---
_id: '2442'
abstract:
- lang: eng
  text: In a new study published in this issue of Developmental Cell, Krouk et al.
    reveal a surprising mechanism by which plant root systems adapt their architecture
    for soil exploitation. The dual transporter NRT1.1 uses both nitrate and the plant
    hormone auxin as substrates, enabling soil nitrate availability to regulate auxin-driven
    lateral root development.
author:
- first_name: Tom
  full_name: Beeckman, Tom
  last_name: Beeckman
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: 'Beeckman T, Friml J. Nitrate Contra Auxin: Nutrient Sensing by roots. <i>Developmental
    Cell</i>. 2010;18(6):877-878. doi:<a href="https://doi.org/10.1016/j.devcel.2010.05.020">10.1016/j.devcel.2010.05.020</a>'
  apa: 'Beeckman, T., &#38; Friml, J. (2010). Nitrate Contra Auxin: Nutrient Sensing
    by roots. <i>Developmental Cell</i>. Cell Press. <a href="https://doi.org/10.1016/j.devcel.2010.05.020">https://doi.org/10.1016/j.devcel.2010.05.020</a>'
  chicago: 'Beeckman, Tom, and Jiří Friml. “Nitrate Contra Auxin: Nutrient Sensing
    by Roots.” <i>Developmental Cell</i>. Cell Press, 2010. <a href="https://doi.org/10.1016/j.devcel.2010.05.020">https://doi.org/10.1016/j.devcel.2010.05.020</a>.'
  ieee: 'T. Beeckman and J. Friml, “Nitrate Contra Auxin: Nutrient Sensing by roots,”
    <i>Developmental Cell</i>, vol. 18, no. 6. Cell Press, pp. 877–878, 2010.'
  ista: 'Beeckman T, Friml J. 2010. Nitrate Contra Auxin: Nutrient Sensing by roots.
    Developmental Cell. 18(6), 877–878.'
  mla: 'Beeckman, Tom, and Jiří Friml. “Nitrate Contra Auxin: Nutrient Sensing by
    Roots.” <i>Developmental Cell</i>, vol. 18, no. 6, Cell Press, 2010, pp. 877–78,
    doi:<a href="https://doi.org/10.1016/j.devcel.2010.05.020">10.1016/j.devcel.2010.05.020</a>.'
  short: T. Beeckman, J. Friml, Developmental Cell 18 (2010) 877–878.
date_created: 2018-12-11T11:57:41Z
date_published: 2010-06-15T00:00:00Z
date_updated: 2021-01-12T06:57:31Z
day: '15'
doi: 10.1016/j.devcel.2010.05.020
extern: '1'
external_id:
  pmid:
  - '    20627068'
intvolume: '        18'
issue: '6'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pubmed/20627068
month: '06'
oa: 1
oa_version: Published Version
page: 877 - 878
pmid: 1
publication: Developmental Cell
publication_status: published
publisher: Cell Press
publist_id: '4461'
quality_controlled: '1'
status: public
title: 'Nitrate Contra Auxin: Nutrient Sensing by roots'
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 18
year: '2010'
...
---
_id: '2503'
abstract:
- lang: eng
  text: Epilepsy is a devastating and poorly understood disease. Mutations in a secreted
    neuronal protein, leucine-rich glioma inactivated 1 (LGI1), were reported in patients
    with an inherited form of human epilepsy, autosomal dominant partial epilepsy
    with auditory features (ADPEAF). Here, we report an essential role of LGI1 as
    an antiepileptogenic ligand. We find that loss of LGI1 in mice (LGI1-/-) causes
    lethal epilepsy, which is specifically rescued by the neuronal expression of LGI1
    transgene, but not LGI3. Moreover, heterozygous mice for the LGI1 mutation (LGI1+/-)
    show lowered seizure thresholds. Extracellularly secreted LGI1 links two epilepsy-related
    receptors, ADAM22 and ADAM23, in the brain and organizes a transsynaptic protein
    complex that includes presynaptic potassium channels and postsynaptic AMPA receptor
    scaffolds. A lack of LGI1 disrupts this synaptic protein connection and selectively
    reduces AMPA receptor-mediated synaptic transmission in the hippocampus. Thus,
    LGI1 may serve as a major determinant of brain excitation, and the LGI1 gene-targeted
    mouse provides a good model for human epilepsy.
author:
- first_name: Yuko
  full_name: Fukata, Yuko
  last_name: Fukata
- first_name: Kathryn
  full_name: Lovero, Kathryn L
  last_name: Lovero
- first_name: Tsuyoshi
  full_name: Iwanaga, Tsuyoshi
  last_name: Iwanaga
- first_name: Atsushi
  full_name: Watanabe, Atsushi
  last_name: Watanabe
- first_name: Norihiko
  full_name: Yokoi, Norihiko
  last_name: Yokoi
- first_name: Katsuhiko
  full_name: Tabuchi, Katsuhiko
  last_name: Tabuchi
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Roger
  full_name: Nicoll, Roger A
  last_name: Nicoll
- first_name: Masaki
  full_name: Fukata, Masaki
  last_name: Fukata
citation:
  ama: Fukata Y, Lovero K, Iwanaga T, et al. Disruption of LGI1-linked synaptic complex
    causes abnormal synaptic transmission and epilepsy. <i>PNAS</i>. 2010;107(8):3799-3804.
    doi:<a href="https://doi.org/10.1073/pnas.0914537107">10.1073/pnas.0914537107</a>
  apa: Fukata, Y., Lovero, K., Iwanaga, T., Watanabe, A., Yokoi, N., Tabuchi, K.,
    … Fukata, M. (2010). Disruption of LGI1-linked synaptic complex causes abnormal
    synaptic transmission and epilepsy. <i>PNAS</i>. National Academy of Sciences.
    <a href="https://doi.org/10.1073/pnas.0914537107">https://doi.org/10.1073/pnas.0914537107</a>
  chicago: Fukata, Yuko, Kathryn Lovero, Tsuyoshi Iwanaga, Atsushi Watanabe, Norihiko
    Yokoi, Katsuhiko Tabuchi, Ryuichi Shigemoto, Roger Nicoll, and Masaki Fukata.
    “Disruption of LGI1-Linked Synaptic Complex Causes Abnormal Synaptic Transmission
    and Epilepsy.” <i>PNAS</i>. National Academy of Sciences, 2010. <a href="https://doi.org/10.1073/pnas.0914537107">https://doi.org/10.1073/pnas.0914537107</a>.
  ieee: Y. Fukata <i>et al.</i>, “Disruption of LGI1-linked synaptic complex causes
    abnormal synaptic transmission and epilepsy,” <i>PNAS</i>, vol. 107, no. 8. National
    Academy of Sciences, pp. 3799–3804, 2010.
  ista: Fukata Y, Lovero K, Iwanaga T, Watanabe A, Yokoi N, Tabuchi K, Shigemoto R,
    Nicoll R, Fukata M. 2010. Disruption of LGI1-linked synaptic complex causes abnormal
    synaptic transmission and epilepsy. PNAS. 107(8), 3799–3804.
  mla: Fukata, Yuko, et al. “Disruption of LGI1-Linked Synaptic Complex Causes Abnormal
    Synaptic Transmission and Epilepsy.” <i>PNAS</i>, vol. 107, no. 8, National Academy
    of Sciences, 2010, pp. 3799–804, doi:<a href="https://doi.org/10.1073/pnas.0914537107">10.1073/pnas.0914537107</a>.
  short: Y. Fukata, K. Lovero, T. Iwanaga, A. Watanabe, N. Yokoi, K. Tabuchi, R. Shigemoto,
    R. Nicoll, M. Fukata, PNAS 107 (2010) 3799–3804.
date_created: 2018-12-11T11:58:03Z
date_published: 2010-02-23T00:00:00Z
date_updated: 2021-01-12T06:57:53Z
day: '23'
doi: 10.1073/pnas.0914537107
extern: 1
intvolume: '       107'
issue: '8'
month: '02'
page: 3799 - 3804
publication: PNAS
publication_status: published
publisher: National Academy of Sciences
publist_id: '4398'
quality_controlled: 0
status: public
title: Disruption of LGI1-linked synaptic complex causes abnormal synaptic transmission
  and epilepsy
type: journal_article
volume: 107
year: '2010'
...
---
_id: '2504'
abstract:
- lang: eng
  text: We present a method for immunolabeling of multiple species of membrane proteins
    with high spatial resolution. It allows differentiation of equally sized very
    small markers with different chemical compositions, which leads to high labeling
    efficiency and reduces steric hindrance of closely spaced immunolabeled biomolecules.
    Markers such as CdSe/ZnS semiconductor quantum dots and colloidal gold particles
    are distinguished by differential contrast in high-angle annular detector dark-field
    STEM mode or by EDX microanalysis of their elemental contents. This method was
    tested by observation of labeled AMPA- and NMDA-type glutamate receptors on sodium-dodecyl-sulfate-digested
    replica prepared from rat hippocampus. To improve particle visibility and detectability,
    the replica films were made exclusively with carbon to avoid the high background
    of conventional platinum/carbon replica. Extension of the method is suggested
    by detection of 1.4 nm nanogold particles and its potential application in the
    biological imaging research.
author:
- first_name: Alexandre
  full_name: Loukanov, Alexandre R
  last_name: Loukanov
- first_name: Naomi
  full_name: Kamasawa, Naomi
  last_name: Kamasawa
- first_name: Radostin
  full_name: Danev, Radostin S
  last_name: Danev
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Kuniaki
  full_name: Nagayama, Kuniaki
  last_name: Nagayama
citation:
  ama: Loukanov A, Kamasawa N, Danev R, Shigemoto R, Nagayama K. Immunolocalization
    of multiple membrane proteins on a carbon replica with STEM and EDX. <i>Ultramicroscopy</i>.
    2010;110(4):366-374. doi:<a href="https://doi.org/10.1016/j.ultramic.2010.01.016">10.1016/j.ultramic.2010.01.016</a>
  apa: Loukanov, A., Kamasawa, N., Danev, R., Shigemoto, R., &#38; Nagayama, K. (2010).
    Immunolocalization of multiple membrane proteins on a carbon replica with STEM
    and EDX. <i>Ultramicroscopy</i>. Elsevier. <a href="https://doi.org/10.1016/j.ultramic.2010.01.016">https://doi.org/10.1016/j.ultramic.2010.01.016</a>
  chicago: Loukanov, Alexandre, Naomi Kamasawa, Radostin Danev, Ryuichi Shigemoto,
    and Kuniaki Nagayama. “Immunolocalization of Multiple Membrane Proteins on a Carbon
    Replica with STEM and EDX.” <i>Ultramicroscopy</i>. Elsevier, 2010. <a href="https://doi.org/10.1016/j.ultramic.2010.01.016">https://doi.org/10.1016/j.ultramic.2010.01.016</a>.
  ieee: A. Loukanov, N. Kamasawa, R. Danev, R. Shigemoto, and K. Nagayama, “Immunolocalization
    of multiple membrane proteins on a carbon replica with STEM and EDX,” <i>Ultramicroscopy</i>,
    vol. 110, no. 4. Elsevier, pp. 366–374, 2010.
  ista: Loukanov A, Kamasawa N, Danev R, Shigemoto R, Nagayama K. 2010. Immunolocalization
    of multiple membrane proteins on a carbon replica with STEM and EDX. Ultramicroscopy.
