---
_id: '14846'
abstract:
- lang: eng
  text: Contraction and flow of the actin cell cortex have emerged as a common principle
    by which cells reorganize their cytoplasm and take shape. However, how these cortical
    flows interact with adjacent cytoplasmic components, changing their form and localization,
    and how this affects cytoplasmic organization and cell shape remains unclear.
    Here we show that in ascidian oocytes, the cooperative activities of cortical
    actomyosin flows and deformation of the adjacent mitochondria-rich myoplasm drive
    oocyte cytoplasmic reorganization and shape changes following fertilization. We
    show that vegetal-directed cortical actomyosin flows, established upon oocyte
    fertilization, lead to both the accumulation of cortical actin at the vegetal
    pole of the zygote and compression and local buckling of the adjacent elastic
    solid-like myoplasm layer due to friction forces generated at their interface.
    Once cortical flows have ceased, the multiple myoplasm buckles resolve into one
    larger buckle, which again drives the formation of the contraction pole—a protuberance
    of the zygote’s vegetal pole where maternal mRNAs accumulate. Thus, our findings
    reveal a mechanism where cortical actomyosin network flows determine cytoplasmic
    reorganization and cell shape by deforming adjacent cytoplasmic components through
    friction forces.
acknowledged_ssus:
- _id: EM-Fac
- _id: Bio
- _id: NanoFab
acknowledgement: We would like to thank A. McDougall, E. Hannezo and the Heisenberg
  lab for fruitful discussions and reagents. We also thank E. Munro for the iMyo-YFP
  and Bra>iMyo-mScarlet constructs. This research was supported by the Scientific
  Service Units of the Institute of Science and Technology Austria through resources
  provided by the Electron Microscopy Facility, Imaging and Optics Facility and the
  Nanofabrication Facility. This work was supported by a Joint Project Grant from
  the FWF (I 3601-B27).
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Silvia
  full_name: Caballero Mancebo, Silvia
  id: 2F1E1758-F248-11E8-B48F-1D18A9856A87
  last_name: Caballero Mancebo
  orcid: 0000-0002-5223-3346
- first_name: Rushikesh
  full_name: Shinde, Rushikesh
  last_name: Shinde
- first_name: Madison
  full_name: Bolger-Munro, Madison
  id: 516F03FA-93A3-11EA-A7C5-D6BE3DDC885E
  last_name: Bolger-Munro
  orcid: 0000-0002-8176-4824
- first_name: Matilda
  full_name: Peruzzo, Matilda
  id: 3F920B30-F248-11E8-B48F-1D18A9856A87
  last_name: Peruzzo
  orcid: 0000-0002-3415-4628
- first_name: Gregory
  full_name: Szep, Gregory
  id: 4BFB7762-F248-11E8-B48F-1D18A9856A87
  last_name: Szep
- first_name: Irene
  full_name: Steccari, Irene
  id: 2705C766-9FE2-11EA-B224-C6773DDC885E
  last_name: Steccari
- first_name: David
  full_name: Labrousse Arias, David
  id: CD573DF4-9ED3-11E9-9D77-3223E6697425
  last_name: Labrousse Arias
- first_name: Vanessa
  full_name: Zheden, Vanessa
  id: 39C5A68A-F248-11E8-B48F-1D18A9856A87
  last_name: Zheden
  orcid: 0000-0002-9438-4783
- first_name: Jack
  full_name: Merrin, Jack
  id: 4515C308-F248-11E8-B48F-1D18A9856A87
  last_name: Merrin
  orcid: 0000-0001-5145-4609
- first_name: Andrew
  full_name: Callan-Jones, Andrew
  last_name: Callan-Jones
- first_name: Raphaël
  full_name: Voituriez, Raphaël
  last_name: Voituriez
- first_name: Carl-Philipp J
  full_name: Heisenberg, Carl-Philipp J
  id: 39427864-F248-11E8-B48F-1D18A9856A87
  last_name: Heisenberg
  orcid: 0000-0002-0912-4566
citation:
  ama: Caballero Mancebo S, Shinde R, Bolger-Munro M, et al. Friction forces determine
    cytoplasmic reorganization and shape changes of ascidian oocytes upon fertilization.
    <i>Nature Physics</i>. 2024. doi:<a href="https://doi.org/10.1038/s41567-023-02302-1">10.1038/s41567-023-02302-1</a>
  apa: Caballero Mancebo, S., Shinde, R., Bolger-Munro, M., Peruzzo, M., Szep, G.,
    Steccari, I., … Heisenberg, C.-P. J. (2024). Friction forces determine cytoplasmic
    reorganization and shape changes of ascidian oocytes upon fertilization. <i>Nature
    Physics</i>. Springer Nature. <a href="https://doi.org/10.1038/s41567-023-02302-1">https://doi.org/10.1038/s41567-023-02302-1</a>
  chicago: Caballero Mancebo, Silvia, Rushikesh Shinde, Madison Bolger-Munro, Matilda
    Peruzzo, Gregory Szep, Irene Steccari, David Labrousse Arias, et al. “Friction
    Forces Determine Cytoplasmic Reorganization and Shape Changes of Ascidian Oocytes
    upon Fertilization.” <i>Nature Physics</i>. Springer Nature, 2024. <a href="https://doi.org/10.1038/s41567-023-02302-1">https://doi.org/10.1038/s41567-023-02302-1</a>.
  ieee: S. Caballero Mancebo <i>et al.</i>, “Friction forces determine cytoplasmic
    reorganization and shape changes of ascidian oocytes upon fertilization,” <i>Nature
    Physics</i>. Springer Nature, 2024.
  ista: Caballero Mancebo S, Shinde R, Bolger-Munro M, Peruzzo M, Szep G, Steccari
    I, Labrousse Arias D, Zheden V, Merrin J, Callan-Jones A, Voituriez R, Heisenberg
    C-PJ. 2024. Friction forces determine cytoplasmic reorganization and shape changes
    of ascidian oocytes upon fertilization. Nature Physics.
  mla: Caballero Mancebo, Silvia, et al. “Friction Forces Determine Cytoplasmic Reorganization
    and Shape Changes of Ascidian Oocytes upon Fertilization.” <i>Nature Physics</i>,
    Springer Nature, 2024, doi:<a href="https://doi.org/10.1038/s41567-023-02302-1">10.1038/s41567-023-02302-1</a>.
  short: S. Caballero Mancebo, R. Shinde, M. Bolger-Munro, M. Peruzzo, G. Szep, I.
