@article{14795,
  abstract     = {Metazoan development relies on the formation and remodeling of cell-cell contacts. Dynamic reorganization of adhesion receptors and the actomyosin cell cortex in space and time plays a central role in cell-cell contact formation and maturation. Nevertheless, how this process is mechanistically achieved when new contacts are formed remains unclear. Here, by building a biomimetic assay composed of progenitor cells adhering to supported lipid bilayers functionalized with E-cadherin ectodomains, we show that cortical F-actin flows, driven by the depletion of myosin-2 at the cell contact center, mediate the dynamic reorganization of adhesion receptors and cell cortex at the contact. E-cadherin-dependent downregulation of the small GTPase RhoA at the forming contact leads to both a depletion of myosin-2 and a decrease of F-actin at the contact center. At the contact rim, in contrast, myosin-2 becomes enriched by the retraction of bleb-like protrusions, resulting in a cortical tension gradient from the contact rim to its center. This tension gradient, in turn, triggers centrifugal F-actin flows, leading to further accumulation of F-actin at the contact rim and the progressive redistribution of E-cadherin from the contact center to the rim. Eventually, this combination of actomyosin downregulation and flows at the contact determines the characteristic molecular organization, with E-cadherin and F-actin accumulating at the contact rim, where they are needed to mechanically link the contractile cortices of the adhering cells.},
  author       = {Arslan, Feyza N and Hannezo, Edouard B and Merrin, Jack and Loose, Martin and Heisenberg, Carl-Philipp J},
  issn         = {1879-0445},
  journal      = {Current Biology},
  number       = {1},
  pages        = {171--182.e8},
  publisher    = {Elsevier},
  title        = {{Adhesion-induced cortical flows pattern E-cadherin-mediated cell contacts}},
  doi          = {10.1016/j.cub.2023.11.067},
  volume       = {34},
  year         = {2024},
}

@article{15048,
  abstract     = {Embryogenesis results from the coordinated activities of different signaling pathways controlling cell fate specification and morphogenesis. In vertebrate gastrulation, both Nodal and BMP signaling play key roles in germ layer specification and morphogenesis, yet their interplay to coordinate embryo patterning with morphogenesis is still insufficiently understood. Here, we took a reductionist approach using zebrafish embryonic explants to study the coordination of Nodal and BMP signaling for embryo patterning and morphogenesis. We show that Nodal signaling triggers explant elongation by inducing mesendodermal progenitors but also suppressing BMP signaling activity at the site of mesendoderm induction. Consistent with this, ectopic BMP signaling in the mesendoderm blocks cell alignment and oriented mesendoderm intercalations, key processes during explant elongation. Translating these ex vivo observations to the intact embryo showed that, similar to explants, Nodal signaling suppresses the effect of BMP signaling on cell intercalations in the dorsal domain, thus allowing robust embryonic axis elongation. These findings suggest a dual function of Nodal signaling in embryonic axis elongation by both inducing mesendoderm and suppressing BMP effects in the dorsal portion of the mesendoderm.},
  author       = {Schauer, Alexandra and Pranjic-Ferscha, Kornelija and Hauschild, Robert and Heisenberg, Carl-Philipp J},
  issn         = {1477-9129},
  journal      = {Development},
  number       = {4},
  pages        = {1--18},
  publisher    = {The Company of Biologists},
  title        = {{Robust axis elongation by Nodal-dependent restriction of BMP signaling}},
  doi          = {10.1242/dev.202316},
  volume       = {151},
  year         = {2024},
}