    110(4), 366–374.
  mla: Loukanov, Alexandre, et al. “Immunolocalization of Multiple Membrane Proteins
    on a Carbon Replica with STEM and EDX.” <i>Ultramicroscopy</i>, vol. 110, no.
    4, Elsevier, 2010, pp. 366–74, doi:<a href="https://doi.org/10.1016/j.ultramic.2010.01.016">10.1016/j.ultramic.2010.01.016</a>.
  short: A. Loukanov, N. Kamasawa, R. Danev, R. Shigemoto, K. Nagayama, Ultramicroscopy
    110 (2010) 366–374.
date_created: 2018-12-11T11:58:03Z
date_published: 2010-03-01T00:00:00Z
date_updated: 2021-01-12T06:57:53Z
day: '01'
doi: 10.1016/j.ultramic.2010.01.016
extern: 1
intvolume: '       110'
issue: '4'
month: '03'
page: 366 - 374
publication: Ultramicroscopy
publication_status: published
publisher: Elsevier
publist_id: '4397'
quality_controlled: 0
status: public
title: Immunolocalization of multiple membrane proteins on a carbon replica with STEM
  and EDX
type: journal_article
volume: 110
year: '2010'
...
---
_id: '2505'
abstract:
- lang: eng
  text: Cbln1, secreted from cerebellar granule cells, and the orphan glutamate receptor
    52 (GluD2), expressed by Purkinje cells, are essential for synapse integrity between
    these neurons in adult mice. Nevertheless, no endogenous binding partners for
    these molecules have been identified. We found that Cblnl binds directly to the
    N-terminal domain of GluD2. GluD2 expression by postsynaptic cells, combined with
    exogenously applied Cbln1, was necessary and sufficient to induce new synapses
    in vitro and in the adult cerebellum in vivo. Further, beads coated with recombinant
    Cbln1 directly induced presynaptic differentiation and indirectly caused clustering
    of postsynaptic molecules via GluD2. These results indicate that the Cbln1-GluD2
    complex is a unique synapse organizer that acts bidirectionally on both pre- and
    postsynaptic components.
author:
- first_name: Keiko
  full_name: Matsuda, Keiko
  last_name: Matsuda
- first_name: Eriko
  full_name: Miura, Eriko
  last_name: Miura
- first_name: Taisuke
  full_name: Miyazaki, Taisuke
  last_name: Miyazaki
- first_name: Wataru
  full_name: Kakegawa, Wataru
  last_name: Kakegawa
- first_name: Kyoichi
  full_name: Emi, Kyoichi
  last_name: Emi
- first_name: Sakae
  full_name: Narumi, Sakae
  last_name: Narumi
- first_name: Yugo
  full_name: Fukazawa, Yugo
  last_name: Fukazawa
- first_name: Aya
  full_name: Ito-lshida, Aya
  last_name: Ito Lshida
- first_name: Tetsuro
  full_name: Kondo, Tetsuro
  last_name: Kondo
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Masahiko
  full_name: Watanabe, Masahiko
  last_name: Watanabe
- first_name: Michisuke
  full_name: Yuzaki, Michisuke
  last_name: Yuzaki
citation:
  ama: Matsuda K, Miura E, Miyazaki T, et al. Cbln1 is a ligand for an orphan glutamate
    receptor δ2, a bidirectional synapse organizer. <i>Science</i>. 2010;328(5976):363-368.
    doi:<a href="https://doi.org/10.1126/science.1185152">10.1126/science.1185152</a>
  apa: Matsuda, K., Miura, E., Miyazaki, T., Kakegawa, W., Emi, K., Narumi, S., …
    Yuzaki, M. (2010). Cbln1 is a ligand for an orphan glutamate receptor δ2, a bidirectional
    synapse organizer. <i>Science</i>. American Association for the Advancement of
    Science. <a href="https://doi.org/10.1126/science.1185152">https://doi.org/10.1126/science.1185152</a>
  chicago: Matsuda, Keiko, Eriko Miura, Taisuke Miyazaki, Wataru Kakegawa, Kyoichi
    Emi, Sakae Narumi, Yugo Fukazawa, et al. “Cbln1 Is a Ligand for an Orphan Glutamate
    Receptor Δ2, a Bidirectional Synapse Organizer.” <i>Science</i>. American Association
    for the Advancement of Science, 2010. <a href="https://doi.org/10.1126/science.1185152">https://doi.org/10.1126/science.1185152</a>.
  ieee: K. Matsuda <i>et al.</i>, “Cbln1 is a ligand for an orphan glutamate receptor
    δ2, a bidirectional synapse organizer,” <i>Science</i>, vol. 328, no. 5976. American
    Association for the Advancement of Science, pp. 363–368, 2010.
  ista: Matsuda K, Miura E, Miyazaki T, Kakegawa W, Emi K, Narumi S, Fukazawa Y, Ito
    Lshida A, Kondo T, Shigemoto R, Watanabe M, Yuzaki M. 2010. Cbln1 is a ligand
    for an orphan glutamate receptor δ2, a bidirectional synapse organizer. Science.
    328(5976), 363–368.
  mla: Matsuda, Keiko, et al. “Cbln1 Is a Ligand for an Orphan Glutamate Receptor
    Δ2, a Bidirectional Synapse Organizer.” <i>Science</i>, vol. 328, no. 5976, American
    Association for the Advancement of Science, 2010, pp. 363–68, doi:<a href="https://doi.org/10.1126/science.1185152">10.1126/science.1185152</a>.
  short: K. Matsuda, E. Miura, T. Miyazaki, W. Kakegawa, K. Emi, S. Narumi, Y. Fukazawa,
    A. Ito Lshida, T. Kondo, R. Shigemoto, M. Watanabe, M. Yuzaki, Science 328 (2010)
    363–368.
date_created: 2018-12-11T11:58:04Z
date_published: 2010-04-16T00:00:00Z
date_updated: 2021-01-12T06:57:53Z
day: '16'
doi: 10.1126/science.1185152
extern: 1
intvolume: '       328'
issue: '5976'
month: '04'
page: 363 - 368
publication: Science
publication_status: published
publisher: American Association for the Advancement of Science
publist_id: '4396'
quality_controlled: 0
status: public
title: Cbln1 is a ligand for an orphan glutamate receptor δ2, a bidirectional synapse
  organizer
type: journal_article
volume: 328
year: '2010'
...
---
_id: '2506'
abstract:
- lang: eng
  text: Subepithelial fibroblasts of the intestinal villi, which form a contractile
    cellular network beneath the epithelium, are in close contact with epithelial
    cells, nerve varicosities, capillaries, smooth muscles and immune cells, and secrete
    extracellular matrix molecules, growth factors and cytokines, etc. Cultured subepithelial
    fibroblasts of the rat duodenal villi display various receptors such as endothelins,
    ATP, substance-P and bradykinin, and release ATP in response to mechanical stimulation.
    In this study, the presence of functional NK1 receptors (NK1R) was pharmacologically
    confirmed in primary culture by Ca 2+ measurement, and the effects of substance-P
    were measured in an acute preparation of epithelium-free duodenal villi from 2-
    to 3-week-old rats using a two-photon laser microscope. Substance-P elicited an
    increase in the intracellular Ca 2+ concentration and contraction of the subepithelial
    fibroblasts in culture and the isolated villi. The localization of NK1R and substance-P
    in the villi was examined by light and electron microscopic immunohistochemistry.
    NK1R-like immunoreactivity was intensely localized on the plasma membrane of villous
    subepithelial fibroblasts in 10-day- to 4-week-old rats and mice and was decreased
    or absent in adulthood. The pericryptal fibroblasts of the small and large intestine
    were NK1R immuno-negative. These villous subepithelial fibroblasts form synapse-like
    structures with both substance-P-immunopositive and -immunonegative nerve varicosities.
    Here, we propose that the mutual interaction between villous subepithelial fibroblasts
    and afferent neurons via substance-P and ATP plays important roles in the maturation
    of the structure and function of the small intestine.
author:
- first_name: Sonoko
  full_name: Furuya, Sonoko
  last_name: Furuya
- first_name: Kishio
  full_name: Furuya, Kishio
  last_name: Furuya
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Masahiro
  full_name: Sokabe, Masahiro
  last_name: Sokabe
citation:
  ama: Furuya S, Furuya K, Shigemoto R, Sokabe M. Localization of NK1 receptors and
    roles of substance-P in subepithelial fibroblasts of rat intestinal villi. <i>Cell
    and Tissue Research</i>. 2010;342(2):243-259. doi:<a href="https://doi.org/10.1007/s00441-010-1056-7">10.1007/s00441-010-1056-7</a>
  apa: Furuya, S., Furuya, K., Shigemoto, R., &#38; Sokabe, M. (2010). Localization
    of NK1 receptors and roles of substance-P in subepithelial fibroblasts of rat
    intestinal villi. <i>Cell and Tissue Research</i>. Springer. <a href="https://doi.org/10.1007/s00441-010-1056-7">https://doi.org/10.1007/s00441-010-1056-7</a>
  chicago: Furuya, Sonoko, Kishio Furuya, Ryuichi Shigemoto, and Masahiro Sokabe.
    “Localization of NK1 Receptors and Roles of Substance-P in Subepithelial Fibroblasts
    of Rat Intestinal Villi.” <i>Cell and Tissue Research</i>. Springer, 2010. <a
    href="https://doi.org/10.1007/s00441-010-1056-7">https://doi.org/10.1007/s00441-010-1056-7</a>.
  ieee: S. Furuya, K. Furuya, R. Shigemoto, and M. Sokabe, “Localization of NK1 receptors
    and roles of substance-P in subepithelial fibroblasts of rat intestinal villi,”
    <i>Cell and Tissue Research</i>, vol. 342, no. 2. Springer, pp. 243–259, 2010.
  ista: Furuya S, Furuya K, Shigemoto R, Sokabe M. 2010. Localization of NK1 receptors
    and roles of substance-P in subepithelial fibroblasts of rat intestinal villi.
    Cell and Tissue Research. 342(2), 243–259.
  mla: Furuya, Sonoko, et al. “Localization of NK1 Receptors and Roles of Substance-P
    in Subepithelial Fibroblasts of Rat Intestinal Villi.” <i>Cell and Tissue Research</i>,
    vol. 342, no. 2, Springer, 2010, pp. 243–59, doi:<a href="https://doi.org/10.1007/s00441-010-1056-7">10.1007/s00441-010-1056-7</a>.
  short: S. Furuya, K. Furuya, R. Shigemoto, M. Sokabe, Cell and Tissue Research 342
    (2010) 243–259.
date_created: 2018-12-11T11:58:04Z
date_published: 2010-11-01T00:00:00Z
date_updated: 2021-01-12T06:57:54Z
day: '01'
doi: 10.1007/s00441-010-1056-7
extern: 1
intvolume: '       342'
issue: '2'
month: '11'
page: 243 - 259
publication: Cell and Tissue Research
publication_status: published
publisher: Springer
publist_id: '4395'
quality_controlled: 0
status: public
title: Localization of NK1 receptors and roles of substance-P in subepithelial fibroblasts
  of rat intestinal villi
type: journal_article
volume: 342
year: '2010'
...
