---
_id: '14360'
abstract:
- lang: eng
  text: To navigate through diverse tissues, migrating cells must balance persistent
    self-propelled motion with adaptive behaviors to circumvent obstacles. We identify
    a curvature-sensing mechanism underlying obstacle evasion in immune-like cells.
    Specifically, we propose that actin polymerization at the advancing edge of migrating
    cells is inhibited by the curvature-sensitive BAR domain protein Snx33 in regions
    with inward plasma membrane curvature. The genetic perturbation of this machinery
    reduces the cells’ capacity to evade obstructions combined with faster and more
    persistent cell migration in obstacle-free environments. Our results show how
    cells can read out their surface topography and utilize actin and plasma membrane
    biophysics to interpret their environment, allowing them to adaptively decide
    if they should move ahead or turn away. On the basis of our findings, we propose
    that the natural diversity of BAR domain proteins may allow cells to tune their
    curvature sensing machinery to match the shape characteristics in their environment.
acknowledgement: "We thank Jan Ellenberg, Leanne Strauss, Anusha Gopalan, and Jia
  Hui Li for critical feedback on the manuscript and the Life Science Editors for
  editing assistance. The plasmid with hSnx33 was a kind gift from Duanqing Pei. Cell
  line with GFP-tagged IRSp53 was a kind gift from Orion Weiner. We thank Brian Graziano
  for providing protocols, reagents, and key advice to generate CRISPR knockout HL-60
  cells. We thank the EMBL flow cytometry core facility, the EMBL advanced light microscopy
  facility, the EMBL proteomics facility, and the EMBL genomics core facility for
  support and advice. We thank Anusha Gopalan and Martin Bergert for their support
  during mechanical measurements by AFM. We thank Estela Sosa Osorio for technical
  assistance for the co-immunoprecipitation. We thank the EMBL genome biology computational
  support (and specially Charles Girardot and Jelle Scholtalbers) for critical assistance
  during RNAseq analysis. We thank Hans Kristian Hannibal‐Bach for his technical assistance
  during the lipidomic analysis of plasma membrane isolates. We thank Steffen Burgold
  for their support with LLS7 microscope in the ZEISS Microscopy Customer Center Europe.
  We acknowledge the financial support of the European Molecular Biology Laboratory
  (EMBL) to A.D.-M., Y.S., A.K., and A.E., the EMBL Interdisciplinary Postdocs (EIPOD)
  program under Marie Sklodowska-Curie COFUND actions MSCA-COFUND-FP to M.S.B. and
  M. S. (grant agreement number: 847543), the BEST program funding by FCT (SFRH/BEST/150300/2019)
  to S.D.A. and the Joachim Herz Stiftung Add-on Fellowship for Interdisciplinary
  Science to E.S.\r\nOpen Access funding enabled and organized by Projekt DEAL."
article_number: '5644'
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Ewa
  full_name: Sitarska, Ewa
  last_name: Sitarska
- first_name: Silvia Dias
  full_name: Almeida, Silvia Dias
  last_name: Almeida
- first_name: Marianne Sandvold
  full_name: Beckwith, Marianne Sandvold
  last_name: Beckwith
- first_name: Julian A
  full_name: Stopp, Julian A
  id: 489E3F00-F248-11E8-B48F-1D18A9856A87
  last_name: Stopp
- first_name: Jakub
  full_name: Czuchnowski, Jakub
  last_name: Czuchnowski
- first_name: Marc
  full_name: Siggel, Marc
  last_name: Siggel
- first_name: Rita
  full_name: Roessner, Rita
  last_name: Roessner
- first_name: Aline
  full_name: Tschanz, Aline
  last_name: Tschanz
- first_name: Christer
  full_name: Ejsing, Christer
  last_name: Ejsing
- first_name: Yannick
  full_name: Schwab, Yannick
  last_name: Schwab
- first_name: Jan
  full_name: Kosinski, Jan
  last_name: Kosinski
- first_name: Michael K
  full_name: Sixt, Michael K
  id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87
  last_name: Sixt
  orcid: 0000-0002-6620-9179
- first_name: Anna
  full_name: Kreshuk, Anna
  last_name: Kreshuk
- first_name: Anna
  full_name: Erzberger, Anna
  last_name: Erzberger
- first_name: Alba
  full_name: Diz-Muñoz, Alba
  last_name: Diz-Muñoz
citation:
  ama: Sitarska E, Almeida SD, Beckwith MS, et al. Sensing their plasma membrane curvature
    allows migrating cells to circumvent obstacles. <i>Nature Communications</i>.
    2023;14. doi:<a href="https://doi.org/10.1038/s41467-023-41173-1">10.1038/s41467-023-41173-1</a>
  apa: Sitarska, E., Almeida, S. D., Beckwith, M. S., Stopp, J. A., Czuchnowski, J.,
    Siggel, M., … Diz-Muñoz, A. (2023). Sensing their plasma membrane curvature allows
    migrating cells to circumvent obstacles. <i>Nature Communications</i>. Springer
    Nature. <a href="https://doi.org/10.1038/s41467-023-41173-1">https://doi.org/10.1038/s41467-023-41173-1</a>
  chicago: Sitarska, Ewa, Silvia Dias Almeida, Marianne Sandvold Beckwith, Julian
    A Stopp, Jakub Czuchnowski, Marc Siggel, Rita Roessner, et al. “Sensing Their
    Plasma Membrane Curvature Allows Migrating Cells to Circumvent Obstacles.” <i>Nature
    Communications</i>. Springer Nature, 2023. <a href="https://doi.org/10.1038/s41467-023-41173-1">https://doi.org/10.1038/s41467-023-41173-1</a>.
  ieee: E. Sitarska <i>et al.</i>, “Sensing their plasma membrane curvature allows
    migrating cells to circumvent obstacles,” <i>Nature Communications</i>, vol. 14.
