[{"extern":"1","volume":17,"abstract":[{"text":"Supraglacial debris covers 7% of mountain glacier area globally and generally reduces glacier surface melt. Enhanced energy absorption at ice cliffs and supraglacial ponds scattered across the debris surface leads these features to contribute disproportionately to glacier-wide ablation. However, the degree to which cliffs and ponds actually increase melt rates remains unclear, as these features have only been studied in a detailed manner for selected locations, almost exclusively in High Mountain Asia. In this study we model the surface energy balance for debris-covered ice, ice cliffs, and supraglacial ponds with a set of automatic weather station records representing the global prevalence of debris-covered glacier ice. We generate 5000 random sets of values for physical parameters using probability distributions derived from literature, which we use to investigate relative melt rates and to isolate the melt responses of debris, cliffs and ponds to the site-specific meteorological forcing. Modelled sub-debris melt rates are primarily controlled by debris thickness and thermal conductivity. At a reference thickness of 0.1 m, sub-debris melt rates vary considerably, differing by up to a factor of four between sites, mainly attributable to air temperature differences. We find that melt rates for ice cliffs are consistently 2–3× the melt rate for clean glacier ice, but this melt enhancement decays with increasing clean ice melt rates. Energy absorption at supraglacial ponds is dominated by latent heat exchange and is therefore highly sensitive to wind speed and relative humidity, but is generally less than for clean ice. Our results provide reference melt enhancement factors for melt modelling of debris-covered glacier sites, globally, while highlighting the need for direct measurement of debris-covered glacier surface characteristics, physical parameters, and local meteorological conditions at a variety of sites around the world.","lang":"eng"}],"doi":"10.1088/1748-9326/ac6966","day":"01","date_updated":"2023-02-28T13:34:25Z","year":"2022","citation":{"ama":"Miles ES, Steiner JF, Buri P, Immerzeel WW, Pellicciotti F. Controls on the relative melt rates of debris-covered glacier surfaces. <i>Environmental Research Letters</i>. 2022;17(6). doi:<a href=\"https://doi.org/10.1088/1748-9326/ac6966\">10.1088/1748-9326/ac6966</a>","apa":"Miles, E. S., Steiner, J. F., Buri, P., Immerzeel, W. W., &#38; Pellicciotti, F. (2022). Controls on the relative melt rates of debris-covered glacier surfaces. <i>Environmental Research Letters</i>. IOP Publishing. <a href=\"https://doi.org/10.1088/1748-9326/ac6966\">https://doi.org/10.1088/1748-9326/ac6966</a>","ieee":"E. S. Miles, J. F. Steiner, P. Buri, W. W. Immerzeel, and F. Pellicciotti, “Controls on the relative melt rates of debris-covered glacier surfaces,” <i>Environmental Research Letters</i>, vol. 17, no. 6. IOP Publishing, 2022.","chicago":"Miles, E S, J F Steiner, P Buri, W W Immerzeel, and Francesca Pellicciotti. “Controls on the Relative Melt Rates of Debris-Covered Glacier Surfaces.” <i>Environmental Research Letters</i>. IOP Publishing, 2022. <a href=\"https://doi.org/10.1088/1748-9326/ac6966\">https://doi.org/10.1088/1748-9326/ac6966</a>.","short":"E.S. Miles, J.F. Steiner, P. Buri, W.W. Immerzeel, F. Pellicciotti, Environmental Research Letters 17 (2022).","mla":"Miles, E. S., et al. “Controls on the Relative Melt Rates of Debris-Covered Glacier Surfaces.” <i>Environmental Research Letters</i>, vol. 17, no. 6, 064004, IOP Publishing, 2022, doi:<a href=\"https://doi.org/10.1088/1748-9326/ac6966\">10.1088/1748-9326/ac6966</a>.","ista":"Miles ES, Steiner JF, Buri P, Immerzeel WW, Pellicciotti F. 2022. Controls on the relative melt rates of debris-covered glacier surfaces. Environmental Research Letters. 17(6), 064004."},"article_type":"letter_note","publisher":"IOP Publishing","quality_controlled":"1","title":"Controls on the relative melt rates of debris-covered glacier surfaces","intvolume":"        17","publication_status":"published","date_created":"2023-02-20T08:10:37Z","article_processing_charge":"No","author":[{"last_name":"Miles","first_name":"E S","full_name":"Miles, E S"},{"last_name":"Steiner","first_name":"J F","full_name":"Steiner, J F"},{"full_name":"Buri, P","first_name":"P","last_name":"Buri"},{"first_name":"W W","last_name":"Immerzeel","full_name":"Immerzeel, W W"},{"id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","full_name":"Pellicciotti, Francesca","last_name":"Pellicciotti","first_name":"Francesca"}],"issue":"6","_id":"12582","scopus_import":"1","status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1088/1748-9326/ac6966"}],"oa":1,"publication_identifier":{"issn":["1748-9326"]},"date_published":"2022-06-01T00:00:00Z","type":"journal_article","language":[{"iso":"eng"}],"keyword":["Public Health","Environmental and Occupational Health","General Environmental Science","Renewable Energy","Sustainability and the Environment"],"month":"06","article_number":"064004","oa_version":"Published Version","publication":"Environmental Research Letters"},{"file_date_updated":"2023-02-20T08:21:35Z","language":[{"iso":"eng"}],"_id":"12660","publication":"arXiv","has_accepted_license":"1","author":[{"id":"e499926b-f6e0-11ea-865d-9c63db0031e8","last_name":"Scott","first_name":"Jonathan A","full_name":"Scott, Jonathan A"},{"id":"2D82B818-F248-11E8-B48F-1D18A9856A87","full_name":"Yeo, Michelle X","first_name":"Michelle X","last_name":"Yeo"},{"first_name":"Christoph","last_name":"Lampert","orcid":"0000-0001-8622-7887","full_name":"Lampert, Christoph","id":"40C20FD2-F248-11E8-B48F-1D18A9856A87"}],"oa_version":"Preprint","publication_status":"submitted","article_processing_charge":"No","department":[{"_id":"ChLa"}],"date_created":"2023-02-20T08:21:50Z","month":"10","title":"Cross-client Label Propagation for transductive federated learning","article_number":"2210.06434","file":[{"relation":"main_file","success":1,"access_level":"open_access","creator":"chl","file_id":"12661","file_size":291893,"checksum":"7ab20543fd4393f14fb857ce2e4f03c6","date_created":"2023-02-20T08:21:35Z","content_type":"application/pdf","file_name":"2210.06434.pdf","date_updated":"2023-02-20T08:21:35Z"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","ddc":["004"],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"date_updated":"2023-02-21T08:20:18Z","citation":{"ieee":"J. A. Scott, M. X. Yeo, and C. Lampert, “Cross-client Label Propagation for transductive federated learning,” <i>arXiv</i>. .","chicago":"Scott, Jonathan A, Michelle X Yeo, and Christoph Lampert. “Cross-Client Label Propagation for Transductive Federated Learning.” <i>ArXiv</i>, n.d. <a href=\"https://doi.org/10.48550/arXiv.2210.06434\">https://doi.org/10.48550/arXiv.2210.06434</a>.","ama":"Scott JA, Yeo MX, Lampert C. Cross-client Label Propagation for transductive federated learning. <i>arXiv</i>. doi:<a href=\"https://doi.org/10.48550/arXiv.2210.06434\">10.48550/arXiv.2210.06434</a>","apa":"Scott, J. A., Yeo, M. X., &#38; Lampert, C. (n.d.). Cross-client Label Propagation for transductive federated learning. <i>arXiv</i>. <a href=\"https://doi.org/10.48550/arXiv.2210.06434\">https://doi.org/10.48550/arXiv.2210.06434</a>","ista":"Scott JA, Yeo MX, Lampert C. Cross-client Label Propagation for transductive federated learning. arXiv, 2210.06434.","mla":"Scott, Jonathan A., et al. “Cross-Client Label Propagation for Transductive Federated Learning.” <i>ArXiv</i>, 2210.06434, doi:<a href=\"https://doi.org/10.48550/arXiv.2210.06434\">10.48550/arXiv.2210.06434</a>.","short":"J.A. Scott, M.X. Yeo, C. Lampert, ArXiv (n.d.)."},"year":"2022","date_published":"2022-10-12T00:00:00Z","external_id":{"arxiv":["2210.06434"]},"type":"preprint","arxiv":1,"doi":"10.48550/arXiv.2210.06434","day":"12","abstract":[{"lang":"eng","text":"We present Cross-Client Label Propagation(XCLP), a new method for transductive federated learning. XCLP estimates a data graph jointly from the data of multiple clients and computes labels for the unlabeled data by propagating label information across the graph. To avoid clients having to share their data with anyone, XCLP employs two cryptographically secure protocols: secure Hamming distance computation and secure summation. We demonstrate two distinct applications of XCLP within federated learning. In the first, we use it in a one-shot way to predict labels for unseen test points. In the second, we use it to repeatedly pseudo-label unlabeled training data in a federated semi-supervised setting. Experiments on both real federated and standard benchmark datasets show that in both applications XCLP achieves higher classification accuracy than alternative approaches."}],"oa":1},{"author":[{"last_name":"Súkeník","first_name":"Peter","full_name":"Súkeník, Peter","id":"d64d6a8d-eb8e-11eb-b029-96fd216dec3c"},{"id":"40C20FD2-F248-11E8-B48F-1D18A9856A87","first_name":"Christoph","last_name":"Lampert","orcid":"0000-0001-8622-7887","full_name":"Lampert, Christoph"}],"publication":"arXiv","_id":"12662","has_accepted_license":"1","month":"08","title":"Generalization in Multi-objective machine learning","article_number":"2208.13499","oa_version":"Preprint","publication_status":"submitted","department":[{"_id":"ChLa"}],"date_created":"2023-02-20T08:23:06Z","article_processing_charge":"No","language":[{"iso":"eng"}],"date_published":"2022-08-29T00:00:00Z","type":"preprint","external_id":{"arxiv":["2208.13499"]},"date_updated":"2023-02-21T08:24:55Z","year":"2022","citation":{"ama":"Súkeník P, Lampert C. Generalization in Multi-objective machine learning. <i>arXiv</i>. doi:<a href=\"https://doi.org/10.48550/arXiv.2208.13499\">10.48550/arXiv.2208.13499</a>","apa":"Súkeník, P., &#38; Lampert, C. (n.d.). Generalization in Multi-objective machine learning. <i>arXiv</i>. <a href=\"https://doi.org/10.48550/arXiv.2208.13499\">https://doi.org/10.48550/arXiv.2208.13499</a>","ieee":"P. Súkeník and C. Lampert, “Generalization in Multi-objective machine learning,” <i>arXiv</i>. .","chicago":"Súkeník, Peter, and Christoph Lampert. “Generalization in Multi-Objective Machine Learning.” <i>ArXiv</i>, n.d. <a href=\"https://doi.org/10.48550/arXiv.2208.13499\">https://doi.org/10.48550/arXiv.2208.13499</a>.","mla":"Súkeník, Peter, and Christoph Lampert. “Generalization in Multi-Objective Machine Learning.” <i>ArXiv</i>, 2208.13499, doi:<a href=\"https://doi.org/10.48550/arXiv.2208.13499\">10.48550/arXiv.2208.13499</a>.","short":"P. Súkeník, C. Lampert, ArXiv (n.d.).","ista":"Súkeník P, Lampert C. Generalization in Multi-objective machine learning. arXiv, 2208.13499."