---
_id: '2507'
abstract:
- lang: eng
  text: T-type calcium channels play a pivotal role in regulating neural membrane
    excitability in the nervous system. However, the precise subcellular distributions
    of T-type channel subunits and their implication for membrane excitability are
    not well understood. Here we investigated the subcellular distribution of the
    α1G subunit of the calcium channel which is expressed highly in the mouse dorsal
    lateral geniculate nucleus (dLGN). Light microscopic analysis demonstrated that
    dLGN exhibits intense immunoperoxidase reactivity for the α1G subunit. Electron
    microscopic observation showed that the labeling was present in both the relay
    cells and interneurons and was found in the somatodendritic, but not axonal, domains
    of these cells. Most of the immunogold particles for the α1G subunit were either
    associated with the plasma membrane or the intracellular membranes. Reconstruction
    analysis of serial electron microscopic images revealed that the intensity of
    the intracellular labeling exhibited a gradient such that the labeling density
    was higher in the proximal dendrite and progressively decreased towards the distal
    dendrite. In contrast, the plasma membrane-associated particles were distributed
    with a uniform density over the somatodendritic surface of dLGN cells. The labeling
    density in the relay cell plasma membrane was about 3-fold higher than that of
    the interneurons. These results provide ultrastructural evidence for cell-type-specific
    expression levels and for uniform expression density of the α1G subunit over the
    plasma membrane of dLGN cells.
author:
- first_name: Laxmi
  full_name: Parajuli, Laxmi K
  last_name: Parajuli
- first_name: Yugo
  full_name: Fukazawa, Yugo
  last_name: Fukazawa
- first_name: Masahiko
  full_name: Watanabe, Masahiko
  last_name: Watanabe
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
citation:
  ama: Parajuli L, Fukazawa Y, Watanabe M, Shigemoto R. Subcellular distribution of
    α1G subunit of T-type calcium channel in the mouse dorsal lateral geniculate nucleus.
    <i>Journal of Comparative Neurology</i>. 2010;518(21):4362-4374. doi:<a href="https://doi.org/10.1002/cne.22461">10.1002/cne.22461</a>
  apa: Parajuli, L., Fukazawa, Y., Watanabe, M., &#38; Shigemoto, R. (2010). Subcellular
    distribution of α1G subunit of T-type calcium channel in the mouse dorsal lateral
    geniculate nucleus. <i>Journal of Comparative Neurology</i>. Wiley-Blackwell.
    <a href="https://doi.org/10.1002/cne.22461">https://doi.org/10.1002/cne.22461</a>
  chicago: Parajuli, Laxmi, Yugo Fukazawa, Masahiko Watanabe, and Ryuichi Shigemoto.
    “Subcellular Distribution of Α1G Subunit of T-Type Calcium Channel in the Mouse
    Dorsal Lateral Geniculate Nucleus.” <i>Journal of Comparative Neurology</i>. Wiley-Blackwell,
    2010. <a href="https://doi.org/10.1002/cne.22461">https://doi.org/10.1002/cne.22461</a>.
  ieee: L. Parajuli, Y. Fukazawa, M. Watanabe, and R. Shigemoto, “Subcellular distribution
    of α1G subunit of T-type calcium channel in the mouse dorsal lateral geniculate
    nucleus,” <i>Journal of Comparative Neurology</i>, vol. 518, no. 21. Wiley-Blackwell,
    pp. 4362–4374, 2010.
  ista: Parajuli L, Fukazawa Y, Watanabe M, Shigemoto R. 2010. Subcellular distribution
    of α1G subunit of T-type calcium channel in the mouse dorsal lateral geniculate
    nucleus. Journal of Comparative Neurology. 518(21), 4362–4374.
  mla: Parajuli, Laxmi, et al. “Subcellular Distribution of Α1G Subunit of T-Type
    Calcium Channel in the Mouse Dorsal Lateral Geniculate Nucleus.” <i>Journal of
    Comparative Neurology</i>, vol. 518, no. 21, Wiley-Blackwell, 2010, pp. 4362–74,
    doi:<a href="https://doi.org/10.1002/cne.22461">10.1002/cne.22461</a>.
  short: L. Parajuli, Y. Fukazawa, M. Watanabe, R. Shigemoto, Journal of Comparative
    Neurology 518 (2010) 4362–4374.
date_created: 2018-12-11T11:58:04Z
date_published: 2010-11-01T00:00:00Z
date_updated: 2021-01-12T06:57:54Z
day: '01'
doi: 10.1002/cne.22461
extern: 1
intvolume: '       518'
issue: '21'
month: '11'
page: 4362 - 4374
publication: Journal of Comparative Neurology
publication_status: published
publisher: Wiley-Blackwell
publist_id: '4394'
quality_controlled: 0
status: public
title: Subcellular distribution of α1G subunit of T-type calcium channel in the mouse
  dorsal lateral geniculate nucleus
type: journal_article
volume: 518
year: '2010'
...
---
_id: '2508'
abstract:
- lang: eng
  text: 'The activity patterns of subthalamic nucleus (STN) neurons are intimately
    linked to motor function and dysfunction and arise through the complex interaction
    of intrinsic properties and inhibitory and excitatory synaptic inputs. In many
    neurons, hyperpolarization-activated cyclic nucleotide-gated (HCN) channels play
    key roles in intrinsic excitability and synaptic integration both under normal
    conditions and in disease states. However, in STN neurons, which strongly express
    HCN channels, their roles remain relatively obscure. To address this deficit,
    complementary molecular and cellular electrophysiological, imaging, and computational
    approaches were applied to the rat STN. Molecular profiling demonstrated that
    individual STN neurons express mRNA encoding several HCN subunits, with HCN2 and
    3 being the most abundant. Light and electron microscopic analysis showed that
    HCN2 subunits are strongly expressed and distributed throughout the somatodendritic
    plasma membrane. Voltage-, current-, and dynamic-clamp analysis, two-photon Ca
    2+ imaging, and computational modeling revealed that HCN channels are activated
    by GABA A receptor-mediated inputs and thus limit synaptic hyperpolarization and
    deinactivation of low-voltage-activated Ca 2+ channels. Although HCN channels
    also limited the temporal summation of EPSPs, generated through two-photon uncaging
    of glutamate, this action was largely shunted by GABAergic inhibition that was
    necessary for HCN channel activation. Together the data demonstrate that HCN channels
    in STN neurons selectively counteract GABA A receptor-mediated inhibition arising
    from the globus pallidus and thus promote single-spike activity rather than rebound
    burst firing. '
author:
- first_name: Jeremy
  full_name: Atherton, Jeremy F
  last_name: Atherton
- first_name: Katsunori
  full_name: Kitano, Katsunori
  last_name: Kitano
- first_name: Jérôme
  full_name: Baufreton, Jérôme
  last_name: Baufreton
- first_name: Kai
  full_name: Fan, Kai
  last_name: Fan
- first_name: David
  full_name: Wokosin, David L
  last_name: Wokosin
- first_name: Tatiana
  full_name: Tkatch, Tatiana
  last_name: Tkatch
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: James
  full_name: Surmeier, James D
  last_name: Surmeier
- first_name: Mark
  full_name: Bevan, Mark D
  last_name: Bevan
citation:
  ama: Atherton J, Kitano K, Baufreton J, et al. Selective participation of somatodendritic
    HCN channels in inhibitory but not excitatory synaptic integration in neurons
    of the subthalamic nucleus. <i>Journal of Neuroscience</i>. 2010;30(47):16025-16040.
    doi:<a href="https://doi.org/10.1523/JNEUROSCI.3898-10.2010">10.1523/JNEUROSCI.3898-10.2010</a>
  apa: Atherton, J., Kitano, K., Baufreton, J., Fan, K., Wokosin, D., Tkatch, T.,
    … Bevan, M. (2010). Selective participation of somatodendritic HCN channels in
    inhibitory but not excitatory synaptic integration in neurons of the subthalamic
    nucleus. <i>Journal of Neuroscience</i>. Society for Neuroscience. <a href="https://doi.org/10.1523/JNEUROSCI.3898-10.2010">https://doi.org/10.1523/JNEUROSCI.3898-10.2010</a>
  chicago: Atherton, Jeremy, Katsunori Kitano, Jérôme Baufreton, Kai Fan, David Wokosin,
    Tatiana Tkatch, Ryuichi Shigemoto, James Surmeier, and Mark Bevan. “Selective
    Participation of Somatodendritic HCN Channels in Inhibitory but Not Excitatory
    Synaptic Integration in Neurons of the Subthalamic Nucleus.” <i>Journal of Neuroscience</i>.
    Society for Neuroscience, 2010. <a href="https://doi.org/10.1523/JNEUROSCI.3898-10.2010">https://doi.org/10.1523/JNEUROSCI.3898-10.2010</a>.
  ieee: J. Atherton <i>et al.</i>, “Selective participation of somatodendritic HCN
    channels in inhibitory but not excitatory synaptic integration in neurons of the
    subthalamic nucleus,” <i>Journal of Neuroscience</i>, vol. 30, no. 47. Society
    for Neuroscience, pp. 16025–16040, 2010.
  ista: Atherton J, Kitano K, Baufreton J, Fan K, Wokosin D, Tkatch T, Shigemoto R,
    Surmeier J, Bevan M. 2010. Selective participation of somatodendritic HCN channels
    in inhibitory but not excitatory synaptic integration in neurons of the subthalamic
    nucleus. Journal of Neuroscience. 30(47), 16025–16040.
  mla: Atherton, Jeremy, et al. “Selective Participation of Somatodendritic HCN Channels
    in Inhibitory but Not Excitatory Synaptic Integration in Neurons of the Subthalamic
    Nucleus.” <i>Journal of Neuroscience</i>, vol. 30, no. 47, Society for Neuroscience,
    2010, pp. 16025–40, doi:<a href="https://doi.org/10.1523/JNEUROSCI.3898-10.2010">10.1523/JNEUROSCI.3898-10.2010</a>.
  short: J. Atherton, K. Kitano, J. Baufreton, K. Fan, D. Wokosin, T. Tkatch, R. Shigemoto,
    J. Surmeier, M. Bevan, Journal of Neuroscience 30 (2010) 16025–16040.
date_created: 2018-12-11T11:58:05Z
date_published: 2010-11-24T00:00:00Z
date_updated: 2021-01-12T06:57:54Z
day: '24'
doi: 10.1523/JNEUROSCI.3898-10.2010
extern: 1
intvolume: '        30'
issue: '47'
month: '11'
page: 16025 - 16040
publication: Journal of Neuroscience
publication_status: published
publisher: Society for Neuroscience
publist_id: '4393'
quality_controlled: 0
status: public
title: Selective participation of somatodendritic HCN channels in inhibitory but not
  excitatory synaptic integration in neurons of the subthalamic nucleus
type: journal_article
volume: 30
year: '2010'
...
---
_id: '2509'
abstract:
- lang: eng
  text: Hippocampal CA1 pyramidal cells, which receive γ-aminobutyric acid (GABA)ergic
    input from at least 18 types of presynaptic neuron, express 14 subunits of the
    pentameric GABAA receptor. The relative contribution of any subunit to synaptic
    and extrasynaptic receptors influences the dynamics of GABA and drug actions.