    Springer Nature, 2023.
  ista: Sitarska E, Almeida SD, Beckwith MS, Stopp JA, Czuchnowski J, Siggel M, Roessner
    R, Tschanz A, Ejsing C, Schwab Y, Kosinski J, Sixt MK, Kreshuk A, Erzberger A,
    Diz-Muñoz A. 2023. Sensing their plasma membrane curvature allows migrating cells
    to circumvent obstacles. Nature Communications. 14, 5644.
  mla: Sitarska, Ewa, et al. “Sensing Their Plasma Membrane Curvature Allows Migrating
    Cells to Circumvent Obstacles.” <i>Nature Communications</i>, vol. 14, 5644, Springer
    Nature, 2023, doi:<a href="https://doi.org/10.1038/s41467-023-41173-1">10.1038/s41467-023-41173-1</a>.
  short: E. Sitarska, S.D. Almeida, M.S. Beckwith, J.A. Stopp, J. Czuchnowski, M.
    Siggel, R. Roessner, A. Tschanz, C. Ejsing, Y. Schwab, J. Kosinski, M.K. Sixt,
    A. Kreshuk, A. Erzberger, A. Diz-Muñoz, Nature Communications 14 (2023).
date_created: 2023-09-24T22:01:10Z
date_published: 2023-09-13T00:00:00Z
date_updated: 2023-12-21T14:30:01Z
day: '13'
ddc:
- '570'
department:
- _id: MiSi
doi: 10.1038/s41467-023-41173-1
external_id:
  isi:
  - '001087583700008'
  pmid:
  - '37704612'
file:
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status: public
title: Sensing their plasma membrane curvature allows migrating cells to circumvent
  obstacles
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 14
year: '2023'
...
---
_id: '14697'
acknowledged_ssus:
- _id: LifeSc
- _id: Bio
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Julian A
  full_name: Stopp, Julian A
  id: 489E3F00-F248-11E8-B48F-1D18A9856A87
  last_name: Stopp
citation:
  ama: 'Stopp JA. Neutrophils on the hunt: Migratory strategies employed by neutrophils
    to fulfill their effector function. 2023. doi:<a href="https://doi.org/10.15479/at:ista:14697">10.15479/at:ista:14697</a>'
  apa: 'Stopp, J. A. (2023). <i>Neutrophils on the hunt: Migratory strategies employed
    by neutrophils to fulfill their effector function</i>. Institute of Science and
    Technology Austria. <a href="https://doi.org/10.15479/at:ista:14697">https://doi.org/10.15479/at:ista:14697</a>'
  chicago: 'Stopp, Julian A. “Neutrophils on the Hunt: Migratory Strategies Employed
    by Neutrophils to Fulfill Their Effector Function.” Institute of Science and Technology
    Austria, 2023. <a href="https://doi.org/10.15479/at:ista:14697">https://doi.org/10.15479/at:ista:14697</a>.'
  ieee: 'J. A. Stopp, “Neutrophils on the hunt: Migratory strategies employed by neutrophils
    to fulfill their effector function,” Institute of Science and Technology Austria,
    2023.'
  ista: 'Stopp JA. 2023. Neutrophils on the hunt: Migratory strategies employed by
    neutrophils to fulfill their effector function. Institute of Science and Technology
    Austria.'
  mla: 'Stopp, Julian A. <i>Neutrophils on the Hunt: Migratory Strategies Employed
    by Neutrophils to Fulfill Their Effector Function</i>. Institute of Science and
    Technology Austria, 2023, doi:<a href="https://doi.org/10.15479/at:ista:14697">10.15479/at:ista:14697</a>.'
  short: 'J.A. Stopp, Neutrophils on the Hunt: Migratory Strategies Employed by Neutrophils
    to Fulfill Their Effector Function, Institute of Science and Technology Austria,
    2023.'
date_created: 2023-12-18T19:14:28Z
date_published: 2023-12-20T00:00:00Z
date_updated: 2023-12-21T14:30:02Z
day: '20'
ddc:
- '570'
degree_awarded: PhD
department:
- _id: GradSch
- _id: MiSi
doi: 10.15479/at:ista:14697
ec_funded: 1
file:
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language:
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month: '12'
oa_version: Published Version
page: '226'
project:
- _id: 2564DBCA-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '665385'
  name: International IST Doctoral Program
publication_identifier:
  isbn:
  - 978-3-99078-038-1
  issn:
  - 2663 - 337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '6328'
    relation: part_of_dissertation
    status: public
  - id: '7885'
    relation: part_of_dissertation
    status: public
  - id: '12272'
    relation: part_of_dissertation
    status: public
  - id: '14274'
    relation: part_of_dissertation
    status: public
  - id: '14360'
    relation: part_of_dissertation
    status: public
status: public
supervisor:
- first_name: Michael K
  full_name: Sixt, Michael K
  id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87
  last_name: Sixt
  orcid: 0000-0002-6620-9179
title: 'Neutrophils on the hunt: Migratory strategies employed by neutrophils to fulfill
  their effector function'
type: dissertation
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
year: '2023'
...
---
_id: '14274'
abstract:
- lang: eng
  text: Immune responses rely on the rapid and coordinated migration of leukocytes.