    Steccari, D. Labrousse Arias, V. Zheden, J. Merrin, A. Callan-Jones, R. Voituriez,
    C.-P.J. Heisenberg, Nature Physics (2024).
date_created: 2024-01-21T23:00:57Z
date_published: 2024-01-09T00:00:00Z
date_updated: 2024-03-05T09:33:38Z
day: '09'
department:
- _id: CaHe
- _id: JoFi
- _id: MiSi
- _id: EM-Fac
- _id: NanoFab
doi: 10.1038/s41567-023-02302-1
has_accepted_license: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1038/s41567-023-02302-1
month: '01'
oa: 1
oa_version: Published Version
project:
- _id: 2646861A-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: I03601
  name: Control of embryonic cleavage pattern
publication: Nature Physics
publication_identifier:
  eissn:
  - 1745-2481
  issn:
  - 1745-2473
publication_status: epub_ahead
publisher: Springer Nature
quality_controlled: '1'
related_material:
  link:
  - description: News on ISTA Website
    relation: press_release
    url: https://ista.ac.at/en/news/stranger-than-friction-a-force-initiating-life/
scopus_import: '1'
status: public
title: Friction forces determine cytoplasmic reorganization and shape changes of ascidian
  oocytes upon fertilization
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2024'
...
---
_id: '10703'
abstract:
- lang: eng
  text: 'When crawling through the body, leukocytes often traverse tissues that are
    densely packed with extracellular matrix and other cells, and this raises the
    question: How do leukocytes overcome compressive mechanical loads? Here, we show
    that the actin cortex of leukocytes is mechanoresponsive and that this responsiveness
    requires neither force sensing via the nucleus nor adhesive interactions with
    a substrate. Upon global compression of the cell body as well as local indentation
    of the plasma membrane, Wiskott-Aldrich syndrome protein (WASp) assembles into
    dot-like structures, providing activation platforms for Arp2/3 nucleated actin
    patches. These patches locally push against the external load, which can be obstructing
    collagen fibers or other cells, and thereby create space to facilitate forward
    locomotion. We show in vitro and in vivo that this WASp function is rate limiting
    for ameboid leukocyte migration in dense but not in loose environments and is
    required for trafficking through diverse tissues such as skin and lymph nodes.'
acknowledged_ssus:
- _id: LifeSc
- _id: Bio
- _id: EM-Fac
acknowledgement: We thank N. Darwish-Miranda, F. Leite, F.P. Assen, and A. Eichner
  for advice and help with experiments. We thank J. Renkawitz, E. Kiermaier, A. Juanes
  Garcia, and M. Avellaneda for critical reading of the manuscript. We thank M. Driscoll
  for advice on fluorescent labeling of collagen gels. This research was supported
  by the Scientific Service Units (SSUs) of IST Austria through resources provided
  by Molecular Biology Services/Lab Support Facility (LSF)/Bioimaging Facility/Electron
  Microscopy Facility. This work was funded by grants from the European Research Council
  ( CoG 724373 ) and the Austrian Science Foundation (FWF) to M.S. F.G. received funding
  from the European Union’s Horizon 2020 research and innovation program under the
  Marie Skłodowska-Curie grant agreement no. 747687.
article_processing_charge: No
article_type: original
author:
- first_name: Florian
  full_name: Gaertner, Florian
  last_name: Gaertner
- first_name: Patricia
  full_name: Reis-Rodrigues, Patricia
  last_name: Reis-Rodrigues
- first_name: Ingrid
  full_name: De Vries, Ingrid
  id: 4C7D837E-F248-11E8-B48F-1D18A9856A87
  last_name: De Vries
- first_name: Miroslav
  full_name: Hons, Miroslav
  id: 4167FE56-F248-11E8-B48F-1D18A9856A87
  last_name: Hons
  orcid: 0000-0002-6625-3348
- first_name: Juan
  full_name: Aguilera, Juan
  last_name: Aguilera
- first_name: Michael
  full_name: Riedl, Michael
  id: 3BE60946-F248-11E8-B48F-1D18A9856A87
  last_name: Riedl
  orcid: 0000-0003-4844-6311
- first_name: Alexander F
  full_name: Leithner, Alexander F
  id: 3B1B77E4-F248-11E8-B48F-1D18A9856A87
  last_name: Leithner
  orcid: 0000-0002-1073-744X
- first_name: Saren
  full_name: Tasciyan, Saren
  id: 4323B49C-F248-11E8-B48F-1D18A9856A87
  last_name: Tasciyan
  orcid: 0000-0003-1671-393X
- first_name: Aglaja
  full_name: Kopf, Aglaja
  id: 31DAC7B6-F248-11E8-B48F-1D18A9856A87
  last_name: Kopf
  orcid: 0000-0002-2187-6656
- first_name: Jack
  full_name: Merrin, Jack
  id: 4515C308-F248-11E8-B48F-1D18A9856A87
  last_name: Merrin
  orcid: 0000-0001-5145-4609
- first_name: Vanessa
  full_name: Zheden, Vanessa
  id: 39C5A68A-F248-11E8-B48F-1D18A9856A87
  last_name: Zheden
  orcid: 0000-0002-9438-4783
- first_name: Walter
  full_name: Kaufmann, Walter
  id: 3F99E422-F248-11E8-B48F-1D18A9856A87
  last_name: Kaufmann
  orcid: 0000-0001-9735-5315
- first_name: Robert
  full_name: Hauschild, Robert
  id: 4E01D6B4-F248-11E8-B48F-1D18A9856A87
  last_name: Hauschild
  orcid: 0000-0001-9843-3522
- first_name: Michael K
  full_name: Sixt, Michael K
  id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87
  last_name: Sixt
  orcid: 0000-0002-6620-9179
citation:
  ama: Gaertner F, Reis-Rodrigues P, de Vries I, et al. WASp triggers mechanosensitive
    actin patches to facilitate immune cell migration in dense tissues. <i>Developmental
    Cell</i>. 2022;57(1):47-62.e9. doi:<a href="https://doi.org/10.1016/j.devcel.2021.11.024">10.1016/j.devcel.2021.11.024</a>
  apa: Gaertner, F., Reis-Rodrigues, P., de Vries, I., Hons, M., Aguilera, J., Riedl,
    M., … Sixt, M. K. (2022). WASp triggers mechanosensitive actin patches to facilitate
    immune cell migration in dense tissues. <i>Developmental Cell</i>. Cell Press ;
    Elsevier. <a href="https://doi.org/10.1016/j.devcel.2021.11.024">https://doi.org/10.1016/j.devcel.2021.11.024</a>
  chicago: Gaertner, Florian, Patricia Reis-Rodrigues, Ingrid de Vries, Miroslav Hons,
    Juan Aguilera, Michael Riedl, Alexander F Leithner, et al. “WASp Triggers Mechanosensitive
    Actin Patches to Facilitate Immune Cell Migration in Dense Tissues.” <i>Developmental
    Cell</i>. Cell Press ; Elsevier, 2022. <a href="https://doi.org/10.1016/j.devcel.2021.11.024">https://doi.org/10.1016/j.devcel.2021.11.024</a>.
  ieee: F. Gaertner <i>et al.</i>, “WASp triggers mechanosensitive actin patches to
    facilitate immune cell migration in dense tissues,” <i>Developmental Cell</i>,
    vol. 57, no. 1. Cell Press ; Elsevier, p. 47–62.e9, 2022.
  ista: Gaertner F, Reis-Rodrigues P, de Vries I, Hons M, Aguilera J, Riedl M, Leithner
    AF, Tasciyan S, Kopf A, Merrin J, Zheden V, Kaufmann W, Hauschild R, Sixt MK.