},"abstract":[{"text":"Modern machine learning tasks often require considering not just one but multiple objectives. For example, besides the prediction quality, this could be the efficiency, robustness or fairness of the learned models, or any of their combinations. Multi-objective learning offers a natural framework for handling such problems without having to commit to early trade-offs. Surprisingly, statistical learning theory so far offers almost no insight into the generalization properties of multi-objective learning. In this work, we make first steps to fill this gap: we establish foundational generalization bounds for the multi-objective setting as well as generalization and excess bounds for learning with scalarizations. We also provide the first theoretical analysis of the relation between the Pareto-optimal sets of the true objectives and the Pareto-optimal sets of their empirical approximations from training data. In particular, we show a surprising asymmetry: all Pareto-optimal solutions can be approximated by empirically Pareto-optimal ones, but not vice versa.","lang":"eng"}],"oa":1,"doi":"10.48550/arXiv.2208.13499","arxiv":1,"day":"29","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","ddc":["004"],"main_file_link":[{"url":" https://doi.org/10.48550/arXiv.2208.13499","open_access":"1"}]},{"oa":1,"type":"conference","date_published":"2022-07-19T00:00:00Z","file":[{"success":1,"access_level":"open_access","relation":"main_file","file_id":"12665","creator":"chl","date_created":"2023-02-20T08:30:10Z","checksum":"ab8695b1e24fb4fef4f1f9cd63ca8238","file_size":8470811,"date_updated":"2023-02-20T08:30:10Z","file_name":"sukeni-k22a.pdf","content_type":"application/pdf"}],"status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","month":"07","has_accepted_license":"1","publication":"Proceedings of the 39th International Conference on Machine Learning","conference":{"name":"International Conference on Machine Learning","start_date":"2022-07-17","end_date":"2022-07-23","location":"Baltimore, MD, United States"},"language":[{"iso":"eng"}],"day":"19","arxiv":1,"abstract":[{"lang":"eng","text":"Randomized smoothing is currently considered the state-of-the-art method to obtain certifiably robust classifiers. Despite its remarkable performance, the method is associated with various serious problems such as “certified accuracy waterfalls”, certification vs. accuracy trade-off, or even fairness issues. Input-dependent smoothing approaches have been proposed with intention of overcoming these flaws. However, we demonstrate that these methods lack formal guarantees and so the resulting certificates are not justified. We show that in general, the input-dependent smoothing suffers from the curse of dimensionality, forcing the variance function to have low semi-elasticity. On the other hand, we provide a theoretical and practical framework that enables the usage of input-dependent smoothing even in the presence of the curse of dimensionality, under strict restrictions. We present one concrete design of the smoothing variance function and test it on CIFAR10 and MNIST. Our design mitigates some of the problems of classical smoothing and is formally underlined, yet further improvement of the design is still necessary."}],"year":"2022","citation":{"chicago":"Súkeník, Peter, Aleksei Kuvshinov, and Stephan Günnemann. “Intriguing Properties of Input-Dependent Randomized Smoothing.” In <i>Proceedings of the 39th International Conference on Machine Learning</i>, 162:20697–743. ML Research Press, 2022.","ieee":"P. Súkeník, A. Kuvshinov, and S. Günnemann, “Intriguing properties of input-dependent randomized smoothing,” in <i>Proceedings of the 39th International Conference on Machine Learning</i>, Baltimore, MD, United States, 2022, vol. 162, pp. 20697–20743.","ama":"Súkeník P, Kuvshinov A, Günnemann S. Intriguing properties of input-dependent randomized smoothing. In: <i>Proceedings of the 39th International Conference on Machine Learning</i>. Vol 162. ML Research Press; 2022:20697-20743.","apa":"Súkeník, P., Kuvshinov, A., &#38; Günnemann, S. (2022). Intriguing properties of input-dependent randomized smoothing. In <i>Proceedings of the 39th International Conference on Machine Learning</i> (Vol. 162, pp. 20697–20743). Baltimore, MD, United States: ML Research Press.","ista":"Súkeník P, Kuvshinov A, Günnemann S. 2022. Intriguing properties of input-dependent randomized smoothing. Proceedings of the 39th International Conference on Machine Learning. International Conference on Machine Learning vol. 162, 20697–20743.","short":"P. Súkeník, A. Kuvshinov, S. Günnemann, in:, Proceedings of the 39th International Conference on Machine Learning, ML Research Press, 2022, pp. 20697–20743.","mla":"Súkeník, Peter, et al. “Intriguing Properties of Input-Dependent Randomized Smoothing.” <i>Proceedings of the 39th International Conference on Machine Learning</i>, vol. 162, ML Research Press, 2022, pp. 20697–743."},"date_updated":"2023-02-23T10:03:47Z","external_id":{"arxiv":["2110.05365"]},"volume":162,"ddc":["004"],"date_created":"2023-02-20T08:30:21Z","article_processing_charge":"No","publication_status":"published","intvolume":"       162","title":"Intriguing properties of input-dependent randomized smoothing","scopus_import":"1","_id":"12664","author":[{"full_name":"Súkeník, Peter","last_name":"Súkeník","first_name":"Peter","id":"d64d6a8d-eb8e-11eb-b029-96fd216dec3c"},{"last_name":"Kuvshinov","first_name":"Aleksei","full_name":"Kuvshinov, Aleksei"},{"first_name":"Stephan","last_name":"Günnemann","full_name":"Günnemann, Stephan"}],"publisher":"ML Research Press","quality_controlled":"1","page":"20697-20743","file_date_updated":"2023-02-20T08:30:10Z"},{"language":[{"iso":"eng"}],"keyword":["Plant Science","General Biochemistry","Genetics and Molecular Biology","Biochemistry"],"publication":"Journal of Integrative Plant Biology","oa_version":"Published Version","month":"12","main_file_link":[{"url":"https://doi.org/10.1111/jipb.13422","open_access":"1"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","date_published":"2022-12-07T00:00:00Z","type":"journal_article","publication_identifier":{"issn":["1672-9072"],"eissn":["1744-7909"]},"oa":1,"page":"2240-2251","quality_controlled":"1","publisher":"Wiley","article_type":"review","_id":"12670","pmid":1,"scopus_import":"1","author":[{"full_name":"He, Shengbo","first_name":"Shengbo","last_name":"He"},{"id":"e0164712-22ee-11ed-b12a-d80fcdf35958","last_name":"Feng","first_name":"Xiaoqi","full_name":"Feng, Xiaoqi","orcid":"0000-0002-4008-1234"}],"issue":"12","publication_status":"published","date_created":"2023-02-23T09:15:57Z","article_processing_charge":"No","department":[{"_id":"XiFe"}],"title":"DNA methylation dynamics during germline development","intvolume":"        64","volume":64,"extern":"1","date_updated":"2023-05-08T10:59:00Z","year":"2022","citation":{"ista":"He S, Feng X. 2022. DNA methylation dynamics during germline development. Journal of Integrative Plant Biology. 64(12), 2240–2251.","mla":"He, Shengbo, and Xiaoqi Feng. “DNA Methylation Dynamics during Germline Development.” <i>Journal of Integrative Plant Biology</i>, vol. 64, no. 12, Wiley, 2022, pp. 2240–51, doi:<a href=\"https://doi.org/10.1111/jipb.13422\">10.1111/jipb.13422</a>.","short":"S. He, X. Feng, Journal of Integrative Plant Biology 64 (2022) 2240–2251.","ieee":"S. He and X. Feng, “DNA methylation dynamics during germline development,” <i>Journal of Integrative Plant Biology</i>, vol. 64, no. 12. Wiley, pp. 2240–2251, 2022.","chicago":"He, Shengbo, and Xiaoqi Feng. “DNA Methylation Dynamics during Germline Development.” <i>Journal of Integrative Plant Biology</i>. Wiley, 2022. <a href=\"https://doi.org/10.1111/jipb.13422\">https://doi.org/10.1111/jipb.13422</a>.","ama":"He S, Feng X. DNA methylation dynamics during germline development. <i>Journal of Integrative Plant Biology</i>. 2022;64(12):2240-2251. doi:<a href=\"https://doi.org/10.1111/jipb.13422\">10.1111/jipb.13422</a>","apa":"He, S., &#38; Feng, X. (2022). DNA methylation dynamics during germline development. <i>Journal of Integrative Plant Biology</i>. Wiley. <a href=\"https://doi.org/10.1111/jipb.13422\">https://doi.org/10.1111/jipb.13422</a>"},"external_id":{"pmid":["36478632"]},"doi":"10.1111/jipb.13422","day":"07","abstract":[{"text":"DNA methylation plays essential homeostatic functions in eukaryotic genomes. In animals, DNA methylation is also developmentally regulated and, in turn, regulates development. In the past two decades, huge research effort has endorsed the understanding that DNA methylation plays a similar role in plant development, especially during sexual reproduction. The power of whole-genome sequencing and cell isolation techniques, as well as bioinformatics tools, have enabled recent studies to reveal dynamic changes in DNA methylation during germline development. Furthermore, the combination of these technological advances with genetics, developmental biology and cell biology tools has revealed functional methylation reprogramming events that control gene and transposon activities in flowering plant germlines. In this review, we discuss the major advances in our knowledge of DNA methylation dynamics during male and female germline development in flowering plants.","lang":"eng"}]},{"quality_controlled":"1","page":"614-622","publisher":"Springer Nature","article_type":"original","scopus_import":"1","pmid":1,"_id":"12671","issue":"7936","author":[{"full_name":"Buttress, Toby","last_name":"Buttress","first_name":"Toby"},{"full_name":"He, Shengbo","last_name":"He","first_name":"Shengbo"},{"first_name":"Liang","last_name":"Wang","full_name":"Wang, Liang"},{"last_name":"Zhou","first_name":"Shaoli","full_name":"Zhou, Shaoli"},{"first_name":"Gerhard","last_name":"Saalbach","full_name":"Saalbach, Gerhard"},{"full_name":"Vickers, Martin","last_name":"Vickers","first_name":"Martin"},{"full_name":"Li, Guohong","last_name":"Li","first_name":"Guohong"},{"last_name":"Li","first_name":"Pilong","full_name":"Li, Pilong"},{"id":"e0164712-22ee-11ed-b12a-d80fcdf35958","orcid":"0000-0002-4008-1234","full_name":"Feng, Xiaoqi","first_name":"Xiaoqi","last_name":"Feng"}],"article_processing_charge":"No","department":[{"_id":"XiFe"}],"date_created":"2023-02-23T09:17:05Z","publication_status":"published","intvolume":"       611","title":"Histone H2B.8 compacts flowering plant sperm through chromatin phase separation","volume":611,"extern":"1","citation":{"ieee":"T. Buttress <i>et al.</i>, “Histone H2B.8 compacts flowering plant sperm through chromatin phase separation,” <i>Nature</i>, vol. 611, no. 7936. Springer Nature, pp. 614–622, 2022.","chicago":"Buttress, Toby, Shengbo He, Liang Wang, Shaoli Zhou, Gerhard Saalbach, Martin Vickers, Guohong Li, Pilong Li, and Xiaoqi Feng. “Histone H2B.8 Compacts Flowering Plant Sperm through Chromatin Phase Separation.” <i>Nature</i>. Springer Nature, 2022. <a href=\"https://doi.org/10.1038/s41586-022-05386-6\">https://doi.org/10.1038/s41586-022-05386-6</a>.","apa":"Buttress, T., He, S., Wang, L., Zhou, S., Saalbach, G., Vickers, M., … Feng, X. (2022). Histone H2B.8 compacts flowering plant sperm through chromatin phase separation. <i>Nature</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41586-022-05386-6\">https://doi.org/10.1038/s41586-022-05386-6</a>","ama":"Buttress T, He S, Wang L, et al. Histone H2B.8 compacts flowering plant sperm through chromatin phase separation. <i>Nature</i>. 2022;611(7936):614-622. doi:<a href=\"https://doi.org/10.1038/s41586-022-05386-6\">10.1038/s41586-022-05386-6</a>","ista":"Buttress T, He S, Wang L, Zhou S, Saalbach G, Vickers M, Li G, Li P, Feng X. 2022. Histone H2B.8 compacts flowering plant sperm through chromatin phase separation. Nature. 611(7936), 614–622.","short":"T. Buttress, S. He, L. Wang, S. Zhou, G. Saalbach, M. Vickers, G. Li, P. Li, X. Feng, Nature 611 (2022) 614–622.","mla":"Buttress, Toby, et al. “Histone H2B.8 Compacts Flowering Plant Sperm through Chromatin Phase Separation.” <i>Nature</i>, vol. 611, no. 7936, Springer Nature, 2022, pp. 614–22, doi:<a href=\"https://doi.org/10.1038/s41586-022-05386-6\">10.1038/s41586-022-05386-6</a>."},"year":"2022","date_updated":"2023-05-08T10:59:22Z","external_id":{"pmid":["36323776"]},"day":"17","doi":"10.1038/s41586-022-05386-6","abstract":[{"lang":"eng","text":"Sperm chromatin is typically transformed by protamines into a compact and transcriptionally inactive state1,2. Sperm cells of flowering plants lack protamines, yet they have small, transcriptionally active nuclei with chromatin condensed through an unknown mechanism3,4. Here we show that a histone variant, H2B.8, mediates sperm chromatin and nuclear condensation in Arabidopsis thaliana. Loss of H2B.8 causes enlarged sperm nuclei with dispersed chromatin, whereas ectopic expression in somatic cells produces smaller nuclei with aggregated chromatin. This result demonstrates that H2B.8 is sufficient for chromatin condensation. H2B.8 aggregates transcriptionally inactive AT-rich chromatin into phase-separated condensates, which facilitates nuclear compaction without reducing transcription. Reciprocal crosses show that mutation of h2b.8 reduces male transmission, which suggests that H2B.8-mediated sperm compaction is important for fertility. Altogether, our results reveal a new mechanism of nuclear compaction through global aggregation of unexpressed chromatin. We propose that H2B.8 is an evolutionary innovation of flowering plants that achieves nuclear condensation compatible with active transcription."