    Whereas it is well established that single-cell migration is often guided by gradients
    of chemokines and other chemoattractants, it remains poorly understood how these
    gradients are generated, maintained, and modulated. By combining experimental
    data with theory on leukocyte chemotaxis guided by the G protein–coupled receptor
    (GPCR) CCR7, we demonstrate that in addition to its role as the sensory receptor
    that steers migration, CCR7 also acts as a generator and a modulator of chemotactic
    gradients. Upon exposure to the CCR7 ligand CCL19, dendritic cells (DCs) effectively
    internalize the receptor and ligand as part of the canonical GPCR desensitization
    response. We show that CCR7 internalization also acts as an effective sink for
    the chemoattractant, dynamically shaping the spatiotemporal distribution of the
    chemokine. This mechanism drives complex collective migration patterns, enabling
    DCs to create or sharpen chemotactic gradients. We further show that these self-generated
    gradients can sustain the long-range guidance of DCs, adapt collective migration
    patterns to the size and geometry of the environment, and provide a guidance cue
    for other comigrating cells. Such a dual role of CCR7 as a GPCR that both senses
    and consumes its ligand can thus provide a novel mode of cellular self-organization.
acknowledgement: "We thank I. de Vries and the Scientific Service Units (Life Sciences,
  Bioimaging, Nanofabrication, Preclinical and Miba Machine Shop) of the Institute
  of Science and Technology Austria for excellent support, as well as all the rotation
  students assisting in the laboratory work (B. Zens, H. Schön, and D. Babic).\r\nThis
  work was supported by grants from the European Research Council under the European
  Union’s Horizon 2020 research to M.S. (grant agreement no. 724373) and to E.H. (grant
  agreement no. 851288), and a grant by the Austrian Science Fund (DK Nanocell W1250-B20)
  to M.S. J.A. was supported by the Jenny and Antti Wihuri Foundation and Research
  Council of Finland's Flagship Programme InFLAMES (decision number: 357910). M.C.U.
  was supported by the European Union’s Horizon 2020 research and innovation programme
  under the Marie Skłodowska-Curie grant agreement no. 754411."
article_number: adc9584
article_processing_charge: No
article_type: original
author:
- first_name: Jonna H
  full_name: Alanko, Jonna H
  id: 2CC12E8C-F248-11E8-B48F-1D18A9856A87
  last_name: Alanko
  orcid: 0000-0002-7698-3061
- first_name: Mehmet C
  full_name: Ucar, Mehmet C
  id: 50B2A802-6007-11E9-A42B-EB23E6697425
  last_name: Ucar
  orcid: 0000-0003-0506-4217
- first_name: Nikola
  full_name: Canigova, Nikola
  id: 3795523E-F248-11E8-B48F-1D18A9856A87
  last_name: Canigova
  orcid: 0000-0002-8518-5926
- first_name: Julian A
  full_name: Stopp, Julian A
  id: 489E3F00-F248-11E8-B48F-1D18A9856A87
  last_name: Stopp
- first_name: Jan
  full_name: Schwarz, Jan
  id: 346C1EC6-F248-11E8-B48F-1D18A9856A87
  last_name: Schwarz
- first_name: Jack
  full_name: Merrin, Jack
  id: 4515C308-F248-11E8-B48F-1D18A9856A87
  last_name: Merrin
  orcid: 0000-0001-5145-4609
- first_name: Edouard B
  full_name: Hannezo, Edouard B
  id: 3A9DB764-F248-11E8-B48F-1D18A9856A87
  last_name: Hannezo
  orcid: 0000-0001-6005-1561
- first_name: Michael K
  full_name: Sixt, Michael K
  id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87
  last_name: Sixt
  orcid: 0000-0002-6620-9179
citation:
  ama: Alanko JH, Ucar MC, Canigova N, et al. CCR7 acts as both a sensor and a sink
    for CCL19 to coordinate collective leukocyte migration. <i>Science Immunology</i>.
    2023;8(87). doi:<a href="https://doi.org/10.1126/sciimmunol.adc9584">10.1126/sciimmunol.adc9584</a>
  apa: Alanko, J. H., Ucar, M. C., Canigova, N., Stopp, J. A., Schwarz, J., Merrin,
    J., … Sixt, M. K. (2023). CCR7 acts as both a sensor and a sink for CCL19 to coordinate
    collective leukocyte migration. <i>Science Immunology</i>. American Association
    for the Advancement of Science. <a href="https://doi.org/10.1126/sciimmunol.adc9584">https://doi.org/10.1126/sciimmunol.adc9584</a>
  chicago: Alanko, Jonna H, Mehmet C Ucar, Nikola Canigova, Julian A Stopp, Jan Schwarz,
    Jack Merrin, Edouard B Hannezo, and Michael K Sixt. “CCR7 Acts as Both a Sensor
    and a Sink for CCL19 to Coordinate Collective Leukocyte Migration.” <i>Science
    Immunology</i>. American Association for the Advancement of Science, 2023. <a
    href="https://doi.org/10.1126/sciimmunol.adc9584">https://doi.org/10.1126/sciimmunol.adc9584</a>.
  ieee: J. H. Alanko <i>et al.</i>, “CCR7 acts as both a sensor and a sink for CCL19
    to coordinate collective leukocyte migration,” <i>Science Immunology</i>, vol.