    Synaptic receptors mediate phasic GABA-evoked conductance and extrasynaptic receptors
    contribute to a tonic conductance. We used freeze-fracture replica-immunogold
    labelling, a sensitive quantitative immunocytochemical method, to detect synaptic
    and extrasynaptic pools of the alpha1, alpha2 and beta3 subunits. Antibodies to
    the cytoplasmic loop of the subunits showed immunogold particles concentrated
    on distinct clusters of intramembrane particles (IMPs) on the cytoplasmic face
    of the plasma membrane on the somata, dendrites and axon initial segments, with
    an abrupt decrease in labelling at the edge of the IMP cluster. Neuroligin-2,
    a GABAergic synapse-specific adhesion molecule, co-labels all beta3 subunit-rich
    IMP clusters, therefore we considered them synapses. Double-labelling for two
    subunits showed that virtually all somatic synapses contain the alpha1, alpha2
    and beta3 subunits. The extrasynaptic plasma membrane of the somata, dendrites
    and dendritic spines showed low-density immunolabelling. Synaptic labelling densities
    on somata for the alpha1, alpha2 and beta3 subunits were 78-132, 94 and 79 times
    higher than on the extrasynaptic membranes, respectively. As GABAergic synapses
    occupy 0.72% of the soma surface, the fraction of synaptic labelling was 33-48
    (alpha1), 40 (alpha2) and 36 (beta3)% of the total somatic surface immunolabelling.
    Assuming similar antibody access to all receptors, about 60% of these subunits
    are in extrasynaptic receptors.
author:
- first_name: Yu
  full_name: Kasugai, Yu
  last_name: Kasugai
- first_name: Jerome
  full_name: Swinny, Jerome D
  last_name: Swinny
- first_name: John
  full_name: Roberts, John D
  last_name: Roberts
- first_name: Yannis
  full_name: Dalezios, Yannis
  last_name: Dalezios
- first_name: Yugo
  full_name: Fukazawa, Yugo
  last_name: Fukazawa
- first_name: Werner
  full_name: Sieghart, Werner C
  last_name: Sieghart
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Péter
  full_name: Somogyi, Péter
  last_name: Somogyi
citation:
  ama: Kasugai Y, Swinny J, Roberts J, et al. Quantitative localisation of synaptic
    and extrasynaptic GABAA receptor subunits on hippocampal pyramidal cells by freeze-fracture
    replica immunolabelling. <i>European Journal of Neuroscience</i>. 2010;32(11):1868-1888.
    doi:<a href="https://doi.org/10.1111/j.1460-9568.2010.07473.x">10.1111/j.1460-9568.2010.07473.x</a>
  apa: Kasugai, Y., Swinny, J., Roberts, J., Dalezios, Y., Fukazawa, Y., Sieghart,
    W., … Somogyi, P. (2010). Quantitative localisation of synaptic and extrasynaptic
    GABAA receptor subunits on hippocampal pyramidal cells by freeze-fracture replica
    immunolabelling. <i>European Journal of Neuroscience</i>. Wiley-Blackwell. <a
    href="https://doi.org/10.1111/j.1460-9568.2010.07473.x">https://doi.org/10.1111/j.1460-9568.2010.07473.x</a>
  chicago: Kasugai, Yu, Jerome Swinny, John Roberts, Yannis Dalezios, Yugo Fukazawa,
    Werner Sieghart, Ryuichi Shigemoto, and Péter Somogyi. “Quantitative Localisation
    of Synaptic and Extrasynaptic GABAA Receptor Subunits on Hippocampal Pyramidal
    Cells by Freeze-Fracture Replica Immunolabelling.” <i>European Journal of Neuroscience</i>.
    Wiley-Blackwell, 2010. <a href="https://doi.org/10.1111/j.1460-9568.2010.07473.x">https://doi.org/10.1111/j.1460-9568.2010.07473.x</a>.
  ieee: Y. Kasugai <i>et al.</i>, “Quantitative localisation of synaptic and extrasynaptic
    GABAA receptor subunits on hippocampal pyramidal cells by freeze-fracture replica
    immunolabelling,” <i>European Journal of Neuroscience</i>, vol. 32, no. 11. Wiley-Blackwell,
    pp. 1868–1888, 2010.
  ista: Kasugai Y, Swinny J, Roberts J, Dalezios Y, Fukazawa Y, Sieghart W, Shigemoto
    R, Somogyi P. 2010. Quantitative localisation of synaptic and extrasynaptic GABAA
    receptor subunits on hippocampal pyramidal cells by freeze-fracture replica immunolabelling.
    European Journal of Neuroscience. 32(11), 1868–1888.
  mla: Kasugai, Yu, et al. “Quantitative Localisation of Synaptic and Extrasynaptic
    GABAA Receptor Subunits on Hippocampal Pyramidal Cells by Freeze-Fracture Replica
    Immunolabelling.” <i>European Journal of Neuroscience</i>, vol. 32, no. 11, Wiley-Blackwell,
    2010, pp. 1868–88, doi:<a href="https://doi.org/10.1111/j.1460-9568.2010.07473.x">10.1111/j.1460-9568.2010.07473.x</a>.
  short: Y. Kasugai, J. Swinny, J. Roberts, Y. Dalezios, Y. Fukazawa, W. Sieghart,
    R. Shigemoto, P. Somogyi, European Journal of Neuroscience 32 (2010) 1868–1888.
date_created: 2018-12-11T11:58:05Z
date_published: 2010-11-14T00:00:00Z
date_updated: 2021-01-12T06:57:55Z
day: '14'
doi: 10.1111/j.1460-9568.2010.07473.x
extern: 1
intvolume: '        32'
issue: '11'
month: '11'
page: 1868 - 1888
publication: European Journal of Neuroscience
publication_status: published
publisher: Wiley-Blackwell
publist_id: '4392'
quality_controlled: 0
status: public
title: Quantitative localisation of synaptic and extrasynaptic GABAA receptor subunits
  on hippocampal pyramidal cells by freeze-fracture replica immunolabelling
type: journal_article
volume: 32
year: '2010'
...
---
_id: '2510'
abstract:
- lang: eng
  text: Neurons in the laterocapsular division of the central nucleus of the amygdala
    (CeC), which is known as the &quot;nociceptive amygdala,&quot; receive glutamatergic
    inputs from the parabrachial nucleus (PB) and the basolateral nucleus of amygdala
    (BLA), which convey nociceptive information from the dorsal horn of the spinal
    cord and polymodal information from the thalamus and cortex, respectively. Here,
    we examined the ultrastructural properties of PB- and BLA-CeC synapses identified
    with EGFP-expressing lentivirus in rats. In addition, the density of synaptic
    AMPA receptors (AMPARs) on CeC neurons was studied by using highly sensitive SDS-digested
    freeze-fracture replica labeling (SDS-FRL). Afferents from the PB made asymmetrical
    synapses mainly on dendritic shafts (88%), whereas those from the BLA were on
    dendritic spines (81%). PB-CeC synapses in dendritic shafts were significantly
    larger (median 0.072 μm 2) than BLA-CeC synapses in spines (median 0.058 μm 2;
    P = 0.02). The dendritic shafts that made synapses with PB fibers were also significantly
    larger than those that made synapses with BLA fibers, indicating that the PB fibers
    make synapses on more proximal parts of dendrites than the BLA fibers. SDS-FRL
    revealed that almost all excitatory postsynaptic sites have AMPARs in the CeC.
    The density of AMPAR-specific gold particles in individual synapses was significantly
    higher in spine synapses (median 510 particles/μm 2) than in shaft synapses (median
    427 particles/μm 2; P = 0.01). These results suggest that distinct synaptic impacts
    from PB- and BLA-CeC pathways contribute to the integration of nociceptive and
    polymodal information in the CeC.
author:
- first_name: Yu
  full_name: Dong, Yu-Lin
  last_name: Dong
- first_name: Yugo
  full_name: Fukazawa, Yugo
  last_name: Fukazawa
- first_name: Wen
  full_name: Wang, Wen
  last_name: Wang
- first_name: Naomi
  full_name: Kamasawa, Naomi
  last_name: Kamasawa
- first_name: Ryuichi
  full_name: Ryuichi Shigemoto
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
citation:
  ama: Dong Y, Fukazawa Y, Wang W, Kamasawa N, Shigemoto R. Differential postsynaptic
    compartments in the laterocapsular division of the central nucleus of amygdala
    for afferents from the parabrachial nucleus and the basolateral nucleus in the
    rat. <i>Journal of Comparative Neurology</i>. 2010;518(23):4771-4791. doi:<a href="https://doi.org/10.1002/cne.22487">10.1002/cne.22487</a>
  apa: Dong, Y., Fukazawa, Y., Wang, W., Kamasawa, N., &#38; Shigemoto, R. (2010).
    Differential postsynaptic compartments in the laterocapsular division of the central
    nucleus of amygdala for afferents from the parabrachial nucleus and the basolateral
    nucleus in the rat. <i>Journal of Comparative Neurology</i>. Wiley-Blackwell.
    <a href="https://doi.org/10.1002/cne.22487">https://doi.org/10.1002/cne.22487</a>
  chicago: Dong, Yu, Yugo Fukazawa, Wen Wang, Naomi Kamasawa, and Ryuichi Shigemoto.
    “Differential Postsynaptic Compartments in the Laterocapsular Division of the
    Central Nucleus of Amygdala for Afferents from the Parabrachial Nucleus and the
    Basolateral Nucleus in the Rat.” <i>Journal of Comparative Neurology</i>. Wiley-Blackwell,
    2010. <a href="https://doi.org/10.1002/cne.22487">https://doi.org/10.1002/cne.22487</a>.
  ieee: Y. Dong, Y. Fukazawa, W. Wang, N. Kamasawa, and R. Shigemoto, “Differential
    postsynaptic compartments in the laterocapsular division of the central nucleus
    of amygdala for afferents from the parabrachial nucleus and the basolateral nucleus
    in the rat,” <i>Journal of Comparative Neurology</i>, vol. 518, no. 23. Wiley-Blackwell,
    pp. 4771–4791, 2010.
  ista: Dong Y, Fukazawa Y, Wang W, Kamasawa N, Shigemoto R. 2010. Differential postsynaptic
    compartments in the laterocapsular division of the central nucleus of amygdala
    for afferents from the parabrachial nucleus and the basolateral nucleus in the
    rat. Journal of Comparative Neurology. 518(23), 4771–4791.
  mla: Dong, Yu, et al. “Differential Postsynaptic Compartments in the Laterocapsular
    Division of the Central Nucleus of Amygdala for Afferents from the Parabrachial
    Nucleus and the Basolateral Nucleus in the Rat.” <i>Journal of Comparative Neurology</i>,
    vol. 518, no. 23, Wiley-Blackwell, 2010, pp. 4771–91, doi:<a href="https://doi.org/10.1002/cne.22487">10.1002/cne.22487</a>.
  short: Y. Dong, Y. Fukazawa, W. Wang, N. Kamasawa, R. Shigemoto, Journal of Comparative
    Neurology 518 (2010) 4771–4791.
date_created: 2018-12-11T11:58:05Z
date_published: 2010-12-01T00:00:00Z
date_updated: 2021-01-12T06:57:55Z
day: '01'
doi: 10.1002/cne.22487
extern: 1
intvolume: '       518'
issue: '23'
month: '12'
page: 4771 - 4791
publication: Journal of Comparative Neurology
publication_status: published
publisher: Wiley-Blackwell
publist_id: '4391'
quality_controlled: 0
status: public
title: Differential postsynaptic compartments in the laterocapsular division of the
  central nucleus of amygdala for afferents from the parabrachial nucleus and the
  basolateral nucleus in the rat
type: journal_article
volume: 518
year: '2010'
...