    2022. WASp triggers mechanosensitive actin patches to facilitate immune cell migration
    in dense tissues. Developmental Cell. 57(1), 47–62.e9.
  mla: Gaertner, Florian, et al. “WASp Triggers Mechanosensitive Actin Patches to
    Facilitate Immune Cell Migration in Dense Tissues.” <i>Developmental Cell</i>,
    vol. 57, no. 1, Cell Press ; Elsevier, 2022, p. 47–62.e9, doi:<a href="https://doi.org/10.1016/j.devcel.2021.11.024">10.1016/j.devcel.2021.11.024</a>.
  short: F. Gaertner, P. Reis-Rodrigues, I. de Vries, M. Hons, J. Aguilera, M. Riedl,
    A.F. Leithner, S. Tasciyan, A. Kopf, J. Merrin, V. Zheden, W. Kaufmann, R. Hauschild,
    M.K. Sixt, Developmental Cell 57 (2022) 47–62.e9.
date_created: 2022-01-30T23:01:33Z
date_published: 2022-01-10T00:00:00Z
date_updated: 2024-03-25T23:30:12Z
day: '10'
ddc:
- '570'
department:
- _id: MiSi
- _id: EM-Fac
- _id: NanoFab
- _id: BjHo
doi: 10.1016/j.devcel.2021.11.024
ec_funded: 1
external_id:
  isi:
  - '000768933800005'
  pmid:
  - '34919802'
intvolume: '        57'
isi: 1
issue: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.sciencedirect.com/science/article/pii/S1534580721009497
month: '01'
oa: 1
oa_version: Published Version
page: 47-62.e9
pmid: 1
project:
- _id: 260AA4E2-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '747687'
  name: Mechanical Adaptation of Lamellipodial Actin Networks in Migrating Cells
- _id: 25FE9508-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '724373'
  name: Cellular navigation along spatial gradients
publication: Developmental Cell
publication_identifier:
  eissn:
  - 1878-1551
  issn:
  - 1534-5807
publication_status: published
publisher: Cell Press ; Elsevier
quality_controlled: '1'
related_material:
  record:
  - id: '12726'
    relation: dissertation_contains
    status: public
  - id: '14530'
    relation: dissertation_contains
    status: public
  - id: '12401'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: WASp triggers mechanosensitive actin patches to facilitate immune cell migration
  in dense tissues
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 57
year: '2022'
...
---
_id: '9363'
abstract:
- lang: eng
  text: Optogenetics has been harnessed to shed new mechanistic light on current and
    future therapeutic strategies. This has been to date achieved by the regulation
    of ion flow and electrical signals in neuronal cells and neural circuits that
    are known to be affected by disease. In contrast, the optogenetic delivery of
    trophic biochemical signals, which support cell survival and are implicated in
    degenerative disorders, has never been demonstrated in an animal model of disease.
    Here, we reengineered the human and Drosophila melanogaster REarranged during
    Transfection (hRET and dRET) receptors to be activated by light, creating one-component
    optogenetic tools termed Opto-hRET and Opto-dRET. Upon blue light stimulation,
    these receptors robustly induced the MAPK/ERK proliferative signaling pathway
    in cultured cells. In PINK1B9 flies that exhibit loss of PTEN-induced putative
    kinase 1 (PINK1), a kinase associated with familial Parkinson’s disease (PD),
    light activation of Opto-dRET suppressed mitochondrial defects, tissue degeneration
    and behavioral deficits. In human cells with PINK1 loss-of-function, mitochondrial
    fragmentation was rescued using Opto-dRET via the PI3K/NF-кB pathway. Our results
    demonstrate that a light-activated receptor can ameliorate disease hallmarks in
    a genetic model of PD. The optogenetic delivery of trophic signals is cell type-specific
    and reversible and thus has the potential to inspire novel strategies towards
    a spatio-temporal regulation of tissue repair.
acknowledgement: We thank R. Cagan, A. Whitworth and J. Nagpal for fly lines and advice,
  S. Herlitze for provision of a tissue culture illuminator, and Verian Bader for
  help with statistical analysis.
article_processing_charge: No
author:
- first_name: Álvaro
  full_name: Inglés Prieto, Álvaro
  id: 2A9DB292-F248-11E8-B48F-1D18A9856A87
  last_name: Inglés Prieto
  orcid: 0000-0002-5409-8571
- first_name: Nikolas
  full_name: Furthmann, Nikolas
  last_name: Furthmann
- first_name: Samuel H.
  full_name: Crossman, Samuel H.
  last_name: Crossman
- first_name: Alexandra Madelaine
  full_name: Tichy, Alexandra Madelaine
  last_name: Tichy
- first_name: Nina
  full_name: Hoyer, Nina
  last_name: Hoyer
- first_name: Meike
  full_name: Petersen, Meike
  last_name: Petersen
- first_name: Vanessa
  full_name: Zheden, Vanessa
  id: 39C5A68A-F248-11E8-B48F-1D18A9856A87
  last_name: Zheden
- first_name: Julia
  full_name: Bicher, Julia
  id: 3CCBB46E-F248-11E8-B48F-1D18A9856A87
  last_name: Bicher
- first_name: Eva
  full_name: Gschaider-Reichhart, Eva
  id: 3FEE232A-F248-11E8-B48F-1D18A9856A87
  last_name: Gschaider-Reichhart
  orcid: 0000-0002-7218-7738
- first_name: Attila
  full_name: György, Attila
  id: 3BCEDBE0-F248-11E8-B48F-1D18A9856A87
  last_name: György
  orcid: 0000-0002-1819-198X
- first_name: Daria E
  full_name: Siekhaus, Daria E
  id: 3D224B9E-F248-11E8-B48F-1D18A9856A87
  last_name: Siekhaus
  orcid: 0000-0001-8323-8353
- first_name: Peter
  full_name: Soba, Peter
  last_name: Soba
- first_name: Konstanze F.