    8, no. 87. American Association for the Advancement of Science, 2023.
  ista: Alanko JH, Ucar MC, Canigova N, Stopp JA, Schwarz J, Merrin J, Hannezo EB,
    Sixt MK. 2023. CCR7 acts as both a sensor and a sink for CCL19 to coordinate collective
    leukocyte migration. Science Immunology. 8(87), adc9584.
  mla: Alanko, Jonna H., et al. “CCR7 Acts as Both a Sensor and a Sink for CCL19 to
    Coordinate Collective Leukocyte Migration.” <i>Science Immunology</i>, vol. 8,
    no. 87, adc9584, American Association for the Advancement of Science, 2023, doi:<a
    href="https://doi.org/10.1126/sciimmunol.adc9584">10.1126/sciimmunol.adc9584</a>.
  short: J.H. Alanko, M.C. Ucar, N. Canigova, J.A. Stopp, J. Schwarz, J. Merrin, E.B.
    Hannezo, M.K. Sixt, Science Immunology 8 (2023).
date_created: 2023-09-06T08:07:51Z
date_published: 2023-09-01T00:00:00Z
date_updated: 2023-12-21T14:30:01Z
day: '01'
department:
- _id: MiSi
- _id: EdHa
- _id: NanoFab
doi: 10.1126/sciimmunol.adc9584
ec_funded: 1
external_id:
  isi:
  - '001062110600003'
  pmid:
  - '37656776'
intvolume: '         8'
isi: 1
issue: '87'
keyword:
- General Medicine
- Immunology
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1126/sciimmunol.adc9584
month: '09'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 25FE9508-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '724373'
  name: Cellular navigation along spatial gradients
- _id: 05943252-7A3F-11EA-A408-12923DDC885E
  call_identifier: H2020
  grant_number: '851288'
  name: Design Principles of Branching Morphogenesis
- _id: 265E2996-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: W01250-B20
  name: Nano-Analytics of Cellular Systems
- _id: 260C2330-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '754411'
  name: ISTplus - Postdoctoral Fellowships
publication: Science Immunology
publication_identifier:
  issn:
  - 2470-9468
publication_status: published
publisher: American Association for the Advancement of Science
quality_controlled: '1'
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  - id: '14697'
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scopus_import: '1'
status: public
title: CCR7 acts as both a sensor and a sink for CCL19 to coordinate collective leukocyte
  migration
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8
year: '2023'
...
---
_id: '12272'
abstract:
- lang: eng
  text: Reading, interpreting and crawling along gradients of chemotactic cues is
    one of the most complex questions in cell biology. In this issue, Georgantzoglou
    et al. (2022. J. Cell. Biol.https://doi.org/10.1083/jcb.202103207) use in vivo
    models to map the temporal sequence of how neutrophils respond to an acutely arising
    gradient of chemoattractant.
article_number: e202206127
article_processing_charge: No
article_type: original
author:
- first_name: Julian A
  full_name: Stopp, Julian A
  id: 489E3F00-F248-11E8-B48F-1D18A9856A87
  last_name: Stopp
- first_name: Michael K
  full_name: Sixt, Michael K
  id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87
  last_name: Sixt
  orcid: 0000-0002-6620-9179
citation:
  ama: 'Stopp JA, Sixt MK. Plan your trip before you leave: The neutrophils’ search-and-run
    journey. <i>Journal of Cell Biology</i>. 2022;221(8). doi:<a href="https://doi.org/10.1083/jcb.202206127">10.1083/jcb.202206127</a>'
  apa: 'Stopp, J. A., &#38; Sixt, M. K. (2022). Plan your trip before you leave: The
    neutrophils’ search-and-run journey. <i>Journal of Cell Biology</i>. Rockefeller
    University Press. <a href="https://doi.org/10.1083/jcb.202206127">https://doi.org/10.1083/jcb.202206127</a>'
  chicago: 'Stopp, Julian A, and Michael K Sixt. “Plan Your Trip before You Leave:
    The Neutrophils’ Search-and-Run Journey.” <i>Journal of Cell Biology</i>. Rockefeller
    University Press, 2022. <a href="https://doi.org/10.1083/jcb.202206127">https://doi.org/10.1083/jcb.202206127</a>.'
  ieee: 'J. A. Stopp and M. K. Sixt, “Plan your trip before you leave: The neutrophils’
    search-and-run journey,” <i>Journal of Cell Biology</i>, vol. 221, no. 8. Rockefeller
    University Press, 2022.'
  ista: 'Stopp JA, Sixt MK. 2022. Plan your trip before you leave: The neutrophils’
    search-and-run journey. Journal of Cell Biology. 221(8), e202206127.'
  mla: 'Stopp, Julian A., and Michael K. Sixt. “Plan Your Trip before You Leave: The
    Neutrophils’ Search-and-Run Journey.” <i>Journal of Cell Biology</i>, vol. 221,
    no. 8, e202206127, Rockefeller University Press, 2022, doi:<a href="https://doi.org/10.1083/jcb.202206127">10.1083/jcb.202206127</a>.'
  short: J.A. Stopp, M.K. Sixt, Journal of Cell Biology 221 (2022).