@article{13229,
  abstract     = {Dynamic reorganization of the cytoplasm is key to many core cellular processes, such as cell division, cell migration, and cell polarization. Cytoskeletal rearrangements are thought to constitute the main drivers of cytoplasmic flows and reorganization. In contrast, remarkably little is known about how dynamic changes in size and shape of cell organelles affect cytoplasmic organization. Here, we show that within the maturing zebrafish oocyte, the surface localization of exocytosis-competent cortical granules (Cgs) upon germinal vesicle breakdown (GVBD) is achieved by the combined activities of yolk granule (Yg) fusion and microtubule aster formation and translocation. We find that Cgs are moved towards the oocyte surface through radially outward cytoplasmic flows induced by Ygs fusing and compacting towards the oocyte center in response to GVBD. We further show that vesicles decorated with the small Rab GTPase Rab11, a master regulator of vesicular trafficking and exocytosis, accumulate together with Cgs at the oocyte surface. This accumulation is achieved by Rab11-positive vesicles being transported by acentrosomal microtubule asters, the formation of which is induced by the release of CyclinB/Cdk1 upon GVBD, and which display a net movement towards the oocyte surface by preferentially binding to the oocyte actin cortex. We finally demonstrate that the decoration of Cgs by Rab11 at the oocyte surface is needed for Cg exocytosis and subsequent chorion elevation, a process central in egg activation. Collectively, these findings unravel a yet unrecognized role of organelle fusion, functioning together with cytoskeletal rearrangements, in orchestrating cytoplasmic organization during oocyte maturation.},
  author       = {Shamipour, Shayan and Hofmann, Laura and Steccari, Irene and Kardos, Roland and Heisenberg, Carl-Philipp J},
  issn         = {1545-7885},
  journal      = {PLoS Biology},
  number       = {6},
  pages        = {e3002146},
  publisher    = {Public Library of Science},
  title        = {{Yolk granule fusion and microtubule aster formation regulate cortical granule translocation and exocytosis in zebrafish oocytes}},
  doi          = {10.1371/journal.pbio.3002146},
  volume       = {21},
  year         = {2023},
}

@article{14082,
  abstract     = {Epithelial barrier function is commonly analyzed using transepithelial electrical resistance, which measures ion flux across a monolayer, or by adding traceable macromolecules and monitoring their passage across the monolayer. Although these methods measure changes in global barrier function, they lack the sensitivity needed to detect local or transient barrier breaches, and they do not reveal the location of barrier leaks. Therefore, we previously developed a method that we named the zinc-based ultrasensitive microscopic barrier assay (ZnUMBA), which overcomes these limitations, allowing for detection of local tight junction leaks with high spatiotemporal resolution. Here, we present expanded applications for ZnUMBA. ZnUMBA can be used in Xenopus embryos to measure the dynamics of barrier restoration and actin accumulation following laser injury. ZnUMBA can also be effectively utilized in developing zebrafish embryos as well as cultured monolayers of Madin–Darby canine kidney (MDCK) II epithelial cells. ZnUMBA is a powerful and flexible method that, with minimal optimization, can be applied to multiple systems to measure dynamic changes in barrier function with spatiotemporal precision.},
  author       = {Higashi, Tomohito and Stephenson, Rachel E. and Schwayer, Cornelia and Huljev, Karla and Higashi, Atsuko Y. and Heisenberg, Carl-Philipp J and Chiba, Hideki and Miller, Ann L.},
  issn         = {1477-9137},
  journal      = {Journal of Cell Science},
  number       = {15},
  publisher    = {The Company of Biologists},
  title        = {{ZnUMBA - a live imaging method to detect local barrier breaches}},
  doi          = {10.1242/jcs.260668},
  volume       = {136},
  year         = {2023},
}