  full_name: Winklhofer, Konstanze F.
  last_name: Winklhofer
- first_name: Harald L
  full_name: Janovjak, Harald L
  id: 33BA6C30-F248-11E8-B48F-1D18A9856A87
  last_name: Janovjak
  orcid: 0000-0002-8023-9315
citation:
  ama: Inglés Prieto Á, Furthmann N, Crossman SH, et al. Optogenetic delivery of trophic
    signals in a genetic model of Parkinson’s disease. <i>PLoS genetics</i>. 2021;17(4):e1009479.
    doi:<a href="https://doi.org/10.1371/journal.pgen.1009479">10.1371/journal.pgen.1009479</a>
  apa: Inglés Prieto, Á., Furthmann, N., Crossman, S. H., Tichy, A. M., Hoyer, N.,
    Petersen, M., … Janovjak, H. L. (2021). Optogenetic delivery of trophic signals
    in a genetic model of Parkinson’s disease. <i>PLoS Genetics</i>. Public Library
    of Science. <a href="https://doi.org/10.1371/journal.pgen.1009479">https://doi.org/10.1371/journal.pgen.1009479</a>
  chicago: Inglés Prieto, Álvaro, Nikolas Furthmann, Samuel H. Crossman, Alexandra
    Madelaine Tichy, Nina Hoyer, Meike Petersen, Vanessa Zheden, et al. “Optogenetic
    Delivery of Trophic Signals in a Genetic Model of Parkinson’s Disease.” <i>PLoS
    Genetics</i>. Public Library of Science, 2021. <a href="https://doi.org/10.1371/journal.pgen.1009479">https://doi.org/10.1371/journal.pgen.1009479</a>.
  ieee: Á. Inglés Prieto <i>et al.</i>, “Optogenetic delivery of trophic signals in
    a genetic model of Parkinson’s disease,” <i>PLoS genetics</i>, vol. 17, no. 4.
    Public Library of Science, p. e1009479, 2021.
  ista: Inglés Prieto Á, Furthmann N, Crossman SH, Tichy AM, Hoyer N, Petersen M,
    Zheden V, Bicher J, Gschaider-Reichhart E, György A, Siekhaus DE, Soba P, Winklhofer
    KF, Janovjak HL. 2021. Optogenetic delivery of trophic signals in a genetic model
    of Parkinson’s disease. PLoS genetics. 17(4), e1009479.
  mla: Inglés Prieto, Álvaro, et al. “Optogenetic Delivery of Trophic Signals in a
    Genetic Model of Parkinson’s Disease.” <i>PLoS Genetics</i>, vol. 17, no. 4, Public
    Library of Science, 2021, p. e1009479, doi:<a href="https://doi.org/10.1371/journal.pgen.1009479">10.1371/journal.pgen.1009479</a>.
  short: Á. Inglés Prieto, N. Furthmann, S.H. Crossman, A.M. Tichy, N. Hoyer, M. Petersen,
    V. Zheden, J. Bicher, E. Gschaider-Reichhart, A. György, D.E. Siekhaus, P. Soba,
    K.F. Winklhofer, H.L. Janovjak, PLoS Genetics 17 (2021) e1009479.
date_created: 2021-05-02T22:01:29Z
date_published: 2021-04-01T00:00:00Z
date_updated: 2023-08-08T13:17:47Z
day: '01'
ddc:
- '570'
department:
- _id: EM-Fac
- _id: LoSw
- _id: DaSi
doi: 10.1371/journal.pgen.1009479
external_id:
  isi:
  - '000640606700001'
file:
- access_level: open_access
  checksum: 82a74668f863e8dfb22fdd4f845c92ce
  content_type: application/pdf
  creator: kschuh
  date_created: 2021-05-04T09:05:27Z
  date_updated: 2021-05-04T09:05:27Z
  file_id: '9369'
  file_name: 2021_PLOS_Ingles-Prieto.pdf
  file_size: 3072764
  relation: main_file
  success: 1
file_date_updated: 2021-05-04T09:05:27Z
has_accepted_license: '1'
intvolume: '        17'
isi: 1
issue: '4'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
page: e1009479
publication: PLoS genetics
publication_identifier:
  eissn:
  - '15537404'
publication_status: published
publisher: Public Library of Science
quality_controlled: '1'
scopus_import: '1'
status: public
title: Optogenetic delivery of trophic signals in a genetic model of Parkinson's disease
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 17
year: '2021'
...
---
_id: '9887'
abstract:
- lang: eng
  text: Clathrin-mediated endocytosis is the major route of entry of cargos into cells
    and thus underpins many physiological processes. During endocytosis, an area of
    flat membrane is remodeled by proteins to create a spherical vesicle against intracellular
    forces. The protein machinery which mediates this membrane bending in plants is
    unknown. However, it is known that plant endocytosis is actin independent, thus
    indicating that plants utilize a unique mechanism to mediate membrane bending
    against high-turgor pressure compared to other model systems. Here, we investigate
    the TPLATE complex, a plant-specific endocytosis protein complex. It has been
    thought to function as a classical adaptor functioning underneath the clathrin
    coat. However, by using biochemical and advanced live microscopy approaches, we
    found that TPLATE is peripherally associated with clathrin-coated vesicles and
    localizes at the rim of endocytosis events. As this localization is more fitting
    to the protein machinery involved in membrane bending during endocytosis, we examined
    cells in which the TPLATE complex was disrupted and found that the clathrin structures
    present as flat patches. This suggests a requirement of the TPLATE complex for
    membrane bending during plant clathrin–mediated endocytosis. Next, we used in
    vitro biophysical assays to confirm that the TPLATE complex possesses protein
    domains with intrinsic membrane remodeling activity. These results redefine the
    role of the TPLATE complex and implicate it as a key component of the evolutionarily
    distinct plant endocytosis mechanism, which mediates endocytic membrane bending
    against the high-turgor pressure in plant cells.
