[{"author":[{"full_name":"Angelini, Thomas","first_name":"Thomas","last_name":"Angelini"},{"first_name":"Edouard B","full_name":"Hannezo, Edouard B","last_name":"Hannezo","id":"3A9DB764-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-6005-1561"},{"last_name":"Trepat","first_name":"Xavier","full_name":"Trepat, Xavier"},{"first_name":"Jeffrey","full_name":"Fredberg, Jeffrey","last_name":"Fredberg"},{"full_name":"Weitz, David","first_name":"David","last_name":"Weitz"}],"issue":"16","publist_id":"6523","publication":"Physical Review Letters","acknowledgement":"This work was supported by the NSF (DMR-0602684) and the Harvard MRSEC (DMR-0820484).\r\nWe would like to thank Dr. James Butler for helpful conversations.","date_published":"2010-04-23T00:00:00Z","oa_version":"None","type":"journal_article","publication_status":"published","language":[{"iso":"eng"}],"title":"Cell migration driven by cooperative substrate deformation patterns","publisher":"American Physical Society","_id":"920","doi":"10.1103/PhysRevLett.104.168104","month":"04","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","intvolume":"       104","citation":{"ama":"Angelini T, Hannezo EB, Trepat X, Fredberg J, Weitz D. Cell migration driven by cooperative substrate deformation patterns. <i>Physical Review Letters</i>. 2010;104(16). doi:<a href=\"https://doi.org/10.1103/PhysRevLett.104.168104\">10.1103/PhysRevLett.104.168104</a>","short":"T. Angelini, E.B. Hannezo, X. Trepat, J. Fredberg, D. Weitz, Physical Review Letters 104 (2010).","mla":"Angelini, Thomas, et al. “Cell Migration Driven by Cooperative Substrate Deformation Patterns.” <i>Physical Review Letters</i>, vol. 104, no. 16, American Physical Society, 2010, doi:<a href=\"https://doi.org/10.1103/PhysRevLett.104.168104\">10.1103/PhysRevLett.104.168104</a>.","ieee":"T. Angelini, E. B. Hannezo, X. Trepat, J. Fredberg, and D. Weitz, “Cell migration driven by cooperative substrate deformation patterns,” <i>Physical Review Letters</i>, vol. 104, no. 16. American Physical Society, 2010.","ista":"Angelini T, Hannezo EB, Trepat X, Fredberg J, Weitz D. 2010. Cell migration driven by cooperative substrate deformation patterns. Physical Review Letters. 104(16).","apa":"Angelini, T., Hannezo, E. B., Trepat, X., Fredberg, J., &#38; Weitz, D. (2010). Cell migration driven by cooperative substrate deformation patterns. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevLett.104.168104\">https://doi.org/10.1103/PhysRevLett.104.168104</a>","chicago":"Angelini, Thomas, Edouard B Hannezo, Xavier Trepat, Jeffrey Fredberg, and David Weitz. “Cell Migration Driven by Cooperative Substrate Deformation Patterns.” <i>Physical Review Letters</i>. American Physical Society, 2010. <a href=\"https://doi.org/10.1103/PhysRevLett.104.168104\">https://doi.org/10.1103/PhysRevLett.104.168104</a>."},"article_processing_charge":"No","day":"23","extern":"1","abstract":[{"text":"Most eukaryotic cells sense and respond to the mechanical properties of their surroundings. This can strongly influence their collective behavior in embryonic development, tissue function, and wound healing. We use a deformable substrate to measure collective behavior in cell motion due to substrate mediated cell-cell interactions. We quantify spatial and temporal correlations in migration velocity and substrate deformation, and show that cooperative cell-driven patterns of substrate deformation mediate long-distance mechanical coupling between cells and control collective cell migration.","lang":"eng"}],"volume":104,"status":"public","date_updated":"2021-01-12T08:21:55Z","date_created":"2018-12-11T11:49:12Z","year":"2010"},{"article_type":"original","publication_status":"published","title":"Tin telluride: A weakly co-elastic metal","oa":1,"month":"11","_id":"7078","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","extern":"1","abstract":[{"lang":"eng","text":"We report resonant ultrasound spectroscopy (RUS), dilatometry/magnetostriction, magnetotransport, magnetization, specific-heat, and 119Sn Mössbauer spectroscopy measurements on SnTe and Sn0.995Cr0.005Te. Hall measurements at T=77 K indicate that our Bridgman-grown single crystals have a p-type carrier concentration of 3.4×1019 cm−3 and that our Cr-doped crystals have an n-type concentration of 5.8×1022 cm−3. Although our SnTe crystals are diamagnetic over the temperature range 2≤T≤1100 K, the Cr-doped crystals are room-temperature ferromagnets with a Curie temperature of 294 K. For each sample type, three-terminal capacitive dilatometry measurements detect a subtle 0.5 μm distortion at Tc≈85 K. Whereas our RUS measurements on SnTe show elastic hardening near the structural transition, pointing to co-elastic behavior, similar measurements on Sn0.995Cr0.005Te show a pronounced softening, pointing to ferroelastic behavior. Effective Debye temperature, θD, values of SnTe obtained from 119Sn Mössbauer studies show a hardening of phonons in the range 60–115 K (θD=162 K) as compared with the 100–300 K range (θD=150 K). In addition, a precursor softening extending over approximately 100 K anticipates this collapse at the critical temperature and quantitative analysis over three decades of its reduced modulus finds ΔC44/C44=A|(T−T0)/T0|−κ with κ=0.50±0.02, a value indicating a three-dimensional softening of phonon branches at a temperature T0∼75 K, considerably below Tc. We suggest that the differences in these two types of elastic behaviors lie in the absence of elastic domain-wall motion in the one case and their nucleation in the other."}],"status":"public","article_number":"184112","intvolume":"        82","citation":{"mla":"Salje, E. K. H., et al. “Tin Telluride: A Weakly Co-Elastic Metal.” <i>Physical Review B</i>, vol. 82, no. 18, 184112, APS, 2010, doi:<a href=\"https://doi.org/10.1103/physrevb.82.184112\">10.1103/physrevb.82.184112</a>.","ieee":"E. K. H. Salje <i>et al.</i>, “Tin telluride: A weakly co-elastic metal,” <i>Physical Review B</i>, vol. 82, no. 18. APS, 2010.","chicago":"Salje, E. K. H., D. J. Safarik, Kimberly A Modic, J. E. Gubernatis, J. C. Cooley, R. D. Taylor, B. Mihaila, et al. “Tin Telluride: A Weakly Co-Elastic Metal.” <i>Physical Review B</i>. APS, 2010. <a href=\"https://doi.org/10.1103/physrevb.82.184112\">https://doi.org/10.1103/physrevb.82.184112</a>.","ista":"Salje EKH, Safarik DJ, Modic KA, Gubernatis JE, Cooley JC, Taylor RD, Mihaila B, Saxena A, Lookman T, Smith JL, Fisher RA, Pasternak M, Opeil CP, Siegrist T, Littlewood PB, Lashley JC. 2010. Tin telluride: A weakly co-elastic metal. Physical Review B. 82(18), 184112.","apa":"Salje, E. K. H., Safarik, D. J., Modic, K. A., Gubernatis, J. E., Cooley, J. C., Taylor, R. D., … Lashley, J. C. (2010). Tin telluride: A weakly co-elastic metal. <i>Physical Review B</i>. APS. <a href=\"https://doi.org/10.1103/physrevb.82.184112\">https://doi.org/10.1103/physrevb.82.184112</a>","ama":"Salje EKH, Safarik DJ, Modic KA, et al. Tin telluride: A weakly co-elastic metal. <i>Physical Review B</i>. 2010;82(18). doi:<a href=\"https://doi.org/10.1103/physrevb.82.184112\">10.1103/physrevb.82.184112</a>","short":"E.K.H. Salje, D.J. Safarik, K.A. Modic, J.E. Gubernatis, J.C. Cooley, R.D. Taylor, B. Mihaila, A. Saxena, T. Lookman, J.L. Smith, R.A. Fisher, M. Pasternak, C.P. Opeil, T. Siegrist, P.B. Littlewood, J.C. Lashley, Physical Review B 82 (2010)."},"day":"18","type":"journal_article","arxiv":1,"language":[{"iso":"eng"}],"publisher":"APS","doi":"10.1103/physrevb.82.184112","author":[{"first_name":"E. K. H.","full_name":"Salje, E. K. H.","last_name":"Salje"},{"full_name":"Safarik, D. J.","first_name":"D. J.","last_name":"Safarik"},{"full_name":"Modic, Kimberly A","first_name":"Kimberly A","last_name":"Modic","id":"13C26AC0-EB69-11E9-87C6-5F3BE6697425","orcid":"0000-0001-9760-3147"},{"last_name":"Gubernatis","first_name":"J. E.","full_name":"Gubernatis, J. E."},{"first_name":"J. C.","full_name":"Cooley, J. C.","last_name":"Cooley"},{"full_name":"Taylor, R. D.","first_name":"R. D.","last_name":"Taylor"},{"first_name":"B.","full_name":"Mihaila, B.","last_name":"Mihaila"},{"full_name":"Saxena, A.","first_name":"A.","last_name":"Saxena"},{"last_name":"Lookman","full_name":"Lookman, T.","first_name":"T."},{"first_name":"J. L.","full_name":"Smith, J. L.","last_name":"Smith"},{"full_name":"Fisher, R. A.","first_name":"R. A.","last_name":"Fisher"},{"last_name":"Pasternak","first_name":"M.","full_name":"Pasternak, M."},{"first_name":"C. P.","full_name":"Opeil, C. P.","last_name":"Opeil"},{"last_name":"Siegrist","full_name":"Siegrist, T.","first_name":"T."},{"last_name":"Littlewood","first_name":"P. B.","full_name":"Littlewood, P. B."},{"last_name":"Lashley","first_name":"J. C.","full_name":"Lashley, J. C."}],"issue":"18","publication":"Physical Review B","date_published":"2010-11-18T00:00:00Z","external_id":{"arxiv":["1011.1445"]},"oa_version":"Preprint","volume":82,"date_updated":"2021-01-12T08:11:44Z","year":"2010","date_created":"2019-11-19T13:46:28Z","quality_controlled":"1","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1011.1445"}],"publication_identifier":{"issn":["1098-0121","1550-235X"]},"article_processing_charge":"No"},{"quality_controlled":"1","year":"2010","date_created":"2019-11-19T13:47:24Z","date_updated":"2021-01-12T08:11:44Z","article_number":"033519","status":"public","volume":107,"abstract":[{"lang":"eng","text":"We have observed that reacting Pb:Te:Ag:Se in a 1:1:1.9:1 molar ratio gives rise to what appears to be a predominantly single-phase alloy, which crystallizes in the PbSe cF8 fcc structure. However, further investigation of the structure using energy dispersive x-ray analysis reveals the presence of two phases, PbSe and β-Ag2Te, with identical lattice parameters. The total thermal conductivity of the formed alloy is remarkably low for a crystalline material, κT<0.6W∕mK at 675K, it is reproducible, and in addition, the compound has good mechanical properties."}],"extern":"1","day":"09","article_processing_charge":"No","publication_identifier":{"issn":["0021-8979","1089-7550"]},"citation":{"mla":"Drymiotis, Fivos R., et al. “Structure Formation and Very Low Thermal Conductivity in Pb:Te:Ag:Se Mixtures.” <i>Journal of Applied Physics</i>, vol. 107, no. 3, 033519, AIP, 2010, doi:<a href=\"https://doi.org/10.1063/1.3284946\">10.1063/1.3284946</a>.","ieee":"F. R. Drymiotis <i>et al.