@article{12830,
  abstract     = {Interstitial fluid (IF) accumulation between embryonic cells is thought to be important for embryo patterning and morphogenesis. Here, we identify a positive mechanical feedback loop between cell migration and IF relocalization and find that it promotes embryonic axis formation during zebrafish gastrulation. We show that anterior axial mesendoderm (prechordal plate [ppl]) cells, moving in between the yolk cell and deep cell tissue to extend the embryonic axis, compress the overlying deep cell layer, thereby causing IF to flow from the deep cell layer to the boundary between the yolk cell and the deep cell layer, directly ahead of the advancing ppl. This IF relocalization, in turn, facilitates ppl cell protrusion formation and migration by opening up the space into which the ppl moves and, thereby, the ability of the ppl to trigger IF relocalization by pushing against the overlying deep cell layer. Thus, embryonic axis formation relies on a hydraulic feedback loop between cell migration and IF relocalization.},
  author       = {Huljev, Karla and Shamipour, Shayan and Nunes Pinheiro, Diana C and Preusser, Friedrich and Steccari, Irene and Sommer, Christoph M and Naik, Suyash and Heisenberg, Carl-Philipp J},
  issn         = {1878-1551},
  journal      = {Developmental Cell},
  number       = {7},
  pages        = {582--596.e7},
  publisher    = {Elsevier},
  title        = {{A hydraulic feedback loop between mesendoderm cell migration and interstitial fluid relocalization promotes embryonic axis formation in zebrafish}},
  doi          = {10.1016/j.devcel.2023.02.016},
  volume       = {58},
  year         = {2023},
}

@phdthesis{12891,
  abstract     = {The tight spatiotemporal coordination of signaling activity determining embryo
patterning and the physical processes driving embryo morphogenesis renders
embryonic development robust, such that key developmental processes can unfold
relatively normally even outside of the full embryonic context. For instance, embryonic
stem cell cultures can recapitulate the hallmarks of gastrulation, i.e. break symmetry
leading to germ layer formation and morphogenesis, in a very reduced environment.
This leads to questions on specific contributions of embryo-specific features, such as
the presence of extraembryonic tissues, which are inherently involved in gastrulation
in the full embryonic context. To address this, we established zebrafish embryonic
explants without the extraembryonic yolk cell, an important player as a signaling
source and for morphogenesis during gastrulation, as a model of ex vivo development.
We found that dorsal-marginal determinants are required and sufficient in these
explants to form and pattern all three germ layers. However, formation of tissues,
which require the highest Nodal-signaling levels, is variable, demonstrating a
contribution of extraembryonic tissues for reaching peak Nodal signaling levels.
Blastoderm explants also undergo gastrulation-like axis elongation. We found that this
elongation movement shows hallmarks of oriented mesendoderm cell intercalations
typically associated with dorsal tissues in the intact embryo. These are disrupted by
uniform upregulation of BMP signaling activity and concomitant explant ventralization,
suggesting that tight spatial control of BMP signaling is a prerequisite for explant
morphogenesis. This control is achieved by Nodal signaling, which is critical for
effectively downregulating BMP signaling in the mesendoderm, highlighting that Nodal
signaling is not only directly required for mesendoderm cell fate specification and
morphogenesis, but also by maintaining low levels of BMP signaling at the dorsal side.
Collectively, we provide insights into the capacity and organization of signaling and
morphogenetic domains to recapitulate features of zebrafish gastrulation outside of
the full embryonic context.},
  author       = {Schauer, Alexandra},
  issn         = {2663 - 337X},
  pages        = {190},
  publisher    = {Institute of Science and Technology Austria},
  title        = {{Mesendoderm formation in zebrafish gastrulation: The role of extraembryonic tissues}},
  doi          = {10.15479/at:ista:12891},
  year         = {2023},
}

@article{10766,
  abstract     = {Tension of the actomyosin cell cortex plays a key role in determining cell–cell contact growth and size. The level of cortical tension outside of the cell–cell contact, when pulling at the contact edge, scales with the total size to which a cell–cell contact can grow [J.-L. Maître et al., Science 338, 253–256 (2012)]. Here, we show in zebrafish primary germ-layer progenitor cells that this monotonic relationship only applies to a narrow range of cortical tension increase and that above a critical threshold, contact size inversely scales with cortical tension. This switch from cortical tension increasing to decreasing progenitor cell–cell contact size is caused by cortical tension promoting E-cadherin anchoring to the actomyosin cytoskeleton, thereby increasing clustering and stability of E-cadherin at the contact. After tension-mediated E-cadherin stabilization at the contact exceeds a critical threshold level, the rate by which the contact expands in response to pulling forces from the cortex sharply drops, leading to smaller contacts at physiologically relevant timescales of contact formation. Thus, the activity of cortical tension in expanding cell–cell contact size is limited by tension-stabilizing E-cadherin–actin complexes at the contact.},
  author       = {Slovakova, Jana and Sikora, Mateusz K and Arslan, Feyza N and Caballero Mancebo, Silvia and Krens, Gabriel and Kaufmann, Walter and Merrin, Jack and Heisenberg, Carl-Philipp J},
  issn         = {10916490},
  journal      = {Proceedings of the National Academy of Sciences of the United States of America},
  number       = {8},
  publisher    = {Proceedings of the National Academy of Sciences},
  title        = {{Tension-dependent stabilization of E-cadherin limits cell-cell contact expansion in zebrafish germ-layer progenitor cells}},
  doi          = {10.1073/pnas.2122030119},
  volume       = {119},
  year         = {2022},
}