acknowledged_ssus:
- _id: EM-Fac
- _id: LifeSc
- _id: Bio
acknowledgement: 'We gratefully thank Julie Neveu and Dr. Amanda Barranco of the Grégory
  Vert laboratory for help preparing plants in France, Dr. Zuzana Gelova for help
  and advice with protoplast generation, Dr. Stéphane Vassilopoulos and Dr. Florian
  Schur for advice regarding EM tomography, Alejandro Marquiegui Alvaro for help with
  material generation, and Dr. Lukasz Kowalski for generously gifting us the mWasabi
  protein. This research was supported by the Scientific Service Units of Institute
  of Science and Technology Austria (IST Austria) through resources provided by the
  Electron Microscopy Facility, Lab Support Facility (particularly Dorota Jaworska),
  and the Bioimaging Facility. We acknowledge the Advanced Microscopy Facility of
  the Vienna BioCenter Core Facilities for use of the 3D SIM. For the mass spectrometry
  analysis of proteins, we acknowledge the University of Natural Resources and Life
  Sciences (BOKU) Core Facility Mass Spectrometry. This work was supported by the
  following funds: A.J. is supported by funding from the Austrian Science Fund I3630B25
  to J.F. P.M. and E.B. are supported by Agence Nationale de la Recherche ANR-11-EQPX-0029
  Morphoscope2 and ANR-10-INBS-04 France BioImaging. S.Y.B. is supported by the NSF
  No. 1121998 and 1614915. J.W. and D.V.D. are supported by the European Research
  Council Grant 682436 (to D.V.D.), a China Scholarship Council Grant 201508440249
  (to J.W.), and by a Ghent University Special Research Co-funding Grant ST01511051
  (to J.W.).'
article_number: e2113046118
article_processing_charge: No
article_type: original
author:
- first_name: Alexander J
  full_name: Johnson, Alexander J
  id: 46A62C3A-F248-11E8-B48F-1D18A9856A87
  last_name: Johnson
  orcid: 0000-0002-2739-8843
- first_name: Dana A
  full_name: Dahhan, Dana A
  last_name: Dahhan
- first_name: Nataliia
  full_name: Gnyliukh, Nataliia
  id: 390C1120-F248-11E8-B48F-1D18A9856A87
  last_name: Gnyliukh
  orcid: 0000-0002-2198-0509
- first_name: Walter
  full_name: Kaufmann, Walter
  id: 3F99E422-F248-11E8-B48F-1D18A9856A87
  last_name: Kaufmann
  orcid: 0000-0001-9735-5315
- first_name: Vanessa
  full_name: Zheden, Vanessa
  id: 39C5A68A-F248-11E8-B48F-1D18A9856A87
  last_name: Zheden
  orcid: 0000-0002-9438-4783
- first_name: Tommaso
  full_name: Costanzo, Tommaso
  id: D93824F4-D9BA-11E9-BB12-F207E6697425
  last_name: Costanzo
  orcid: 0000-0001-9732-3815
- first_name: Pierre
  full_name: Mahou, Pierre
  last_name: Mahou
- first_name: Mónika
  full_name: Hrtyan, Mónika
  id: 45A71A74-F248-11E8-B48F-1D18A9856A87
  last_name: Hrtyan
- first_name: Jie
  full_name: Wang, Jie
  last_name: Wang
- first_name: Juan L
  full_name: Aguilera Servin, Juan L
  id: 2A67C376-F248-11E8-B48F-1D18A9856A87
  last_name: Aguilera Servin
  orcid: 0000-0002-2862-8372
- first_name: Daniël
  full_name: van Damme, Daniël
  last_name: van Damme
- first_name: Emmanuel
  full_name: Beaurepaire, Emmanuel
  last_name: Beaurepaire
- first_name: Martin
  full_name: Loose, Martin
  id: 462D4284-F248-11E8-B48F-1D18A9856A87
  last_name: Loose
  orcid: 0000-0001-7309-9724
- first_name: Sebastian Y
  full_name: Bednarek, Sebastian Y
  last_name: Bednarek
- first_name: Jiří
  full_name: Friml, Jiří
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: Johnson AJ, Dahhan DA, Gnyliukh N, et al. The TPLATE complex mediates membrane
    bending during plant clathrin-mediated endocytosis. <i>Proceedings of the National
    Academy of Sciences</i>. 2021;118(51). doi:<a href="https://doi.org/10.1073/pnas.2113046118">10.1073/pnas.2113046118</a>
  apa: Johnson, A. J., Dahhan, D. A., Gnyliukh, N., Kaufmann, W., Zheden, V., Costanzo,
    T., … Friml, J. (2021). The TPLATE complex mediates membrane bending during plant
    clathrin-mediated endocytosis. <i>Proceedings of the National Academy of Sciences</i>.
    National Academy of Sciences. <a href="https://doi.org/10.1073/pnas.2113046118">https://doi.org/10.1073/pnas.2113046118</a>
  chicago: Johnson, Alexander J, Dana A Dahhan, Nataliia Gnyliukh, Walter Kaufmann,
    Vanessa Zheden, Tommaso Costanzo, Pierre Mahou, et al. “The TPLATE Complex Mediates
    Membrane Bending during Plant Clathrin-Mediated Endocytosis.” <i>Proceedings of
    the National Academy of Sciences</i>. National Academy of Sciences, 2021. <a href="https://doi.org/10.1073/pnas.2113046118">https://doi.org/10.1073/pnas.2113046118</a>.
  ieee: A. J. Johnson <i>et al.</i>, “The TPLATE complex mediates membrane bending
    during plant clathrin-mediated endocytosis,” <i>Proceedings of the National Academy
    of Sciences</i>, vol. 118, no. 51. National Academy of Sciences, 2021.
  ista: Johnson AJ, Dahhan DA, Gnyliukh N, Kaufmann W, Zheden V, Costanzo T, Mahou
    P, Hrtyan M, Wang J, Aguilera Servin JL, van Damme D, Beaurepaire E, Loose M,
    Bednarek SY, Friml J. 2021. The TPLATE complex mediates membrane bending during
    plant clathrin-mediated endocytosis. Proceedings of the National Academy of Sciences.
    118(51), e2113046118.
  mla: Johnson, Alexander J., et al. “The TPLATE Complex Mediates Membrane Bending
    during Plant Clathrin-Mediated Endocytosis.” <i>Proceedings of the National Academy
    of Sciences</i>, vol. 118, no. 51, e2113046118, National Academy of Sciences,
    2021, doi:<a href="https://doi.org/10.1073/pnas.2113046118">10.1073/pnas.2113046118</a>.
  short: A.J. Johnson, D.A. Dahhan, N. Gnyliukh, W. Kaufmann, V. Zheden, T. Costanzo,
    P. Mahou, M. Hrtyan, J. Wang, J.L. Aguilera Servin, D. van Damme, E. Beaurepaire,
    M. Loose, S.Y. Bednarek, J. Friml, Proceedings of the National Academy of Sciences
    118 (2021).