}],"language":[{"iso":"eng"}],"publication":"Nature","oa_version":"Published Version","month":"11","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1038/s41586-022-05386-6"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","type":"journal_article","date_published":"2022-11-17T00:00:00Z","publication_identifier":{"eissn":["1476-4687"],"issn":["0028-0836"]},"oa":1},{"ec_funded":1,"language":[{"iso":"eng"}],"_id":"12677","publication":"arXiv","author":[{"id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-4561-241X","full_name":"Chatterjee, Krishnendu","first_name":"Krishnendu","last_name":"Chatterjee"},{"id":"4363614d-b686-11ed-a7d5-ac9e4a24bc2e","last_name":"Mohammadi","first_name":"Mona","full_name":"Mohammadi, Mona"},{"full_name":"Saona Urmeneta, Raimundo J","orcid":"0000-0001-5103-038X","last_name":"Saona Urmeneta","first_name":"Raimundo J","id":"BD1DF4C4-D767-11E9-B658-BC13E6697425"}],"oa_version":"Preprint","publication_status":"submitted","article_processing_charge":"No","project":[{"call_identifier":"H2020","_id":"0599E47C-7A3F-11EA-A408-12923DDC885E","name":"Formal Methods for Stochastic Models: Algorithms and Applications","grant_number":"863818"}],"department":[{"_id":"GradSch"},{"_id":"KrCh"}],"date_created":"2023-02-24T12:21:40Z","month":"09","title":"Repeated prophet inequality with near-optimal bounds","article_number":"2209.14368","acknowledgement":"This research was partially supported by the ERC CoG 863818 (ForM-SMArt) grant.","main_file_link":[{"open_access":"1","url":" https://doi.org/10.48550/arXiv.2209.14368"}],"status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_updated":"2025-07-14T09:09:51Z","citation":{"ista":"Chatterjee K, Mohammadi M, Saona Urmeneta RJ. Repeated prophet inequality with near-optimal bounds. arXiv, 2209.14368.","short":"K. Chatterjee, M. Mohammadi, R.J. Saona Urmeneta, ArXiv (n.d.).","mla":"Chatterjee, Krishnendu, et al. “Repeated Prophet Inequality with Near-Optimal Bounds.” <i>ArXiv</i>, 2209.14368, doi:<a href=\"https://doi.org/10.48550/ARXIV.2209.14368\">10.48550/ARXIV.2209.14368</a>.","chicago":"Chatterjee, Krishnendu, Mona Mohammadi, and Raimundo J Saona Urmeneta. “Repeated Prophet Inequality with Near-Optimal Bounds.” <i>ArXiv</i>, n.d. <a href=\"https://doi.org/10.48550/ARXIV.2209.14368\">https://doi.org/10.48550/ARXIV.2209.14368</a>.","ieee":"K. Chatterjee, M. Mohammadi, and R. J. Saona Urmeneta, “Repeated prophet inequality with near-optimal bounds,” <i>arXiv</i>. .","apa":"Chatterjee, K., Mohammadi, M., &#38; Saona Urmeneta, R. J. (n.d.). Repeated prophet inequality with near-optimal bounds. <i>arXiv</i>. <a href=\"https://doi.org/10.48550/ARXIV.2209.14368\">https://doi.org/10.48550/ARXIV.2209.14368</a>","ama":"Chatterjee K, Mohammadi M, Saona Urmeneta RJ. Repeated prophet inequality with near-optimal bounds. <i>arXiv</i>. doi:<a href=\"https://doi.org/10.48550/ARXIV.2209.14368\">10.48550/ARXIV.2209.14368</a>"},"year":"2022","date_published":"2022-09-28T00:00:00Z","external_id":{"arxiv":["2209.14368"]},"type":"preprint","doi":"10.48550/ARXIV.2209.14368","arxiv":1,"day":"28","abstract":[{"text":"In modern sample-driven Prophet Inequality, an adversary chooses a sequence of n items with values v1,v2,…,vn to be presented to a decision maker (DM). The process follows in two phases. In the first phase (sampling phase), some items, possibly selected at random, are revealed to the DM, but she can never accept them. In the second phase, the DM is presented with the other items in a random order and online fashion. For each item, she must make an irrevocable decision to either accept the item and stop the process or reject the item forever and proceed to the next item. The goal of the DM is to maximize the expected value as compared to a Prophet (or offline algorithm) that has access to all information. In this setting, the sampling phase has no cost and is not part of the optimization process. However, in many scenarios, the samples are obtained as part of the decision-making process.\r\nWe model this aspect as a two-phase Prophet Inequality where an adversary chooses a sequence of 2n items with values v1,v2,…,v2n and the items are randomly ordered. Finally, there are two phases of the Prophet Inequality problem with the first n-items and the rest of the items, respectively. We show that some basic algorithms achieve a ratio of at most 0.450. We present an algorithm that achieves a ratio of at least 0.495. Finally, we show that for every algorithm the ratio it can achieve is at most 0.502. Hence our algorithm is near-optimal.","lang":"eng"}],"oa":1},{"publisher":"Centre Mersenne","article_type":"original","quality_controlled":"1","page":"679-703","file_date_updated":"2023-02-27T09:10:13Z","date_created":"2023-02-26T23:01:02Z","article_processing_charge":"No","department":[{"_id":"TiBr"}],"publication_status":"published","intvolume":"        34","title":"Effective equidistribution of lattice points in positive characteristic","scopus_import":"1","_id":"12684","issue":"3","author":[{"last_name":"Horesh","first_name":"Tal","full_name":"Horesh, Tal","id":"C8B7BF48-8D81-11E9-BCA9-F536E6697425"},{"first_name":"Frédéric","last_name":"Paulin","full_name":"Paulin, Frédéric"}],"acknowledgement":"The authors warmly thank Amos Nevo for having presented the authors to each other during\r\na beautiful conference in Goa in February 2016, where the idea of this paper was born. The\r\nfirst author thanks the IHES for two post-doctoral years when most of this paper was discussed,\r\nand the Topology team in Orsay for financial support at the final stage. The first author was\r\nsupported by the EPRSC EP/P026710/1 grant. Finally, we warmly thank the referee for many\r\nvery helpful comments that have improved the readability of this paper.","volume":34,"ddc":["510"],"day":"27","arxiv":1,"doi":"10.5802/JTNB.1222","abstract":[{"text":"Given a place  ω  of a global function field  K  over a finite field, with associated affine function ring  Rω  and completion  Kω , the aim of this paper is to give an effective joint equidistribution result for renormalized primitive lattice points  (a,b)∈Rω2  in the plane  Kω2 , and for renormalized solutions to the gcd equation  ax+by=1 . The main tools are techniques of Goronik and Nevo for counting lattice points in well-rounded families of subsets. This gives a sharper analog in positive characteristic of a result of Nevo and the first author for the equidistribution of the primitive lattice points in  \\ZZ2 .","lang":"eng"}],"year":"2022","citation":{"ista":"Horesh T, Paulin F. 2022. Effective equidistribution of lattice points in positive characteristic. Journal de Theorie des Nombres de Bordeaux. 34(3), 679–703.","mla":"Horesh, Tal, and Frédéric Paulin. “Effective Equidistribution of Lattice Points in Positive Characteristic.” <i>Journal de Theorie Des Nombres de Bordeaux</i>, vol. 34, no. 3, Centre Mersenne, 2022, pp. 679–703, doi:<a href=\"https://doi.org/10.5802/JTNB.1222\">10.5802/JTNB.1222</a>.","short":"T. Horesh, F. Paulin, Journal de Theorie Des Nombres de Bordeaux 34 (2022) 679–703.","chicago":"Horesh, Tal, and Frédéric Paulin. “Effective Equidistribution of Lattice Points in Positive Characteristic.” <i>Journal de Theorie Des Nombres de Bordeaux</i>. Centre Mersenne, 2022. <a href=\"https://doi.org/10.5802/JTNB.1222\">https://doi.org/10.5802/JTNB.1222</a>.","ieee":"T. Horesh and F. Paulin, “Effective equidistribution of lattice points in positive characteristic,” <i>Journal de Theorie des Nombres de Bordeaux</i>, vol. 34, no. 3. Centre Mersenne, pp. 679–703, 2022.","ama":"Horesh T, Paulin F. Effective equidistribution of lattice points in positive characteristic. <i>Journal de Theorie des Nombres de Bordeaux</i>. 2022;34(3):679-703. doi:<a href=\"https://doi.org/10.5802/JTNB.1222\">10.5802/JTNB.1222</a>","apa":"Horesh, T., &#38; Paulin, F. (2022). Effective equidistribution of lattice points in positive characteristic. <i>Journal de Theorie Des Nombres de Bordeaux</i>. Centre Mersenne. <a href=\"https://doi.org/10.5802/JTNB.1222\">https://doi.org/10.5802/JTNB.1222</a>"},"date_updated":"2023-08-04T10:41:40Z","external_id":{"isi":["000926504300003"],"arxiv":["2001.01534"]},"isi":1,"language":[{"iso":"eng"}],"oa_version":"Published Version","month":"01","has_accepted_license":"1","publication":"Journal de Theorie des Nombres de Bordeaux","file":[{"file_id":"12689","creator":"dernst","relation":"main_file","success":1,"access_level":"open_access","date_updated":"2023-02-27T09:10:13Z","content_type":"application/pdf","file_name":"2023_JourTheorieNombreBordeaux_Horesh.pdf","date_created":"2023-02-27T09:10:13Z","file_size":870468,"checksum":"08f28fded270251f568f610cf5166d69"}],"status":"public","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","publication_identifier":{"eissn":["2118-8572"],"issn":["1246-7405"]},"oa":1,"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-nd/4.0/legalcode","name":"Creative Commons Attribution-NoDerivatives 4.0 International (CC BY-ND 4.0)","image":"/image/cc_by_nd.png","short":"CC BY-ND (4.0)"},"type":"journal_article","date_published":"2022-01-27T00:00:00Z"},{"day":"07","doi":"10.48550/arXiv.2210.15607","arxiv":1,"oa":1,"abstract":[{"text":"Quantum kinetically constrained models have recently attracted significant attention due to their anomalous dynamics and thermalization. In this work, we introduce a hitherto unexplored family of kinetically constrained models featuring a conserved particle number and strong inversion-symmetry breaking due to facilitated hopping. We demonstrate that these models provide a generic example of so-called quantum Hilbert space fragmentation, that is manifested in disconnected sectors in the Hilbert space that are not apparent in the computational basis. Quantum Hilbert space fragmentation leads to an exponential in system size number of eigenstates with exactly zero entanglement entropy across several bipartite cuts. These eigenstates can be probed dynamically using quenches from simple initial product states. In addition, we study the particle spreading under unitary dynamics launched from the domain wall state, and find faster than diffusive dynamics at high particle densities, that crosses over into logarithmically slow relaxation at smaller densities. Using a classically simulable cellular automaton, we reproduce the logarithmic dynamics observed in the quantum case. Our work suggests that particle conserving constrained models with inversion symmetry breaking realize so far unexplored universality classes of dynamics and invite their further theoretical and experimental studies.","lang":"eng"}],"year":"2022","citation":{"short":"P. Brighi, M. Ljubotina, M. Serbyn, ArXiv (n.d.).","mla":"Brighi, Pietro, et al. “Hilbert Space Fragmentation and Slow Dynamics in Particle-Conserving Quantum East Models.” <i>ArXiv</i>, 2210.15607, doi:<a href=\"https://doi.org/10.48550/arXiv.2210.15607\">10.48550/arXiv.2210.15607</a>.","ista":"Brighi P, Ljubotina M, Serbyn M. Hilbert space fragmentation and slow dynamics in particle-conserving quantum East models. arXiv, 2210.15607.","apa":"Brighi, P., Ljubotina, M., &#38; Serbyn, M. (n.d.). Hilbert space fragmentation and slow dynamics in particle-conserving quantum East models. <i>arXiv</i>. <a href=\"https://doi.org/10.48550/arXiv.2210.15607\">https://doi.org/10.48550/arXiv.2210.15607</a>","ama":"Brighi P, Ljubotina M, Serbyn M. Hilbert space fragmentation and slow dynamics in particle-conserving quantum East models. <i>arXiv</i>. doi:<a href=\"https://doi.org/10.48550/arXiv.2210.15607\">10.48550/arXiv.2210.15607</a>","ieee":"P. Brighi, M. Ljubotina, and M. Serbyn, “Hilbert space fragmentation and slow dynamics in particle-conserving quantum East models,” <i>arXiv</i>. .","chicago":"Brighi, Pietro, Marko Ljubotina, and Maksym Serbyn. “Hilbert Space Fragmentation and Slow Dynamics in Particle-Conserving Quantum East Models.” <i>ArXiv</i>, n.d. <a href=\"https://doi.org/10.48550/arXiv.2210.15607\">https://doi.org/10.48550/arXiv.2210.15607</a>."