@article{12209,
  abstract     = {Embryo development requires biochemical signalling to generate patterns of cell fates and active mechanical forces to drive tissue shape changes. However, how these processes are coordinated, and how tissue patterning is preserved despite the cellular flows occurring during morphogenesis, remains poorly understood. Gastrulation is a crucial embryonic stage that involves both patterning and internalization of the mesendoderm germ layer tissue. Here we show that, in zebrafish embryos, a gradient in Nodal signalling orchestrates pattern-preserving internalization movements by triggering a motility-driven unjamming transition. In addition to its role as a morphogen determining embryo patterning, graded Nodal signalling mechanically subdivides the mesendoderm into a small fraction of highly protrusive leader cells, able to autonomously internalize via local unjamming, and less protrusive followers, which need to be pulled inwards by the leaders. The Nodal gradient further enforces a code of preferential adhesion coupling leaders to their immediate followers, resulting in a collective and ordered mode of internalization that preserves mesendoderm patterning. Integrating this dual mechanical role of Nodal signalling into minimal active particle simulations quantitatively predicts both physiological and experimentally perturbed internalization movements. This provides a quantitative framework for how a morphogen-encoded unjamming transition can bidirectionally couple tissue mechanics with patterning during complex three-dimensional morphogenesis.},
  author       = {Nunes Pinheiro, Diana C and Kardos, Roland and Hannezo, Edouard B and Heisenberg, Carl-Philipp J},
  issn         = {1745-2481},
  journal      = {Nature Physics},
  keywords     = {General Physics and Astronomy},
  number       = {12},
  pages        = {1482--1493},
  publisher    = {Springer Nature},
  title        = {{Morphogen gradient orchestrates pattern-preserving tissue morphogenesis via motility-driven unjamming}},
  doi          = {10.1038/s41567-022-01787-6},
  volume       = {18},
  year         = {2022},
}

@phdthesis{12368,
  abstract     = {Metazoan development relies on the formation and remodeling of cell-cell contacts. The 
binding of adhesion receptors and remodeling of the actomyosin cell cortex at cell-cell 
interaction sites have been implicated in cell-cell contact formation. Yet, how these two 
processes functionally interact to drive cell-cell contact expansion and strengthening 
remains unclear. Here, we study how primary germ layer progenitor cells from zebrafish 
bind to supported lipid bilayers (SLB) functionalized with E-cadherin ectodomains as an 
assay system for monitoring cell-cell contact formation at high spatiotemporal resolution. 
We show that cell-cell contact formation represents a two-tiered process: E-cadherinmediated downregulation of the small GTPase RhoA at the forming contact leads to both 
depletion of Myosin-2 and decrease of F-actin. This is followed by centrifugal actin 
network flows at the contact triggered by a sharp gradient of Myosin-2 at the rim of the 
contact zone, with Myosin-2 displaying higher cortical localization outside than inside of 
the contact. These centrifugal cortical actin flows, in turn, not only further dilute the actin 
network at the contact disc, but also lead to an accumulation of both F-actin and Ecadherin at the contact rim. Eventually, this combination of actomyosin downregulation 
and flows at the contact contribute to the characteristic molecular organization implicated 
in contact formation and maintenance: depletion of cortical actomyosin at the contact disc, 
driving contact expansion by lowering interfacial tension at the contact, and accumulation 
of both E-cadherin and F-actin at the contact rim, mechanically linking the contractile 
cortices of the adhering cells. Thus, using a biomimetic assay, we exemplify how 
adhesion signaling and cell mechanics function together to modulate the spatial 
organization of cell-cell contacts.},
  author       = {Arslan, Feyza N},
  isbn         = { 978-3-99078-025-1 },
  issn         = {2663-337X},
  pages        = {113},
  publisher    = {Institute of Science and Technology Austria},
  title        = {{Remodeling of E-cadherin-mediated contacts via cortical  flows}},
  doi          = {10.15479/at:ista:12153},
  year         = {2022},
}