---
_id: '2701'
abstract:
- lang: eng
  text: We consider N × N Hermitian random matrices with independent identically distributed
    entries (Wigner matrices). The matrices are normalized so that the average spacing
    between consecutive eigenvalues is of order 1/ N. Under suitable assumptions on
    the distribution of the single matrix element, we first prove that, away from
    the spectral edges, the empirical density of eigenvalues concentrates around the
    Wigner semicircle law on energy scales η ≫ N -1. This result establishes the semicircle
    law on the optimal scale and it removes a logarithmic factor from our previous
    result [6]. We then show a Wegner estimate, i.e., that the averaged density of
    states is bounded. Finally, we prove that the eigenvalues of a Wigner matrix repel
    each other, in agreement with the universality conjecture.
author:
- first_name: László
  full_name: László Erdös
  id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
  last_name: Erdös
  orcid: 0000-0001-5366-9603
- first_name: Benjamin
  full_name: Schlein, Benjamin
  last_name: Schlein
- first_name: Horng
  full_name: Yau, Horng-Tzer
  last_name: Yau
citation:
  ama: Erdös L, Schlein B, Yau H. Wegner estimate and level repulsion for Wigner random
    matrices. <i>International Mathematics Research Notices</i>. 2010;(3):436-479.
    doi:<a href="https://doi.org/10.1093/imrn/rnp136">10.1093/imrn/rnp136</a>
  apa: Erdös, L., Schlein, B., &#38; Yau, H. (2010). Wegner estimate and level repulsion
    for Wigner random matrices. <i>International Mathematics Research Notices</i>.
    Oxford University Press. <a href="https://doi.org/10.1093/imrn/rnp136">https://doi.org/10.1093/imrn/rnp136</a>
  chicago: Erdös, László, Benjamin Schlein, and Horng Yau. “Wegner Estimate and Level
    Repulsion for Wigner Random Matrices.” <i>International Mathematics Research Notices</i>.
    Oxford University Press, 2010. <a href="https://doi.org/10.1093/imrn/rnp136">https://doi.org/10.1093/imrn/rnp136</a>.
  ieee: L. Erdös, B. Schlein, and H. Yau, “Wegner estimate and level repulsion for
    Wigner random matrices,” <i>International Mathematics Research Notices</i>, no.
    3. Oxford University Press, pp. 436–479, 2010.
  ista: Erdös L, Schlein B, Yau H. 2010. Wegner estimate and level repulsion for Wigner
    random matrices. International Mathematics Research Notices. (3), 436–479.
  mla: Erdös, László, et al. “Wegner Estimate and Level Repulsion for Wigner Random
    Matrices.” <i>International Mathematics Research Notices</i>, no. 3, Oxford University
    Press, 2010, pp. 436–79, doi:<a href="https://doi.org/10.1093/imrn/rnp136">10.1093/imrn/rnp136</a>.
  short: L. Erdös, B. Schlein, H. Yau, International Mathematics Research Notices
    (2010) 436–479.
date_created: 2018-12-11T11:59:09Z
date_published: 2010-01-01T00:00:00Z
date_updated: 2021-01-12T06:59:09Z
day: '01'
doi: 10.1093/imrn/rnp136
extern: 1
issue: '3'
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/0811.2591
month: '01'
oa: 1
page: 436 - 479
publication: International Mathematics Research Notices
publication_status: published
publisher: Oxford University Press
publist_id: '4195'
quality_controlled: 0
status: public
title: Wegner estimate and level repulsion for Wigner random matrices
type: journal_article
year: '2010'
...
---
_id: '2704'
abstract:
- lang: eng
  text: Consider a system of N bosons in three dimensions interacting via a repulsive
    short range pair potential N2V(N(xi-xj)), where x = (x1, ..., xN) denotes the
    positions of the particles. Let HN, denote the Hamiltonian of the system and let
    ψN,t be the solution to the Schrödinger equation. Suppose that the initial data
    ψN,0 satisfies the energy condition 〈 ψ N,0,Hk N ψN,0〉 ≤ CkNk for k =1, 2, ....We
    also assume that the k-particle density matrices of the initial state are asymptotically
    factorized as N →∞1. We prove that the k-particle density matrices of ψN,t are
    also asymptotically factorized and the one particle orbital wave function solves
    the Gross-Pitaevskii equation, a cubic nonlinear Schrödinger equation with the
    coupling constant given by the scattering length of the potential V. We also prove
    the same conclusion if the energy condition holds only for k=1 but the factorization
    of ψN,0 is assumed in a stronger sense.
author:
- first_name: László
  full_name: László Erdös
  id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
  last_name: Erdös
  orcid: 0000-0001-5366-9603
- first_name: Benjamin
  full_name: Schlein, Benjamin
  last_name: Schlein
- first_name: Horng
  full_name: Yau, Horng-Tzer
  last_name: Yau
citation:
  ama: Erdös L, Schlein B, Yau H. Derivation of the Gross-Pitaevskii equation for
    the dynamics of Bose-Einstein condensate. <i>Annals of Mathematics</i>. 2010;172(1):291-370.
    doi:<a href="https://doi.org/10.4007/annals.2010.172.291">10.4007/annals.2010.172.291</a>
  apa: Erdös, L., Schlein, B., &#38; Yau, H. (2010). Derivation of the Gross-Pitaevskii
    equation for the dynamics of Bose-Einstein condensate. <i>Annals of Mathematics</i>.
    Princeton University Press. <a href="https://doi.org/10.4007/annals.2010.172.291">https://doi.org/10.4007/annals.2010.172.291</a>
  chicago: Erdös, László, Benjamin Schlein, and Horng Yau. “Derivation of the Gross-Pitaevskii
    Equation for the Dynamics of Bose-Einstein Condensate.” <i>Annals of Mathematics</i>.
    Princeton University Press, 2010. <a href="https://doi.org/10.4007/annals.2010.172.291">https://doi.org/10.4007/annals.2010.172.291</a>.
  ieee: L. Erdös, B. Schlein, and H. Yau, “Derivation of the Gross-Pitaevskii equation
    for the dynamics of Bose-Einstein condensate,” <i>Annals of Mathematics</i>, vol.
    172, no. 1. Princeton University Press, pp. 291–370, 2010.
  ista: Erdös L, Schlein B, Yau H. 2010. Derivation of the Gross-Pitaevskii equation
    for the dynamics of Bose-Einstein condensate. Annals of Mathematics. 172(1), 291–370.
  mla: Erdös, László, et al. “Derivation of the Gross-Pitaevskii Equation for the
    Dynamics of Bose-Einstein Condensate.” <i>Annals of Mathematics</i>, vol. 172,
    no. 1, Princeton University Press, 2010, pp. 291–370, doi:<a href="https://doi.org/10.4007/annals.2010.172.291">10.4007/annals.2010.172.291</a>.
  short: L. Erdös, B. Schlein, H. Yau, Annals of Mathematics 172 (2010) 291–370.
date_created: 2018-12-11T11:59:10Z
date_published: 2010-07-01T00:00:00Z
date_updated: 2021-01-12T06:59:10Z
day: '01'
doi: 10.4007/annals.2010.172.291
extern: 1
intvolume: '       172'
issue: '1'
main_file_link:
- open_access: '0'
  url: http://xxx.lanl.gov/abs/math-ph/0606017
month: '07'
page: 291 - 370
publication: Annals of Mathematics
publication_status: published
publisher: Princeton University Press
publist_id: '4192'
quality_controlled: 0
status: public
title: Derivation of the Gross-Pitaevskii equation for the dynamics of Bose-Einstein
  condensate
type: journal_article
volume: 172
year: '2010'
...
---
_id: '2756'
abstract:
- lang: eng
  text: We consider a large atom with nuclear charge Z described by non-relativistic
    quantum mechanics with classical or quantized electromagnetic field. We prove
    that the absolute ground state energy, allowing for minimizing over all possible
    self-generated electromagnetic fields, is given by the non-magnetic Thomas-Fermi
    theory to leading order in the simultaneous Z → ∞, α → 0 limit if Zα2 ≤ κ for
    some universal κ, where α is the fine structure constant.
author:
- first_name: László
  full_name: László Erdös
  id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
  last_name: Erdös
  orcid: 0000-0001-5366-9603
- first_name: Jan
  full_name: Solovej, Jan P
  last_name: Solovej
citation:
  ama: Erdös L, Solovej J. Ground state energy of large atoms in a self-generated
    magnetic field. <i>Communications in Mathematical Physics</i>. 2010;294(1):229-249.
    doi:<a href="https://doi.org/10.1007/s00220-009-0869-2">10.1007/s00220-009-0869-2</a>
  apa: Erdös, L., &#38; Solovej, J. (2010). Ground state energy of large atoms in
    a self-generated magnetic field. <i>Communications in Mathematical Physics</i>.
    Springer. <a href="https://doi.org/10.1007/s00220-009-0869-2">https://doi.org/10.1007/s00220-009-0869-2</a>
  chicago: Erdös, László, and Jan Solovej. “Ground State Energy of Large Atoms in
    a Self-Generated Magnetic Field.” <i>Communications in Mathematical Physics</i>.
    Springer, 2010. <a href="https://doi.org/10.1007/s00220-009-0869-2">https://doi.org/10.1007/s00220-009-0869-2</a>.
  ieee: L. Erdös and J. Solovej, “Ground state energy of large atoms in a self-generated
    magnetic field,” <i>Communications in Mathematical Physics</i>, vol. 294, no.
    1. Springer, pp. 229–249, 2010.
  ista: Erdös L, Solovej J. 2010. Ground state energy of large atoms in a self-generated
    magnetic field. Communications in Mathematical Physics. 294(1), 229–249.
  mla: Erdös, László, and Jan Solovej. “Ground State Energy of Large Atoms in a Self-Generated
    Magnetic Field.” <i>Communications in Mathematical Physics</i>, vol. 294, no.
    1, Springer, 2010, pp. 229–49, doi:<a href="https://doi.org/10.1007/s00220-009-0869-2">10.1007/s00220-009-0869-2</a>.
  short: L. Erdös, J. Solovej, Communications in Mathematical Physics 294 (2010) 229–249.
date_created: 2018-12-11T11:59:26Z
date_published: 2010-02-01T00:00:00Z
date_updated: 2021-01-12T06:59:29Z
day: '01'
doi: 10.1007/s00220-009-0869-2
extern: 1
intvolume: '       294'
issue: '1'
month: '02'
page: 229 - 249
publication: Communications in Mathematical Physics
publication_status: published
publisher: Springer
publist_id: '4136'
quality_controlled: 0
status: public
title: Ground state energy of large atoms in a self-generated magnetic field
type: journal_article
volume: 294
year: '2010'
...
---
_id: '2761'
abstract:
- lang: eng
  text: We consider N × N Hermitian random matrices with independent identically distributed
    entries (Wigner matrices). We assume that the distribution of the entries have
    a Gaussian component with variance N 3/4+β for some positive β &gt; 0. We prove
    that the local eigenvalue statistics follows the universal Dyson sine kernel.
author:
- first_name: László
  full_name: László Erdös
  id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
  last_name: Erdös
  orcid: 0000-0001-5366-9603
- first_name: José
  full_name: Ramírez, José A
  last_name: Ramírez
- first_name: Benjamin
  full_name: Schlein, Benjamin
  last_name: Schlein
- first_name: Horng
  full_name: Yau, Horng-Tzer
  last_name: Yau
citation:
  ama: Erdös L, Ramírez J, Schlein B, Yau H. Universality of sine-kernel for Wigner
    matrices with a small Gaussian perturbation. <i>Electronic Journal of Probability</i>.