},"date_updated":"2023-09-20T10:46:29Z","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)","image":"/images/cc_by_nc_sa.png","short":"CC BY-NC-SA (4.0)"},"external_id":{"arxiv":["2210.15607"]},"type":"preprint","date_published":"2022-11-07T00:00:00Z","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2210.15607"}],"status":"public","related_material":{"record":[{"status":"public","relation":"dissertation_contains","id":"12732"},{"id":"14334","relation":"later_version","status":"public"}]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2023-03-23T14:33:13Z","department":[{"_id":"GradSch"},{"_id":"MaSe"}],"article_processing_charge":"No","publication_status":"submitted","oa_version":"Preprint","article_number":"2210.15607","month":"11","title":"Hilbert space fragmentation and slow dynamics in particle-conserving quantum East models","license":"https://creativecommons.org/licenses/by-nc-sa/4.0/","_id":"12750","publication":"arXiv","author":[{"last_name":"Brighi","first_name":"Pietro","full_name":"Brighi, Pietro","orcid":"0000-0002-7969-2729","id":"4115AF5C-F248-11E8-B48F-1D18A9856A87"},{"orcid":"0000-0003-0038-7068","full_name":"Ljubotina, Marko","first_name":"Marko","last_name":"Ljubotina","id":"F75EE9BE-5C90-11EA-905D-16643DDC885E"},{"id":"47809E7E-F248-11E8-B48F-1D18A9856A87","full_name":"Serbyn, Maksym","orcid":"0000-0002-2399-5827","last_name":"Serbyn","first_name":"Maksym"}],"language":[{"iso":"eng"}]},{"status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","file":[{"access_level":"open_access","success":1,"relation":"main_file","creator":"dernst","file_id":"14372","checksum":"e282e43d3ae0ba6e067b72f4583e13c0","file_size":960036,"date_created":"2023-09-26T10:43:15Z","content_type":"application/pdf","file_name":"2022_LIPIcS_Grover.pdf","date_updated":"2023-09-26T10:43:15Z"}],"oa":1,"publication_identifier":{"issn":["1868-8969"]},"type":"conference","date_published":"2022-09-15T00:00:00Z","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"conference":{"end_date":"2022-09-16","location":"Warsaw, Poland","name":"CONCUR: Conference on Concurrency Theory","start_date":"2022-09-13"},"language":[{"iso":"eng"}],"article_number":"11","month":"09","oa_version":"Published Version","has_accepted_license":"1","publication":"33rd International Conference on Concurrency Theory ","ddc":["000"],"volume":243,"acknowledgement":"Kush Grover: The author has been supported by the DFG research training group GRK\r\n2428 ConVeY.\r\nMaximilian Weininger: The author has been partially supported by DFG projects 383882557\r\nStatistical Unbounded Verification (SUV) and 427755713 Group-By Objectives in Probabilistic\r\nVerification (GOPro)","abstract":[{"lang":"eng","text":"We consider the problem of approximating the reachability probabilities in Markov decision processes (MDP) with uncountable (continuous) state and action spaces. While there are algorithms that, for special classes of such MDP, provide a sequence of approximations converging to the true value in the limit, our aim is to obtain an algorithm with guarantees on the precision of the approximation.\r\nAs this problem is undecidable in general, assumptions on the MDP are necessary. Our main contribution is to identify sufficient assumptions that are as weak as possible, thus approaching the \"boundary\" of which systems can be correctly and reliably analyzed. To this end, we also argue why each of our assumptions is necessary for algorithms based on processing finitely many observations.\r\nWe present two solution variants. The first one provides converging lower bounds under weaker assumptions than typical ones from previous works concerned with guarantees. The second one then utilizes stronger assumptions to additionally provide converging upper bounds. Altogether, we obtain an anytime algorithm, i.e. yielding a sequence of approximants with known and iteratively improving precision, converging to the true value in the limit. Besides, due to the generality of our assumptions, our algorithms are very general templates, readily allowing for various heuristics from literature in contrast to, e.g., a specific discretization algorithm. Our theoretical contribution thus paves the way for future practical improvements without sacrificing correctness guarantees."}],"day":"15","arxiv":1,"doi":"10.4230/LIPIcs.CONCUR.2022.11","external_id":{"arxiv":["2008.04824"]},"year":"2022","citation":{"ama":"Grover K, Kretinsky J, Meggendorfer T, Weininger M. Anytime guarantees for reachability in uncountable Markov decision processes. In: <i>33rd International Conference on Concurrency Theory </i>. Vol 243. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2022. doi:<a href=\"https://doi.org/10.4230/LIPIcs.CONCUR.2022.11\">10.4230/LIPIcs.CONCUR.2022.11</a>","apa":"Grover, K., Kretinsky, J., Meggendorfer, T., &#38; Weininger, M. (2022). Anytime guarantees for reachability in uncountable Markov decision processes. In <i>33rd International Conference on Concurrency Theory </i> (Vol. 243). Warsaw, Poland: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.CONCUR.2022.11\">https://doi.org/10.4230/LIPIcs.CONCUR.2022.11</a>","ieee":"K. Grover, J. Kretinsky, T. Meggendorfer, and M. Weininger, “Anytime guarantees for reachability in uncountable Markov decision processes,” in <i>33rd International Conference on Concurrency Theory </i>, Warsaw, Poland, 2022, vol. 243.","chicago":"Grover, Kush, Jan Kretinsky, Tobias Meggendorfer, and Maimilian Weininger. “Anytime Guarantees for Reachability in Uncountable Markov Decision Processes.” In <i>33rd International Conference on Concurrency Theory </i>, Vol. 243. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022. <a href=\"https://doi.org/10.4230/LIPIcs.CONCUR.2022.11\">https://doi.org/10.4230/LIPIcs.CONCUR.2022.11</a>.","short":"K. Grover, J. Kretinsky, T. Meggendorfer, M. Weininger, in:, 33rd International Conference on Concurrency Theory , Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.","mla":"Grover, Kush, et al. “Anytime Guarantees for Reachability in Uncountable Markov Decision Processes.” <i>33rd International Conference on Concurrency Theory </i>, vol. 243, 11, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022, doi:<a href=\"https://doi.org/10.4230/LIPIcs.CONCUR.2022.11\">10.4230/LIPIcs.CONCUR.2022.11</a>.","ista":"Grover K, Kretinsky J, Meggendorfer T, Weininger M. 2022. Anytime guarantees for reachability in uncountable Markov decision processes. 33rd International Conference on Concurrency Theory . CONCUR: Conference on Concurrency Theory, LIPIcs, vol. 243, 11."},"date_updated":"2023-09-26T10:43:30Z","publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","file_date_updated":"2023-09-26T10:43:15Z","quality_controlled":"1","intvolume":"       243","alternative_title":["LIPIcs"],"title":"Anytime guarantees for reachability in uncountable Markov decision processes","date_created":"2023-03-28T08:09:32Z","department":[{"_id":"KrCh"}],"article_processing_charge":"No","publication_status":"published","author":[{"first_name":"Kush","last_name":"Grover","full_name":"Grover, Kush"},{"id":"44CEF464-F248-11E8-B48F-1D18A9856A87","full_name":"Kretinsky, Jan","orcid":"0000-0002-8122-2881","last_name":"Kretinsky","first_name":"Jan"},{"id":"b21b0c15-30a2-11eb-80dc-f13ca25802e1","last_name":"Meggendorfer","first_name":"Tobias","full_name":"Meggendorfer, Tobias","orcid":"0000-0002-1712-2165"},{"first_name":"Maimilian","last_name":"Weininger","full_name":"Weininger, Maimilian"}],"scopus_import":"1","_id":"12775"},{"type":"journal_article","date_published":"2022-08-24T00:00:00Z","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"oa":1,"publication_identifier":{"issn":["1076-9803"]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","file":[{"date_created":"2023-03-30T07:09:35Z","checksum":"c01e8291794a1bdb7416aa103cb68ef8","file_size":897267,"date_updated":"2023-03-30T07:09:35Z","file_name":"2022_NYJM_Browning.pdf","content_type":"application/pdf","success":1,"access_level":"open_access","relation":"main_file","file_id":"12778","creator":"dernst"}],"has_accepted_license":"1","publication":"New York Journal of Mathematics","month":"08","project":[{"name":"New frontiers of the Manin conjecture","grant_number":"P32428","_id":"26AEDAB2-B435-11E9-9278-68D0E5697425","call_identifier":"FWF"}],"oa_version":"Published Version","language":[{"iso":"eng"}],"year":"2022","citation":{"short":"T.D. Browning, New York Journal of Mathematics 28 (2022) 1193–1229.","mla":"Browning, Timothy D. “Revisiting the Manin–Peyre Conjecture for the Split Del Pezzo Surface of Degree 5.” <i>New York Journal of Mathematics</i>, vol. 28, State University of New York, 2022, pp. 1193–229.","ista":"Browning TD. 2022. Revisiting the Manin–Peyre conjecture for the split del Pezzo surface of degree 5. New York Journal of Mathematics. 28, 1193–1229.","apa":"Browning, T. D. (2022). Revisiting the Manin–Peyre conjecture for the split del Pezzo surface of degree 5. <i>New York Journal of Mathematics</i>. State University of New York.","ama":"Browning TD. Revisiting the Manin–Peyre conjecture for the split del Pezzo surface of degree 5. <i>New York Journal of Mathematics</i>. 2022;28:1193-1229.","ieee":"T. D. Browning, “Revisiting the Manin–Peyre conjecture for the split del Pezzo surface of degree 5,” <i>New York Journal of Mathematics</i>, vol. 28. State University of New York, pp. 1193–1229, 2022.","chicago":"Browning, Timothy D. “Revisiting the Manin–Peyre Conjecture for the Split Del Pezzo Surface of Degree 5.” <i>New York Journal of Mathematics</i>. State University of New York, 2022."},"date_updated":"2023-10-18T07:59:13Z","abstract":[{"lang":"eng","text":"An improved asymptotic formula is established for the number of rational points of bounded height on the split smooth del Pezzo surface of degree 5. The proof uses the five conic bundle structures on the surface."