@article{8966,
  abstract     = {During development, a single cell is transformed into a highly complex organism through progressive cell division, specification and rearrangement. An important prerequisite for the emergence of patterns within the developing organism is to establish asymmetries at various scales, ranging from individual cells to the entire embryo, eventually giving rise to the different body structures. This becomes especially apparent during gastrulation, when the earliest major lineage restriction events lead to the formation of the different germ layers. Traditionally, the unfolding of the developmental program from symmetry breaking to germ layer formation has been studied by dissecting the contributions of different signaling pathways and cellular rearrangements in the in vivo context of intact embryos. Recent efforts, using the intrinsic capacity of embryonic stem cells to self-assemble and generate embryo-like structures de novo, have opened new avenues for understanding the many ways by which an embryo can be built and the influence of extrinsic factors therein. Here, we discuss and compare divergent and conserved strategies leading to germ layer formation in embryos as compared to in vitro systems, their upstream molecular cascades and the role of extrinsic factors in this process.},
  author       = {Schauer, Alexandra and Heisenberg, Carl-Philipp J},
  issn         = {0012-1606},
  journal      = {Developmental Biology},
  keywords     = {Developmental Biology, Cell Biology, Molecular Biology},
  pages        = {71--81},
  publisher    = {Elsevier},
  title        = {{Reassembling gastrulation}},
  doi          = {10.1016/j.ydbio.2020.12.014},
  volume       = {474},
  year         = {2021},
}

@inbook{9245,
  abstract     = {Tissue morphogenesis is driven by mechanical forces triggering cell movements and shape changes. Quantitatively measuring tension within tissues is of great importance for understanding the role of mechanical signals acting on the cell and tissue level during morphogenesis. Here we introduce laser ablation as a useful tool to probe tissue tension within the granulosa layer, an epithelial monolayer of somatic cells that surround the zebrafish female gamete during folliculogenesis. We describe in detail how to isolate follicles, mount samples, perform laser surgery, and analyze the data.},
  author       = {Xia, Peng and Heisenberg, Carl-Philipp J},
  booktitle    = {Germline Development in the Zebrafish},
  editor       = {Dosch, Roland},
  isbn         = {978-1-0716-0969-9},
  issn         = {1940-6029},
  keywords     = {Tissue tension, Morphogenesis, Laser ablation, Zebrafish folliculogenesis, Granulosa cells},
  pages        = {117--128},
  publisher    = {Humana},
  title        = {{Quantifying tissue tension in the granulosa layer after laser surgery}},
  doi          = {10.1007/978-1-0716-0970-5_10},
  volume       = {2218},
  year         = {2021},
}