</i>, “Structure formation and very low thermal conductivity in Pb:Te:Ag:Se mixtures,” <i>Journal of Applied Physics</i>, vol. 107, no. 3. AIP, 2010.","ista":"Drymiotis FR, Drye TB, Wang Y, He J, Rhodes D, Modic KA, Cawthorne S, Zhang QR. 2010. Structure formation and very low thermal conductivity in Pb:Te:Ag:Se mixtures. Journal of Applied Physics. 107(3), 033519.","chicago":"Drymiotis, Fivos R., Tyler B. Drye, Yisha Wang, Jian He, Daniel Rhodes, Kimberly A Modic, Samantha Cawthorne, and Qiu Run Zhang. “Structure Formation and Very Low Thermal Conductivity in Pb:Te:Ag:Se Mixtures.” <i>Journal of Applied Physics</i>. AIP, 2010. <a href=\"https://doi.org/10.1063/1.3284946\">https://doi.org/10.1063/1.3284946</a>.","apa":"Drymiotis, F. R., Drye, T. B., Wang, Y., He, J., Rhodes, D., Modic, K. A., … Zhang, Q. R. (2010). Structure formation and very low thermal conductivity in Pb:Te:Ag:Se mixtures. <i>Journal of Applied Physics</i>. AIP. <a href=\"https://doi.org/10.1063/1.3284946\">https://doi.org/10.1063/1.3284946</a>","ama":"Drymiotis FR, Drye TB, Wang Y, et al. Structure formation and very low thermal conductivity in Pb:Te:Ag:Se mixtures. <i>Journal of Applied Physics</i>. 2010;107(3). doi:<a href=\"https://doi.org/10.1063/1.3284946\">10.1063/1.3284946</a>","short":"F.R. Drymiotis, T.B. Drye, Y. Wang, J. He, D. Rhodes, K.A. Modic, S. Cawthorne, Q.R. Zhang, Journal of Applied Physics 107 (2010)."},"intvolume":"       107","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"7079","month":"02","doi":"10.1063/1.3284946","publisher":"AIP","title":"Structure formation and very low thermal conductivity in Pb:Te:Ag:Se mixtures","publication_status":"published","language":[{"iso":"eng"}],"article_type":"original","type":"journal_article","oa_version":"None","date_published":"2010-02-09T00:00:00Z","publication":"Journal of Applied Physics","issue":"3","author":[{"last_name":"Drymiotis","full_name":"Drymiotis, Fivos R.","first_name":"Fivos R."},{"last_name":"Drye","first_name":"Tyler B.","full_name":"Drye, Tyler B."},{"full_name":"Wang, Yisha","first_name":"Yisha","last_name":"Wang"},{"last_name":"He","first_name":"Jian","full_name":"He, Jian"},{"last_name":"Rhodes","full_name":"Rhodes, Daniel","first_name":"Daniel"},{"last_name":"Modic","first_name":"Kimberly A","full_name":"Modic, Kimberly A","id":"13C26AC0-EB69-11E9-87C6-5F3BE6697425","orcid":"0000-0001-9760-3147"},{"last_name":"Cawthorne","full_name":"Cawthorne, Samantha","first_name":"Samantha"},{"full_name":"Zhang, Qiu Run","first_name":"Qiu Run","last_name":"Zhang"}]},{"publication_identifier":{"issn":["1099-0062"]},"citation":{"mla":"Giordani, V., et al. “H2O2 Decomposition Reaction as Selecting Tool for Catalysts in Li–O2 Cells.” <i>Electrochemical and Solid-State Letters</i>, vol. 13, no. 12, A180, The Electrochemical Society, 2010, doi:<a href=\"https://doi.org/10.1149/1.3494045\">10.1149/1.3494045</a>.","ieee":"V. Giordani, S. A. Freunberger, P. G. Bruce, J.-M. Tarascon, and D. Larcher, “H2O2 decomposition reaction as selecting tool for catalysts in Li–O2 cells,” <i>Electrochemical and Solid-State Letters</i>, vol. 13, no. 12. The Electrochemical Society, 2010.","ista":"Giordani V, Freunberger SA, Bruce PG, Tarascon J-M, Larcher D. 2010. H2O2 decomposition reaction as selecting tool for catalysts in Li–O2 cells. Electrochemical and Solid-State Letters. 13(12), A180.","chicago":"Giordani, V., Stefan Alexander Freunberger, P. G. Bruce, J.-M. Tarascon, and D. Larcher. “H2O2 Decomposition Reaction as Selecting Tool for Catalysts in Li–O2 Cells.” <i>Electrochemical and Solid-State Letters</i>. The Electrochemical Society, 2010. <a href=\"https://doi.org/10.1149/1.3494045\">https://doi.org/10.1149/1.3494045</a>.","apa":"Giordani, V., Freunberger, S. A., Bruce, P. G., Tarascon, J.-M., &#38; Larcher, D. (2010). H2O2 decomposition reaction as selecting tool for catalysts in Li–O2 cells. <i>Electrochemical and Solid-State Letters</i>. The Electrochemical Society. <a href=\"https://doi.org/10.1149/1.3494045\">https://doi.org/10.1149/1.3494045</a>","ama":"Giordani V, Freunberger SA, Bruce PG, Tarascon J-M, Larcher D. H2O2 decomposition reaction as selecting tool for catalysts in Li–O2 cells. <i>Electrochemical and Solid-State Letters</i>. 2010;13(12). doi:<a href=\"https://doi.org/10.1149/1.3494045\">10.1149/1.3494045</a>","short":"V. Giordani, S.A. Freunberger, P.G. Bruce, J.-M. Tarascon, D. Larcher, Electrochemical and Solid-State Letters 13 (2010)."},"intvolume":"        13","day":"04","article_processing_charge":"No","article_number":"A180","status":"public","volume":13,"abstract":[{"text":"The decomposition reaction of H2O2 aqueous solutions (H2O2 - H2O + 1/2O2) catalyzed by transition metal oxide powders has been compared with the charging voltage of nonaqueous Li-O2 cells containing the same catalyst. An inverse linear relationship between Ln k (rate constant for the H2O2 decomposition) and the charging voltage has been found, despite differences in media and possible mechanistic differences. The results suggest that the decomposition may be a reliable, useful, and fast screening tool for materials that promote the charging process of the Li-O2 battery and may ultimately give insight into the charging mechanism.","lang":"eng"}],"extern":"1","quality_controlled":"1","date_created":"2020-01-15T12:21:06Z","year":"2010","date_updated":"2021-01-12T08:13:01Z","publication":"Electrochemical and Solid-State Letters","issue":"12","author":[{"last_name":"Giordani","first_name":"V.","full_name":"Giordani, V."},{"id":"A8CA28E6-CE23-11E9-AD2D-EC27E6697425","orcid":"0000-0003-2902-5319","full_name":"Freunberger, Stefan Alexander","first_name":"Stefan Alexander","last_name":"Freunberger"},{"full_name":"Bruce, P. G.","first_name":"P. G.","last_name":"Bruce"},{"last_name":"Tarascon","first_name":"J.-M.","full_name":"Tarascon, J.-M."},{"last_name":"Larcher","full_name":"Larcher, D.","first_name":"D."}],"oa_version":"None","date_published":"2010-10-04T00:00:00Z","title":"H2O2 decomposition reaction as selecting tool for catalysts in Li–O2 cells","language":[{"iso":"eng"}],"publication_status":"published","article_type":"letter_note","type":"journal_article","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"7318","doi":"10.1149/1.3494045","month":"10","publisher":"The Electrochemical Society"},{"extern":"1","volume":"6343 LNCS","abstract":[{"lang":"eng","text":"Most people believe that renaming is easy: simply choose a name at random; if more than one process selects the same name, then try again. We highlight the issues that occur when trying to implement such a scheme and shed new light on the read-write complexity of randomized renaming in an asynchronous environment. At the heart of our new perspective stands an adaptive implementation of a randomized test-and-set object, that has poly-logarithmic step complexity per operation, with high probability. Interestingly, our implementation is anonymous, as it does not require process identifiers. Based on this implementation, we present two new randomized renaming algorithms. The first ensures a tight namespace of n names using O( n log4 n) total steps, with high probability. This significantly improves on the complexity of the best previously known namespace-optimal algorithms. The second algorithm achieves a namespace of size k (1 + ε) using O( k log4 k / log2 (1 + ε) ) total steps, both with high probability, where k is the total contention in the execution. It is the first adaptive randomized renaming algorithm, and it improves on existing deterministic solutions by providing a smaller namespace, and by lowering step complexity."}],"status":"public","date_updated":"2023-02-23T13:10:21Z","year":"2010","date_created":"2018-12-11T11:48:19Z","page":"94 - 108","citation":{"ama":"Alistarh D-A, Attiya H, Gilbert S, Giurgiu A, Guerraoui R. Fast randomized test-and-set and renaming. In: Vol 6343 LNCS. Springer; 2010:94-108. doi:<a href=\"https://doi.org/10.1007/978-3-642-15763-9_9\">10.1007/978-3-642-15763-9_9</a>","short":"D.-A. Alistarh, H. Attiya, S. Gilbert, A. Giurgiu, R. Guerraoui, in:, Springer, 2010, pp. 94–108.","ieee":"D.-A. Alistarh, H. Attiya, S. Gilbert, A. Giurgiu, and R. Guerraoui, “Fast randomized test-and-set and renaming,” presented at the DISC: Distributed Computing, 2010, vol. 6343 LNCS, pp. 94–108.","mla":"Alistarh, Dan-Adrian, et al. <i>Fast Randomized Test-and-Set and Renaming</i>. Vol. 6343 LNCS, Springer, 2010, pp. 94–108, doi:<a href=\"https://doi.org/10.1007/978-3-642-15763-9_9\">10.1007/978-3-642-15763-9_9</a>.","chicago":"Alistarh, Dan-Adrian, Hagit Attiya, Seth Gilbert, Andrei Giurgiu, and Rachid Guerraoui. “Fast Randomized Test-and-Set and Renaming,” 6343 LNCS:94–108. Springer, 2010. <a href=\"https://doi.org/10.1007/978-3-642-15763-9_9\">https://doi.org/10.1007/978-3-642-15763-9_9</a>.","apa":"Alistarh, D.-A., Attiya, H., Gilbert, S., Giurgiu, A., &#38; Guerraoui, R. (2010). Fast randomized test-and-set and renaming (Vol. 6343 LNCS, pp. 94–108). Presented at the DISC: Distributed Computing, Springer. <a href=\"https://doi.org/10.1007/978-3-642-15763-9_9\">https://doi.org/10.1007/978-3-642-15763-9_9</a>","ista":"Alistarh D-A, Attiya H, Gilbert S, Giurgiu A, Guerraoui R. 2010. Fast randomized test-and-set and renaming. DISC: Distributed Computing, LNCS, vol. 6343 LNCS, 94–108."