}],"day":"24","ddc":["510"],"volume":28,"acknowledgement":"This work was begun while the author was participating in the programme on \"Diophantine equations\" at the Hausdorff Research Institute for Mathematics in Bonn in 2009. The hospitality and financial support of the institute is gratefully acknowledged. The idea of using conic bundles to study the split del Pezzo surface of degree 5 was explained to the author by Professor Salberger. The author is very grateful to him for his input into this project and also to Shuntaro Yamagishi for many useful comments on an earlier version of this manuscript. While working on this paper the author was supported by FWF grant P32428-N35.","author":[{"orcid":"0000-0002-8314-0177","full_name":"Browning, Timothy D","first_name":"Timothy D","last_name":"Browning","id":"35827D50-F248-11E8-B48F-1D18A9856A87"}],"_id":"12776","intvolume":"        28","title":"Revisiting the Manin–Peyre conjecture for the split del Pezzo surface of degree 5","article_processing_charge":"No","department":[{"_id":"TiBr"}],"date_created":"2023-03-28T09:21:09Z","publication_status":"published","file_date_updated":"2023-03-30T07:09:35Z","quality_controlled":"1","page":"1193 - 1229","article_type":"original","publisher":"State University of New York"},{"title":"CGX: Adaptive system support for communication-efficient deep learning","publication_status":"published","article_processing_charge":"Yes (via OA deal)","date_created":"2023-03-31T06:17:00Z","department":[{"_id":"DaAl"}],"author":[{"full_name":"Markov, Ilia","last_name":"Markov","first_name":"Ilia","id":"D0CF4148-C985-11E9-8066-0BDEE5697425"},{"first_name":"Hamidreza","last_name":"Ramezanikebrya","full_name":"Ramezanikebrya, Hamidreza"},{"id":"4A899BFC-F248-11E8-B48F-1D18A9856A87","full_name":"Alistarh, Dan-Adrian","orcid":"0000-0003-3650-940X","last_name":"Alistarh","first_name":"Dan-Adrian"}],"_id":"12780","publisher":"Association for Computing Machinery","file_date_updated":"2023-04-03T06:17:58Z","page":"241-254","quality_controlled":"1","abstract":[{"lang":"eng","text":"The ability to scale out training workloads has been one of the key performance enablers of deep learning. The main scaling approach is data-parallel GPU-based training, which has been boosted by hardware and software support for highly efficient point-to-point communication, and in particular via hardware bandwidth over-provisioning. Overprovisioning comes at a cost: there is an order of magnitude price difference between \"cloud-grade\" servers with such support, relative to their popular \"consumer-grade\" counterparts, although single server-grade and consumer-grade GPUs can have similar computational envelopes.\r\n\r\nIn this paper, we show that the costly hardware overprovisioning approach can be supplanted via algorithmic and system design, and propose a framework called CGX, which provides efficient software support for compressed communication in ML applications, for both multi-GPU single-node training, as well as larger-scale multi-node training. CGX is based on two technical advances: At the system level, it relies on a re-developed communication stack for ML frameworks, which provides flexible, highly-efficient support for compressed communication. At the application level, it provides seamless, parameter-free integration with popular frameworks, so that end-users do not have to modify training recipes, nor significant training code. This is complemented by a layer-wise adaptive compression technique which dynamically balances compression gains with accuracy preservation. CGX integrates with popular ML frameworks, providing up to 3X speedups for multi-GPU nodes based on commodity hardware, and order-of-magnitude improvements in the multi-node setting, with negligible impact on accuracy."}],"arxiv":1,"doi":"10.1145/3528535.3565248","day":"01","external_id":{"arxiv":["2111.08617"]},"date_updated":"2023-04-03T06:21:04Z","year":"2022","citation":{"ista":"Markov I, Ramezanikebrya H, Alistarh D-A. 2022. CGX: Adaptive system support for communication-efficient deep learning. Proceedings of the 23rd ACM/IFIP International Middleware Conference. Middleware: International Middleware Conference, 241–254.","mla":"Markov, Ilia, et al. “CGX: Adaptive System Support for Communication-Efficient Deep Learning.” <i>Proceedings of the 23rd ACM/IFIP International Middleware Conference</i>, Association for Computing Machinery, 2022, pp. 241–54, doi:<a href=\"https://doi.org/10.1145/3528535.3565248\">10.1145/3528535.3565248</a>.","short":"I. Markov, H. Ramezanikebrya, D.-A. Alistarh, in:, Proceedings of the 23rd ACM/IFIP International Middleware Conference, Association for Computing Machinery, 2022, pp. 241–254.","ieee":"I. Markov, H. Ramezanikebrya, and D.-A. Alistarh, “CGX: Adaptive system support for communication-efficient deep learning,” in <i>Proceedings of the 23rd ACM/IFIP International Middleware Conference</i>, Quebec, QC, Canada, 2022, pp. 241–254.","chicago":"Markov, Ilia, Hamidreza Ramezanikebrya, and Dan-Adrian Alistarh. “CGX: Adaptive System Support for Communication-Efficient Deep Learning.” In <i>Proceedings of the 23rd ACM/IFIP International Middleware Conference</i>, 241–54. Association for Computing Machinery, 2022. <a href=\"https://doi.org/10.1145/3528535.3565248\">https://doi.org/10.1145/3528535.3565248</a>.","ama":"Markov I, Ramezanikebrya H, Alistarh D-A. CGX: Adaptive system support for communication-efficient deep learning. In: <i>Proceedings of the 23rd ACM/IFIP International Middleware Conference</i>. Association for Computing Machinery; 2022:241-254. doi:<a href=\"https://doi.org/10.1145/3528535.3565248\">10.1145/3528535.3565248</a>","apa":"Markov, I., Ramezanikebrya, H., &#38; Alistarh, D.-A. (2022). CGX: Adaptive system support for communication-efficient deep learning. In <i>Proceedings of the 23rd ACM/IFIP International Middleware Conference</i> (pp. 241–254). Quebec, QC, Canada: Association for Computing Machinery. <a href=\"https://doi.org/10.1145/3528535.3565248\">https://doi.org/10.1145/3528535.3565248</a>"},"ddc":["000"],"acknowledgement":"The authors sincerely thank Nikoli Dryden, Tal Ben-Nun, Torsten Hoefler and Bapi Chatterjee for useful discussions throughout the development of this project.","month":"11","oa_version":"Published Version","publication":"Proceedings of the 23rd ACM/IFIP International Middleware Conference","has_accepted_license":"1","conference":{"end_date":"2022-11-11","location":"Quebec, QC, Canada","start_date":"2022-11-07","name":"Middleware: International Middleware Conference"},"language":[{"iso":"eng"}],"oa":1,"publication_identifier":{"isbn":["9781450393409"]},"date_published":"2022-11-01T00:00:00Z","type":"conference","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","file":[{"creator":"dernst","file_id":"12795","access_level":"open_access","success":1,"relation":"main_file","file_name":"2022_ACMMiddleware_Markov.pdf","content_type":"application/pdf","date_updated":"2023-04-03T06:17:58Z","checksum":"1a397746235f245da5468819247ff663","file_size":1514169,"date_created":"2023-04-03T06:17:58Z"}]},{"volume":321,"acknowledgement":"I’d like to thank Prof. Chaudouard for introducing me to this area. I’d like to thank Prof. Harris for asking me the question that makes Section 10 possible. I’m grateful for the support of Prof. Hausel and IST Austria. The author was funded by an ISTplus fellowship: This project has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 754411.","abstract":[{"lang":"eng","text":"Let F be a global function field with constant field Fq. Let G be a reductive group over Fq. We establish a variant of Arthur's truncated kernel for G and for its Lie algebra which generalizes Arthur's original construction. We establish a coarse geometric expansion for our variant truncation.\r\nAs applications, we consider some existence and uniqueness problems of some cuspidal automorphic representations for the functions field of the projective line P1Fq with two points of ramifications."}],"day":"29","arxiv":1,"doi":"10.2140/pjm.2022.321.193","external_id":{"arxiv":["2109.10245"],"isi":["000954466300006"]},"isi":1,"citation":{"ista":"Yu H. 2022.  A coarse geometric expansion of a variant of Arthur’s truncated traces and some applications. Pacific Journal of Mathematics. 321(1), 193–237.","short":"H. Yu, Pacific Journal of Mathematics 321 (2022) 193–237.","mla":"Yu, Hongjie. “ A Coarse Geometric Expansion of a Variant of Arthur’s Truncated Traces and Some Applications.” <i>Pacific Journal of Mathematics</i>, vol. 321, no. 1, Mathematical Sciences Publishers, 2022, pp. 193–237, doi:<a href=\"https://doi.org/10.2140/pjm.2022.321.193\">10.2140/pjm.2022.321.193</a>.","chicago":"Yu, Hongjie. “ A Coarse Geometric Expansion of a Variant of Arthur’s Truncated Traces and Some Applications.” <i>Pacific Journal of Mathematics</i>. Mathematical Sciences Publishers, 2022. <a href=\"https://doi.org/10.2140/pjm.2022.321.193\">https://doi.org/10.2140/pjm.2022.321.193</a>.","ieee":"H. Yu, “ A coarse geometric expansion of a variant of Arthur’s truncated traces and some applications,” <i>Pacific Journal of Mathematics</i>, vol. 321, no. 1. Mathematical Sciences Publishers, pp. 193–237, 2022.","apa":"Yu, H. (2022).  A coarse geometric expansion of a variant of Arthur’s truncated traces and some applications. <i>Pacific Journal of Mathematics</i>. Mathematical Sciences Publishers. <a href=\"https://doi.org/10.2140/pjm.2022.321.193\">https://doi.org/10.2140/pjm.2022.321.193</a>","ama":"Yu H.  A coarse geometric expansion of a variant of Arthur’s truncated traces and some applications. <i>Pacific Journal of Mathematics</i>. 2022;321(1):193-237. doi:<a href=\"https://doi.org/10.2140/pjm.2022.321.193\">10.2140/pjm.2022.321.193</a>"},"year":"2022","date_updated":"2023-08-04T10:42:38Z","article_type":"original","publisher":"Mathematical Sciences Publishers","ec_funded":1,"quality_controlled":"1","page":"193-237","intvolume":"       321","title":" A coarse geometric expansion of a variant of Arthur's truncated traces and some applications","article_processing_charge":"No","department":[{"_id":"TaHa"}],"date_created":"2023-04-02T22:01:11Z","publication_status":"published","issue":"1","author":[{"id":"3D7DD9BE-F248-11E8-B48F-1D18A9856A87","full_name":"Yu, Hongjie","orcid":"0000-0001-5128-7126","last_name":"Yu","first_name":"Hongjie"}],"scopus_import":"1","_id":"12793","status":"public","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2109.10245"}],"oa":1,"publication_identifier":{"issn":["0030-8730"],"eissn":["1945-5844"]},"type":"journal_article","date_published":"2022-08-29T00:00:00Z","keyword":["Arthur–Selberg trace formula","cuspidal automorphic representations","global function fields"],"language":[{"iso":"eng"}],"month":"08","project":[{"call_identifier":"H2020","_id":"260C2330-B435-11E9-9278-68D0E5697425","grant_number":"754411","name":"ISTplus - Postdoctoral Fellowships"}],"oa_version":"Preprint","publication":"Pacific Journal of Mathematics"},{"external_id":{"arxiv":["2203.16701"]},"type":"preprint","date_published":"2022-03-30T00:00:00Z","citation":{"ista":"Bombari S, Achille A, Wang Z, Wang Y-X, Xie Y, Singh KY, Appalaraju S, Mahadevan V, Soatto S. Towards differential relational privacy and its use in question answering. arXiv, 2203.16701.","mla":"Bombari, Simone, et al. “Towards Differential Relational Privacy and Its Use in Question Answering.” <i>ArXiv</i>, 2203.16701, doi:<a href=\"https://doi.org/10.48550/arXiv.2203.16701\">10.48550/arXiv.2203.16701</a>.","short":"S. Bombari, A. Achille, Z. Wang, Y.-X. Wang, Y. Xie, K.Y. Singh, S. Appalaraju, V. Mahadevan, S. Soatto, ArXiv (n.d.).","ieee":"S. Bombari <i>et al.</i>, “Towards differential relational privacy and its use in question answering,” <i>arXiv</i>. .","chicago":"Bombari, Simone, Alessandro Achille, Zijian Wang, Yu-Xiang Wang, Yusheng Xie, Kunwar Yashraj Singh, Srikar Appalaraju, Vijay Mahadevan, and Stefano Soatto. “Towards Differential Relational Privacy and Its Use in Question Answering.” <i>ArXiv</i>, n.d. <a href=\"https://doi.org/10.48550/arXiv.2203.16701\">https://doi.org/10.48550/arXiv.2203.16701</a>.","apa":"Bombari, S., Achille, A., Wang, Z., Wang, Y.