date_created: 2023-01-16T10:01:08Z
date_published: 2022-07-20T00:00:00Z
date_updated: 2023-12-21T14:30:01Z
day: '20'
ddc:
- '570'
department:
- _id: MiSi
doi: 10.1083/jcb.202206127
external_id:
  isi:
  - '000874717200001'
  pmid:
  - '35856919'
file:
- access_level: open_access
  checksum: 6b1620743669679b48b9389bb40f5a11
  content_type: application/pdf
  creator: dernst
  date_created: 2023-01-30T10:39:34Z
  date_updated: 2023-01-30T10:39:34Z
  file_id: '12451'
  file_name: 2022_JourCellBiology_Stopp.pdf
  file_size: 969969
  relation: main_file
  success: 1
file_date_updated: 2023-01-30T10:39:34Z
has_accepted_license: '1'
intvolume: '       221'
isi: 1
issue: '8'
keyword:
- Cell Biology
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc-sa/4.0/
month: '07'
oa: 1
oa_version: Published Version
pmid: 1
publication: Journal of Cell Biology
publication_identifier:
  eissn:
  - 1540-8140
  issn:
  - 0021-9525
publication_status: published
publisher: Rockefeller University Press
quality_controlled: '1'
related_material:
  record:
  - id: '14697'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: 'Plan your trip before you leave: The neutrophils’ search-and-run journey'
tmp:
  image: /images/cc_by_nc_sa.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC
    BY-NC-SA 4.0)
  short: CC BY-NC-SA (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 221
year: '2022'
...
---
_id: '7885'
abstract:
- lang: eng
  text: Eukaryotic cells migrate by coupling the intracellular force of the actin
    cytoskeleton to the environment. While force coupling is usually mediated by transmembrane
    adhesion receptors, especially those of the integrin family, amoeboid cells such
    as leukocytes can migrate extremely fast despite very low adhesive forces1. Here
    we show that leukocytes cannot only migrate under low adhesion but can also transmit
    forces in the complete absence of transmembrane force coupling. When confined
    within three-dimensional environments, they use the topographical features of
    the substrate to propel themselves. Here the retrograde flow of the actin cytoskeleton
    follows the texture of the substrate, creating retrograde shear forces that are
    sufficient to drive the cell body forwards. Notably, adhesion-dependent and adhesion-independent
    migration are not mutually exclusive, but rather are variants of the same principle
    of coupling retrograde actin flow to the environment and thus can potentially
    operate interchangeably and simultaneously. As adhesion-free migration is independent
    of the chemical composition of the environment, it renders cells completely autonomous
    in their locomotive behaviour.
acknowledged_ssus:
- _id: Bio
- _id: LifeSc
- _id: M-Shop
acknowledgement: We thank A. Leithner and J. Renkawitz for discussion and critical
  reading of the manuscript; J. Schwarz and M. Mehling for establishing the microfluidic
  setups; the Bioimaging Facility of IST Austria for excellent support, as well as
  the Life Science Facility and the Miba Machine Shop of IST Austria; and F. N. Arslan,
  L. E. Burnett and L. Li for their work during their rotation in the IST PhD programme.
  This work was supported by the European Research Council (ERC StG 281556 and CoG
  724373) to M.S. and grants from the Austrian Science Fund (FWF P29911) and the WWTF
  to M.S. M.H. was supported by the European Regional Development Fund Project (CZ.02.1.01/0.0/0.0/15_003/0000476).
  F.G. received funding from the European Union’s Horizon 2020 research and innovation
  programme under the Marie Skłodowska-Curie grant agreement no. 747687.
article_processing_charge: No
article_type: original
author:
- first_name: Anne
  full_name: Reversat, Anne
  id: 35B76592-F248-11E8-B48F-1D18A9856A87
  last_name: Reversat
  orcid: 0000-0003-0666-8928
- first_name: Florian R
  full_name: Gärtner, Florian R
  id: 397A88EE-F248-11E8-B48F-1D18A9856A87
  last_name: Gärtner
  orcid: 0000-0001-6120-3723
- first_name: Jack
  full_name: Merrin, Jack
  id: 4515C308-F248-11E8-B48F-1D18A9856A87
  last_name: Merrin
  orcid: 0000-0001-5145-4609
- first_name: Julian A
  full_name: Stopp, Julian A
  id: 489E3F00-F248-11E8-B48F-1D18A9856A87
  last_name: Stopp
- first_name: Saren
  full_name: Tasciyan, Saren
  id: 4323B49C-F248-11E8-B48F-1D18A9856A87
  last_name: Tasciyan
  orcid: 0000-0003-1671-393X
- first_name: Juan L
  full_name: Aguilera Servin, Juan L
  id: 2A67C376-F248-11E8-B48F-1D18A9856A87
  last_name: Aguilera Servin
  orcid: 0000-0002-2862-8372
- first_name: Ingrid
  full_name: De Vries, Ingrid
  id: 4C7D837E-F248-11E8-B48F-1D18A9856A87
  last_name: De Vries
- first_name: Robert
  full_name: Hauschild, Robert
  id: 4E01D6B4-F248-11E8-B48F-1D18A9856A87
  last_name: Hauschild
  orcid: 0000-0001-9843-3522
- first_name: Miroslav
  full_name: Hons, Miroslav
  id: 4167FE56-F248-11E8-B48F-1D18A9856A87
  last_name: Hons
  orcid: 0000-0002-6625-3348
- first_name: Matthieu
  full_name: Piel, Matthieu
  last_name: Piel
- first_name: Andrew
  full_name: Callan-Jones, Andrew
  last_name: Callan-Jones
- first_name: Raphael
  full_name: Voituriez, Raphael
  last_name: Voituriez
- first_name: Michael K
  full_name: Sixt, Michael K
  id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87
  last_name: Sixt
  orcid: 0000-0002-6620-9179
citation:
  ama: Reversat A, Gärtner FR, Merrin J, et al. Cellular locomotion using environmental
    topography. <i>Nature</i>. 2020;582:582–585. doi:<a href="https://doi.org/10.1038/s41586-020-2283-z">10.1038/s41586-020-2283-z</a>
  apa: Reversat, A., Gärtner, F. R., Merrin, J., Stopp, J. A., Tasciyan, S., Aguilera
    Servin, J. L., … Sixt, M. K. (2020). Cellular locomotion using environmental topography.