},"article_processing_charge":"No","day":"01","type":"conference","language":[{"iso":"eng"}],"publication_status":"published","title":"Fast randomized test-and-set and renaming","publisher":"Springer","_id":"754","doi":"10.1007/978-3-642-15763-9_9","month":"01","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"full_name":"Alistarh, Dan-Adrian","first_name":"Dan-Adrian","last_name":"Alistarh","id":"4A899BFC-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-3650-940X"},{"last_name":"Attiya","full_name":"Attiya, Hagit","first_name":"Hagit"},{"last_name":"Gilbert","full_name":"Gilbert, Seth","first_name":"Seth"},{"last_name":"Giurgiu","first_name":"Andrei","full_name":"Giurgiu, Andrei"},{"full_name":"Guerraoui, Rachid","first_name":"Rachid","last_name":"Guerraoui"}],"publist_id":"6900","alternative_title":["LNCS"],"acknowledgement":"The work of Dan Alistarh is supported by the Swiss NCCR MICS project. The work of Hagit Attiya is supported in part by the Israel Science Foundation (grant number 953/06).","date_published":"2010-01-01T00:00:00Z","oa_version":"None","conference":{"name":"DISC: Distributed Computing"}},{"publisher":"Springer","_id":"755","doi":"10.1007/978-3-642-14162-1_10","month":"01","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","type":"conference","language":[{"iso":"eng"}],"publication_status":"published","title":"How efficient can gossip be? (On the cost of resilient information exchange)","acknowledgement":"We would like to thank Prof. Hagit Attiya and the anonymous reviewers for their useful comments on earlier drafts of this paper.","date_published":"2010-01-01T00:00:00Z","conference":{"name":"ICALP: International Colloquium on Automota, Languages and Programming"},"oa_version":"None","author":[{"full_name":"Alistarh, Dan-Adrian","first_name":"Dan-Adrian","last_name":"Alistarh","id":"4A899BFC-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-3650-940X"},{"first_name":"Seth","full_name":"Gilbert, Seth","last_name":"Gilbert"},{"full_name":"Guerraoui, Rachid","first_name":"Rachid","last_name":"Guerraoui"},{"last_name":"Zadimoghaddam","full_name":"Zadimoghaddam, Morteza","first_name":"Morteza"}],"publist_id":"6901","alternative_title":["LNCS"],"issue":"PART 2","date_updated":"2023-02-23T13:10:40Z","date_created":"2018-12-11T11:48:20Z","year":"2010","page":"115 - 126","extern":"1","volume":"6199 LNCS","abstract":[{"lang":"eng","text":"Gossip, also known as epidemic dissemination, is becoming an increasingly popular technique in distributed systems. Yet, it has remained a partially open question: how robust are such protocols? We consider a natural extension of the random phone-call model (introduced by Karp et al. [1]), and we analyze two different notions of robustness: the ability to tolerate adaptive failures, and the ability to tolerate oblivious failures. For adaptive failures, we present a new gossip protocol, TrickleGossip, which achieves near-optimal O(n log 3 n) message complexity. To the best of our knowledge, this is the first epidemic-style protocol that can tolerate adaptive failures. We also show a direct relation between resilience and message complexity, demonstrating that gossip protocols which tolerate a large number of adaptive failures need to use a super-linear number of messages with high probability. For oblivious failures, we present a new gossip protocol, CoordinatedGossip, that achieves optimal O(n) message complexity. This protocol makes novel use of the universe reduction technique to limit the message complexity."}],"status":"public","article_processing_charge":"No","day":"01","citation":{"chicago":"Alistarh, Dan-Adrian, Seth Gilbert, Rachid Guerraoui, and Morteza Zadimoghaddam. “How Efficient Can Gossip Be? (On the Cost of Resilient Information Exchange),” 6199 LNCS:115–26. Springer, 2010. <a href=\"https://doi.org/10.1007/978-3-642-14162-1_10\">https://doi.org/10.1007/978-3-642-14162-1_10</a>.","apa":"Alistarh, D.-A., Gilbert, S., Guerraoui, R., &#38; Zadimoghaddam, M. (2010). How efficient can gossip be? (On the cost of resilient information exchange) (Vol. 6199 LNCS, pp. 115–126). Presented at the ICALP: International Colloquium on Automota, Languages and Programming, Springer. <a href=\"https://doi.org/10.1007/978-3-642-14162-1_10\">https://doi.org/10.1007/978-3-642-14162-1_10</a>","ista":"Alistarh D-A, Gilbert S, Guerraoui R, Zadimoghaddam M. 2010. How efficient can gossip be? (On the cost of resilient information exchange). ICALP: International Colloquium on Automota, Languages and Programming, LNCS, vol. 6199 LNCS, 115–126.","ieee":"D.-A. Alistarh, S. Gilbert, R. Guerraoui, and M. Zadimoghaddam, “How efficient can gossip be? (On the cost of resilient information exchange),” presented at the ICALP: International Colloquium on Automota, Languages and Programming, 2010, vol. 6199 LNCS, no. PART 2, pp. 115–126.","mla":"Alistarh, Dan-Adrian, et al. <i>How Efficient Can Gossip Be? (On the Cost of Resilient Information Exchange)</i>. Vol. 6199 LNCS, no. PART 2, Springer, 2010, pp. 115–26, doi:<a href=\"https://doi.org/10.1007/978-3-642-14162-1_10\">10.1007/978-3-642-14162-1_10</a>.","short":"D.-A. Alistarh, S. Gilbert, R. Guerraoui, M. Zadimoghaddam, in:, Springer, 2010, pp. 115–126.","ama":"Alistarh D-A, Gilbert S, Guerraoui R, Zadimoghaddam M. How efficient can gossip be? (On the cost of resilient information exchange). In: Vol 6199 LNCS. Springer; 2010:115-126. doi:<a href=\"https://doi.org/10.1007/978-3-642-14162-1_10\">10.1007/978-3-642-14162-1_10</a>"}},{"type":"conference","title":"Securing every bit: Authenticated broadcast in radio networks","language":[{"iso":"eng"}],"publication_status":"published","publisher":"ACM","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","doi":"10.1145/1810479.1810489","_id":"756","month":"01","author":[{"full_name":"Alistarh, Dan-Adrian","first_name":"Dan-Adrian","last_name":"Alistarh","id":"4A899BFC-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-3650-940X"},{"first_name":"Seth","full_name":"Gilbert, Seth","last_name":"Gilbert"},{"last_name":"Guerraoui","full_name":"Guerraoui, Rachid","first_name":"Rachid"},{"first_name":"Žarko","full_name":"Milošević, Žarko","last_name":"Milošević"},{"last_name":"Newport","full_name":"Newport, Calvin","first_name":"Calvin"}],"publist_id":"6902","date_published":"2010-01-01T00:00:00Z","acknowledgement":"The authors would like to thank Prof. Guevara Noubir for his useful comments on earlier\r\ndrafts of this paper.","conference":{"name":"SPAA: Symposium on Parallelism in Algorithms and Architectures"},"oa_version":"None","abstract":[{"text":"This paper studies non-cryptographic authenticated broadcast in radio networks subject to malicious failures. We introduce two protocols that address this problem. The first, NeighborWatchRB, makes use of a novel strategy in which honest devices monitor their neighbors for malicious behavior. Second, we present a more robust variant, MultiPathRB, that tolerates the maximum possible density of malicious devices per region, using an elaborate voting strategy. We also introduce a new proof technique to show that both protocols ensure asymptotically optimal running time. We demonstrate the fault tolerance of our protocols through extensive simulation. Simulations show the practical superiority of the NeighborWatchRB protocol (an advantage hidden in the constants of the asymptotic complexity). The NeighborWatchRB protocol even performs relatively well when compared to the simple, fast epidemic protocols commonly used in the radio setting, protocols that tolerate no malicious faults. We therefore believe that the overhead for ensuring authenticated broadcast is reasonable, especially in applications that use authenticated broadcast only when necessary, such as distributing an authenticated digest.","lang":"eng"}],"extern":"1","status":"public","date_updated":"2023-02-23T13:10:56Z","page":"50 - 59","year":"2010","date_created":"2018-12-11T11:48:20Z","citation":{"ama":"Alistarh D-A, Gilbert S, Guerraoui R, Milošević Ž, Newport C. Securing every bit: Authenticated broadcast in radio networks. In: ACM; 2010:50-59. doi:<a href=\"https://doi.org/10.1145/1810479.1810489\">10.1145/1810479.1810489</a>","short":"D.-A. Alistarh, S. Gilbert, R. Guerraoui, Ž. Milošević, C. Newport, in:, ACM, 2010, pp. 50–59.","ieee":"D.-A. Alistarh, S. Gilbert, R. Guerraoui, Ž. Milošević, and C. Newport, “Securing every bit: Authenticated broadcast in radio networks,” presented at the SPAA: Symposium on Parallelism in Algorithms and Architectures, 2010, pp. 50–59.","mla":"Alistarh, Dan-Adrian, et al. <i>Securing Every Bit: Authenticated Broadcast in Radio Networks</i>. ACM, 2010, pp. 50–59, doi:<a href=\"https://doi.org/10.1145/1810479.1810489\">10.1145/1810479.1810489</a>.","ista":"Alistarh D-A, Gilbert S, Guerraoui R, Milošević Ž, Newport C. 2010. Securing every bit: Authenticated broadcast in radio networks. SPAA: Symposium on Parallelism in Algorithms and Architectures, 50–59.","chicago":"Alistarh, Dan-Adrian, Seth Gilbert, Rachid Guerraoui, Žarko Milošević, and Calvin Newport. “Securing Every Bit: Authenticated Broadcast in Radio Networks,” 50–59. ACM, 2010. <a href=\"https://doi.org/10.1145/1810479.1810489\">https://doi.org/10.1145/1810479.1810489</a>.","apa":"Alistarh, D.-A., Gilbert, S., Guerraoui, R., Milošević, Ž., &#38; Newport, C. (2010). Securing every bit: Authenticated broadcast in radio networks (pp. 50–59). Presented at the SPAA: Symposium on Parallelism in Algorithms and Architectures, ACM. <a href=\"https://doi.org/10.1145/1810479.1810489\">https://doi.org/10.1145/1810479.1810489</a>"},"article_processing_charge":"No","day":"01"},{"publisher":"Springer","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","month":"01","_id":"758","doi":"10.1007/978-3-642-15763-9_40","type":"conference","title":"Brief announcement: New bounds for partially synchronous set agreement","publication_status":"published","language":[{"iso":"eng"}],"date_published":"2010-01-01T00:00:00Z","oa_version":"None","conference":{"name":"DISC: Distributed Computing"},"author":[{"last_name":"Alistarh","first_name":"Dan-Adrian","full_name":"Alistarh, Dan-Adrian","id":"4A899BFC-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-3650-940X"},{"last_name":"Gilbert","first_name":"Seth","full_name":"Gilbert, Seth"},{"full_name":"Guerraoui, Rachid","first_name":"Rachid","last_name":"Guerraoui"},{"first_name":"Corentin","full_name":"Travers, Corentin","last_name":"Travers"}],"publist_id":"6899","alternative_title":["LNCS"],"date_updated":"2023-02-23T13:11:26Z","page":"404 - 405","year":"2010","date_created":"2018-12-11T11:48:21Z","abstract":[{"text":"Set agreement [4] is a fundamental problem in distributed computing, in which processes collectively choose a small subset of values from a larger set of proposals. Set agreement has been extensively studied in both synchronous and asynchronous systems [10,11,3,5,8,9]. Real world distributed systems, however, are neither purely synchronous nor purely asynchronous. To describe such a system, Dwork et al. [6] introduced the idea of partial synchrony. They assume for every execution some (unknown) time GST (global stabilization time), after which the system is synchronous. In a recent paper [1,2], we study the complexity of set agreement in the context of partially synchronous systems, determining the minimum-sized window of synchrony in which set agreement can be solved. We show that at least ⌊t/k⌋ + 2 synchronous rounds are required for k-set agreement, where t &lt; n is the number of crashes, and k is the agreement parameter of the set agreement task. We then introduce an algorithm that terminates in any window of synchrony of size at least ⌊t/k⌋ + 4 rounds. Together, these results tightly bound the inherent price of tolerating some asynchrony.","lang":"eng"}],"volume":"6343 LNCS","extern":"1","status":"public","article_processing_charge":"No","day":"01","citation":{"ama":"Alistarh D-A, Gilbert S, Guerraoui R, Travers C. Brief announcement: New bounds for partially synchronous set agreement. In: Vol 6343 LNCS. Springer; 2010:404-405. doi:<a href=\"https://doi.org/10.1007/978-3-642-15763-9_40\">10.1007/978-3-642-15763-9_40</a>","short":"D.