-X., Xie, Y., Singh, K. Y., … Soatto, S. (n.d.). Towards differential relational privacy and its use in question answering. <i>arXiv</i>. <a href=\"https://doi.org/10.48550/arXiv.2203.16701\">https://doi.org/10.48550/arXiv.2203.16701</a>","ama":"Bombari S, Achille A, Wang Z, et al. Towards differential relational privacy and its use in question answering. <i>arXiv</i>. doi:<a href=\"https://doi.org/10.48550/arXiv.2203.16701\">10.48550/arXiv.2203.16701</a>"},"year":"2022","date_updated":"2023-04-25T07:34:49Z","oa":1,"abstract":[{"lang":"eng","text":"Memorization of the relation between entities in a dataset can lead to privacy issues when using a trained model for question answering. We introduce Relational Memorization (RM) to understand, quantify and control this phenomenon. While bounding general memorization can have detrimental effects on the performance of a trained model, bounding RM does not prevent effective learning. The difference is most pronounced when the data distribution is long-tailed, with many queries having only few training examples: Impeding general memorization prevents effective learning, while impeding only relational memorization still allows learning general properties of the underlying concepts. We formalize the notion of Relational Privacy (RP) and, inspired by Differential Privacy (DP), we provide a possible definition of Differential Relational Privacy (DrP). These notions can be used to describe and compute bounds on the amount of RM in a trained model. We illustrate Relational Privacy concepts in experiments with large-scale models for Question Answering."}],"day":"30","doi":"10.48550/arXiv.2203.16701","arxiv":1,"status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2203.16701"}],"author":[{"full_name":"Bombari, Simone","last_name":"Bombari","first_name":"Simone","id":"ca726dda-de17-11ea-bc14-f9da834f63aa"},{"full_name":"Achille, Alessandro","last_name":"Achille","first_name":"Alessandro"},{"full_name":"Wang, Zijian","last_name":"Wang","first_name":"Zijian"},{"full_name":"Wang, Yu-Xiang","last_name":"Wang","first_name":"Yu-Xiang"},{"full_name":"Xie, Yusheng","last_name":"Xie","first_name":"Yusheng"},{"full_name":"Singh, Kunwar Yashraj","last_name":"Singh","first_name":"Kunwar Yashraj"},{"full_name":"Appalaraju, Srikar","first_name":"Srikar","last_name":"Appalaraju"},{"full_name":"Mahadevan, Vijay","first_name":"Vijay","last_name":"Mahadevan"},{"full_name":"Soatto, Stefano","first_name":"Stefano","last_name":"Soatto"}],"_id":"12860","publication":"arXiv","article_number":"2203.16701","month":"03","title":"Towards differential relational privacy and its use in question answering","date_created":"2023-04-23T16:11:48Z","article_processing_charge":"No","department":[{"_id":"GradSch"},{"_id":"MaMo"}],"oa_version":"Preprint","publication_status":"submitted","language":[{"iso":"eng"}]},{"year":"2022","citation":{"ieee":"A. Schlögl, A. Hornoiu, S. Elefante, and S. Stadlbauer, “Where is the sweet spot? A procurement story of general purpose compute nodes,” in <i>ASHPC22 - Austrian-Slovenian HPC Meeting 2022</i>, Grundlsee, Austria, 2022, p. 7.","chicago":"Schlögl, Alois, Andrei Hornoiu, Stefano Elefante, and Stephan Stadlbauer. “Where Is the Sweet Spot? A Procurement Story of General Purpose Compute Nodes.” In <i>ASHPC22 - Austrian-Slovenian HPC Meeting 2022</i>, 7. EuroCC Austria c/o Universität Wien, 2022. <a href=\"https://doi.org/10.25365/phaidra.337\">https://doi.org/10.25365/phaidra.337</a>.","ama":"Schlögl A, Hornoiu A, Elefante S, Stadlbauer S. Where is the sweet spot? A procurement story of general purpose compute nodes. In: <i>ASHPC22 - Austrian-Slovenian HPC Meeting 2022</i>. EuroCC Austria c/o Universität Wien; 2022:7. doi:<a href=\"https://doi.org/10.25365/phaidra.337\">10.25365/phaidra.337</a>","apa":"Schlögl, A., Hornoiu, A., Elefante, S., &#38; Stadlbauer, S. (2022). Where is the sweet spot? A procurement story of general purpose compute nodes. In <i>ASHPC22 - Austrian-Slovenian HPC Meeting 2022</i> (p. 7). Grundlsee, Austria: EuroCC Austria c/o Universität Wien. <a href=\"https://doi.org/10.25365/phaidra.337\">https://doi.org/10.25365/phaidra.337</a>","ista":"Schlögl A, Hornoiu A, Elefante S, Stadlbauer S. 2022. Where is the sweet spot? A procurement story of general purpose compute nodes. ASHPC22 - Austrian-Slovenian HPC Meeting 2022. ASHPC: Austrian-Slovenian HPC Meeting, 7.","mla":"Schlögl, Alois, et al. “Where Is the Sweet Spot? A Procurement Story of General Purpose Compute Nodes.” <i>ASHPC22 - Austrian-Slovenian HPC Meeting 2022</i>, EuroCC Austria c/o Universität Wien, 2022, p. 7, doi:<a href=\"https://doi.org/10.25365/phaidra.337\">10.25365/phaidra.337</a>.","short":"A. Schlögl, A. Hornoiu, S. Elefante, S. Stadlbauer, in:, ASHPC22 - Austrian-Slovenian HPC Meeting 2022, EuroCC Austria c/o Universität Wien, 2022, p. 7."},"date_updated":"2023-05-16T07:42:56Z","day":"02","doi":"10.25365/phaidra.337","ddc":["000"],"acknowledgement":"The abstracts in this booklet are licenced under a CC BY 4.0 licence (https://creativecommons.org/licenses/by/4.0/legalcode), except Markus Wallerberger’s contribution at page 21, licenced under a CC BY-SA 4.0 licence (https://creativecommons.org/licenses/by-sa/4.0/legalcode).\r\n","author":[{"first_name":"Alois","last_name":"Schlögl","orcid":"0000-0002-5621-8100","full_name":"Schlögl, Alois","id":"45BF87EE-F248-11E8-B48F-1D18A9856A87"},{"id":"77129392-B450-11EA-8745-D4653DDC885E","last_name":"Hornoiu","first_name":"Andrei","full_name":"Hornoiu, Andrei"},{"full_name":"Elefante, Stefano","last_name":"Elefante","first_name":"Stefano","id":"490F40CE-F248-11E8-B48F-1D18A9856A87"},{"id":"4D0BC184-F248-11E8-B48F-1D18A9856A87","full_name":"Stadlbauer, Stephan","last_name":"Stadlbauer","first_name":"Stephan"}],"_id":"12894","title":"Where is the sweet spot? A procurement story of general purpose compute nodes","article_processing_charge":"No","date_created":"2023-05-05T09:13:42Z","department":[{"_id":"ScienComp"}],"publication_status":"published","file_date_updated":"2023-05-05T09:06:00Z","page":"7","publisher":"EuroCC Austria c/o Universität Wien","type":"conference_abstract","date_published":"2022-06-02T00:00:00Z","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"oa":1,"publication_identifier":{"isbn":["978-3-200-08499-5"]},"status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","file":[{"file_id":"12895","creator":"schloegl","access_level":"open_access","success":1,"relation":"main_file","date_updated":"2023-05-05T09:06:00Z","content_type":"application/pdf","file_name":"BOOKLET_ASHPC22.pdf","date_created":"2023-05-05T09:06:00Z","file_size":7180531,"checksum":"e3f8c240b85422ce2190e7b203cc2563"}],"has_accepted_license":"1","publication":"ASHPC22 - Austrian-Slovenian HPC Meeting 2022","month":"06","oa_version":"Published Version","language":[{"iso":"eng"}],"conference":{"name":"ASHPC: Austrian-Slovenian HPC Meeting","start_date":"2022-05-31","end_date":"2022-06-02","location":"Grundlsee, Austria"}},{"volume":12,"extern":"1","day":"27","doi":"10.1021/acscatal.2c04025","abstract":[{"lang":"eng","text":"Photoredox-mediated Ni-catalyzed cross-couplings are powerful transformations to form carbon–heteroatom bonds and are generally photocatalyzed by noble metal complexes. Low-cost and easy-to-prepare carbon dots (CDs) are attractive quasi-homogeneous photocatalyst alternatives, but their applicability is limited by their short photoluminescence (PL) lifetimes. By tuning the surface and PL properties of CDs, we designed colloidal CD nano-photocatalysts for a broad range of Ni-mediated cross-couplings between aryl halides and nucleophiles. In particular, a CD decorated with amino groups permitted coupling to a wide range of aryl halides and thiols under mild, base-free conditions. Mechanistic studies suggested dynamic quenching of the CD excited state by the Ni co-catalyst and identified that pyridinium iodide (pyHI), a previously used additive in metallaphotocatalyzed cross-couplings, can also act as a photocatalyst in such transformations."}],"year":"2022","citation":{"ista":"Zhao Z, Pieber B, Delbianco M. 2022. Modulating the surface and photophysical properties of carbon dots to access colloidal photocatalysts for cross-couplings. ACS Catalysis. 12(22), 13831–13837.","short":"Z. Zhao, B. Pieber, M. Delbianco, ACS Catalysis 12 (2022) 13831–13837.","mla":"Zhao, Zhouxiang, et al. “Modulating the Surface and Photophysical Properties of Carbon Dots to Access Colloidal Photocatalysts for Cross-Couplings.” <i>ACS Catalysis</i>, vol. 12, no. 22, American Chemical Society, 2022, pp. 13831–37, doi:<a href=\"https://doi.org/10.1021/acscatal.2c04025\">10.1021/acscatal.2c04025</a>.","chicago":"Zhao, Zhouxiang, Bartholomäus Pieber, and Martina Delbianco. “Modulating the Surface and Photophysical Properties of Carbon Dots to Access Colloidal Photocatalysts for Cross-Couplings.” <i>ACS Catalysis</i>. American Chemical Society, 2022. <a href=\"https://doi.org/10.1021/acscatal.2c04025\">https://doi.org/10.1021/acscatal.2c04025</a>.","ieee":"Z. Zhao, B. Pieber, and M. Delbianco, “Modulating the surface and photophysical properties of carbon dots to access colloidal photocatalysts for cross-couplings,” <i>ACS Catalysis</i>, vol. 12, no. 22. American Chemical Society, pp. 13831–13837, 2022.","apa":"Zhao, Z., Pieber, B., &#38; Delbianco, M. (2022). Modulating the surface and photophysical properties of carbon dots to access colloidal photocatalysts for cross-couplings. <i>ACS Catalysis</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acscatal.2c04025\">https://doi.org/10.1021/acscatal.2c04025</a>","ama":"Zhao Z, Pieber B, Delbianco M. Modulating the surface and photophysical properties of carbon dots to access colloidal photocatalysts for cross-couplings. <i>ACS Catalysis</i>. 2022;12(22):13831-13837. doi:<a href=\"https://doi.org/10.1021/acscatal.2c04025\">10.1021/acscatal.2c04025</a>"},"date_updated":"2023-05-15T08:30:13Z","publisher":"American Chemical Society","article_type":"original","quality_controlled":"1","page":"13831-13837","article_processing_charge":"No","date_created":"2023-05-08T08:28:54Z","publication_status":"published","intvolume":"        12","title":"Modulating the surface and photophysical properties of carbon dots to access colloidal photocatalysts for cross-couplings","scopus_import":"1","_id":"12923","issue":"22","author":[{"full_name":"Zhao, Zhouxiang","first_name":"Zhouxiang","last_name":"Zhao"},{"first_name":"Bartholomäus","last_name":"Pieber","orcid":"0000-0001-8689-388X","full_name":"Pieber, Bartholomäus","id":"93e5e5b2-0da6-11ed-8a41-af589a024726"},{"first_name":"Martina","last_name":"Delbianco","full_name":"Delbianco, Martina"}],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1021/acscatal.2c04025"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","publication_identifier":{"eissn":["2155-5435"]},"oa":1,"type":"journal_article","date_published":"2022-10-27T00:00:00Z","keyword":["Catalysis","General Chemistry"],"language":[{"iso":"eng"}],"oa_version":"Published Version","month":"10","publication":"ACS Catalysis"},{"keyword":["General Chemistry","Catalysis"],"language":[{"iso":"eng"}],"article_number":"e202211433","month":"11","oa_version":"Published Version","publication":"Angewandte Chemie International Edition","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","main_file_link":[{"url":"https://doi.org/10.1002/anie.202211433","open_access":"1"}],"oa":1,"publication_identifier":{"eissn":["1521-3773"],"issn":["1433-7851"]},"type":"journal_article","date_published":"2022-11-14T00:00:00Z","article_type":"original","publisher":"Wiley","quality_controlled":"1","intvolume":"        61","title":"Intraligand charge transfer enables visible‐light‐mediated Nickel‐catalyzed cross-coupling reactions","article_processing_charge":"No","date_created":"2023-05-08T08:30:11Z","publication_status":"published","issue":"46","author":[{"last_name":"Cavedon","first_name":"Cristian","full_name":"Cavedon, Cristian"},{"full_name":"Gisbertz, Sebastian","first_name":"Sebastian","last_name":"Gisbertz"},{"full_name":"Reischauer, Susanne","first_name":"Susanne","last_name":"Reischauer"},{"first_name":"Sarah","last_name":"Vogl","full_name":"Vogl, Sarah"},{"last_name":"Sperlich","first_name":"Eric","full_name":"Sperlich, Eric"},{"last_name":"Burke","first_name":"John H.","full_name":"Burke, John H."