date_created: 2021-08-11T14:11:43Z
date_published: 2021-12-14T00:00:00Z
date_updated: 2024-02-19T11:06:09Z
day: '14'
ddc:
- '580'
department:
- _id: JiFr
- _id: MaLo
- _id: EvBe
- _id: EM-Fac
- _id: NanoFab
doi: 10.1073/pnas.2113046118
external_id:
  isi:
  - '000736417600043'
  pmid:
  - '34907016'
file:
- access_level: open_access
  checksum: 8d01e72e22c4fb1584e72d8601947069
  content_type: application/pdf
  creator: cchlebak
  date_created: 2021-12-15T08:59:40Z
  date_updated: 2021-12-15T08:59:40Z
  file_id: '10546'
  file_name: 2021_PNAS_Johnson.pdf
  file_size: 2757340
  relation: main_file
  success: 1
file_date_updated: 2021-12-15T08:59:40Z
has_accepted_license: '1'
intvolume: '       118'
isi: 1
issue: '51'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 26538374-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: I03630
  name: Molecular mechanisms of endocytic cargo recognition in plants
publication: Proceedings of the National Academy of Sciences
publication_identifier:
  eissn:
  - 1091-6490
publication_status: published
publisher: National Academy of Sciences
quality_controlled: '1'
related_material:
  link:
  - relation: earlier_version
    url: https://doi.org/10.1101/2021.04.26.441441
  record:
  - id: '14510'
    relation: dissertation_contains
    status: public
  - id: '14988'
    relation: research_data
    status: public
status: public
title: The TPLATE complex mediates membrane bending during plant clathrin-mediated
  endocytosis
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 118
year: '2021'
...
---
_id: '8787'
abstract:
- lang: eng
  text: Breakdown of vascular barriers is a major complication of inflammatory diseases.
    Anucleate platelets form blood-clots during thrombosis, but also play a crucial
    role in inflammation. While spatio-temporal dynamics of clot formation are well
    characterized, the cell-biological mechanisms of platelet recruitment to inflammatory
    micro-environments remain incompletely understood. Here we identify Arp2/3-dependent
    lamellipodia formation as a prominent morphological feature of immune-responsive
    platelets. Platelets use lamellipodia to scan for fibrin(ogen) deposited on the
    inflamed vasculature and to directionally spread, to polarize and to govern haptotactic
    migration along gradients of the adhesive ligand. Platelet-specific abrogation
    of Arp2/3 interferes with haptotactic repositioning of platelets to microlesions,
    thus impairing vascular sealing and provoking inflammatory microbleeding. During
    infection, haptotaxis promotes capture of bacteria and prevents hematogenic dissemination,
    rendering platelets gate-keepers of the inflamed microvasculature. Consequently,
    these findings identify haptotaxis as a key effector function of immune-responsive
    platelets.
acknowledgement: "We thank Sebastian Helmer, Nicole Blount, Christine Mann, and Beate
  Jantz for technical assistance; Hellen Ishikawa-Ankerhold for help and advice; Michael
  Sixt for critical\r\ndiscussions. This study was supported by the DFG SFB 914 (S.M.
  [B02 and Z01], K.Sch.\r\n[B02], B.W. [A02 and Z03], C.A.R. [B03], C.S. [A10], J.P.
  [Gerok position]), the DFG\r\nSFB 1123 (S.M. [B06]), the DFG FOR 2033 (S.M. and
  F.G.), the German Center for\r\nCardiovascular Research (DZHK) (Clinician Scientist
  Program [L.N.], MHA 1.4VD\r\n[S.M.], Postdoc Start-up Grant, 81×3600213 [F.G.]),
  FP7 program (project 260309,\r\nPRESTIGE [S.M.]), FöFoLe project 1015/1009 (L.N.),
  FöFoLe project 947 (F.G.), the\r\nFriedrich-Baur-Stiftung project 41/16 (F.G.),
  and LMUexcellence NFF (F.G.). This project has received funding from the European
  Research Council (ERC) under the European Union’s Horizon 2020 research and innovation
  program (grant agreement no.\r\n833440) (S.M.). F.G. received funding from the European
  Union’s Horizon 2020 research\r\nand innovation program under the Marie Skłodowska-Curie
  grant agreement no.\r\n747687."
article_number: '5778'
article_processing_charge: No
article_type: original
author:
- first_name: Leo
  full_name: Nicolai, Leo
  last_name: Nicolai
- first_name: Karin
  full_name: Schiefelbein, Karin
  last_name: Schiefelbein
- first_name: Silvia
  full_name: Lipsky, Silvia
  last_name: Lipsky
- first_name: Alexander
  full_name: Leunig, Alexander
  last_name: Leunig
- first_name: Marie
  full_name: Hoffknecht, Marie
  last_name: Hoffknecht
- first_name: Kami
  full_name: Pekayvaz, Kami
  last_name: Pekayvaz
- first_name: Ben
  full_name: Raude, Ben
  last_name: Raude
- first_name: Charlotte
  full_name: Marx, Charlotte
  last_name: Marx
- first_name: Andreas
  full_name: Ehrlich, Andreas
  last_name: Ehrlich
- first_name: Joachim
  full_name: Pircher, Joachim
  last_name: Pircher
- first_name: Zhe
  full_name: Zhang, Zhe
  last_name: Zhang
- first_name: Inas
  full_name: Saleh, Inas
  last_name: Saleh
- first_name: Anna-Kristina
  full_name: Marel, Anna-Kristina
  last_name: Marel
- first_name: Achim
  full_name: Löf, Achim
  last_name: Löf
- first_name: Tobias
  full_name: Petzold, Tobias
  last_name: Petzold
- first_name: Michael
  full_name: Lorenz, Michael
  last_name: Lorenz
- first_name: Konstantin
  full_name: Stark, Konstantin
  last_name: Stark
- first_name: Robert
  full_name: Pick, Robert
  last_name: Pick
- first_name: Gerhild
  full_name: Rosenberger, Gerhild
  last_name: Rosenberger
- first_name: Ludwig
  full_name: Weckbach, Ludwig
  last_name: Weckbach
- first_name: Bernd
  full_name: Uhl, Bernd
  last_name: Uhl
- first_name: Sheng
  full_name: Xia, Sheng
  last_name: Xia
- first_name: Christoph Andreas
  full_name: Reichel, Christoph Andreas
  last_name: Reichel
- first_name: Barbara
  full_name: Walzog, Barbara
  last_name: Walzog
- first_name: Christian
  full_name: Schulz, Christian
  last_name: Schulz
- first_name: Vanessa
  full_name: Zheden, Vanessa
  id: 39C5A68A-F248-11E8-B48F-1D18A9856A87
  last_name: Zheden
  orcid: 0000-0002-9438-4783
- first_name: Markus
  full_name: Bender, Markus
  last_name: Bender
- first_name: Rong
  full_name: Li, Rong
  last_name: Li
- first_name: Steffen
  full_name: Massberg, Steffen
  last_name: Massberg
- first_name: Florian R
  full_name: Gärtner, Florian R
  id: 397A88EE-F248-11E8-B48F-1D18A9856A87
  last_name: Gärtner
  orcid: 0000-0001-6120-3723
citation:
  ama: Nicolai L, Schiefelbein K, Lipsky S, et al. Vascular surveillance by haptotactic
    blood platelets in inflammation and infection. <i>Nature Communications</i>. 2020;11.