@article{9316,
  abstract     = {Embryo morphogenesis is impacted by dynamic changes in tissue material properties, which have been proposed to occur via processes akin to phase transitions (PTs). Here, we show that rigidity percolation provides a simple and robust theoretical framework to predict material/structural PTs of embryonic tissues from local cell connectivity. By using percolation theory, combined with directly monitoring dynamic changes in tissue rheology and cell contact mechanics, we demonstrate that the zebrafish blastoderm undergoes a genuine rigidity PT, brought about by a small reduction in adhesion-dependent cell connectivity below a critical value. We quantitatively predict and experimentally verify hallmarks of PTs, including power-law exponents and associated discontinuities of macroscopic observables. Finally, we show that this uniform PT depends on blastoderm cells undergoing meta-synchronous divisions causing random and, consequently, uniform changes in cell connectivity. Collectively, our theoretical and experimental findings reveal the structural basis of material PTs in an organismal context.},
  author       = {Petridou, Nicoletta and Corominas-Murtra, Bernat and Heisenberg, Carl-Philipp J and Hannezo, Edouard B},
  issn         = {10974172},
  journal      = {Cell},
  number       = {7},
  pages        = {1914--1928.e19},
  publisher    = {Elsevier},
  title        = {{Rigidity percolation uncovers a structural basis for embryonic tissue phase transitions}},
  doi          = {10.1016/j.cell.2021.02.017},
  volume       = {184},
  year         = {2021},
}

@article{9999,
  abstract     = {The developmental strategies used by progenitor cells to endure a safe journey from their induction place towards the site of terminal differentiation are still poorly understood. Here we uncovered a progenitor cell allocation mechanism that stems from an incomplete process of epithelial delamination that allows progenitors to coordinate their movement with adjacent extra-embryonic tissues. Progenitors of the zebrafish laterality organ originate from the surface epithelial enveloping layer by an apical constriction process of cell delamination. During this process, progenitors retain long-term apical contacts that enable the epithelial layer to pull a subset of progenitors along their way towards the vegetal pole. The remaining delaminated progenitors follow apically-attached progenitors’ movement by a co-attraction mechanism, avoiding sequestration by the adjacent endoderm, ensuring their fate and collective allocation at the differentiation site. Thus, we reveal that incomplete delamination serves as a cellular platform for coordinated tissue movements during development. Impact Statement: Incomplete delamination serves as a cellular platform for coordinated tissue movements during development, guiding newly formed progenitor cell groups to the differentiation site.},
  author       = {Pulgar, Eduardo and Schwayer, Cornelia and Guerrero, Néstor and López, Loreto and Márquez, Susana and Härtel, Steffen and Soto, Rodrigo and Heisenberg, Carl Philipp and Concha, Miguel L.},
  issn         = {2050-084X},
  journal      = {eLife},
  keywords     = {cell delamination, apical constriction, dragging, mechanical forces, collective 18 locomotion, dorsal forerunner cells, zebrafish},
  publisher    = {eLife Sciences Publications},
  title        = {{Apical contacts stemming from incomplete delamination guide progenitor cell allocation through a dragging mechanism}},
  doi          = {10.7554/eLife.66483},
  volume       = {10},
  year         = {2021},
}

@article{7888,
  abstract     = {Embryonic stem cell cultures are thought to self-organize into embryoid bodies, able to undergo symmetry-breaking, germ layer specification and even morphogenesis. Yet, it is unclear how to reconcile this remarkable self-organization capacity with classical experiments demonstrating key roles for extrinsic biases by maternal factors and/or extraembryonic tissues in embryogenesis. Here, we show that zebrafish embryonic tissue explants, prepared prior to germ layer induction and lacking extraembryonic tissues, can specify all germ layers and form a seemingly complete mesendoderm anlage. Importantly, explant organization requires polarized inheritance of maternal factors from dorsal-marginal regions of the blastoderm. Moreover, induction of endoderm and head-mesoderm, which require peak Nodal-signaling levels, is highly variable in explants, reminiscent of embryos with reduced Nodal signals from the extraembryonic tissues. Together, these data suggest that zebrafish explants do not undergo bona fide self-organization, but rather display features of genetically encoded self-assembly, where intrinsic genetic programs control the emergence of order.},
  author       = {Schauer, Alexandra and Nunes Pinheiro, Diana C and Hauschild, Robert and Heisenberg, Carl-Philipp J},
  issn         = {2050-084X},
  journal      = {eLife},
  publisher    = {eLife Sciences Publications},
  title        = {{Zebrafish embryonic explants undergo genetically encoded self-assembly}},
  doi          = {10.7554/elife.55190},
  volume       = {9},
  year         = {2020},
}