    <i>Nature</i>. Springer Nature. <a href="https://doi.org/10.1038/s41586-020-2283-z">https://doi.org/10.1038/s41586-020-2283-z</a>
  chicago: Reversat, Anne, Florian R Gärtner, Jack Merrin, Julian A Stopp, Saren Tasciyan,
    Juan L Aguilera Servin, Ingrid de Vries, et al. “Cellular Locomotion Using Environmental
    Topography.” <i>Nature</i>. Springer Nature, 2020. <a href="https://doi.org/10.1038/s41586-020-2283-z">https://doi.org/10.1038/s41586-020-2283-z</a>.
  ieee: A. Reversat <i>et al.</i>, “Cellular locomotion using environmental topography,”
    <i>Nature</i>, vol. 582. Springer Nature, pp. 582–585, 2020.
  ista: Reversat A, Gärtner FR, Merrin J, Stopp JA, Tasciyan S, Aguilera Servin JL,
    de Vries I, Hauschild R, Hons M, Piel M, Callan-Jones A, Voituriez R, Sixt MK.
    2020. Cellular locomotion using environmental topography. Nature. 582, 582–585.
  mla: Reversat, Anne, et al. “Cellular Locomotion Using Environmental Topography.”
    <i>Nature</i>, vol. 582, Springer Nature, 2020, pp. 582–585, doi:<a href="https://doi.org/10.1038/s41586-020-2283-z">10.1038/s41586-020-2283-z</a>.
  short: A. Reversat, F.R. Gärtner, J. Merrin, J.A. Stopp, S. Tasciyan, J.L. Aguilera
    Servin, I. de Vries, R. Hauschild, M. Hons, M. Piel, A. Callan-Jones, R. Voituriez,
    M.K. Sixt, Nature 582 (2020) 582–585.
date_created: 2020-05-24T22:01:01Z
date_published: 2020-06-25T00:00:00Z
date_updated: 2024-03-25T23:30:12Z
day: '25'
department:
- _id: NanoFab
- _id: Bio
- _id: MiSi
doi: 10.1038/s41586-020-2283-z
ec_funded: 1
external_id:
  isi:
  - '000532688300008'
intvolume: '       582'
isi: 1
language:
- iso: eng
month: '06'
oa_version: None
page: 582–585
project:
- _id: 25A603A2-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '281556'
  name: Cytoskeletal force generation and force transduction of migrating leukocytes
- _id: 25FE9508-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '724373'
  name: Cellular navigation along spatial gradients
- _id: 26018E70-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P29911
  name: Mechanical adaptation of lamellipodial actin
- _id: 260AA4E2-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '747687'
  name: Mechanical Adaptation of Lamellipodial Actin Networks in Migrating Cells
publication: Nature
publication_identifier:
  eissn:
  - '14764687'
  issn:
  - '00280836'
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  link:
  - description: News on IST Homepage
    relation: press_release
    url: https://ist.ac.at/en/news/off-road-mode-enables-mobile-cells-to-move-freely/
  record:
  - id: '14697'
    relation: dissertation_contains
    status: public
  - id: '12401'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Cellular locomotion using environmental topography
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 582
year: '2020'
...
---
_id: '6328'
abstract:
- lang: eng
  text: During metazoan development, immune surveillance and cancer dissemination,
    cells migrate in complex three-dimensional microenvironments1,2,3. These spaces
    are crowded by cells and extracellular matrix, generating mazes with differently
    sized gaps that are typically smaller than the diameter of the migrating cell4,5.
    Most mesenchymal and epithelial cells and some—but not all—cancer cells actively
    generate their migratory path using pericellular tissue proteolysis6. By contrast,
    amoeboid cells such as leukocytes use non-destructive strategies of locomotion7,
    raising the question how these extremely fast cells navigate through dense tissues.
    Here we reveal that leukocytes sample their immediate vicinity for large pore
    sizes, and are thereby able to choose the path of least resistance. This allows
    them to circumnavigate local obstacles while effectively following global directional
    cues such as chemotactic gradients. Pore-size discrimination is facilitated by
    frontward positioning of the nucleus, which enables the cells to use their bulkiest
    compartment as a mechanical gauge. Once the nucleus and the closely associated
    microtubule organizing centre pass the largest pore, cytoplasmic protrusions still
    lingering in smaller pores are retracted. These retractions are coordinated by
    dynamic microtubules; when microtubules are disrupted, migrating cells lose coherence
    and frequently fragment into migratory cytoplasmic pieces. As nuclear positioning
    in front of the microtubule organizing centre is a typical feature of amoeboid
    migration, our findings link the fundamental organization of cellular polarity
    to the strategy of locomotion.
acknowledged_ssus:
- _id: SSU
article_processing_charge: No
article_type: letter_note
author:
- first_name: Jörg
  full_name: Renkawitz, Jörg
  id: 3F0587C8-F248-11E8-B48F-1D18A9856A87
  last_name: Renkawitz
  orcid: 0000-0003-2856-3369
- first_name: Aglaja
  full_name: Kopf, Aglaja
  id: 31DAC7B6-F248-11E8-B48F-1D18A9856A87
  last_name: Kopf
  orcid: 0000-0002-2187-6656
- first_name: Julian A
  full_name: Stopp, Julian A
  id: 489E3F00-F248-11E8-B48F-1D18A9856A87
  last_name: Stopp
- first_name: Ingrid
  full_name: de Vries, Ingrid
  id: 4C7D837E-F248-11E8-B48F-1D18A9856A87
  last_name: de Vries
- first_name: Meghan K.