    2010;15(18):526-603. doi:<a href="https://doi.org/10.1214/EJP.v15-768">10.1214/EJP.v15-768</a>
  apa: Erdös, L., Ramírez, J., Schlein, B., &#38; Yau, H. (2010). Universality of
    sine-kernel for Wigner matrices with a small Gaussian perturbation. <i>Electronic
    Journal of Probability</i>. Institute of Mathematical Statistics. <a href="https://doi.org/10.1214/EJP.v15-768">https://doi.org/10.1214/EJP.v15-768</a>
  chicago: Erdös, László, José Ramírez, Benjamin Schlein, and Horng Yau. “Universality
    of Sine-Kernel for Wigner Matrices with a Small Gaussian Perturbation.” <i>Electronic
    Journal of Probability</i>. Institute of Mathematical Statistics, 2010. <a href="https://doi.org/10.1214/EJP.v15-768">https://doi.org/10.1214/EJP.v15-768</a>.
  ieee: L. Erdös, J. Ramírez, B. Schlein, and H. Yau, “Universality of sine-kernel
    for Wigner matrices with a small Gaussian perturbation,” <i>Electronic Journal
    of Probability</i>, vol. 15, no. 18. Institute of Mathematical Statistics, pp.
    526–603, 2010.
  ista: Erdös L, Ramírez J, Schlein B, Yau H. 2010. Universality of sine-kernel for
    Wigner matrices with a small Gaussian perturbation. Electronic Journal of Probability.
    15(18), 526–603.
  mla: Erdös, László, et al. “Universality of Sine-Kernel for Wigner Matrices with
    a Small Gaussian Perturbation.” <i>Electronic Journal of Probability</i>, vol.
    15, no. 18, Institute of Mathematical Statistics, 2010, pp. 526–603, doi:<a href="https://doi.org/10.1214/EJP.v15-768">10.1214/EJP.v15-768</a>.
  short: L. Erdös, J. Ramírez, B. Schlein, H. Yau, Electronic Journal of Probability
    15 (2010) 526–603.
date_created: 2018-12-11T11:59:27Z
date_published: 2010-01-01T00:00:00Z
date_updated: 2021-01-12T06:59:31Z
day: '01'
doi: 10.1214/EJP.v15-768
extern: 1
intvolume: '        15'
issue: '18'
month: '01'
page: 526 - 603
publication: Electronic Journal of Probability
publication_status: published
publisher: Institute of Mathematical Statistics
publist_id: '4131'
quality_controlled: 0
status: public
title: Universality of sine-kernel for Wigner matrices with a small Gaussian perturbation
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
volume: 15
year: '2010'
...
---
_id: '2762'
abstract:
- lang: eng
  text: We consider N ×N Hermitian Wigner random matrices H where the probabilitydensity
    for each matrix element is given by the density v(x)=e-U(x). We prove that the
    eigenvalue statistics in the bulk are given by the Dyson sine kernel provided
    that U ∈ C 6(R{double-struck}) with at most polynomially growing derivatives and
    v(x)≤C e-c(x) for x large. The proof is based upon an approximate time reversal
    of the Dyson Brownian motion combined with the convergence of the eigenvalue density
    to the Wigner semicircle law on short scales.
author:
- first_name: László
  full_name: László Erdös
  id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
  last_name: Erdös
  orcid: 0000-0001-5366-9603
- first_name: José
  full_name: Ramírez, José A
  last_name: Ramírez
- first_name: Horng
  full_name: Yau, Horng-Tzer
  last_name: Yau
- first_name: Sandrine
  full_name: Péché, Sandrine
  last_name: Péché
- first_name: Benjamin
  full_name: Schlein, Benjamin
  last_name: Schlein
citation:
  ama: Erdös L, Ramírez J, Yau H, Péché S, Schlein B. Bulk universality for Wigner
    matrices. <i>Communications on Pure and Applied Mathematics</i>. 2010;63(7):895-925.
    doi:<a href="https://doi.org/10.1002/cpa.20317">10.1002/cpa.20317</a>
  apa: Erdös, L., Ramírez, J., Yau, H., Péché, S., &#38; Schlein, B. (2010). Bulk
    universality for Wigner matrices. <i>Communications on Pure and Applied Mathematics</i>.
    Wiley-Blackwell. <a href="https://doi.org/10.1002/cpa.20317">https://doi.org/10.1002/cpa.20317</a>
  chicago: Erdös, László, José Ramírez, Horng Yau, Sandrine Péché, and Benjamin Schlein.
    “Bulk Universality for Wigner Matrices.” <i>Communications on Pure and Applied
    Mathematics</i>. Wiley-Blackwell, 2010. <a href="https://doi.org/10.1002/cpa.20317">https://doi.org/10.1002/cpa.20317</a>.
  ieee: L. Erdös, J. Ramírez, H. Yau, S. Péché, and B. Schlein, “Bulk universality
    for Wigner matrices,” <i>Communications on Pure and Applied Mathematics</i>, vol.
    63, no. 7. Wiley-Blackwell, pp. 895–925, 2010.
  ista: Erdös L, Ramírez J, Yau H, Péché S, Schlein B. 2010. Bulk universality for
    Wigner matrices. Communications on Pure and Applied Mathematics. 63(7), 895–925.
  mla: Erdös, László, et al. “Bulk Universality for Wigner Matrices.” <i>Communications
    on Pure and Applied Mathematics</i>, vol. 63, no. 7, Wiley-Blackwell, 2010, pp.
    895–925, doi:<a href="https://doi.org/10.1002/cpa.20317">10.1002/cpa.20317</a>.
  short: L. Erdös, J. Ramírez, H. Yau, S. Péché, B. Schlein, Communications on Pure
    and Applied Mathematics 63 (2010) 895–925.
date_created: 2018-12-11T11:59:28Z
date_published: 2010-07-01T00:00:00Z
date_updated: 2021-01-12T06:59:32Z
day: '01'
doi: 10.1002/cpa.20317
extern: 1
intvolume: '        63'
issue: '7'
month: '07'
page: 895 - 925
publication: Communications on Pure and Applied Mathematics
publication_status: published
publisher: Wiley-Blackwell
publist_id: '4130'
quality_controlled: 0
status: public
title: Bulk universality for Wigner matrices
type: journal_article
volume: 63
year: '2010'
...
---
_id: '2763'
abstract:
- lang: eng
  text: In this paper, we consider the ensemble of n×n Wigner Hermitian matrices H
    = (hℓk)1≤ℓ,k≤n that generalize the Gaussian unitary ensemble (GUE). The matrix
    elements hℓk = h̄ℓk are given by hℓk = n ?1/2(xℓk + √?1yℓk), where xℓk, yℓk for
    1 ≤ ℓ &lt; k ≤ n are i.i.d. random variables with mean zero and variance 1/2,
    yℓ ℓ = 0 and xℓ ℓ have mean zero and variance 1. We assume the distribution of
    xℓk, yℓk to have subexponential decay. In [3], four of the authors recently established
    that the gap distribution and averaged k-point correlation of these matrices were
    universal (and in particular, agreed with those for GUE) assuming additional regularity
    hypotheses on the xℓk, yℓk. In [7], the other two authors, using a different method,
    established the same conclusion assuming instead some moment and support conditions
    on the xℓk, yℓk. In this short note we observe that the arguments of [3] and [7]
    can be combined to establish universality of the gap distribution and averaged
    k-point correlations for all Wigner matrices (with subexponentially decaying entries),
    with no extra assumptions.
author:
- first_name: László
  full_name: László Erdös
  id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
  last_name: Erdös
  orcid: 0000-0001-5366-9603
- first_name: José
  full_name: Ramírez, José A
  last_name: Ramírez
- first_name: Benjamin
  full_name: Schlein, Benjamin
  last_name: Schlein
- first_name: Terence
  full_name: Tao, Terence
  last_name: Tao
- first_name: Vu
  full_name: Van, Vu
  last_name: Van
- first_name: Horng
  full_name: Yau, Horng-Tzer
  last_name: Yau
citation:
  ama: Erdös L, Ramírez J, Schlein B, Tao T, Van V, Yau H. Bulk universality for Wigner
    Hermitian matrices with subexponential decay. <i>Mathematical Research Letters</i>.
    2010;17(4):667-674.
  apa: Erdös, L., Ramírez, J., Schlein, B., Tao, T., Van, V., &#38; Yau, H. (2010).
    Bulk universality for Wigner Hermitian matrices with subexponential decay. <i>Mathematical
    Research Letters</i>. International Press.
  chicago: Erdös, László, José Ramírez, Benjamin Schlein, Terence Tao, Vu Van, and
    Horng Yau. “Bulk Universality for Wigner Hermitian Matrices with Subexponential
    Decay.” <i>Mathematical Research Letters</i>. International Press, 2010.
  ieee: L. Erdös, J. Ramírez, B. Schlein, T. Tao, V. Van, and H. Yau, “Bulk universality
    for Wigner Hermitian matrices with subexponential decay,” <i>Mathematical Research
    Letters</i>, vol. 17, no. 4. International Press, pp. 667–674, 2010.
  ista: Erdös L, Ramírez J, Schlein B, Tao T, Van V, Yau H. 2010. Bulk universality
    for Wigner Hermitian matrices with subexponential decay. Mathematical Research
    Letters. 17(4), 667–674.
  mla: Erdös, László, et al. “Bulk Universality for Wigner Hermitian Matrices with
    Subexponential Decay.” <i>Mathematical Research Letters</i>, vol. 17, no. 4, International
    Press, 2010, pp. 667–74.
  short: L. Erdös, J. Ramírez, B. Schlein, T. Tao, V. Van, H. Yau, Mathematical Research
    Letters 17 (2010) 667–674.
date_created: 2018-12-11T11:59:28Z
date_published: 2010-07-01T00:00:00Z
date_updated: 2021-01-12T06:59:32Z
day: '01'
extern: 1
intvolume: '        17'
issue: '4'
month: '07'
page: 667 - 674
publication: Mathematical Research Letters
publication_status: published
publisher: International Press
publist_id: '4129'
quality_controlled: 0
status: public
title: Bulk universality for Wigner Hermitian matrices with subexponential decay
type: journal_article
volume: 17
year: '2010'
...