@article{8680,
  abstract     = {Animal development entails the organization of specific cell types in space and time, and spatial patterns must form in a robust manner. In the zebrafish spinal cord, neural progenitors form stereotypic patterns despite noisy morphogen signaling and large-scale cellular rearrangements during morphogenesis and growth. By directly measuring adhesion forces and preferences for three types of endogenous neural progenitors, we provide evidence for the differential adhesion model in which differences in intercellular adhesion mediate cell sorting. Cell type–specific combinatorial expression of different classes of cadherins (N-cadherin, cadherin 11, and protocadherin 19) results in homotypic preference ex vivo and patterning robustness in vivo. Furthermore, the differential adhesion code is regulated by the sonic hedgehog morphogen gradient. We propose that robust patterning during tissue morphogenesis results from interplay between adhesion-based self-organization and morphogen-directed patterning.},
  author       = {Tsai, Tony Y.-C. and Sikora, Mateusz K and Xia, Peng and Colak-Champollion, Tugba and Knaut, Holger and Heisenberg, Carl-Philipp J and Megason, Sean G.},
  issn         = {1095-9203},
  journal      = {Science},
  keywords     = {Multidisciplinary},
  number       = {6512},
  pages        = {113--116},
  publisher    = {American Association for the Advancement of Science},
  title        = {{An adhesion code ensures robust pattern formation during tissue morphogenesis}},
  doi          = {10.1126/science.aba6637},
  volume       = {370},
  year         = {2020},
}

@inbook{7227,
  abstract     = {Gastrulation entails specification and formation of three embryonic germ layers—ectoderm, mesoderm and endoderm—thereby establishing the basis for the future body plan. In zebrafish embryos, germ layer specification occurs during blastula and early gastrula stages (Ho & Kimmel, 1993), a period when the main morphogenetic movements underlying gastrulation are initiated. Hence, the signals driving progenitor cell fate specification, such as Nodal ligands from the TGF-β family, also play key roles in regulating germ layer progenitor cell segregation (Carmany-Rampey & Schier, 2001; David & Rosa, 2001; Feldman et al., 2000; Gritsman et al., 1999; Keller et al., 2008). In this review, we summarize and discuss the main signaling pathways involved in germ layer progenitor cell fate specification and segregation, specifically focusing on recent advances in understanding the interplay between mesoderm and endoderm specification and the internalization movements at the onset of zebrafish gastrulation.},
  author       = {Nunes Pinheiro, Diana C and Heisenberg, Carl-Philipp J},
  booktitle    = {Gastrulation: From Embryonic Pattern to Form},
  issn         = {00702153},
  pages        = {343--375},
  publisher    = {Elsevier},
  title        = {{Zebrafish gastrulation: Putting fate in motion}},
  doi          = {10.1016/bs.ctdb.2019.10.009},
  volume       = {136},
  year         = {2020},
}

@unpublished{9750,
  abstract     = {Tension of the actomyosin cell cortex plays a key role in determining cell-cell contact growth and size. The level of cortical tension outside of the cell-cell contact, when pulling at the contact edge, scales with the total size to which a cell-cell contact can grow1,2. Here we show in zebrafish primary germ layer progenitor cells that this monotonic relationship only applies to a narrow range of cortical tension increase, and that above a critical threshold, contact size inversely scales with cortical tension. This switch from cortical tension increasing to decreasing progenitor cell-cell contact size is caused by cortical tension promoting E-cadherin anchoring to the actomyosin cytoskeleton, thereby increasing clustering and stability of E-cadherin at the contact. Once tension-mediated E-cadherin stabilization at the contact exceeds a critical threshold level, the rate by which the contact expands in response to pulling forces from the cortex sharply drops, leading to smaller contacts at physiologically relevant timescales of contact formation. Thus, the activity of cortical tension in expanding cell-cell contact size is limited by tension stabilizing E-cadherin-actin complexes at the contact.},
  author       = {Slovakova, Jana and Sikora, Mateusz K and Caballero Mancebo, Silvia and Krens, Gabriel and Kaufmann, Walter and Huljev, Karla and Heisenberg, Carl-Philipp J},
  booktitle    = {bioRxiv},
  pages        = {41},
  publisher    = {Cold Spring Harbor Laboratory},
  title        = {{Tension-dependent stabilization of E-cadherin limits cell-cell contact expansion}},
  doi          = {10.1101/2020.11.20.391284},
  year         = {2020},
}