},{"first_name":"Rachel F.","last_name":"Wallick","full_name":"Wallick, Rachel F."},{"full_name":"Schrottke, Stefanie","first_name":"Stefanie","last_name":"Schrottke"},{"full_name":"Hsu, Wei‐Hsin","first_name":"Wei‐Hsin","last_name":"Hsu"},{"last_name":"Anghileri","first_name":"Lucia","full_name":"Anghileri, Lucia"},{"full_name":"Pfeifer, Yannik","last_name":"Pfeifer","first_name":"Yannik"},{"full_name":"Richter, Noah","first_name":"Noah","last_name":"Richter"},{"first_name":"Christian","last_name":"Teutloff","full_name":"Teutloff, Christian"},{"last_name":"Müller‐Werkmeister","first_name":"Henrike","full_name":"Müller‐Werkmeister, Henrike"},{"full_name":"Cambié, Dario","first_name":"Dario","last_name":"Cambié"},{"last_name":"Seeberger","first_name":"Peter H.","full_name":"Seeberger, Peter H."},{"last_name":"Vura‐Weis","first_name":"Josh","full_name":"Vura‐Weis, Josh"},{"full_name":"van der Veen, Renske M.","first_name":"Renske M.","last_name":"van der Veen"},{"full_name":"Thomas, Arne","last_name":"Thomas","first_name":"Arne"},{"id":"93e5e5b2-0da6-11ed-8a41-af589a024726","last_name":"Pieber","first_name":"Bartholomäus","full_name":"Pieber, Bartholomäus","orcid":"0000-0001-8689-388X"}],"scopus_import":"1","_id":"12924","extern":"1","volume":61,"abstract":[{"text":"We demonstrate that several visible-light-mediated carbon−heteroatom cross-coupling reactions can be carried out using a photoactive NiII precatalyst that forms in situ from a nickel salt and a bipyridine ligand decorated with two carbazole groups (Ni(Czbpy)Cl2). The activation of this precatalyst towards cross-coupling reactions follows a hitherto undisclosed mechanism that is different from previously reported light-responsive nickel complexes that undergo metal-to-ligand charge transfer. Theoretical and spectroscopic investigations revealed that irradiation of Ni(Czbpy)Cl2 with visible light causes an initial intraligand charge transfer event that triggers productive catalysis. Ligand polymerization affords a porous, recyclable organic polymer for heterogeneous nickel catalysis of cross-coupling reactions. The heterogeneous catalyst shows stable performance in a packed-bed flow reactor during a week of continuous operation.","lang":"eng"}],"day":"14","doi":"10.1002/anie.202211433","year":"2022","citation":{"ista":"Cavedon C, Gisbertz S, Reischauer S, Vogl S, Sperlich E, Burke JH, Wallick RF, Schrottke S, Hsu W, Anghileri L, Pfeifer Y, Richter N, Teutloff C, Müller‐Werkmeister H, Cambié D, Seeberger PH, Vura‐Weis J, van der Veen RM, Thomas A, Pieber B. 2022. Intraligand charge transfer enables visible‐light‐mediated Nickel‐catalyzed cross-coupling reactions. Angewandte Chemie International Edition. 61(46), e202211433.","mla":"Cavedon, Cristian, et al. “Intraligand Charge Transfer Enables Visible‐light‐mediated Nickel‐catalyzed Cross-Coupling Reactions.” <i>Angewandte Chemie International Edition</i>, vol. 61, no. 46, e202211433, Wiley, 2022, doi:<a href=\"https://doi.org/10.1002/anie.202211433\">10.1002/anie.202211433</a>.","short":"C. Cavedon, S. Gisbertz, S. Reischauer, S. Vogl, E. Sperlich, J.H. Burke, R.F. Wallick, S. Schrottke, W. Hsu, L. Anghileri, Y. Pfeifer, N. Richter, C. Teutloff, H. Müller‐Werkmeister, D. Cambié, P.H. Seeberger, J. Vura‐Weis, R.M. van der Veen, A. Thomas, B. Pieber, Angewandte Chemie International Edition 61 (2022).","ieee":"C. Cavedon <i>et al.</i>, “Intraligand charge transfer enables visible‐light‐mediated Nickel‐catalyzed cross-coupling reactions,” <i>Angewandte Chemie International Edition</i>, vol. 61, no. 46. Wiley, 2022.","chicago":"Cavedon, Cristian, Sebastian Gisbertz, Susanne Reischauer, Sarah Vogl, Eric Sperlich, John H. Burke, Rachel F. Wallick, et al. “Intraligand Charge Transfer Enables Visible‐light‐mediated Nickel‐catalyzed Cross-Coupling Reactions.” <i>Angewandte Chemie International Edition</i>. Wiley, 2022. <a href=\"https://doi.org/10.1002/anie.202211433\">https://doi.org/10.1002/anie.202211433</a>.","apa":"Cavedon, C., Gisbertz, S., Reischauer, S., Vogl, S., Sperlich, E., Burke, J. H., … Pieber, B. (2022). Intraligand charge transfer enables visible‐light‐mediated Nickel‐catalyzed cross-coupling reactions. <i>Angewandte Chemie International Edition</i>. Wiley. <a href=\"https://doi.org/10.1002/anie.202211433\">https://doi.org/10.1002/anie.202211433</a>","ama":"Cavedon C, Gisbertz S, Reischauer S, et al. Intraligand charge transfer enables visible‐light‐mediated Nickel‐catalyzed cross-coupling reactions. <i>Angewandte Chemie International Edition</i>. 2022;61(46). doi:<a href=\"https://doi.org/10.1002/anie.202211433\">10.1002/anie.202211433</a>"},"date_updated":"2023-05-15T08:27:25Z"},{"volume":24,"extern":"1","year":"2022","citation":{"ista":"Gamper J, Kluibenschedl F, Weiss AKH, Hofer TS. 2022. From vibrational spectroscopy and quantum tunnelling to periodic band structures – a self-supervised, all-purpose neural network approach to general quantum problems. Physical Chemistry Chemical Physics. 24(41), 25191–25202.","short":"J. Gamper, F. Kluibenschedl, A.K.H. Weiss, T.S. Hofer, Physical Chemistry Chemical Physics 24 (2022) 25191–25202.","mla":"Gamper, Jakob, et al. “From Vibrational Spectroscopy and Quantum Tunnelling to Periodic Band Structures – a Self-Supervised, All-Purpose Neural Network Approach to General Quantum Problems.” <i>Physical Chemistry Chemical Physics</i>, vol. 24, no. 41, Royal Society of Chemistry, 2022, pp. 25191–202, doi:<a href=\"https://doi.org/10.1039/d2cp03921d\">10.1039/d2cp03921d</a>.","chicago":"Gamper, Jakob, Florian Kluibenschedl, Alexander K. H. Weiss, and Thomas S. Hofer. “From Vibrational Spectroscopy and Quantum Tunnelling to Periodic Band Structures – a Self-Supervised, All-Purpose Neural Network Approach to General Quantum Problems.” <i>Physical Chemistry Chemical Physics</i>. Royal Society of Chemistry, 2022. <a href=\"https://doi.org/10.1039/d2cp03921d\">https://doi.org/10.1039/d2cp03921d</a>.","ieee":"J. Gamper, F. Kluibenschedl, A. K. H. Weiss, and T. S. Hofer, “From vibrational spectroscopy and quantum tunnelling to periodic band structures – a self-supervised, all-purpose neural network approach to general quantum problems,” <i>Physical Chemistry Chemical Physics</i>, vol. 24, no. 41. Royal Society of Chemistry, pp. 25191–25202, 2022.","apa":"Gamper, J., Kluibenschedl, F., Weiss, A. K. H., &#38; Hofer, T. S. (2022). From vibrational spectroscopy and quantum tunnelling to periodic band structures – a self-supervised, all-purpose neural network approach to general quantum problems. <i>Physical Chemistry Chemical Physics</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/d2cp03921d\">https://doi.org/10.1039/d2cp03921d</a>","ama":"Gamper J, Kluibenschedl F, Weiss AKH, Hofer TS. From vibrational spectroscopy and quantum tunnelling to periodic band structures – a self-supervised, all-purpose neural network approach to general quantum problems. <i>Physical Chemistry Chemical Physics</i>. 2022;24(41):25191-25202. doi:<a href=\"https://doi.org/10.1039/d2cp03921d\">10.1039/d2cp03921d</a>"},"date_updated":"2023-05-15T07:54:08Z","external_id":{"pmid":["36254856"]},"day":"04","doi":"10.1039/d2cp03921d","abstract":[{"text":"In this work, a feed-forward artificial neural network (FF-ANN) design capable of locating eigensolutions to Schrödinger's equation via self-supervised learning is outlined. Based on the input potential determining the nature of the quantum problem, the presented FF-ANN strategy identifies valid solutions solely by minimizing Schrödinger's equation encoded in a suitably designed global loss function. In addition to benchmark calculations of prototype systems with known analytical solutions, the outlined methodology was also applied to experimentally accessible quantum systems, such as the vibrational states of molecular hydrogen H2 and its isotopologues HD and D2 as well as the torsional tunnel splitting in the phenol molecule. It is shown that in conjunction with the use of SIREN activation functions a high accuracy in the energy eigenvalues and wavefunctions is achieved without the requirement to adjust the implementation to the vastly different range of input potentials, thereby even considering problems under periodic boundary conditions.","lang":"eng"}],"quality_controlled":"1","page":"25191-25202","publisher":"Royal Society of Chemistry","article_type":"original","scopus_import":"1","pmid":1,"_id":"12938","issue":"41","author":[{"full_name":"Gamper, Jakob","last_name":"Gamper","first_name":"Jakob"},{"id":"7499e70e-eb2c-11ec-b98b-f925648bc9d9","last_name":"Kluibenschedl","first_name":"Florian","full_name":"Kluibenschedl, Florian"},{"first_name":"Alexander K. H.","last_name":"Weiss","full_name":"Weiss, Alexander K. H."},{"first_name":"Thomas S.","last_name":"Hofer","full_name":"Hofer, Thomas S."}],"article_processing_charge":"No","date_created":"2023-05-10T14:48:46Z","publication_status":"published","intvolume":"        24","title":"From vibrational spectroscopy and quantum tunnelling to periodic band structures – a self-supervised, all-purpose neural network approach to general quantum problems","main_file_link":[{"url":"https://doi.org/10.1039/D2CP03921D","open_access":"1"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","type":"journal_article","date_published":"2022-10-04T00:00:00Z","publication_identifier":{"issn":["1463-9076","1463-9084"]},"oa":1,"keyword":["Physical and Theoretical Chemistry","General Physics and Astronomy"],"language":[{"iso":"eng"}],"publication":"Physical Chemistry Chemical Physics","oa_version":"Published Version","month":"10"},{"author":[{"id":"3A8E7F24-F248-11E8-B48F-1D18A9856A87","last_name":"Assen","first_name":"Frank P","full_name":"Assen, Frank P","orcid":"0000-0003-3470-6119"},{"last_name":"Abe","first_name":"Jun","full_name":"Abe, Jun"},{"full_name":"Hons, Miroslav","orcid":"0000-0002-6625-3348","last_name":"Hons","first_name":"Miroslav","id":"4167FE56-F248-11E8-B48F-1D18A9856A87"},{"id":"4E01D6B4-F248-11E8-B48F-1D18A9856A87","full_name":"Hauschild, Robert","orcid":"0000-0001-9843-3522","last_name":"Hauschild","first_name":"Robert"},{"first_name":"Shayan","last_name":"Shamipour","full_name":"Shamipour, Shayan","id":"40B34FE2-F248-11E8-B48F-1D18A9856A87"},{"id":"3F99E422-F248-11E8-B48F-1D18A9856A87","first_name":"Walter","last_name":"Kaufmann","orcid":"0000-0001-9735-5315","full_name":"Kaufmann, Walter"},{"id":"D93824F4-D9BA-11E9-BB12-F207E6697425","last_name":"Costanzo","first_name":"Tommaso","full_name":"Costanzo, Tommaso","orcid":"0000-0001-9732-3815"},{"last_name":"Krens","first_name":"Gabriel","full_name":"Krens, Gabriel","orcid":"0000-0003-4761-5996","id":"2B819732-F248-11E8-B48F-1D18A9856A87"},{"id":"3DAB9AFC-F248-11E8-B48F-1D18A9856A87","first_name":"Markus","last_name":"Brown","full_name":"Brown, Markus"},{"full_name":"Ludewig, Burkhard","first_name":"Burkhard","last_name":"Ludewig"},{"full_name":"Hippenmeyer, Simon","orcid":"0000-0003-2279-1061","last_name":"Hippenmeyer","first_name":"Simon","id":"37B36620-F248-11E8-B48F-1D18A9856A87"},{"id":"39427864-F248-11E8-B48F-1D18A9856A87","last_name":"Heisenberg","first_name":"Carl-Philipp J","full_name":"Heisenberg, Carl-Philipp J","orcid":"0000-0002-0912-4566"},{"first_name":"Wolfgang","last_name":"Weninger","full_name":"Weninger, Wolfgang"},{"id":"3A9DB764-F248-11E8-B48F-1D18A9856A87","last_name":"Hannezo","first_name":"Edouard B","full_name":"Hannezo, Edouard B","orcid":"0000-0001-6005-1561"},{"full_name":"Luther, Sanjiv A.","last_name":"Luther","first_name":"Sanjiv A."