    doi:<a href="https://doi.org/10.1038/s41467-020-19515-0">10.1038/s41467-020-19515-0</a>
  apa: Nicolai, L., Schiefelbein, K., Lipsky, S., Leunig, A., Hoffknecht, M., Pekayvaz,
    K., … Gärtner, F. R. (2020). Vascular surveillance by haptotactic blood platelets
    in inflammation and infection. <i>Nature Communications</i>. Springer Nature.
    <a href="https://doi.org/10.1038/s41467-020-19515-0">https://doi.org/10.1038/s41467-020-19515-0</a>
  chicago: Nicolai, Leo, Karin Schiefelbein, Silvia Lipsky, Alexander Leunig, Marie
    Hoffknecht, Kami Pekayvaz, Ben Raude, et al. “Vascular Surveillance by Haptotactic
    Blood Platelets in Inflammation and Infection.” <i>Nature Communications</i>.
    Springer Nature, 2020. <a href="https://doi.org/10.1038/s41467-020-19515-0">https://doi.org/10.1038/s41467-020-19515-0</a>.
  ieee: L. Nicolai <i>et al.</i>, “Vascular surveillance by haptotactic blood platelets
    in inflammation and infection,” <i>Nature Communications</i>, vol. 11. Springer
    Nature, 2020.
  ista: Nicolai L, Schiefelbein K, Lipsky S, Leunig A, Hoffknecht M, Pekayvaz K, Raude
    B, Marx C, Ehrlich A, Pircher J, Zhang Z, Saleh I, Marel A-K, Löf A, Petzold T,
    Lorenz M, Stark K, Pick R, Rosenberger G, Weckbach L, Uhl B, Xia S, Reichel CA,
    Walzog B, Schulz C, Zheden V, Bender M, Li R, Massberg S, Gärtner FR. 2020. Vascular
    surveillance by haptotactic blood platelets in inflammation and infection. Nature
    Communications. 11, 5778.
  mla: Nicolai, Leo, et al. “Vascular Surveillance by Haptotactic Blood Platelets
    in Inflammation and Infection.” <i>Nature Communications</i>, vol. 11, 5778, Springer
    Nature, 2020, doi:<a href="https://doi.org/10.1038/s41467-020-19515-0">10.1038/s41467-020-19515-0</a>.
  short: L. Nicolai, K. Schiefelbein, S. Lipsky, A. Leunig, M. Hoffknecht, K. Pekayvaz,
    B. Raude, C. Marx, A. Ehrlich, J. Pircher, Z. Zhang, I. Saleh, A.-K. Marel, A.
    Löf, T. Petzold, M. Lorenz, K. Stark, R. Pick, G. Rosenberger, L. Weckbach, B.
    Uhl, S. Xia, C.A. Reichel, B. Walzog, C. Schulz, V. Zheden, M. Bender, R. Li,
    S. Massberg, F.R. Gärtner, Nature Communications 11 (2020).
date_created: 2020-11-22T23:01:23Z
date_published: 2020-11-13T00:00:00Z
date_updated: 2023-08-22T13:26:26Z
day: '13'
ddc:
- '570'
department:
- _id: MiSi
- _id: EM-Fac
doi: 10.1038/s41467-020-19515-0
ec_funded: 1
external_id:
  isi:
  - '000594648000014'
  pmid:
  - '33188196'
file:
- access_level: open_access
  checksum: 485b7b6cf30198ba0ce126491a28f125
  content_type: application/pdf
  creator: dernst
  date_created: 2020-11-23T13:29:49Z
  date_updated: 2020-11-23T13:29:49Z
  file_id: '8798'
  file_name: 2020_NatureComm_Nicolai.pdf
  file_size: 7035340
  relation: main_file
  success: 1
file_date_updated: 2020-11-23T13:29:49Z
has_accepted_license: '1'
intvolume: '        11'
isi: 1
language:
- iso: eng
month: '11'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 260AA4E2-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '747687'
  name: Mechanical Adaptation of Lamellipodial Actin Networks in Migrating Cells
publication: Nature Communications
publication_identifier:
  eissn:
  - '20411723'
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  link:
  - relation: erratum
    url: https://doi.org/10.1038/s41467-022-31310-7
scopus_import: '1'
status: public
title: Vascular surveillance by haptotactic blood platelets in inflammation and infection
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 11
year: '2020'
...
---
_id: '7406'
abstract:
- lang: eng
  text: "Background\r\nSynaptic vesicles (SVs) are an integral part of the neurotransmission
    machinery, and isolation of SVs from their host neuron is necessary to reveal
    their most fundamental biochemical and functional properties in in vitro assays.
    Isolated SVs from neurons that have been genetically engineered, e.g. to introduce
    genetically encoded indicators, are not readily available but would permit new
    insights into SV structure and function. Furthermore, it is unclear if cultured
    neurons can provide sufficient starting material for SV isolation procedures.\r\n\r\nNew
    method\r\nHere, we demonstrate an efficient ex vivo procedure to obtain functional
    SVs from cultured rat cortical neurons after genetic engineering with a lentivirus.\r\n\r\nResults\r\nWe
    show that ∼108 plated cortical neurons allow isolation of suitable SV amounts
    for functional analysis and imaging. We found that SVs isolated from cultured
    neurons have neurotransmitter uptake comparable to that of SVs isolated from intact
    cortex. Using total internal reflection fluorescence (TIRF) microscopy, we visualized
    an exogenous SV-targeted marker protein and demonstrated the high efficiency of
    SV modification.\r\n\r\nComparison with existing methods\r\nObtaining SVs from
    genetically engineered neurons currently generally requires the availability of
    transgenic animals, which is constrained by technical (e.g. cost and time) and
    biological (e.g. developmental defects and lethality) limitations.\r\n\r\nConclusions\r\nThese
    results demonstrate the modification and isolation of functional SVs using cultured
    neurons and viral transduction. The ability to readily obtain SVs from genetically
    engineered neurons will permit linking in situ studies to in vitro experiments
    in a variety of genetic contexts."