---
_id: '2798'
abstract:
- lang: eng
  text: Flows through pipes and channels are the most common means to transport fluids
    in practical applications and equally occur in numerous natural systems. In general,
    the transfer of fluids is energetically far more efficient if the motion is smooth
    and laminar because the friction losses are lower. However, even at moderate velocities
    pipe and channel flows are sensitive to minute disturbances, and in practice most
    flows are turbulent. Investigating the motion and spatial distribution of vortices,
    we uncovered an amplification mechanism that constantly feeds energy from the
    mean shear into turbulent eddies. At intermediate flow rates, a simple control
    mechanism suffices to intercept this energy transfer by reducing inflection points
    in the velocity profile. When activated, an immediate collapse of turbulence is
    observed, and the flow relaminarizes.
author:
- first_name: Björn
  full_name: Björn Hof
  id: 3A374330-F248-11E8-B48F-1D18A9856A87
  last_name: Hof
  orcid: 0000-0003-2057-2754
- first_name: Alberto
  full_name: de Lózar, Alberto
  last_name: De Lózar
- first_name: Marc
  full_name: Avila, Marc
  last_name: Avila
- first_name: Xiaoyun
  full_name: Xiaoyun Tu
  id: 2AFD1610-F248-11E8-B48F-1D18A9856A87
  last_name: Tu
- first_name: Tobias
  full_name: Schneider, Tobias M
  last_name: Schneider
citation:
  ama: Hof B, De Lózar A, Avila M, Tu X, Schneider T. Eliminating turbulence in spatially
    intermittent flows. <i>Science</i>. 2010;327(5972):1491-1494. doi:<a href="https://doi.org/10.1126/science.1186091">10.1126/science.1186091</a>
  apa: Hof, B., De Lózar, A., Avila, M., Tu, X., &#38; Schneider, T. (2010). Eliminating
    turbulence in spatially intermittent flows. <i>Science</i>. American Association
    for the Advancement of Science. <a href="https://doi.org/10.1126/science.1186091">https://doi.org/10.1126/science.1186091</a>
  chicago: Hof, Björn, Alberto De Lózar, Marc Avila, Xiaoyun Tu, and Tobias Schneider.
    “Eliminating Turbulence in Spatially Intermittent Flows.” <i>Science</i>. American
    Association for the Advancement of Science, 2010. <a href="https://doi.org/10.1126/science.1186091">https://doi.org/10.1126/science.1186091</a>.
  ieee: B. Hof, A. De Lózar, M. Avila, X. Tu, and T. Schneider, “Eliminating turbulence
    in spatially intermittent flows,” <i>Science</i>, vol. 327, no. 5972. American
    Association for the Advancement of Science, pp. 1491–1494, 2010.
  ista: Hof B, De Lózar A, Avila M, Tu X, Schneider T. 2010. Eliminating turbulence
    in spatially intermittent flows. Science. 327(5972), 1491–1494.
  mla: Hof, Björn, et al. “Eliminating Turbulence in Spatially Intermittent Flows.”
    <i>Science</i>, vol. 327, no. 5972, American Association for the Advancement of
    Science, 2010, pp. 1491–94, doi:<a href="https://doi.org/10.1126/science.1186091">10.1126/science.1186091</a>.
  short: B. Hof, A. De Lózar, M. Avila, X. Tu, T. Schneider, Science 327 (2010) 1491–1494.
date_created: 2018-12-11T11:59:39Z
date_published: 2010-03-19T00:00:00Z
date_updated: 2021-01-12T06:59:47Z
day: '19'
doi: 10.1126/science.1186091
extern: 1
intvolume: '       327'
issue: '5972'
month: '03'
page: 1491 - 1494
publication: Science
publication_status: published
publisher: American Association for the Advancement of Science
publist_id: '4091'
quality_controlled: 0
status: public
title: Eliminating turbulence in spatially intermittent flows
type: journal_article
volume: 327
year: '2010'
...
---
_id: '2870'
abstract:
- lang: eng
  text: Dark-grown dicotyledonous seedlings form a hook-like structure at the top
    of the hypocotyl, which is controlled by the hormones auxin and ethylene. Hook
    formation is dependent on an auxin signal gradient, whereas hook exaggeration
    is part of the triple response provoked by ethylene in dark-grown Arabidopsis
    seedlings. Several other hormones and light are also known to be involved in hook
    development, but the molecular mechanisms that lead to the initial installation
    of an auxin gradient are still poorly understood. In this study, we aimed to unravel
    the cross-talk between auxin and ethylene in the apical hook. Auxin measurements,
    the expression pattern of the auxin reporter DR5::GUS and the localization of
    auxin biosynthesis enzymes and influx carriers collectively indicate the necessity
    for auxin biosynthesis and efficient auxin translocation from the cotyledons and
    meristem into the hypocotyl in order to support proper hook development. Auxin
    accumulation in the meristem and cotyledons and in the hypocotyl is increased
    ∼2-fold upon treatment with ethylene. In addition, a strong ethylene signal leads
    to enhanced auxin biosynthesis at the inner side of the hook. Finally, mutant
    analysis demonstrates that the auxin influx carrier LAX3 is indispensable for
    proper hook formation, whereas the auxin influx carrier AUX1 is involved in the
    hook exaggeration phenotype induced by ethylene.
author:
- first_name: Filip
  full_name: Vandenbussche, Filip
  last_name: Vandenbussche
- first_name: Jan
  full_name: Petrášek, Jan
  last_name: Petrášek
- first_name: Petra
  full_name: Žádníková, Petra
  last_name: Žádníková
- first_name: Klára
  full_name: Hoyerová, Klára
  last_name: Hoyerová
- first_name: Bedřich
  full_name: Pešek, Bedřich
  last_name: Pešek
- first_name: Vered
  full_name: Raz, Vered
  last_name: Raz
- first_name: Ranjan
  full_name: Swarup, Ranjan
  last_name: Swarup
- first_name: Malcolm
  full_name: Bennett, Malcolm
  last_name: Bennett
- first_name: Eva
  full_name: Zažímalová, Eva
  last_name: Zažímalová
- first_name: Eva
  full_name: Eva Benková
  id: 38F4F166-F248-11E8-B48F-1D18A9856A87
  last_name: Benková
  orcid: 0000-0002-8510-9739
- first_name: Dominique
  full_name: Van Der Straeten, Dominique
  last_name: Van Der Straeten
citation:
  ama: Vandenbussche F, Petrášek J, Žádníková P, et al. The auxin influx carriers
    AUX1 and LAX3 are involved in auxin-ethylene interactions during apical hook development
    in Arabidopsis thaliana seedlings. <i>Development</i>. 2010;137(4):597-606. doi:<a
    href="https://doi.org/10.1242/dev.040790">10.1242/dev.040790</a>
  apa: Vandenbussche, F., Petrášek, J., Žádníková, P., Hoyerová, K., Pešek, B., Raz,
    V., … Van Der Straeten, D. (2010). The auxin influx carriers AUX1 and LAX3 are
    involved in auxin-ethylene interactions during apical hook development in Arabidopsis
    thaliana seedlings. <i>Development</i>. Company of Biologists. <a href="https://doi.org/10.1242/dev.040790">https://doi.org/10.1242/dev.040790</a>
  chicago: Vandenbussche, Filip, Jan Petrášek, Petra Žádníková, Klára Hoyerová, Bedřich
    Pešek, Vered Raz, Ranjan Swarup, et al. “The Auxin Influx Carriers AUX1 and LAX3
    Are Involved in Auxin-Ethylene Interactions during Apical Hook Development in
    Arabidopsis Thaliana Seedlings.” <i>Development</i>. Company of Biologists, 2010.
    <a href="https://doi.org/10.1242/dev.040790">https://doi.org/10.1242/dev.040790</a>.
  ieee: F. Vandenbussche <i>et al.</i>, “The auxin influx carriers AUX1 and LAX3 are
    involved in auxin-ethylene interactions during apical hook development in Arabidopsis
    thaliana seedlings,” <i>Development</i>, vol. 137, no. 4. Company of Biologists,
    pp. 597–606, 2010.
  ista: Vandenbussche F, Petrášek J, Žádníková P, Hoyerová K, Pešek B, Raz V, Swarup
    R, Bennett M, Zažímalová E, Benková E, Van Der Straeten D. 2010. The auxin influx
    carriers AUX1 and LAX3 are involved in auxin-ethylene interactions during apical
    hook development in Arabidopsis thaliana seedlings. Development. 137(4), 597–606.
  mla: Vandenbussche, Filip, et al. “The Auxin Influx Carriers AUX1 and LAX3 Are Involved
    in Auxin-Ethylene Interactions during Apical Hook Development in Arabidopsis Thaliana
    Seedlings.” <i>Development</i>, vol. 137, no. 4, Company of Biologists, 2010,
    pp. 597–606, doi:<a href="https://doi.org/10.1242/dev.040790">10.1242/dev.040790</a>.
  short: F. Vandenbussche, J. Petrášek, P. Žádníková, K. Hoyerová, B. Pešek, V. Raz,
    R. Swarup, M. Bennett, E. Zažímalová, E. Benková, D. Van Der Straeten, Development
    137 (2010) 597–606.
date_created: 2018-12-11T12:00:02Z
date_published: 2010-02-15T00:00:00Z
date_updated: 2021-01-12T07:00:23Z
day: '15'
doi: 10.1242/dev.040790
extern: 1
intvolume: '       137'
issue: '4'
month: '02'
page: 597 - 606
publication: Development
publication_status: published
publisher: Company of Biologists
publist_id: '3898'
quality_controlled: 0
status: public
title: The auxin influx carriers AUX1 and LAX3 are involved in auxin-ethylene interactions
  during apical hook development in Arabidopsis thaliana seedlings
type: journal_article
volume: 137
year: '2010'
...
---
_id: '2872'
abstract:
- lang: eng
  text: Unlike locomotive organisms capable of actively approaching essential resources,
    sessile plants must efficiently exploit their habitat for water and nutrients.
    This involves root-mediated underground interactions allowing plants to adapt
    to soils of diverse qualities. The root system of plants is a dynamic structure
    that modulates primary root growth and root branching by continuous integration
    of environmental inputs, such as nutrition availability, soil aeration, humidity,
    or salinity. Root branching is an extremely flexible means to rapidly adjust the
    overall surface of the root system and plants have evolved efficient control mechanisms,
    including, firstly initiation, when and where to start lateral root formation;
    secondly lateral root primordia organogenesis, during which the development of
    primordia can be arrested for a certain time; and thirdly lateral root emergence.
    Our review will focus on the most recent advances in understanding the molecular
    mechanisms involved in the regulation of lateral root initiation and organogenesis
    with the main focus on root system of the model plant Arabidopsis thaliana.
author:
- first_name: Eva
  full_name: Eva Benková
  id: 38F4F166-F248-11E8-B48F-1D18A9856A87
  last_name: Benková
  orcid: 0000-0002-8510-9739
- first_name: Agnieszka
  full_name: Bielach, Agnieszka
  last_name: Bielach
citation:
  ama: Benková E, Bielach A. Lateral root organogenesis - from cell to organ. <i>Current
    Opinion in Plant Biology</i>. 2010;13(6):677-683. doi:<a href="https://doi.org/10.1016/j.pbi.2010.09.006">10.1016/j.pbi.2010.09.006</a>
  apa: Benková, E., &#38; Bielach, A. (2010). Lateral root organogenesis - from cell
    to organ. <i>Current Opinion in Plant Biology</i>. Elsevier. <a href="https://doi.org/10.1016/j.pbi.2010.09.006">https://doi.org/10.1016/j.pbi.2010.09.006</a>
  chicago: Benková, Eva, and Agnieszka Bielach. “Lateral Root Organogenesis - from
    Cell to Organ.” <i>Current Opinion in Plant Biology</i>. Elsevier, 2010. <a href="https://doi.org/10.1016/j.pbi.2010.09.006">https://doi.org/10.1016/j.pbi.2010.09.006</a>.
  ieee: E. Benková and A. Bielach, “Lateral root organogenesis - from cell to organ,”
    <i>Current Opinion in Plant Biology</i>, vol. 13, no. 6. Elsevier, pp. 677–683,
    2010.
  ista: Benková E, Bielach A. 2010. Lateral root organogenesis - from cell to organ.