@article{6980,
  abstract     = {Tissue morphogenesis in multicellular organisms is brought about by spatiotemporal coordination of mechanical and chemical signals. Extensive work on how mechanical forces together with the well‐established morphogen signalling pathways can actively shape living tissues has revealed evolutionary conserved mechanochemical features of embryonic development. More recently, attention has been drawn to the description of tissue material properties and how they can influence certain morphogenetic processes. Interestingly, besides the role of tissue material properties in determining how much tissues deform in response to force application, there is increasing theoretical and experimental evidence, suggesting that tissue material properties can abruptly and drastically change in development. These changes resemble phase transitions, pointing at the intriguing possibility that important morphogenetic processes in development, such as symmetry breaking and self‐organization, might be mediated by tissue phase transitions. In this review, we summarize recent findings on the regulation and role of tissue material properties in the context of the developing embryo. We posit that abrupt changes of tissue rheological properties may have important implications in maintaining the balance between robustness and adaptability during embryonic development.},
  author       = {Petridou, Nicoletta and Heisenberg, Carl-Philipp J},
  issn         = {1460-2075},
  journal      = {The EMBO Journal},
  number       = {20},
  publisher    = {EMBO},
  title        = {{Tissue rheology in embryonic organization}},
  doi          = {10.15252/embj.2019102497},
  volume       = {38},
  year         = {2019},
}

@article{7001,
  author       = {Schwayer, Cornelia and Shamipour, Shayan and Pranjic-Ferscha, Kornelija and Schauer, Alexandra and Balda, M and Tada, M and Matter, K and Heisenberg, Carl-Philipp J},
  issn         = {1097-4172},
  journal      = {Cell},
  number       = {4},
  pages        = {937--952.e18},
  publisher    = {Cell Press},
  title        = {{Mechanosensation of tight junctions depends on ZO-1 phase separation and flow}},
  doi          = {10.1016/j.cell.2019.10.006},
  volume       = {179},
  year         = {2019},
}

@article{5789,
  abstract     = {Tissue morphogenesis is driven by mechanical forces that elicit changes in cell size, shape and motion. The extent by which forces deform tissues critically depends on the rheological properties of the recipient tissue. Yet, whether and how dynamic changes in tissue rheology affect tissue morphogenesis and how they are regulated within the developing organism remain unclear. Here, we show that blastoderm spreading at the onset of zebrafish morphogenesis relies on a rapid, pronounced and spatially patterned tissue fluidization. Blastoderm fluidization is temporally controlled by mitotic cell rounding-dependent cell–cell contact disassembly during the last rounds of cell cleavages. Moreover, fluidization is spatially restricted to the central blastoderm by local activation of non-canonical Wnt signalling within the blastoderm margin, increasing cell cohesion and thereby counteracting the effect of mitotic rounding on contact disassembly. Overall, our results identify a fluidity transition mediated by loss of cell cohesion as a critical regulator of embryo morphogenesis.},
  author       = {Petridou, Nicoletta and Grigolon, Silvia and Salbreux, Guillaume and Hannezo, Edouard B and Heisenberg, Carl-Philipp J},
  issn         = {14657392},
  journal      = {Nature Cell Biology},
  pages        = {169–178},
  publisher    = {Nature Publishing Group},
  title        = {{Fluidization-mediated tissue spreading by mitotic cell rounding and non-canonical Wnt signalling}},
  doi          = {10.1038/s41556-018-0247-4},
  volume       = {21},
  year         = {2019},
}