-A. Alistarh, S. Gilbert, R. Guerraoui, C. Travers, in:, Springer, 2010, pp. 404–405.","mla":"Alistarh, Dan-Adrian, et al. <i>Brief Announcement: New Bounds for Partially Synchronous Set Agreement</i>. Vol. 6343 LNCS, Springer, 2010, pp. 404–05, doi:<a href=\"https://doi.org/10.1007/978-3-642-15763-9_40\">10.1007/978-3-642-15763-9_40</a>.","ieee":"D.-A. Alistarh, S. Gilbert, R. Guerraoui, and C. Travers, “Brief announcement: New bounds for partially synchronous set agreement,” presented at the DISC: Distributed Computing, 2010, vol. 6343 LNCS, pp. 404–405.","ista":"Alistarh D-A, Gilbert S, Guerraoui R, Travers C. 2010. Brief announcement: New bounds for partially synchronous set agreement. DISC: Distributed Computing, LNCS, vol. 6343 LNCS, 404–405.","chicago":"Alistarh, Dan-Adrian, Seth Gilbert, Rachid Guerraoui, and Corentin Travers. “Brief Announcement: New Bounds for Partially Synchronous Set Agreement,” 6343 LNCS:404–5. Springer, 2010. <a href=\"https://doi.org/10.1007/978-3-642-15763-9_40\">https://doi.org/10.1007/978-3-642-15763-9_40</a>.","apa":"Alistarh, D.-A., Gilbert, S., Guerraoui, R., &#38; Travers, C. (2010). Brief announcement: New bounds for partially synchronous set agreement (Vol. 6343 LNCS, pp. 404–405). Presented at the DISC: Distributed Computing, Springer. <a href=\"https://doi.org/10.1007/978-3-642-15763-9_40\">https://doi.org/10.1007/978-3-642-15763-9_40</a>"}},{"status":"public","abstract":[{"lang":"eng","text":"By combining gene expression profiling with image registration, Tomer et al. (2010) find that the mushroom body of the segmented worm Platynereis dumerilii shares many features with the mammalian cerebral cortex. The authors propose that the mushroom body and cortex evolved from the same structure in the common ancestor of vertebrates and invertebrates."}],"volume":142,"extern":"1","quality_controlled":"1","page":"679-681","year":"2010","date_created":"2020-04-30T10:36:52Z","date_updated":"2024-01-31T10:14:59Z","publication_identifier":{"issn":["0092-8674"]},"intvolume":"       142","citation":{"chicago":"Sweeney, Lora B., and Liqun Luo. “‘Fore Brain: A Hint of the Ancestral Cortex.” <i>Cell</i>. Elsevier, 2010. <a href=\"https://doi.org/10.1016/j.cell.2010.08.024\">https://doi.org/10.1016/j.cell.2010.08.024</a>.","apa":"Sweeney, L. B., &#38; Luo, L. (2010). ‘Fore brain: A hint of the ancestral cortex. <i>Cell</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.cell.2010.08.024\">https://doi.org/10.1016/j.cell.2010.08.024</a>","ista":"Sweeney LB, Luo L. 2010. ‘Fore brain: A hint of the ancestral cortex. Cell. 142(5), 679–681.","ieee":"L. B. Sweeney and L. Luo, “‘Fore brain: A hint of the ancestral cortex,” <i>Cell</i>, vol. 142, no. 5. Elsevier, pp. 679–681, 2010.","mla":"Sweeney, Lora B., and Liqun Luo. “‘Fore Brain: A Hint of the Ancestral Cortex.” <i>Cell</i>, vol. 142, no. 5, Elsevier, 2010, pp. 679–81, doi:<a href=\"https://doi.org/10.1016/j.cell.2010.08.024\">10.1016/j.cell.2010.08.024</a>.","short":"L.B. Sweeney, L. Luo, Cell 142 (2010) 679–681.","ama":"Sweeney LB, Luo L. ‘Fore brain: A hint of the ancestral cortex. <i>Cell</i>. 2010;142(5):679-681. doi:<a href=\"https://doi.org/10.1016/j.cell.2010.08.024\">10.1016/j.cell.2010.08.024</a>"},"day":"03","article_processing_charge":"No","title":"‘Fore brain: A hint of the ancestral cortex","publication_status":"published","language":[{"iso":"eng"}],"article_type":"original","type":"journal_article","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","month":"09","_id":"7703","doi":"10.1016/j.cell.2010.08.024","publisher":"Elsevier","issue":"5","publication":"Cell","author":[{"last_name":"Sweeney","full_name":"Sweeney, Lora Beatrice Jaeger","first_name":"Lora Beatrice Jaeger","orcid":"0000-0001-9242-5601","id":"56BE8254-C4F0-11E9-8E45-0B23E6697425"},{"full_name":"Luo, Liqun","first_name":"Liqun","last_name":"Luo"}],"oa_version":"None","date_published":"2010-09-03T00:00:00Z"},{"status":"public","abstract":[{"text":"This chapter tackles a difficult challenge: presenting signal processing material to non-experts. This chapter is meant to be comprehensible to people who have some math background, including a course in linear algebra and basic statistics, but do not specialize in mathematics, engineering, or related fields. Some formulas assume the reader is familiar with matrices and basic matrix operations, but not more advanced material. Furthermore, we tried to make the chapter readable even if you skip the formulas. Nevertheless, we include some simple methods to demonstrate the basics of adaptive data processing, then we proceed with some advanced methods that are fundamental in adaptive signal processing, and are likely to be useful in a variety of applications. The advanced algorithms are also online available [30]. In the second part, these techniques are applied to some real-world BCI data.","lang":"eng"}],"editor":[{"first_name":"Bernhard","full_name":"Graimann, Bernhard","last_name":"Graimann"},{"last_name":"Pfurtscheller","full_name":"Pfurtscheller, Gert","first_name":"Gert"},{"last_name":"Allison","first_name":"Brendan","full_name":"Allison, Brendan"}],"citation":{"apa":"Schlögl, A., Vidaurre, C., &#38; Müller, K.-R. (2010). Adaptive Methods in BCI Research - An Introductory Tutorial. In B. Graimann, G. Pfurtscheller, &#38; B. Allison (Eds.), <i>Brain-Computer Interfaces</i> (1st ed., pp. 331–355). Berlin, Heidelberg: Springer. <a href=\"https://doi.org/10.1007/978-3-642-02091-9_18\">https://doi.org/10.1007/978-3-642-02091-9_18</a>","chicago":"Schlögl, Alois, Carmen Vidaurre, and Klaus-Robert Müller. “Adaptive Methods in BCI Research - An Introductory Tutorial.” In <i>Brain-Computer Interfaces</i>, edited by Bernhard Graimann, Gert Pfurtscheller, and Brendan Allison, 1st ed., 331–55. FRONTCOLL. Berlin, Heidelberg: Springer, 2010. <a href=\"https://doi.org/10.1007/978-3-642-02091-9_18\">https://doi.org/10.1007/978-3-642-02091-9_18</a>.","ista":"Schlögl A, Vidaurre C, Müller K-R. 2010.Adaptive Methods in BCI Research - An Introductory Tutorial. In: Brain-Computer Interfaces. The Frontiers Collection, , 331–355.","mla":"Schlögl, Alois, et al. “Adaptive Methods in BCI Research - An Introductory Tutorial.” <i>Brain-Computer Interfaces</i>, edited by Bernhard Graimann et al., 1st ed., Springer, 2010, pp. 331–55, doi:<a href=\"https://doi.org/10.1007/978-3-642-02091-9_18\">10.1007/978-3-642-02091-9_18</a>.","ieee":"A. Schlögl, C. Vidaurre, and K.-R. Müller, “Adaptive Methods in BCI Research - An Introductory Tutorial,” in <i>Brain-Computer Interfaces</i>, 1st ed., B. Graimann, G. Pfurtscheller, and B. Allison, Eds. Berlin, Heidelberg: Springer, 2010, pp. 331–355.","short":"A. Schlögl, C. Vidaurre, K.-R. Müller, in:, B. Graimann, G. Pfurtscheller, B. Allison (Eds.), Brain-Computer Interfaces, 1st ed., Springer, Berlin, Heidelberg, 2010, pp. 331–355.","ama":"Schlögl A, Vidaurre C, Müller K-R. Adaptive Methods in BCI Research - An Introductory Tutorial. In: Graimann B, Pfurtscheller G, Allison B, eds. <i>Brain-Computer Interfaces</i>. 1st ed. FRONTCOLL. Berlin, Heidelberg: Springer; 2010:331-355. doi:<a href=\"https://doi.org/10.1007/978-3-642-02091-9_18\">10.1007/978-3-642-02091-9_18</a>"},"day":"06","title":"Adaptive Methods in BCI Research - An Introductory Tutorial","publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"14983","month":"09","place":"Berlin, Heidelberg","alternative_title":["The Frontiers Collection"],"acknowledgement":"This work was supported by the EU grants “BrainCom” (FP6-2004-Mobility-5 Grant No 024259) and “Multi-adaptive BCI” (MEIF-CT-2006 Grant No 040666). Furthermore, we thank Matthias Krauledat for fruitful discussions and tools for generating Fig. 5.","department":[{"_id":"ScienComp"}],"page":"331-355","quality_controlled":"1","series_title":"FRONTCOLL","date_created":"2024-02-14T09:56:00Z","year":"2010","date_updated":"2024-02-19T09:47:25Z","edition":"1","publication_identifier":{"eisbn":["9783642020919"],"isbn":["9783642020902"],"issn":["1612-3018"]},"article_processing_charge":"No","language":[{"iso":"eng"}],"type":"book_chapter","doi":"10.1007/978-3-642-02091-9_18","publisher":"Springer","publication":"Brain-Computer Interfaces","author":[{"first_name":"Alois","full_name":"Schlögl, Alois","last_name":"Schlögl","id":"45BF87EE-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-5621-8100"},{"last_name":"Vidaurre","full_name":"Vidaurre, Carmen","first_name":"Carmen"},{"last_name":"Müller","full_name":"Müller, Klaus-Robert","first_name":"Klaus-Robert"}],"oa_version":"None","date_published":"2010-09-06T00:00:00Z"},{"author":[{"orcid":"0000-0003-4509-4998","id":"3959A2A0-F248-11E8-B48F-1D18A9856A87","full_name":"Anna Kicheva","first_name":"Anna","last_name":"Kicheva"},{"first_name":"James","full_name":"Briscoe, James","last_name":"Briscoe"}],"issue":"7","publication":"PLoS Biology","publist_id":"5407","acknowledgement":"AK is funded by a Marie Curie fellowship. JB is funded by the MRC (UK). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript","date_published":"2010-07-01T00:00:00Z","type":"journal_article","publication_status":"published","title":"Limbs made to measure","publisher":"Public Library of Science","month":"07","_id":"1721","doi":"10.1371/journal.pbio.1000421","intvolume":"         8","citation":{"ista":"Kicheva A, Briscoe J. 2010. Limbs made to measure. PLoS Biology. 8(7).","chicago":"Kicheva, Anna, and James Briscoe. “Limbs Made to Measure.” <i>PLoS Biology</i>. Public Library of Science, 2010. <a href=\"https://doi.org/10.1371/journal.pbio.1000421\">https://doi.org/10.1371/journal.pbio.1000421</a>.","apa":"Kicheva, A., &#38; Briscoe, J. (2010). Limbs made to measure. <i>PLoS Biology</i>. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pbio.1000421\">https://doi.org/10.1371/journal.pbio.1000421</a>","mla":"Kicheva, Anna, and James Briscoe. “Limbs Made to Measure.” <i>PLoS Biology</i>, vol. 8, no. 7, Public Library of Science, 2010, doi:<a href=\"https://doi.org/10.1371/journal.pbio.1000421\">10.1371/journal.pbio.1000421</a>.","ieee":"A. Kicheva and J. Briscoe, “Limbs made to measure,” <i>PLoS Biology</i>, vol. 8, no. 7. Public Library of Science, 2010.","short":"A. Kicheva, J. Briscoe, PLoS Biology 8 (2010).","ama":"Kicheva A, Briscoe J. Limbs made to measure. <i>PLoS Biology</i>. 2010;8(7). doi:<a href=\"https://doi.org/10.1371/journal.pbio.1000421\">10.1371/journal.pbio.1000421</a>"},"day":"01","extern":1,"volume":8,"status":"public","date_updated":"2021-01-12T06:52:45Z","year":"2010","date_created":"2018-12-11T11:53:39Z","quality_controlled":0},{"publication_status":"published","title":"Dynamic assignment and maintenance of positional identity in the ventral neural tube by the morphogen sonic hedgehog","type":"journal_article","month":"06","_id":"1722","doi":"10.1371/journal.pbio.1000382","publisher":"Public Library of Science","publist_id":"5408","publication":"PLoS Biology","issue":"6","author":[{"last_name":"Dessaud","first_name":"Éric","full_name":"Dessaud, Éric"},{"first_name":"Vanessa","full_name":"Ribes, Vanessa","last_name":"Ribes"},{"first_name":"Nikolaos","full_name":"Balaskas, Nikolaos","last_name":"Balaskas"},{"full_name":"Yang, Linlin","first_name":"Linlin","last_name":"Yang"},{"last_name":"Pierani","full_name":"Pierani, Alessandra","first_name":"Alessandra"},{"first_name":"Anna","full_name":"Anna Kicheva","last_name":"Kicheva","id":"3959A2A0-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-4509-4998"},{"last_name":"Novitch","first_name":"Bennett","full_name":"Novitch, Bennett"},{"last_name":"Briscoe","first_name":"James","full_name":"Briscoe, James"},{"first_name":"Noriaki","full_name":"Sasai, Noriaki","last_name":"Sasai"}],"acknowledgement":"NS was supported by a Marie Curie Fellowship (PIIF-GA-2008-219939) and the Mochida Memorial Foundation for Medical and Pharmaceutical Research. Support for VR was provided by an EMBO LTF, for AK by a FEBS LTF. ED was supported by the Wellcome Trust (#080630). Work in the lab of JB is supported by the Medical Research Council (UK). AP is a CNRS (Centre National de la Recherche Scientifique) Investigator. This work was supported by grants from the Ministère de la Recherche (ACI Grant #0220575) and the Association pour la Recherche sur le Cancer (Grant #4679) to AP. BGN was supported by grants from the Whitehall Foundation (2004-05-90-APL), the March of Dimes Foundation (5-FY2006-281), the Muscular Dystrophy Association (92901), and the NINDS (NS053976)","date_published":"2010-06-01T00:00:00Z","status":"public","extern":1,"abstract":[{"lang":"eng","text":"Morphogens are secreted signalling molecules that act in a graded manner to control the pattern of cellular differentiation in developing tissues. An example is Sonic hedgehog (Shh), which acts in several developing vertebrate tissues, including the central nervous system, to provide positional information during embryonic patterning. Here we address how Shh signalling assigns the positional identities of distinct neuronal subtype progenitors throughout the ventral neural tube. Assays of intracellular signal transduction and gene expression indicate that the duration as well as level of signalling is critical for morphogen interpretation. Progenitors of the ventral neuronal subtypes are established sequentially, with progressively more ventral identities requiring correspondingly higher levels and longer periods of Shh signalling. Moreover, cells remain sensitive to changes in Shh signalling for an extended time, reverting to antecedent identities if signalling levels fall below a threshold. Thus, the duration of signalling is important not only for the assignment but also for the refinement and maintenance of positional identity. Together the data suggest a dynamic model for ventral neural tube patterning in which positional information corresponds to the time integral of Shh signalling. This suggests an alternative to conventional models of morphogen action that rely solely on the level of signalling."}],"volume":8,"date_created":"2018-12-11T11:53:39Z","year":"2010","quality_controlled":0,"date_updated":"2021-01-12T06:52:46Z","citation":{"short":"É. Dessaud, V. Ribes, N. Balaskas, L. Yang, A. Pierani, A. Kicheva, B. Novitch, J. Briscoe, N. Sasai, PLoS Biology 8 (2010).","ama":"Dessaud É, Ribes V, Balaskas N, et al. Dynamic assignment and maintenance of positional identity in the ventral neural tube by the morphogen sonic hedgehog. <i>PLoS Biology</i>. 2010;8(6). doi:<a href=\"https://doi.org/10.1371/journal.pbio.1000382\">10.1371/journal.pbio.1000382</a>","apa":"Dessaud, É., Ribes, V., Balaskas, N., Yang, L., Pierani, A., Kicheva, A., … Sasai, N. (2010). Dynamic assignment and maintenance of positional identity in the ventral neural tube by the morphogen sonic hedgehog. <i>PLoS Biology</i>. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pbio.1000382\">https://doi.org/10.1371/journal.pbio.1000382</a>","ista":"Dessaud É, Ribes V, Balaskas N, Yang L, Pierani A, Kicheva A, Novitch B, Briscoe J, Sasai N. 2010. Dynamic assignment and maintenance of positional identity in the ventral neural tube by the morphogen sonic hedgehog. PLoS Biology. 8(6).","chicago":"Dessaud, Éric, Vanessa Ribes, Nikolaos Balaskas, Linlin Yang, Alessandra Pierani, Anna Kicheva, Bennett Novitch, James Briscoe, and Noriaki Sasai. “Dynamic Assignment and Maintenance of Positional Identity in the Ventral Neural Tube by the Morphogen Sonic Hedgehog.” <i>PLoS Biology</i>. Public Library of Science, 2010. <a href=\"https://doi.org/10.1371/journal.pbio.1000382\">https://doi.org/10.1371/journal.pbio.1000382</a>.","ieee":"É. Dessaud <i>et al.</i>, “Dynamic assignment and maintenance of positional identity in the ventral neural tube by the morphogen sonic hedgehog,” <i>PLoS Biology</i>, vol. 8, no. 6. Public Library of Science, 2010.","mla":"Dessaud, Éric, et al. “Dynamic Assignment and Maintenance of Positional Identity in the Ventral Neural Tube by the Morphogen Sonic Hedgehog.” <i>PLoS Biology</i>, vol. 8, no. 6, Public Library of Science, 2010, doi:<a href=\"https://doi.org/10.1371/journal.pbio.1000382\">10.1371/journal.pbio.1000382</a>."},"intvolume":"         8","day":"01"},{"publication_status":"published","title":"Hybrid superconductor-semiconductor devices made from self-assembled SiGe nanocrystals on silicon","oa":1,"type":"journal_article","_id":"1752","doi":"10.1038/nnano.2010.84","month":"06","publisher":"Nature Publishing Group","publication":"Nature Nanotechnology","publist_id":"5372","issue":"6","author":[{"last_name":"Katsaros","full_name":"Georgios Katsaros","first_name":"Georgios","id":"38DB5788-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Spathis","first_name":"Panayotis","full_name":"Spathis, Panayotis N"},{"first_name":"Mathieu","full_name":"Stoffel, Mathieu","last_name":"Stoffel"},{"full_name":"Fournel, Frank","first_name":"Frank","last_name":"Fournel"},{"first_name":"Massimo","full_name":"Mongillo, Massimo","last_name":"Mongillo"},{"full_name":"Bouchiat, Vincent","first_name":"Vincent","last_name":"Bouchiat"},{"last_name":"Lefloch","first_name":"François","full_name":"Lefloch, François"},{"last_name":"Rastelli","full_name":"Rastelli, Armando","first_name":"Armando"},{"first_name":"Oliver","full_name":"Schmidt, Oliver G","last_name":"Schmidt"},{"last_name":"De Franceschi","first_name":"Silvano","full_name":"De Franceschi, Silvano"}],"acknowledgement":"We also acknowledge support from the Agence Nationale de la Recherche (through the ACCESS and COHESION projects). G.K. acknowledges further support from the Deutsche Forschungsgemeinschaft (grant no. KA 2922/1-1)","date_published":"2010-06-01T00:00:00Z","status":"public","extern":1,"abstract":[{"text":"The epitaxial growth of germanium on silicon leads to the self-assembly of SiGe nanocrystals by a process that allows the size, composition and position of the nanocrystals to be controlled. This level of control, combined with an inherent compatibility with silicon technology, could prove useful in nanoelectronic applications. Here, we report the confinement of holes in quantum-dot devices made by directly contacting individual SiGe nanocrystals with aluminium electrodes, and the production of hybrid superconductor- semiconductor devices, such as resonant supercurrent transistors, when the quantum dot is strongly coupled to the electrodes. Charge transport measurements on weakly coupled quantum dots reveal discrete energy spectra, with the confined hole states displaying anisotropic gyromagnetic factors and strong spin-orbit coupling with pronounced dependences on gate voltage and magnetic field.","lang":"eng"}],"volume":5,"year":"2010","date_created":"2018-12-11T11:53:49Z","page":"458 - 464","quality_controlled":0,"date_updated":"2021-01-12T06:52:59Z","intvolume":"         5","citation":{"ama":"Katsaros G, Spathis P, Stoffel M, et al. Hybrid superconductor-semiconductor devices made from self-assembled SiGe nanocrystals on silicon. <i>Nature Nanotechnology</i>. 2010;5(6):458-464. doi:<a href=\"https://doi.org/10.1038/nnano.2010.84\">10.1038/nnano.2010.84</a>","short":"G. Katsaros, P. Spathis, M. Stoffel, F. Fournel, M. Mongillo, V. Bouchiat, F. Lefloch, A. Rastelli, O. Schmidt, S. De Franceschi, Nature Nanotechnology 5 (2010) 458–464.","mla":"Katsaros, Georgios, et al. “Hybrid Superconductor-Semiconductor Devices Made from Self-Assembled SiGe Nanocrystals on Silicon.” <i>Nature Nanotechnology</i>, vol. 5, no. 6, Nature Publishing Group, 2010, pp. 458–64, doi:<a href=\"https://doi.org/10.1038/nnano.2010.84\">10.1038/nnano.2010.84</a>.","ieee":"G. Katsaros <i>et al.</i>, “Hybrid superconductor-semiconductor devices made from self-assembled SiGe nanocrystals on silicon,” <i>Nature Nanotechnology</i>, vol. 5, no. 6. Nature Publishing Group, pp. 458–464, 2010.","ista":"Katsaros G, Spathis P, Stoffel M, Fournel F, Mongillo M, Bouchiat V, Lefloch F, Rastelli A, Schmidt O, De Franceschi S. 2010. Hybrid superconductor-semiconductor devices made from self-assembled SiGe nanocrystals on silicon. Nature Nanotechnology. 