    Current Opinion in Plant Biology. 13(6), 677–683.
  mla: Benková, Eva, and Agnieszka Bielach. “Lateral Root Organogenesis - from Cell
    to Organ.” <i>Current Opinion in Plant Biology</i>, vol. 13, no. 6, Elsevier,
    2010, pp. 677–83, doi:<a href="https://doi.org/10.1016/j.pbi.2010.09.006">10.1016/j.pbi.2010.09.006</a>.
  short: E. Benková, A. Bielach, Current Opinion in Plant Biology 13 (2010) 677–683.
date_created: 2018-12-11T12:00:03Z
date_published: 2010-12-01T00:00:00Z
date_updated: 2021-01-12T07:00:24Z
day: '01'
doi: 10.1016/j.pbi.2010.09.006
extern: 1
intvolume: '        13'
issue: '6'
month: '12'
page: 677 - 683
publication: Current Opinion in Plant Biology
publication_status: published
publisher: Elsevier
publist_id: '3895'
quality_controlled: 0
status: public
title: Lateral root organogenesis - from cell to organ
type: journal_article
volume: 13
year: '2010'
...
---
_id: '2873'
abstract:
- lang: eng
  text: Nitrate is both a nitrogen source for higher plants and a signal molecule
    regulating their development. In Arabidopsis, the NRT1.1 nitrate transporter is
    crucial for nitrate signaling governing root growth, and has been proposed to
    act as a nitrate sensor. However, the sensing mechanism is unknown. Herein we
    show that NRT1.1 not only transports nitrate but also facilitates uptake of the
    phytohormone auxin. Moreover, nitrate inhibits NRT1.1-dependent auxin uptake,
    suggesting that transduction of nitrate signal by NRT1.1 is associated with a
    modification of auxin transport. Among other effects, auxin stimulates lateral
    root development. Mutation of NRT1.1 enhances both auxin accumulation in lateral
    roots and growth of these roots at low, but not high, nitrate concentration. Thus,
    we propose that NRT1.1 represses lateral root growth at low nitrate availability
    by promoting basipetal auxin transport out of these roots. This defines a mechanism
    connecting nutrient and hormone signaling during organ development.
author:
- first_name: Gabriel
  full_name: Krouk, Gabriel
  last_name: Krouk
- first_name: Benoît
  full_name: Lacombe, Benoît
  last_name: Lacombe
- first_name: Agnieszka
  full_name: Bielach, Agnieszka
  last_name: Bielach
- first_name: Francine
  full_name: Perrine-Walker, Francine
  last_name: Perrine Walker
- first_name: Kateřina
  full_name: Malínská, Kateřina
  last_name: Malínská
- first_name: Emmanuelle
  full_name: Mounier, Emmanuelle
  last_name: Mounier
- first_name: Klára
  full_name: Hoyerová, Klára
  last_name: Hoyerová
- first_name: Pascal
  full_name: Tillard, Pascal
  last_name: Tillard
- first_name: Sarah
  full_name: Leon, Sarah
  last_name: Leon
- first_name: Karin
  full_name: Ljung, Karin
  last_name: Ljung
- first_name: Eva
  full_name: Zažímalová, Eva
  last_name: Zažímalová
- first_name: Eva
  full_name: Eva Benková
  id: 38F4F166-F248-11E8-B48F-1D18A9856A87
  last_name: Benková
  orcid: 0000-0002-8510-9739
- first_name: Philippe
  full_name: Nacry, Philippe
  last_name: Nacry
- first_name: Alain
  full_name: Gojon, Alain
  last_name: Gojon
citation:
  ama: Krouk G, Lacombe B, Bielach A, et al. Nitrate-regulated auxin transport by
    NRT1.1 defines a mechanism for nutrient sensing in plants. <i>Developmental Cell</i>.
    2010;18(6):927-937. doi:<a href="https://doi.org/10.1016/j.devcel.2010.05.008">10.1016/j.devcel.2010.05.008</a>
  apa: Krouk, G., Lacombe, B., Bielach, A., Perrine Walker, F., Malínská, K., Mounier,
    E., … Gojon, A. (2010). Nitrate-regulated auxin transport by NRT1.1 defines a
    mechanism for nutrient sensing in plants. <i>Developmental Cell</i>. Cell Press.
    <a href="https://doi.org/10.1016/j.devcel.2010.05.008">https://doi.org/10.1016/j.devcel.2010.05.008</a>
  chicago: Krouk, Gabriel, Benoît Lacombe, Agnieszka Bielach, Francine Perrine Walker,
    Kateřina Malínská, Emmanuelle Mounier, Klára Hoyerová, et al. “Nitrate-Regulated
    Auxin Transport by NRT1.1 Defines a Mechanism for Nutrient Sensing in Plants.”
    <i>Developmental Cell</i>. Cell Press, 2010. <a href="https://doi.org/10.1016/j.devcel.2010.05.008">https://doi.org/10.1016/j.devcel.2010.05.008</a>.
  ieee: G. Krouk <i>et al.</i>, “Nitrate-regulated auxin transport by NRT1.1 defines
    a mechanism for nutrient sensing in plants,” <i>Developmental Cell</i>, vol. 18,
    no. 6. Cell Press, pp. 927–937, 2010.
  ista: Krouk G, Lacombe B, Bielach A, Perrine Walker F, Malínská K, Mounier E, Hoyerová
    K, Tillard P, Leon S, Ljung K, Zažímalová E, Benková E, Nacry P, Gojon A. 2010.
    Nitrate-regulated auxin transport by NRT1.1 defines a mechanism for nutrient sensing
    in plants. Developmental Cell. 18(6), 927–937.
  mla: Krouk, Gabriel, et al. “Nitrate-Regulated Auxin Transport by NRT1.1 Defines
    a Mechanism for Nutrient Sensing in Plants.” <i>Developmental Cell</i>, vol. 18,
    no. 6, Cell Press, 2010, pp. 927–37, doi:<a href="https://doi.org/10.1016/j.devcel.2010.05.008">10.1016/j.devcel.2010.05.008</a>.
  short: G. Krouk, B. Lacombe, A. Bielach, F. Perrine Walker, K. Malínská, E. Mounier,
    K. Hoyerová, P. Tillard, S. Leon, K. Ljung, E. Zažímalová, E. Benková, P. Nacry,
    A. Gojon, Developmental Cell 18 (2010) 927–937.
date_created: 2018-12-11T12:00:04Z
date_published: 2010-06-15T00:00:00Z
date_updated: 2021-01-12T07:00:24Z
day: '15'
doi: 10.1016/j.devcel.2010.05.008
extern: 1
intvolume: '        18'
issue: '6'
month: '06'
page: 927 - 937
publication: Developmental Cell
publication_status: published
publisher: Cell Press
publist_id: '3896'
quality_controlled: 0
status: public
title: Nitrate-regulated auxin transport by NRT1.1 defines a mechanism for nutrient
  sensing in plants
type: journal_article
volume: 18
year: '2010'
...
---
_id: '2899'
abstract:
- lang: eng
  text: Toxin–antitoxin (TA) systems are commonly found on bacterial plasmids. The
    antitoxin inhibits toxin activity unless the system is lost from the cell. Then
    the shorter lived antitoxin degrades and the cell becomes susceptible to the toxin.
    Selection for plasmid-encoded TA systems was initially thought to result from
    their reducing the number of plasmid-free cells arising during growth in monoculture.
    However, modelling and experiments have shown that this mechanism can only explain
    the success of plasmid TA systems under a restricted set of conditions. Previously,
    we have proposed and tested an alternative model explaining the success of plasmid
    TA systems as a consequence of competition occurring between plasmids during co-infection
    of bacterial hosts. Here, we test a further prediction of this model, that competition
    between plasmids will lead to the biased accumulation of TA systems on plasmids
    relative to chromosomes. Transposon-encoded TA systems were added to populations
    of plasmid-containing cells, such that TA systems could insert into either plasmids
    or chromosomes. These populations were enriched for transposon-containing cells
    and then incubated in environments that did, or did not, allow effective within-host
    plasmid competition to occur. Changes in the ratio of plasmid- to chromosome-encoded
    TA systems were monitored. In agreement with our model, we found that plasmid-encoded
    TA systems had a competitive advantage, but only when host cells were sensitive
    to the effect of TA systems. This result demonstrates that within-host competition
    between plasmids can select for TA systems.
author:
- first_name: Tim
  full_name: Cooper, Tim F
  last_name: Cooper
- first_name: Tiago
  full_name: Tiago Paixao
  id: 2C5658E6-F248-11E8-B48F-1D18A9856A87
  last_name: Paixao
  orcid: 0000-0003-2361-3953
- first_name: Jack
  full_name: Heinemann, Jack A
  last_name: Heinemann
citation:
  ama: Cooper T, Paixao T, Heinemann J. Within host competition selects for plasmid
    encoded toxin–antitoxin systems. <i>Proc R Soc B</i>. 2010;277(1697):3149-3155.
    doi:<a href="https://doi.org/10.1098/rspb.2010.0831">10.1098/rspb.2010.0831</a>
  apa: Cooper, T., Paixao, T., &#38; Heinemann, J. (2010). Within host competition
    selects for plasmid encoded toxin–antitoxin systems. <i>Proc R Soc B</i>. Wiley-Blackwell.
    <a href="https://doi.org/10.1098/rspb.2010.0831">https://doi.org/10.1098/rspb.2010.0831</a>
  chicago: Cooper, Tim, Tiago Paixao, and Jack Heinemann. “Within Host Competition
    Selects for Plasmid Encoded Toxin–Antitoxin Systems.” <i>Proc R Soc B</i>. Wiley-Blackwell,
    2010. <a href="https://doi.org/10.1098/rspb.2010.0831">https://doi.org/10.1098/rspb.2010.0831</a>.
  ieee: T. Cooper, T. Paixao, and J. Heinemann, “Within host competition selects for
    plasmid encoded toxin–antitoxin systems,” <i>Proc R Soc B</i>, vol. 277, no. 1697.
    Wiley-Blackwell, pp. 3149–3155, 2010.
  ista: Cooper T, Paixao T, Heinemann J. 2010. Within host competition selects for
    plasmid encoded toxin–antitoxin systems. Proc R Soc B. 277(1697), 3149–3155.
  mla: Cooper, Tim, et al. “Within Host Competition Selects for Plasmid Encoded Toxin–Antitoxin
    Systems.” <i>Proc R Soc B</i>, vol. 277, no. 1697, Wiley-Blackwell, 2010, pp.
    3149–55, doi:<a href="https://doi.org/10.1098/rspb.2010.0831">10.1098/rspb.2010.0831</a>.
  short: T. Cooper, T. Paixao, J. Heinemann, Proc R Soc B 277 (2010) 3149–3155.
date_created: 2018-12-11T12:00:14Z
date_published: 2010-10-10T00:00:00Z
date_updated: 2021-01-12T07:00:33Z
day: '10'
doi: 10.1098/rspb.2010.0831
extern: 1
intvolume: '       277'
issue: '1697'
month: '10'
page: 3149 - 3155
publication: Proc R Soc B
publication_status: published
publisher: Wiley-Blackwell
publist_id: '3859'
quality_controlled: 0
status: public
title: Within host competition selects for plasmid encoded toxin–antitoxin systems
type: journal_article
volume: 277
year: '2010'
...
