:00Z
date_updated: 2023-08-02T06:53:07Z
day: '11'
ddc:
- '570'
department:
- _id: SiHi
- _id: CaHe
- _id: EdHa
- _id: EM-Fac
- _id: Bio
- _id: MiSi
doi: 10.1038/s41590-022-01257-4
ec_funded: 1
external_id:
  isi:
  - '000822975900002'
file:
- access_level: open_access
  checksum: 628e7b49809f22c75b428842efe70c68
  content_type: application/pdf
  creator: dernst
  date_created: 2022-07-25T07:11:32Z
  date_updated: 2022-07-25T07:11:32Z
  file_id: '11642'
  file_name: 2022_NatureImmunology_Assen.pdf
  file_size: 11475325
  relation: main_file
  success: 1
file_date_updated: 2022-07-25T07:11:32Z
has_accepted_license: '1'
intvolume: '        23'
isi: 1
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
page: 1246-1255
project:
- _id: 25FE9508-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '724373'
  name: Cellular navigation along spatial gradients
publication: Nature Immunology
publication_identifier:
  eissn:
  - 1529-2916
  issn:
  - 1529-2908
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Multitier mechanics control stromal adaptations in swelling lymph nodes
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 23
year: '2022'
...
---
_id: '9955'
abstract:
- lang: eng
  text: Neurons can change their classical neurotransmitters during ontogeny, sometimes
    going through stages of dual release. Here, we explored the development of the
    neurotransmitter identity of neurons of the avian nucleus isthmi parvocellularis
    (Ipc), whose axon terminals are retinotopically arranged in the optic tectum (TeO)
    and exert a focal gating effect upon the ascending transmission of retinal inputs.
    Although cholinergic and glutamatergic markers are both found in Ipc neurons and
    terminals of adult pigeons and chicks, the mRNA expression of the vesicular acetylcholine
    transporter, VAChT, is weak or absent. To explore how the Ipc neurotransmitter
    identity is established during ontogeny, we analyzed the expression of mRNAs coding
    for cholinergic (ChAT, VAChT, and CHT) and glutamatergic (VGluT2 and VGluT3) markers
    in chick embryos at different developmental stages. We found that between E12
    and E18, Ipc neurons expressed all cholinergic mRNAs and also VGluT2 mRNA; however,
    from E16 through posthatch stages, VAChT mRNA expression was specifically diminished.
    Our ex vivo deposits of tracer crystals and intracellular filling experiments
    revealed that Ipc axons exhibit a mature paintbrush morphology late in development,
    experiencing marked morphological transformations during the period of presumptive
    dual vesicular transmitter release. Additionally, although ChAT protein immunoassays
    increasingly label the growing Ipc axon, this labeling was consistently restricted
    to sparse portions of the terminal branches. Combined, these results suggest that
    the synthesis of glutamate and acetylcholine, and their vesicular release, is
    complexly linked to the developmental processes of branching, growing and remodeling
    of these unique axons.
acknowledgement: 'This work was supported by FONDECYT grants 1151432 and 1210169 to
  Gonzalo J. Marín. FONDECYT grant 1210069 to Jorge Mpodozis. Spanish Ministry of
  Science, Innovation and Universities (MCIU), State Research Agency (AEI) and European
  Regional Development Fund (FEDER), PGC2018-098229-B-100 to José L Ferrán. Spanish
  Ministry of Economy and Competitiveness Excellency Grant BFU2014-57516P (with European
  Community FEDER support), and a Seneca Foundation (Autonomous Community of Murcia)
  Excellency Research contract, ref: 19904/ GERM/15; project name: Genoarchitectonic
  Brain Development and Applications to Neurodegenerative Diseases and Cancer (5672
  Fundación Séneca) to Luis Puelles. The authors gratefully acknowledge the valuable
  editorial help provided by Sara Fernández-Collemann. The authors also thank Elisa
  Sentis and Solano Henríquez for expert technical help.'
article_processing_charge: No
article_type: original
author:
- first_name: Rosana
  full_name: Reyes‐Pinto, Rosana
  last_name: Reyes‐Pinto
- first_name: José L.
  full_name: Ferrán, José L.