5(6), 458–464.","apa":"Katsaros, G., Spathis, P., Stoffel, M., Fournel, F., Mongillo, M., Bouchiat, V., … De Franceschi, S. (2010). Hybrid superconductor-semiconductor devices made from self-assembled SiGe nanocrystals on silicon. <i>Nature Nanotechnology</i>. Nature Publishing Group. <a href=\"https://doi.org/10.1038/nnano.2010.84\">https://doi.org/10.1038/nnano.2010.84</a>","chicago":"Katsaros, Georgios, Panayotis Spathis, Mathieu Stoffel, Frank Fournel, Massimo Mongillo, Vincent Bouchiat, François Lefloch, Armando Rastelli, Oliver Schmidt, and Silvano De Franceschi. “Hybrid Superconductor-Semiconductor Devices Made from Self-Assembled SiGe Nanocrystals on Silicon.” <i>Nature Nanotechnology</i>. Nature Publishing Group, 2010. <a href=\"https://doi.org/10.1038/nnano.2010.84\">https://doi.org/10.1038/nnano.2010.84</a>."},"main_file_link":[{"url":"http://arxiv.org/abs/1005.1816","open_access":"1"}],"day":"01"},{"date_updated":"2021-01-12T06:52:59Z","quality_controlled":0,"page":"3545 - 3550","date_created":"2018-12-11T11:53:49Z","year":"2010","abstract":[{"lang":"eng","text":"We investigate electronic transport in n-i-n GaN nanowires with and without AlN double barriers. The nanowires are grown by catalyst-free, plasma-assisted molecular beam epitaxy enabling abrupt GaN/AlN interfaces as well as longitudinal n-type doping modulation. At low temperature, transport in n-i-n GaN nanowires is dominated by the Coulomb blockade effect. Carriers are confined in the undoped middle region, forming single or multiple islands with a characteristic length of ∼100 nm. The incorporation of two AlN tunnel barriers causes confinement to occur within the GaN dot in between. In the case of a 6 nm thick dot and 2 nm thick barriers, we observe characteristic signatures of Coulomb-blockaded transport in single quantum dots with discrete energy states. For thinner dots and barriers, Coulomb-blockade effects do not play a significant role while the onset of resonant tunneling via the confined quantum levels is accompanied by a negative differential resistance surviving up to ∼150 K."}],"volume":10,"extern":1,"status":"public","day":"08","citation":{"ama":"Songmuang R, Katsaros G, Monroy E, et al. Quantum transport in GaN/AlN double-barrier heterostructure nanowires. <i>Nano Letters</i>. 2010;10(9):3545-3550. doi:<a href=\"https://doi.org/10.1021/nl1017578\">10.1021/nl1017578</a>","short":"R. Songmuang, G. Katsaros, E. Monroy, P. Spathis, C. Bougerol, M. Mongillo, S. De Franceschi, Nano Letters 10 (2010) 3545–3550.","ieee":"R. Songmuang <i>et al.</i>, “Quantum transport in GaN/AlN double-barrier heterostructure nanowires,” <i>Nano Letters</i>, vol. 10, no. 9. American Chemical Society, pp. 3545–3550, 2010.","mla":"Songmuang, Rudeeson, et al. “Quantum Transport in GaN/AlN Double-Barrier Heterostructure Nanowires.” <i>Nano Letters</i>, vol. 10, no. 9, American Chemical Society, 2010, pp. 3545–50, doi:<a href=\"https://doi.org/10.1021/nl1017578\">10.1021/nl1017578</a>.","apa":"Songmuang, R., Katsaros, G., Monroy, E., Spathis, P., Bougerol, C., Mongillo, M., &#38; De Franceschi, S. (2010). Quantum transport in GaN/AlN double-barrier heterostructure nanowires. <i>Nano Letters</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/nl1017578\">https://doi.org/10.1021/nl1017578</a>","chicago":"Songmuang, Rudeeson, Georgios Katsaros, Eva Monroy, Panayotis Spathis, Catherine Bougerol, Massimo Mongillo, and Silvano De Franceschi. “Quantum Transport in GaN/AlN Double-Barrier Heterostructure Nanowires.” <i>Nano Letters</i>. American Chemical Society, 2010. <a href=\"https://doi.org/10.1021/nl1017578\">https://doi.org/10.1021/nl1017578</a>.","ista":"Songmuang R, Katsaros G, Monroy E, Spathis P, Bougerol C, Mongillo M, De Franceschi S. 2010. Quantum transport in GaN/AlN double-barrier heterostructure nanowires. Nano Letters. 10(9), 3545–3550."},"main_file_link":[{"url":"http://arxiv.org/abs/1005.3637","open_access":"1"}],"intvolume":"        10","publisher":"American Chemical Society","month":"09","_id":"1753","doi":"10.1021/nl1017578","type":"journal_article","oa":1,"title":"Quantum transport in GaN/AlN double-barrier heterostructure nanowires","publication_status":"published","date_published":"2010-09-08T00:00:00Z","acknowledgement":"This research was partly funded by the Agence Nationale de la Recherche through the COHESION project. G.K. acknowledges further support from the Deutsche Forschungsgemeinschaft (Grant KA 2922/1-1)","author":[{"last_name":"Songmuang","first_name":"Rudeeson","full_name":"Songmuang, Rudeeson"},{"first_name":"Georgios","full_name":"Georgios Katsaros","last_name":"Katsaros","id":"38DB5788-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Monroy","first_name":"Eva","full_name":"Monroy, Eva"},{"last_name":"Spathis","first_name":"Panayotis","full_name":"Spathis, Panayotis N"},{"full_name":"Bougerol, Catherine","first_name":"Catherine","last_name":"Bougerol"},{"last_name":"Mongillo","full_name":"Mongillo, Massimo","first_name":"Massimo"},{"last_name":"De Franceschi","full_name":"De Franceschi, Silvano","first_name":"Silvano"}],"publication":"Nano Letters","issue":"9","publist_id":"5371"},{"_id":"1772","doi":"10.1103/PhysRevLett.104.100504","month":"03","publisher":"American Physical Society","publication_status":"published","title":"Cavity quantum electrodynamics with separate photon storage and qubit readout modes","type":"journal_article","acknowledgement":"This work was supported financially by the Swiss National Science Foundation, by the EC via the EuroSQIP project and by ETH Zurich","date_published":"2010-03-10T00:00:00Z","publication":"Physical Review Letters","publist_id":"5345","issue":"10","author":[{"last_name":"Leek","first_name":"Peter","full_name":"Leek, Peter J"},{"full_name":"Baur, Matthias P","first_name":"Matthias","last_name":"Baur"},{"id":"4B591CBA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-8112-028X","last_name":"Fink","first_name":"Johannes M","full_name":"Johannes Fink"},{"first_name":"R","full_name":"Bianchetti, R","last_name":"Bianchetti"},{"first_name":"L.","full_name":"Steffen, L. Kraig","last_name":"Steffen"},{"full_name":"Filipp, Stefan","first_name":"Stefan","last_name":"Filipp"},{"first_name":"Andreas","full_name":"Wallraff, Andreas","last_name":"Wallraff"}],"date_created":"2018-12-11T11:53:55Z","year":"2010","quality_controlled":0,"date_updated":"2021-01-12T06:53:06Z","status":"public","extern":1,"volume":104,"abstract":[{"text":"We present the realization of a cavity quantum electrodynamics setup in which photons of strongly different lifetimes are engineered in different harmonic modes of the same cavity. We achieve this in a superconducting transmission line resonator with superconducting qubits coupled to the different modes. One cavity mode is strongly coupled to a detection line for qubit state readout, while a second long lifetime mode is used for photon storage and coherent quantum operations. We demonstrate sideband-based measurement of photon coherence, generation of n photon Fock states and the scaling of the sideband Rabi frequency with √n using a scheme that may be extended to realize sideband-based two-qubit logic gates.","lang":"eng"}],"day":"10","intvolume":"       104","citation":{"short":"P. Leek, M. Baur, J.M. Fink, R. Bianchetti, L. Steffen, S. Filipp, A. Wallraff, Physical Review Letters 104 (2010).","ama":"Leek P, Baur M, Fink JM, et al. Cavity quantum electrodynamics with separate photon storage and qubit readout modes. <i>Physical Review Letters</i>. 2010;104(10). doi:<a href=\"https://doi.org/10.1103/PhysRevLett.104.100504\">10.1103/PhysRevLett.104.100504</a>","apa":"Leek, P., Baur, M., Fink, J. M., Bianchetti, R., Steffen, L., Filipp, S., &#38; Wallraff, A. (2010). Cavity quantum electrodynamics with separate photon storage and qubit readout modes. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevLett.104.100504\">https://doi.org/10.1103/PhysRevLett.104.100504</a>","chicago":"Leek, Peter, Matthias Baur, Johannes M Fink, R Bianchetti, L. Steffen, Stefan Filipp, and Andreas Wallraff. “Cavity Quantum Electrodynamics with Separate Photon Storage and Qubit Readout Modes.” <i>Physical Review Letters</i>. American Physical Society, 2010. <a href=\"https://doi.org/10.1103/PhysRevLett.104.100504\">https://doi.org/10.1103/PhysRevLett.104.100504</a>.","ista":"Leek P, Baur M, Fink JM, Bianchetti R, Steffen L, Filipp S, Wallraff A. 2010. Cavity quantum electrodynamics with separate photon storage and qubit readout modes. Physical Review Letters. 104(10).","mla":"Leek, Peter, et al. “Cavity Quantum Electrodynamics with Separate Photon Storage and Qubit Readout Modes.” <i>Physical Review Letters</i>, vol. 104, no. 10, American Physical Society, 2010, doi:<a href=\"https://doi.org/10.1103/PhysRevLett.104.100504\">10.1103/PhysRevLett.104.100504</a>.","ieee":"P. Leek <i>et al.</i>, “Cavity quantum electrodynamics with separate photon storage and qubit readout modes,” <i>Physical Review Letters</i>, vol. 104, no. 10. American Physical Society, 2010."}},{"publist_id":"5343","publication":"Physical Review Letters","issue":"16","author":[{"full_name":"Johannes Fink","first_name":"Johannes M","last_name":"Fink","id":"4B591CBA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-8112-028X"},{"full_name":"Steffen, L. Kraig","first_name":"L.","last_name":"Steffen"},{"last_name":"Studer","first_name":"Peter","full_name":"Studer, Peter"},{"last_name":"Bishop","full_name":"Bishop, Lev S","first_name":"Lev"},{"first_name":"Matthias","full_name":"Baur, Matthias P","last_name":"Baur"},{"full_name":"Bianchetti, R","first_name":"R","last_name":"Bianchetti"},{"full_name":"Bozyigit, Deniz","first_name":"Deniz","last_name":"Bozyigit"},{"full_name":"Lang, C","first_name":"C","last_name":"Lang"},{"last_name":"Filipp","full_name":"Filipp, Stefan","first_name":"Stefan"},{"last_name":"Leek","first_name":"Peter","full_name":"Leek, Peter J"},{"last_name":"Wallraff","first_name":"Andreas","full_name":"Wallraff, Andreas"}],"acknowledgement":"This work was supported by SNF, EuroSQIP and ETHZ. L. S. B. acknowledges support by LPS/NSA under ARO contract No. W911NF-05-1-0365 and the NSF under grant No. DMR-0653377","date_published":"2010-10-14T00:00:00Z","publication_status":"published","oa":1,"title":"Quantum-to-classical transition in cavity quantum electrodynamics","type":"journal_article","_id":"1773","doi":"10.1103/PhysRevLett.105.163601","month":"10","publisher":"American Physical Society","intvolume":"       105","main_file_link":[{"url":"http://arxiv.org/abs/1003.1161","open_access":"1"}],"citation":{"ista":"Fink JM, Steffen L, Studer P, Bishop L, Baur M, Bianchetti R, Bozyigit D, Lang C, Filipp S, Leek P, Wallraff A. 2010. Quantum-to-classical transition in cavity quantum electrodynamics. Physical Review Letters. 