},{"full_name":"Stein, Jens V.","first_name":"Jens V.","last_name":"Stein"},{"last_name":"Sixt","first_name":"Michael K","full_name":"Sixt, Michael K","orcid":"0000-0002-4561-241X","id":"41E9FBEA-F248-11E8-B48F-1D18A9856A87"}],"_id":"9794","scopus_import":"1","title":"Multitier mechanics control stromal adaptations in swelling lymph nodes","intvolume":"        23","publication_status":"published","department":[{"_id":"SiHi"},{"_id":"CaHe"},{"_id":"EdHa"},{"_id":"EM-Fac"},{"_id":"Bio"},{"_id":"MiSi"}],"date_created":"2021-08-06T09:09:11Z","article_processing_charge":"No","file_date_updated":"2022-07-25T07:11:32Z","page":"1246-1255","ec_funded":1,"quality_controlled":"1","article_type":"original","publisher":"Springer Nature","isi":1,"external_id":{"isi":["000822975900002"]},"date_updated":"2023-08-02T06:53:07Z","citation":{"ama":"Assen FP, Abe J, Hons M, et al. Multitier mechanics control stromal adaptations in swelling lymph nodes. <i>Nature Immunology</i>. 2022;23:1246-1255. doi:<a href=\"https://doi.org/10.1038/s41590-022-01257-4\">10.1038/s41590-022-01257-4</a>","apa":"Assen, F. P., Abe, J., Hons, M., Hauschild, R., Shamipour, S., Kaufmann, W., … Sixt, M. K. (2022). Multitier mechanics control stromal adaptations in swelling lymph nodes. <i>Nature Immunology</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41590-022-01257-4\">https://doi.org/10.1038/s41590-022-01257-4</a>","ieee":"F. P. Assen <i>et al.</i>, “Multitier mechanics control stromal adaptations in swelling lymph nodes,” <i>Nature Immunology</i>, vol. 23. Springer Nature, pp. 1246–1255, 2022.","chicago":"Assen, Frank P, Jun Abe, Miroslav Hons, Robert Hauschild, Shayan Shamipour, Walter Kaufmann, Tommaso Costanzo, et al. “Multitier Mechanics Control Stromal Adaptations in Swelling Lymph Nodes.” <i>Nature Immunology</i>. Springer Nature, 2022. <a href=\"https://doi.org/10.1038/s41590-022-01257-4\">https://doi.org/10.1038/s41590-022-01257-4</a>.","short":"F.P. Assen, J. Abe, M. Hons, R. Hauschild, S. Shamipour, W. Kaufmann, T. Costanzo, G. Krens, M. Brown, B. Ludewig, S. Hippenmeyer, C.-P.J. Heisenberg, W. Weninger, E.B. Hannezo, S.A. Luther, J.V. Stein, M.K. Sixt, Nature Immunology 23 (2022) 1246–1255.","mla":"Assen, Frank P., et al. “Multitier Mechanics Control Stromal Adaptations in Swelling Lymph Nodes.” <i>Nature Immunology</i>, vol. 23, Springer Nature, 2022, pp. 1246–55, doi:<a href=\"https://doi.org/10.1038/s41590-022-01257-4\">10.1038/s41590-022-01257-4</a>.","ista":"Assen FP, Abe J, Hons M, Hauschild R, Shamipour S, Kaufmann W, Costanzo T, Krens G, Brown M, Ludewig B, Hippenmeyer S, Heisenberg C-PJ, Weninger W, Hannezo EB, Luther SA, Stein JV, Sixt MK. 2022. Multitier mechanics control stromal adaptations in swelling lymph nodes. Nature Immunology. 23, 1246–1255."},"year":"2022","abstract":[{"lang":"eng","text":"Lymph nodes (LNs) comprise two main structural elements: fibroblastic reticular cells that form dedicated niches for immune cell interaction and capsular fibroblasts that build a shell around the organ. Immunological challenge causes LNs to increase more than tenfold in size within a few days. Here, we characterized the biomechanics of LN swelling on the cellular and organ scale. We identified lymphocyte trapping by influx and proliferation as drivers of an outward pressure force, causing fibroblastic reticular cells of the T-zone (TRCs) and their associated conduits to stretch. After an initial phase of relaxation, TRCs sensed the resulting strain through cell matrix adhesions, which coordinated local growth and remodeling of the stromal network. While the expanded TRC network readopted its typical configuration, a massive fibrotic reaction of the organ capsule set in and countered further organ expansion. Thus, different fibroblast populations mechanically control LN swelling in a multitier fashion."}],"doi":"10.1038/s41590-022-01257-4","day":"11","ddc":["570"],"volume":23,"acknowledgement":"This research was supported by the Scientific Service Units of IST Austria through resources provided by the Imaging and Optics, Electron Microscopy, Preclinical and Life Science Facilities. We thank C. Moussion for providing anti-PNAd antibody and D. Critchley for Talin1-floxed mice, and E. Papusheva for providing a custom 3D channel alignment script. This work was supported by a European Research Council grant ERC-CoG-72437 to M.S. M.H. was supported by Czech Sciencundation GACR 20-24603Y and Charles University PRIMUS/20/MED/013.","publication":"Nature Immunology","has_accepted_license":"1","month":"07","oa_version":"Published Version","acknowledged_ssus":[{"_id":"Bio"},{"_id":"EM-Fac"},{"_id":"PreCl"},{"_id":"LifeSc"}],"project":[{"name":"Cellular navigation along spatial gradients","grant_number":"724373","call_identifier":"H2020","_id":"25FE9508-B435-11E9-9278-68D0E5697425"}],"language":[{"iso":"eng"}],"date_published":"2022-07-11T00:00:00Z","type":"journal_article","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"oa":1,"publication_identifier":{"issn":["1529-2908"],"eissn":["1529-2916"]},"status":"public","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","file":[{"content_type":"application/pdf","file_name":"2022_NatureImmunology_Assen.pdf","date_updated":"2022-07-25T07:11:32Z","checksum":"628e7b49809f22c75b428842efe70c68","file_size":11475325,"date_created":"2022-07-25T07:11:32Z","creator":"dernst","file_id":"11642","access_level":"open_access","success":1,"relation":"main_file"}]},{"status":"public","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","type":"journal_article","date_published":"2022-02-01T00:00:00Z","publication_identifier":{"issn":["0021-9967"],"eissn":["1096-9861"]},"language":[{"iso":"eng"}],"publication":"Journal of Comparative Neurology","oa_version":"None","month":"02","acknowledgement":"This work was supported by FONDECYT grants 1151432 and 1210169 to Gonzalo J. Marín. FONDECYT grant 1210069 to Jorge Mpodozis. Spanish Ministry of Science, Innovation and Universities (MCIU), State Research Agency (AEI) and European Regional Development Fund (FEDER), PGC2018-098229-B-100 to José L Ferrán. Spanish Ministry of Economy and Competitiveness Excellency Grant BFU2014-57516P (with European Community FEDER support), and a Seneca Foundation (Autonomous Community of Murcia) Excellency Research contract, ref: 19904/ GERM/15; project name: Genoarchitectonic Brain Development and Applications to Neurodegenerative Diseases and Cancer (5672 Fundación Séneca) to Luis Puelles. The authors gratefully acknowledge the valuable editorial help provided by Sara Fernández-Collemann. The authors also thank Elisa Sentis and Solano Henríquez for expert technical help.","volume":530,"citation":{"chicago":"Reyes‐Pinto, Rosana, José L. Ferrán, Tomas A Vega Zuniga, Cristian González‐Cabrera, Harald Luksch, Jorge Mpodozis, Luis Puelles, and Gonzalo J. Marín. “Change in the Neurochemical Signature and Morphological Development of the Parvocellular Isthmic Projection to the Avian Tectum.” <i>Journal of Comparative Neurology</i>. Wiley, 2022. <a href=\"https://doi.org/10.1002/cne.25229\">https://doi.org/10.1002/cne.25229</a>.","ieee":"R. Reyes‐Pinto <i>et al.</i>, “Change in the neurochemical signature and morphological development of the parvocellular isthmic projection to the avian tectum,” <i>Journal of Comparative Neurology</i>, vol. 530, no. 2. Wiley, pp. 553–573, 2022.","ama":"Reyes‐Pinto R, Ferrán JL, Vega Zuniga TA, et al. Change in the neurochemical signature and morphological development of the parvocellular isthmic projection to the avian tectum. <i>Journal of Comparative Neurology</i>. 2022;530(2):553-573. doi:<a href=\"https://doi.org/10.1002/cne.25229\">10.1002/cne.25229</a>","apa":"Reyes‐Pinto, R., Ferrán, J. L., Vega Zuniga, T. A., González‐Cabrera, C., Luksch, H., Mpodozis, J., … Marín, G. J. (2022). Change in the neurochemical signature and morphological development of the parvocellular isthmic projection to the avian tectum. <i>Journal of Comparative Neurology</i>. Wiley. <a href=\"https://doi.org/10.1002/cne.25229\">https://doi.org/10.1002/cne.25229</a>","ista":"Reyes‐Pinto R, Ferrán JL, Vega Zuniga TA, González‐Cabrera C, Luksch H, Mpodozis J, Puelles L, Marín GJ. 2022. Change in the neurochemical signature and morphological development of the parvocellular isthmic projection to the avian tectum. Journal of Comparative Neurology. 530(2), 553–573.","short":"R. Reyes‐Pinto, J.L. Ferrán, T.A. Vega Zuniga, C. González‐Cabrera, H. Luksch, J. Mpodozis, L. Puelles, G.J. Marín, Journal of Comparative Neurology 530 (2022) 553–573.","mla":"Reyes‐Pinto, Rosana, et al. “Change in the Neurochemical Signature and Morphological Development of the Parvocellular Isthmic Projection to the Avian Tectum.” <i>Journal of Comparative Neurology</i>, vol. 530, no. 2, Wiley, 2022, pp. 553–73, doi:<a href=\"https://doi.org/10.1002/cne.25229\">10.1002/cne.25229</a>."},"year":"2022","date_updated":"2023-08-11T10:58:17Z","external_id":{"isi":["000686420000001"],"pmid":["34363623"]},"isi":1,"day":"01","doi":"10.1002/cne.25229","abstract":[{"text":"Neurons can change their classical neurotransmitters during ontogeny, sometimes going through stages of dual release. Here, we explored the development of the neurotransmitter identity of neurons of the avian nucleus isthmi parvocellularis (Ipc), whose axon terminals are retinotopically arranged in the optic tectum (TeO) and exert a focal gating effect upon the ascending transmission of retinal inputs. Although cholinergic and glutamatergic markers are both found in Ipc neurons and terminals of adult pigeons and chicks, the mRNA expression of the vesicular acetylcholine transporter, VAChT, is weak or absent. To explore how the Ipc neurotransmitter identity is established during ontogeny, we analyzed the expression of mRNAs coding for cholinergic (ChAT, VAChT, and CHT) and glutamatergic (VGluT2 and VGluT3) markers in chick embryos at different developmental stages. We found that between E12 and E18, Ipc neurons expressed all cholinergic mRNAs and also VGluT2 mRNA; however, from E16 through posthatch stages, VAChT mRNA expression was specifically diminished. Our ex vivo deposits of tracer crystals and intracellular filling experiments revealed that Ipc axons exhibit a mature paintbrush morphology late in development, experiencing marked morphological transformations during the period of presumptive dual vesicular transmitter release. Additionally, although ChAT protein immunoassays increasingly label the growing Ipc axon, this labeling was consistently restricted to sparse portions of the terminal branches. Combined, these results suggest that the synthesis of glutamate and acetylcholine, and their vesicular release, is complexly linked to the developmental processes of branching, growing and remodeling of these unique axons.","lang":"eng"}],"quality_controlled":"1","page":"553-573","publisher":"Wiley","article_type":"original","scopus_import":"1","_id":"9955","pmid":1,"issue":"2","author":[{"first_name":"Rosana","last_name":"Reyes‐Pinto","full_name":"Reyes‐Pinto, Rosana"},{"full_name":"Ferrán, José L.","first_name":"José L.","last_name":"Ferrán"},{"id":"2E7C4E78-F248-11E8-B48F-1D18A9856A87","full_name":"Vega Zuniga, Tomas A","last_name":"Vega Zuniga","first_name":"Tomas A"},{"last_name":"González‐Cabrera","first_name":"Cristian","full_name":"González‐Cabrera, Cristian"},{"first_name":"Harald","last_name":"Luksch","full_name":"Luksch, Harald"},{"full_name":"Mpodozis, Jorge","last_name":"Mpodozis","first_name":"Jorge"},{"first_name":"Luis","last_name":"Puelles","full_name":"Puelles, Luis"},{"full_name":"Marín, Gonzalo J.","last_name":"Marín","first_name":"Gonzalo J."}],"department":[{"_id":"MaJö"}],"article_processing_charge":"No","date_created":"2021-08-23T08:40:59Z","publication_status":"published","intvolume":"       530","title":"Change in the neurochemical signature and morphological development of the parvocellular isthmic projection to the avian tectum"}]