  last_name: Ferrán
- first_name: Tomas A
  full_name: Vega Zuniga, Tomas A
  id: 2E7C4E78-F248-11E8-B48F-1D18A9856A87
  last_name: Vega Zuniga
- first_name: Cristian
  full_name: González‐Cabrera, Cristian
  last_name: González‐Cabrera
- first_name: Harald
  full_name: Luksch, Harald
  last_name: Luksch
- first_name: Jorge
  full_name: Mpodozis, Jorge
  last_name: Mpodozis
- first_name: Luis
  full_name: Puelles, Luis
  last_name: Puelles
- first_name: Gonzalo J.
  full_name: Marín, Gonzalo J.
  last_name: Marín
citation:
  ama: Reyes‐Pinto R, Ferrán JL, Vega Zuniga TA, et al. Change in the neurochemical
    signature and morphological development of the parvocellular isthmic projection
    to the avian tectum. <i>Journal of Comparative Neurology</i>. 2022;530(2):553-573.
    doi:<a href="https://doi.org/10.1002/cne.25229">10.1002/cne.25229</a>
  apa: Reyes‐Pinto, R., Ferrán, J. L., Vega Zuniga, T. A., González‐Cabrera, C., Luksch,
    H., Mpodozis, J., … Marín, G. J. (2022). Change in the neurochemical signature
    and morphological development of the parvocellular isthmic projection to the avian
    tectum. <i>Journal of Comparative Neurology</i>. Wiley. <a href="https://doi.org/10.1002/cne.25229">https://doi.org/10.1002/cne.25229</a>
  chicago: Reyes‐Pinto, Rosana, José L. Ferrán, Tomas A Vega Zuniga, Cristian González‐Cabrera,
    Harald Luksch, Jorge Mpodozis, Luis Puelles, and Gonzalo J. Marín. “Change in
    the Neurochemical Signature and Morphological Development of the Parvocellular
    Isthmic Projection to the Avian Tectum.” <i>Journal of Comparative Neurology</i>.
    Wiley, 2022. <a href="https://doi.org/10.1002/cne.25229">https://doi.org/10.1002/cne.25229</a>.
  ieee: R. Reyes‐Pinto <i>et al.</i>, “Change in the neurochemical signature and morphological
    development of the parvocellular isthmic projection to the avian tectum,” <i>Journal
    of Comparative Neurology</i>, vol. 530, no. 2. Wiley, pp. 553–573, 2022.
  ista: Reyes‐Pinto R, Ferrán JL, Vega Zuniga TA, González‐Cabrera C, Luksch H, Mpodozis
    J, Puelles L, Marín GJ. 2022. Change in the neurochemical signature and morphological
    development of the parvocellular isthmic projection to the avian tectum. Journal
    of Comparative Neurology. 530(2), 553–573.
  mla: Reyes‐Pinto, Rosana, et al. “Change in the Neurochemical Signature and Morphological
    Development of the Parvocellular Isthmic Projection to the Avian Tectum.” <i>Journal
    of Comparative Neurology</i>, vol. 530, no. 2, Wiley, 2022, pp. 553–73, doi:<a
    href="https://doi.org/10.1002/cne.25229">10.1002/cne.25229</a>.
  short: R. Reyes‐Pinto, J.L. Ferrán, T.A. Vega Zuniga, C. González‐Cabrera, H. Luksch,
    J. Mpodozis, L. Puelles, G.J. Marín, Journal of Comparative Neurology 530 (2022)
    553–573.
date_created: 2021-08-23T08:40:59Z
date_published: 2022-02-01T00:00:00Z
date_updated: 2023-08-11T10:58:17Z
day: '01'
department:
- _id: MaJö
doi: 10.1002/cne.25229
external_id:
  isi:
  - '000686420000001'
  pmid:
  - '34363623'
intvolume: '       530'
isi: 1
issue: '2'
language:
- iso: eng
month: '02'
oa_version: None
page: 553-573
pmid: 1
publication: Journal of Comparative Neurology
publication_identifier:
  eissn:
  - 1096-9861
  issn:
  - 0021-9967
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: Change in the neurochemical signature and morphological development of the
  parvocellular isthmic projection to the avian tectum
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 530
year: '2022'
...