105(16).","chicago":"Fink, Johannes M, L. Steffen, Peter Studer, Lev Bishop, Matthias Baur, R Bianchetti, Deniz Bozyigit, et al. “Quantum-to-Classical Transition in Cavity Quantum Electrodynamics.” <i>Physical Review Letters</i>. American Physical Society, 2010. <a href=\"https://doi.org/10.1103/PhysRevLett.105.163601\">https://doi.org/10.1103/PhysRevLett.105.163601</a>.","apa":"Fink, J. M., Steffen, L., Studer, P., Bishop, L., Baur, M., Bianchetti, R., … Wallraff, A. (2010). Quantum-to-classical transition in cavity quantum electrodynamics. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevLett.105.163601\">https://doi.org/10.1103/PhysRevLett.105.163601</a>","ieee":"J. M. Fink <i>et al.</i>, “Quantum-to-classical transition in cavity quantum electrodynamics,” <i>Physical Review Letters</i>, vol. 105, no. 16. American Physical Society, 2010.","mla":"Fink, Johannes M., et al. “Quantum-to-Classical Transition in Cavity Quantum Electrodynamics.” <i>Physical Review Letters</i>, vol. 105, no. 16, American Physical Society, 2010, doi:<a href=\"https://doi.org/10.1103/PhysRevLett.105.163601\">10.1103/PhysRevLett.105.163601</a>.","short":"J.M. Fink, L. Steffen, P. Studer, L. Bishop, M. Baur, R. Bianchetti, D. Bozyigit, C. Lang, S. Filipp, P. Leek, A. Wallraff, Physical Review Letters 105 (2010).","ama":"Fink JM, Steffen L, Studer P, et al. Quantum-to-classical transition in cavity quantum electrodynamics. <i>Physical Review Letters</i>. 2010;105(16). doi:<a href=\"https://doi.org/10.1103/PhysRevLett.105.163601\">10.1103/PhysRevLett.105.163601</a>"},"day":"14","status":"public","extern":1,"abstract":[{"lang":"eng","text":"The quantum properties of electromagnetic, mechanical or other harmonic oscillators can be revealed by investigating their strong coherent coupling to a single quantum two level system in an approach known as cavity quantum electrodynamics (QED). At temperatures much lower than the characteristic energy level spacing the observation of vacuum Rabi oscillations or mode splittings with one or a few quanta asserts the quantum nature of the oscillator. Here, we study how the classical response of a cavity QED system emerges from the quantum one when its thermal occupation-or effective temperature-is raised gradually over 5 orders of magnitude. In this way we explore in detail the continuous quantum-to-classical crossover and demonstrate how to extract effective cavity field temperatures from both spectroscopic and time-resolved vacuum Rabi measurements."}],"volume":105,"date_created":"2018-12-11T11:53:56Z","year":"2010","quality_controlled":0,"date_updated":"2021-01-12T06:53:07Z"},{"date_published":"2010-11-24T00:00:00Z","acknowledgement":"This work was supported by SNF, ETHZ, the Austrian Science Foundation (FWF), and the EU projects SOLID and GEOMDISS. A. B. is supported by NSERC, the Alfred P. Sloan Foundation, and CIFAR","author":[{"first_name":"R","full_name":"Bianchetti, R","last_name":"Bianchetti"},{"last_name":"Filipp","first_name":"Stefan","full_name":"Filipp, Stefan"},{"full_name":"Baur, Matthias P","first_name":"Matthias","last_name":"Baur"},{"first_name":"Johannes M","full_name":"Johannes Fink","last_name":"Fink","id":"4B591CBA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-8112-028X"},{"last_name":"Lang","first_name":"C","full_name":"Lang, C"},{"last_name":"Steffen","full_name":"Steffen, L. Kraig","first_name":"L."},{"last_name":"Boissonneault","first_name":"Maxime","full_name":"Boissonneault, Maxime"},{"full_name":"Blais, Alexandre","first_name":"Alexandre","last_name":"Blais"},{"full_name":"Wallraff, Andreas","first_name":"Andreas","last_name":"Wallraff"}],"publist_id":"5341","publication":"Physical Review Letters","issue":"22","publisher":"American Physical Society","month":"11","_id":"1774","doi":"10.1103/PhysRevLett.105.223601","type":"journal_article","oa":1,"title":"Control and tomography of a three level superconducting artificial atom","publication_status":"published","day":"24","intvolume":"       105","citation":{"apa":"Bianchetti, R., Filipp, S., Baur, M., Fink, J. M., Lang, C., Steffen, L., … Wallraff, A. (2010). Control and tomography of a three level superconducting artificial atom. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevLett.105.223601\">https://doi.org/10.1103/PhysRevLett.105.223601</a>","ista":"Bianchetti R, Filipp S, Baur M, Fink JM, Lang C, Steffen L, Boissonneault M, Blais A, Wallraff A. 2010. Control and tomography of a three level superconducting artificial atom. Physical Review Letters. 105(22).","chicago":"Bianchetti, R, Stefan Filipp, Matthias Baur, Johannes M Fink, C Lang, L. Steffen, Maxime Boissonneault, Alexandre Blais, and Andreas Wallraff. “Control and Tomography of a Three Level Superconducting Artificial Atom.” <i>Physical Review Letters</i>. American Physical Society, 2010. <a href=\"https://doi.org/10.1103/PhysRevLett.105.223601\">https://doi.org/10.1103/PhysRevLett.105.223601</a>.","ieee":"R. Bianchetti <i>et al.</i>, “Control and tomography of a three level superconducting artificial atom,” <i>Physical Review Letters</i>, vol. 105, no. 22. American Physical Society, 2010.","mla":"Bianchetti, R., et al. “Control and Tomography of a Three Level Superconducting Artificial Atom.” <i>Physical Review Letters</i>, vol. 105, no. 22, American Physical Society, 2010, doi:<a href=\"https://doi.org/10.1103/PhysRevLett.105.223601\">10.1103/PhysRevLett.105.223601</a>.","short":"R. Bianchetti, S. Filipp, M. Baur, J.M. Fink, C. Lang, L. Steffen, M. Boissonneault, A. Blais, A. Wallraff, Physical Review Letters 105 (2010).","ama":"Bianchetti R, Filipp S, Baur M, et al. Control and tomography of a three level superconducting artificial atom. <i>Physical Review Letters</i>. 2010;105(22). doi:<a href=\"https://doi.org/10.1103/PhysRevLett.105.223601\">10.1103/PhysRevLett.105.223601</a>"},"main_file_link":[{"url":"http://arxiv.org/abs/1004.5504","open_access":"1"}],"date_updated":"2021-01-12T06:53:07Z","quality_controlled":0,"year":"2010","date_created":"2018-12-11T11:53:56Z","abstract":[{"text":"A number of superconducting qubits, such as the transmon or the phase qubit, have an energy level structure with small anharmonicity. This allows for convenient access of higher excited states with similar frequencies. However, special care has to be taken to avoid unwanted higher-level populations when using short control pulses. Here we demonstrate the preparation of arbitrary three level superposition states using optimal control techniques in a transmon. Performing dispersive readout, we extract the populations of all three levels of the qutrit and study the coherence of its excited states. Finally we demonstrate full quantum state tomography of the prepared qutrit states and evaluate the fidelities of a set of states, finding on average 95%.","lang":"eng"}],"volume":105,"extern":1,"status":"public"},{"publisher":"American Association for the Advancement of Science","doi":"10.1126/science.1190897","_id":"1800","month":"07","type":"journal_article","publication_status":"published","title":"Genetic reactivation of cone photoreceptors restores visual responses in retinitis pigmentosa","acknowledgement":"This study was supported by Friedrich Miescher Institute funds; a U.S. Office of Naval Research Naval International Cooperative Opportunities in Science and Technology Program grant; a Marie Curie Excellence grant and a European Union (EU) HEALTH-F2-223156 grant to B.R.; a grant from the EU (RETICIRC) to B.R. and S.P.; grants from the Agence nationale de la recherche (MEDINAS, RETINE) to S.P.; a Center Grant from Foundation Fighting Blindness (U.S.) to S.M.-S. and J.A.S.; grants from the Swiss National Science Foundation and the EU to D.T.; a grant from the EU (TREATRUSH) to J.A.S., S.P., and B.R.; a Marie Curie Postdoctoral Fellowship to D.B.; and a National Centers of Competence in Research Frontiers in Genetics fellowship to V.B. and A.C.G. The Ocular Genetics Unit at Trinity College Dublin is supported by Science Foundation Ireland","date_published":"2010-07-23T00:00:00Z","author":[{"full_name":"Busskamp, Volker","first_name":"Volker","last_name":"Busskamp"},{"full_name":"Duebel, Jens","first_name":"Jens","last_name":"Duebel"},{"last_name":"Bálya","first_name":"Dávid","full_name":"Bálya, Dávid"},{"first_name":"Mathias","full_name":"Fradot, Mathias","last_name":"Fradot"},{"last_name":"Viney","first_name":"Tim","full_name":"Viney, Tim J"},{"id":"36ACD32E-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-8635-0877","last_name":"Siegert","full_name":"Sandra Siegert","first_name":"Sandra"},{"full_name":"Groner, Anna C","first_name":"Anna","last_name":"Groner"},{"last_name":"Cabuy","full_name":"Cabuy, Erik","first_name":"Erik"},{"first_name":"Valérie","full_name":"Forster, Valérie","last_name":"Forster"},{"full_name":"Seeliger, Mathias W","first_name":"Mathias","last_name":"Seeliger"},{"first_name":"Martin","full_name":"Biel, Martin","last_name":"Biel"},{"last_name":"Humphries","first_name":"Peter","full_name":"Humphries, Peter"},{"full_name":"Pâques, Michel","first_name":"Michel","last_name":"Pâques"},{"last_name":"Mohand Saïd","first_name":"Saddek","full_name":"Mohand-Saïd, Saddek"},{"first_name":"Didier","full_name":"Trono, Didier","last_name":"Trono"},{"full_name":"Deisseroth, Karl A","first_name":"Karl","last_name":"Deisseroth"},{"last_name":"Sähel","first_name":"José","full_name":"Sähel, José A"},{"last_name":"Picaud","full_name":"Picaud, Serge A","first_name":"Serge"},{"last_name":"Roska","first_name":"Botond","full_name":"Roska, Botond M"}],"publication":"Science","publist_id":"5310","issue":"5990","date_updated":"2021-01-12T06:53:17Z","year":"2010","date_created":"2018-12-11T11:54:05Z","page":"413 - 417","quality_controlled":0,"extern":1,"abstract":[{"text":"Retinitis pigmentosa refers to a diverse group of hereditary diseases that lead to incurable blindness, affecting two million people worldwide. As a common pathology, rod photoreceptors die early, whereas light-insensitive, morphologically altered cone photoreceptors persist longer. It is unknown if these cones are accessible for therapeutic intervention. Here, we show that expression of archaebacterial halorhodopsin in light-insensitive cones can substitute for the native phototransduction cascade and restore light sensitivity in mouse models of retinitis pigmentosa. Resensitized photoreceptors activate all retinal cone pathways, drive sophisticated retinal circuit functions (including directional selectivity), activate cortical circuits, and mediate visually guided behaviors. Using human ex vivo retinas, we show that halorhodopsin can reactivate light-insensitive human photoreceptors. Finally, we identified blind patients with persisting, light-insensitive cones for potential halorhodopsin-based therapy.","lang":"eng"}],"volume":329,"status":"public","day":"23","citation":{"ista":"Busskamp V, Duebel J, Bálya D, Fradot M, Viney T, Siegert S, Groner A, Cabuy E, Forster V, Seeliger M, Biel M, Humphries P, Pâques M, Mohand Saïd S, Trono D, Deisseroth K, Sähel J, Picaud S, Roska B. 2010. Genetic reactivation of cone photoreceptors restores visual responses in retinitis pigmentosa. Science. 