  full_name: Driscoll, Meghan K.
  last_name: Driscoll
- first_name: Jack
  full_name: Merrin, Jack
  id: 4515C308-F248-11E8-B48F-1D18A9856A87
  last_name: Merrin
  orcid: 0000-0001-5145-4609
- first_name: Robert
  full_name: Hauschild, Robert
  id: 4E01D6B4-F248-11E8-B48F-1D18A9856A87
  last_name: Hauschild
  orcid: 0000-0001-9843-3522
- first_name: Erik S.
  full_name: Welf, Erik S.
  last_name: Welf
- first_name: Gaudenz
  full_name: Danuser, Gaudenz
  last_name: Danuser
- first_name: Reto
  full_name: Fiolka, Reto
  last_name: Fiolka
- first_name: Michael K
  full_name: Sixt, Michael K
  id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87
  last_name: Sixt
  orcid: 0000-0002-6620-9179
citation:
  ama: Renkawitz J, Kopf A, Stopp JA, et al. Nuclear positioning facilitates amoeboid
    migration along the path of least resistance. <i>Nature</i>. 2019;568:546-550.
    doi:<a href="https://doi.org/10.1038/s41586-019-1087-5">10.1038/s41586-019-1087-5</a>
  apa: Renkawitz, J., Kopf, A., Stopp, J. A., de Vries, I., Driscoll, M. K., Merrin,
    J., … Sixt, M. K. (2019). Nuclear positioning facilitates amoeboid migration along
    the path of least resistance. <i>Nature</i>. Springer Nature. <a href="https://doi.org/10.1038/s41586-019-1087-5">https://doi.org/10.1038/s41586-019-1087-5</a>
  chicago: Renkawitz, Jörg, Aglaja Kopf, Julian A Stopp, Ingrid de Vries, Meghan K.
    Driscoll, Jack Merrin, Robert Hauschild, et al. “Nuclear Positioning Facilitates
    Amoeboid Migration along the Path of Least Resistance.” <i>Nature</i>. Springer
    Nature, 2019. <a href="https://doi.org/10.1038/s41586-019-1087-5">https://doi.org/10.1038/s41586-019-1087-5</a>.
  ieee: J. Renkawitz <i>et al.</i>, “Nuclear positioning facilitates amoeboid migration
    along the path of least resistance,” <i>Nature</i>, vol. 568. Springer Nature,
    pp. 546–550, 2019.
  ista: Renkawitz J, Kopf A, Stopp JA, de Vries I, Driscoll MK, Merrin J, Hauschild
    R, Welf ES, Danuser G, Fiolka R, Sixt MK. 2019. Nuclear positioning facilitates
    amoeboid migration along the path of least resistance. Nature. 568, 546–550.
  mla: Renkawitz, Jörg, et al. “Nuclear Positioning Facilitates Amoeboid Migration
    along the Path of Least Resistance.” <i>Nature</i>, vol. 568, Springer Nature,
    2019, pp. 546–50, doi:<a href="https://doi.org/10.1038/s41586-019-1087-5">10.1038/s41586-019-1087-5</a>.
  short: J. Renkawitz, A. Kopf, J.A. Stopp, I. de Vries, M.K. Driscoll, J. Merrin,
    R. Hauschild, E.S. Welf, G. Danuser, R. Fiolka, M.K. Sixt, Nature 568 (2019) 546–550.
date_created: 2019-04-17T06:52:28Z
date_published: 2019-04-25T00:00:00Z
date_updated: 2024-03-25T23:30:22Z
day: '25'
department:
- _id: MiSi
- _id: NanoFab
- _id: Bio
doi: 10.1038/s41586-019-1087-5
ec_funded: 1
external_id:
  isi:
  - '000465594200050'
  pmid:
  - '30944468'
intvolume: '       568'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7217284/
month: '04'
oa: 1
oa_version: Submitted Version
page: 546-550
pmid: 1
project:
- _id: 25A603A2-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '281556'
  name: Cytoskeletal force generation and force transduction of migrating leukocytes
    (EU)
- _id: 25FE9508-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '724373'
  name: Cellular navigation along spatial gradients
- _id: 265FAEBA-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: W01250-B20
  name: Nano-Analytics of Cellular Systems
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
- _id: 25A48D24-B435-11E9-9278-68D0E5697425
  grant_number: ALTF 1396-2014
  name: Molecular and system level view of immune cell migration
publication: Nature
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  link:
  - description: News on IST Homepage
    relation: press_release
    url: https://ist.ac.at/en/news/leukocytes-use-their-nucleus-as-a-ruler-to-choose-path-of-least-resistance/
  record:
  - id: '14697'
    relation: dissertation_contains
    status: public
  - id: '6891'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Nuclear positioning facilitates amoeboid migration along the path of least
  resistance
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 568
year: '2019'
...