329(5990), 413–417.","apa":"Busskamp, V., Duebel, J., Bálya, D., Fradot, M., Viney, T., Siegert, S., … Roska, B. (2010). Genetic reactivation of cone photoreceptors restores visual responses in retinitis pigmentosa. <i>Science</i>. American Association for the Advancement of Science. <a href=\"https://doi.org/10.1126/science.1190897\">https://doi.org/10.1126/science.1190897</a>","chicago":"Busskamp, Volker, Jens Duebel, Dávid Bálya, Mathias Fradot, Tim Viney, Sandra Siegert, Anna Groner, et al. “Genetic Reactivation of Cone Photoreceptors Restores Visual Responses in Retinitis Pigmentosa.” <i>Science</i>. American Association for the Advancement of Science, 2010. <a href=\"https://doi.org/10.1126/science.1190897\">https://doi.org/10.1126/science.1190897</a>.","mla":"Busskamp, Volker, et al. “Genetic Reactivation of Cone Photoreceptors Restores Visual Responses in Retinitis Pigmentosa.” <i>Science</i>, vol. 329, no. 5990, American Association for the Advancement of Science, 2010, pp. 413–17, doi:<a href=\"https://doi.org/10.1126/science.1190897\">10.1126/science.1190897</a>.","ieee":"V. Busskamp <i>et al.</i>, “Genetic reactivation of cone photoreceptors restores visual responses in retinitis pigmentosa,” <i>Science</i>, vol. 329, no. 5990. American Association for the Advancement of Science, pp. 413–417, 2010.","short":"V. Busskamp, J. Duebel, D. Bálya, M. Fradot, T. Viney, S. Siegert, A. Groner, E. Cabuy, V. Forster, M. Seeliger, M. Biel, P. Humphries, M. Pâques, S. Mohand Saïd, D. Trono, K. Deisseroth, J. Sähel, S. Picaud, B. Roska, Science 329 (2010) 413–417.","ama":"Busskamp V, Duebel J, Bálya D, et al. Genetic reactivation of cone photoreceptors restores visual responses in retinitis pigmentosa. <i>Science</i>. 2010;329(5990):413-417. doi:<a href=\"https://doi.org/10.1126/science.1190897\">10.1126/science.1190897</a>"},"intvolume":"       329"},{"publist_id":"5113","publication":"Nature","issue":"7297","author":[{"first_name":"Rouslan","full_name":"Efremov, Rouslan G","last_name":"Efremov"},{"last_name":"Baradaran","full_name":"Baradaran, Rozbeh ","first_name":"Rozbeh"},{"id":"338D39FE-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-0977-7989","first_name":"Leonid A","full_name":"Leonid Sazanov","last_name":"Sazanov"}],"date_published":"2010-05-27T00:00:00Z","acknowledgement":"This work was funded by the Medical Research Council.","title":"The architecture of respiratory complex I","publication_status":"published","type":"journal_article","_id":"1970","month":"05","doi":"10.1038/nature09066","publisher":"Nature Publishing Group","citation":{"apa":"Efremov, R., Baradaran, R., &#38; Sazanov, L. A. (2010). The architecture of respiratory complex I. <i>Nature</i>. Nature Publishing Group. <a href=\"https://doi.org/10.1038/nature09066\">https://doi.org/10.1038/nature09066</a>","chicago":"Efremov, Rouslan, Rozbeh Baradaran, and Leonid A Sazanov. “The Architecture of Respiratory Complex I.” <i>Nature</i>. Nature Publishing Group, 2010. <a href=\"https://doi.org/10.1038/nature09066\">https://doi.org/10.1038/nature09066</a>.","ista":"Efremov R, Baradaran R, Sazanov LA. 2010. The architecture of respiratory complex I. Nature. 465(7297), 441–445.","ieee":"R. Efremov, R. Baradaran, and L. A. Sazanov, “The architecture of respiratory complex I,” <i>Nature</i>, vol. 465, no. 7297. Nature Publishing Group, pp. 441–445, 2010.","mla":"Efremov, Rouslan, et al. “The Architecture of Respiratory Complex I.” <i>Nature</i>, vol. 465, no. 7297, Nature Publishing Group, 2010, pp. 441–45, doi:<a href=\"https://doi.org/10.1038/nature09066\">10.1038/nature09066</a>.","short":"R. Efremov, R. Baradaran, L.A. Sazanov, Nature 465 (2010) 441–445.","ama":"Efremov R, Baradaran R, Sazanov LA. The architecture of respiratory complex I. <i>Nature</i>. 2010;465(7297):441-445. doi:<a href=\"https://doi.org/10.1038/nature09066\">10.1038/nature09066</a>"},"intvolume":"       465","day":"27","status":"public","volume":465,"abstract":[{"text":"Complex I is the first enzyme of the respiratory chain and has a central role in cellular energy production, coupling electron transfer between NADH and quinone to proton translocation by an unknown mechanism. Dysfunction of complex I has been implicated in many human neurodegenerative diseases. We have determined the structure of its hydrophilic domain previously. Here, we report the α-helical structure of the membrane domain of complex I from Escherichia coli at 3.9 Å resolution. The antiporter-like subunits NuoL/M/N each contain 14 conserved transmembrane (TM) helices. Two of them are discontinuous, as in some transporters. Unexpectedly, subunit NuoL also contains a 110-Å long amphipathic α-helix, spanning almost the entire length of the domain. Furthermore, we have determined the structure of the entire complex I from Thermus thermophilus at 4.5 Å resolution. The L-shaped assembly consists of the α-helical model for the membrane domain, with 63 TM helices, and the known structure of the hydrophilic domain. The architecture of the complex provides strong clues about the coupling mechanism: the conformational changes at the interface of the two main domains may drive the long amphipathic α-helix of NuoL in a piston-like motion, tilting nearby discontinuous TM helices, resulting in proton translocation.","lang":"eng"}],"extern":1,"page":"441 - 445","quality_controlled":0,"date_created":"2018-12-11T11:54:58Z","year":"2010","date_updated":"2021-01-12T06:54:25Z"},{"date_created":"2023-08-01T09:48:11Z","year":"2010","page":"2247-2279","quality_controlled":"1","date_updated":"2023-08-08T07:58:13Z","volume":82,"article_processing_charge":"No","publication_identifier":{"issn":["0033-4545"],"eissn":["1365-3075"]},"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1351/pac-con-10-09-04"}],"scopus_import":"1","doi":"10.1351/pac-con-10-09-04","publisher":"De Gruyter","language":[{"iso":"eng"}],"type":"journal_article","oa_version":"Published Version","date_published":"2010-10-15T00:00:00Z","publication":"Pure and Applied Chemistry","issue":"12","author":[{"first_name":"Rafal","full_name":"Klajn, Rafal","last_name":"Klajn","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b"}],"status":"public","extern":"1","abstract":[{"lang":"eng","text":"The immobilization of molecular switches onto inorganic supports has recently become a hot topic as it can give rise to novel hybrid materials in which the properties of the two components are mutually enhanced. Even more attractive is the concept of “transferring” the switchable characteristics of single layers of organic molecules onto the underlying inorganic components, rendering them responsive to external stimuli as well. Of the various molecular switches studied, azobenzene (AB) has arguably attracted most attention due to its simple molecular structure, and because its “trigger” (light) is a noninvasive one, it can be delivered instantaneously, and into a precise location. In order to fully realize its potential, however, it is necessary to immobilize AB onto solid supports. It is the goal of this manuscript to comprehensively yet concisely review such hybrid systems which comprise AB forming well-defined self-assembled monolayers (SAMs) on planar and curved (colloidal and nanoporous) inorganic surfaces. I discuss methods to immobilize AB derivatives onto surfaces, strategies to ensure efficient AB isomerization, ways to monitor the switching process, properties of these switchable hybrid materials, and, last but not least, their emerging applications."}],"day":"15","keyword":["General Chemical Engineering","General Chemistry"],"citation":{"short":"R. Klajn, Pure and Applied Chemistry 82 (2010) 2247–2279.","ama":"Klajn R. Immobilized azobenzenes for the construction of photoresponsive materials. <i>Pure and Applied Chemistry</i>. 2010;82(12):2247-2279. doi:<a href=\"https://doi.org/10.1351/pac-con-10-09-04\">10.1351/pac-con-10-09-04</a>","ista":"Klajn R. 2010. Immobilized azobenzenes for the construction of photoresponsive materials. Pure and Applied Chemistry. 82(12), 2247–2279.","chicago":"Klajn, Rafal. “Immobilized Azobenzenes for the Construction of Photoresponsive Materials.” <i>Pure and Applied Chemistry</i>. De Gruyter, 2010. <a href=\"https://doi.org/10.1351/pac-con-10-09-04\">https://doi.org/10.1351/pac-con-10-09-04</a>.","apa":"Klajn, R. (2010). Immobilized azobenzenes for the construction of photoresponsive materials. <i>Pure and Applied Chemistry</i>. De Gruyter. <a href=\"https://doi.org/10.1351/pac-con-10-09-04\">https://doi.org/10.1351/pac-con-10-09-04</a>","mla":"Klajn, Rafal. “Immobilized Azobenzenes for the Construction of Photoresponsive Materials.” <i>Pure and Applied Chemistry</i>, vol. 82, no. 12, De Gruyter, 2010, pp. 2247–79, doi:<a href=\"https://doi.org/10.1351/pac-con-10-09-04\">10.1351/pac-con-10-09-04</a>.","ieee":"R. Klajn, “Immobilized azobenzenes for the construction of photoresponsive materials,” <i>Pure and Applied Chemistry</i>, vol. 82, no. 12. De Gruyter, pp. 2247–2279, 2010."},"intvolume":"        82","month":"10","_id":"13409","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_status":"published","title":"Immobilized azobenzenes for the construction of photoresponsive materials","oa":1,"article_type":"original"}]