---
_id: '6059'
abstract:
- lang: eng
  text: Neutrophils or polymorphonuclear cells (PMN) eliminate bacteria via phagocytosis
    and/or NETosis. Apartfrom these conventional roles, PMN also have immune-regulatory
    functions. They can transdifferentiateand upregulate MHCII as well as ligands
    for costimulatory receptors which enables them to behave asantigen presenting
    cells (APC). The initial step for activating T-cells is the formation of an immunesynapse
    between T-cells and antigen-presenting cells. However, the immune synapse that
    develops atthe PMN/T-cell contact zone is as yet hardly investigated due to the
    non-availability of methods foranalysis of large number of PMN interactions. In
    order to overcome these obstacles, we introduce herea workflow to analyse the
    immune synapse of primary human PMN and T-cells using multispectral imag-ing flow
    cytometry (InFlow microscopy) and super-resolution microscopy. For that purpose,
    we used CD3and CD66b as the lineage markers for T-cells and PMN, respectively.
    Thereafter, we applied and criticallydiscussed various ‘‘masks” for identification
    of T-cell PMN interactions. Using this approach, we foundthat a small fraction
    of transdifferentiated PMN (CD66b+CD86high) formed stable PMN/T-cell conjugates.Interestingly,
    while both CD3 and CD66b accumulation in the immune synapse was dependent on thematuration
    state of the PMN, only CD3 accumulation was greatly enhanced by the presence of
    superanti-gen. The actin cytoskeleton was weakly rearranged at the PMN side on
    the immune synapse upon contactwith a T-cell in the presence of superantigen.
    A more detailed analysis using super-resolution microscopy(structured-illumination
    microscopy, SIM) confirmed this finding. Together, we present an InFlow micro-scopy
    based approach for the large scale analysis of PMN/T-cell interactions and – combined
    with SIM – apossibility for an in-depth analysis of protein translocation at the
    site of interactions.
author:
- first_name: Emre
  full_name: Balta, Emre
  last_name: Balta
- first_name: Julian A
  full_name: Stopp, Julian A
  id: 489E3F00-F248-11E8-B48F-1D18A9856A87
  last_name: Stopp
- first_name: Laura
  full_name: Castelletti, Laura
  last_name: Castelletti
- first_name: Henning
  full_name: Kirchgessner, Henning
  last_name: Kirchgessner
- first_name: Yvonne
  full_name: Samstag, Yvonne
  last_name: Samstag
- first_name: Guido H.
  full_name: Wabnitz, Guido H.
  last_name: Wabnitz
citation:
  ama: Balta E, Stopp JA, Castelletti L, Kirchgessner H, Samstag Y, Wabnitz GH. Qualitative
    and quantitative analysis of PMN/T-cell interactions by InFlow and super-resolution
    microscopy. <i>Methods</i>. 2017;112(1):25-38. doi:<a href="https://doi.org/10.1016/j.ymeth.2016.09.013">10.1016/j.ymeth.2016.09.013</a>
  apa: Balta, E., Stopp, J. A., Castelletti, L., Kirchgessner, H., Samstag, Y., &#38;
    Wabnitz, G. H. (2017). Qualitative and quantitative analysis of PMN/T-cell interactions
    by InFlow and super-resolution microscopy. <i>Methods</i>. Elsevier. <a href="https://doi.org/10.1016/j.ymeth.2016.09.013">https://doi.org/10.1016/j.ymeth.2016.09.013</a>
  chicago: Balta, Emre, Julian A Stopp, Laura Castelletti, Henning Kirchgessner, Yvonne
    Samstag, and Guido H. Wabnitz. “Qualitative and Quantitative Analysis of PMN/T-Cell
    Interactions by InFlow and Super-Resolution Microscopy.” <i>Methods</i>. Elsevier,
    2017. <a href="https://doi.org/10.1016/j.ymeth.2016.09.013">https://doi.org/10.1016/j.ymeth.2016.09.013</a>.
  ieee: E. Balta, J. A. Stopp, L. Castelletti, H. Kirchgessner, Y. Samstag, and G.
    H. Wabnitz, “Qualitative and quantitative analysis of PMN/T-cell interactions
    by InFlow and super-resolution microscopy,” <i>Methods</i>, vol. 112, no. 1. Elsevier,
    pp. 25–38, 2017.
  ista: Balta E, Stopp JA, Castelletti L, Kirchgessner H, Samstag Y, Wabnitz GH. 2017.
    Qualitative and quantitative analysis of PMN/T-cell interactions by InFlow and
    super-resolution microscopy. Methods. 112(1), 25–38.
  mla: Balta, Emre, et al. “Qualitative and Quantitative Analysis of PMN/T-Cell Interactions
    by InFlow and Super-Resolution Microscopy.” <i>Methods</i>, vol. 112, no. 1, Elsevier,
    2017, pp. 25–38, doi:<a href="https://doi.org/10.1016/j.ymeth.2016.09.013">10.1016/j.ymeth.2016.09.013</a>.
  short: E. Balta, J.A. Stopp, L. Castelletti, H. Kirchgessner, Y. Samstag, G.H. Wabnitz,
    Methods 112 (2017) 25–38.
date_created: 2019-02-26T13:45:17Z
date_published: 2017-01-01T00:00:00Z
date_updated: 2021-01-12T08:05:57Z
day: '01'
doi: 10.1016/j.ymeth.2016.09.013
extern: '1'
external_id:
  pmid:
  - '27693880'
intvolume: '       112'
issue: '1'
language:
- iso: eng
month: '01'
oa_version: None
page: 25-38
pmid: 1
publication: Methods
publication_identifier:
  issn:
  - 1046-2023
publication_status: published
publisher: Elsevier
quality_controlled: '1'
related_material:
  link:
  - relation: supplementary_material
    url: http://dx.doi.org/10.1016/j.ymeth.2016.09.013
status: public
title: Qualitative and quantitative analysis of PMN/T-cell interactions by InFlow
  and super-resolution microscopy
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 112
year: '2017'
...