acknowledged_ssus:
- _id: Bio
- _id: EM-Fac
article_processing_charge: No
article_type: original
author:
- first_name: Catherine
  full_name: Mckenzie, Catherine
  id: 3EEDE19A-F248-11E8-B48F-1D18A9856A87
  last_name: Mckenzie
- first_name: Miroslava
  full_name: Spanova, Miroslava
  id: 44A924DC-F248-11E8-B48F-1D18A9856A87
  last_name: Spanova
- first_name: Alexander J
  full_name: Johnson, Alexander J
  id: 46A62C3A-F248-11E8-B48F-1D18A9856A87
  last_name: Johnson
  orcid: 0000-0002-2739-8843
- first_name: Stephanie
  full_name: Kainrath, Stephanie
  id: 32CFBA64-F248-11E8-B48F-1D18A9856A87
  last_name: Kainrath
- first_name: Vanessa
  full_name: Zheden, Vanessa
  id: 39C5A68A-F248-11E8-B48F-1D18A9856A87
  last_name: Zheden
  orcid: 0000-0002-9438-4783
- first_name: Harald H.
  full_name: Sitte, Harald H.
  last_name: Sitte
- first_name: Harald L
  full_name: Janovjak, Harald L
  id: 33BA6C30-F248-11E8-B48F-1D18A9856A87
  last_name: Janovjak
  orcid: 0000-0002-8023-9315
citation:
  ama: Mckenzie C, Spanova M, Johnson AJ, et al. Isolation of synaptic vesicles from
    genetically engineered cultured neurons. <i>Journal of Neuroscience Methods</i>.
    2019;312:114-121. doi:<a href="https://doi.org/10.1016/j.jneumeth.2018.11.018">10.1016/j.jneumeth.2018.11.018</a>
  apa: Mckenzie, C., Spanova, M., Johnson, A. J., Kainrath, S., Zheden, V., Sitte,
    H. H., &#38; Janovjak, H. L. (2019). Isolation of synaptic vesicles from genetically
    engineered cultured neurons. <i>Journal of Neuroscience Methods</i>. Elsevier.
    <a href="https://doi.org/10.1016/j.jneumeth.2018.11.018">https://doi.org/10.1016/j.jneumeth.2018.11.018</a>
  chicago: Mckenzie, Catherine, Miroslava Spanova, Alexander J Johnson, Stephanie
    Kainrath, Vanessa Zheden, Harald H. Sitte, and Harald L Janovjak. “Isolation of
    Synaptic Vesicles from Genetically Engineered Cultured Neurons.” <i>Journal of
    Neuroscience Methods</i>. Elsevier, 2019. <a href="https://doi.org/10.1016/j.jneumeth.2018.11.018">https://doi.org/10.1016/j.jneumeth.2018.11.018</a>.
  ieee: C. Mckenzie <i>et al.</i>, “Isolation of synaptic vesicles from genetically
    engineered cultured neurons,” <i>Journal of Neuroscience Methods</i>, vol. 312.
    Elsevier, pp. 114–121, 2019.
  ista: Mckenzie C, Spanova M, Johnson AJ, Kainrath S, Zheden V, Sitte HH, Janovjak
    HL. 2019. Isolation of synaptic vesicles from genetically engineered cultured
    neurons. Journal of Neuroscience Methods. 312, 114–121.
  mla: Mckenzie, Catherine, et al. “Isolation of Synaptic Vesicles from Genetically
    Engineered Cultured Neurons.” <i>Journal of Neuroscience Methods</i>, vol. 312,
    Elsevier, 2019, pp. 114–21, doi:<a href="https://doi.org/10.1016/j.jneumeth.2018.11.018">10.1016/j.jneumeth.2018.11.018</a>.
  short: C. Mckenzie, M. Spanova, A.J. Johnson, S. Kainrath, V. Zheden, H.H. Sitte,
    H.L. Janovjak, Journal of Neuroscience Methods 312 (2019) 114–121.
date_created: 2020-01-30T09:12:19Z
date_published: 2019-01-15T00:00:00Z
date_updated: 2023-09-06T15:27:29Z
day: '15'
department:
- _id: HaJa
- _id: Bio
doi: 10.1016/j.jneumeth.2018.11.018
ec_funded: 1
external_id:
  isi:
  - '000456220900013'
  pmid:
  - '30496761'
intvolume: '       312'
isi: 1
language:
- iso: eng
month: '01'
oa_version: None
page: 114-121
pmid: 1
project:
- _id: 25548C20-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '303564'
  name: Microbial Ion Channels for Synthetic Neurobiology
- _id: 26538374-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: I03630
  name: Molecular mechanisms of endocytic cargo recognition in plants
- _id: 2548AE96-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: W1232-B24
  name: Molecular Drug Targets
publication: Journal of Neuroscience Methods
publication_identifier:
  issn:
  - 0165-0270
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Isolation of synaptic vesicles from genetically engineered cultured neurons
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 312
year: '2019'
...
---
_id: '6087'
abstract:
- lang: eng
  text: Cell fate specification by lateral inhibition typically involves contact signaling
    through the Delta-Notch signaling pathway. However, whether this is the only signaling
    mode mediating lateral inhibition remains unclear. Here we show that in zebrafish
    oogenesis, a group of cells within the granulosa cell layer at the oocyte animal
    pole acquire elevated levels of the transcriptional coactivator TAZ in their nuclei.
    One of these cells, the future micropyle precursor cell (MPC), accumulates increasingly
    high levels of nuclear TAZ and grows faster than its surrounding cells, mechanically
    compressing those cells, which ultimately lose TAZ from their nuclei. Strikingly,
    relieving neighbor-cell compression by MPC ablation or aspiration restores nuclear
    TAZ accumulation in neighboring cells, eventually leading to MPC re-specification
    from these cells. Conversely, MPC specification is defective in taz−/− follicles.
    These findings uncover a novel mode of lateral inhibition in cell fate specification
    based on mechanical signals controlling TAZ activity.
acknowledged_ssus:
- _id: Bio
- _id: EM-Fac
- _id: LifeSc
acknowledgement: We thank Roland Dosch, Makoto Furutani-Seiki, Brian Link, Mary Mullins,
  and Masazumi Tada for providing transgenic and/or mutant zebrafish lines; Alexandra
  Schauer, Shayan Shami-Pour, and the rest of the Heisenberg lab for technical assistance
  and feedback on the manuscript; and the Bioimaging, Electron Microscopy, and Zebrafish
  facilities of IST Austria for continuous support. This work was supported by an
  ERC advanced grant ( MECSPEC to C.-P.H.).
article_processing_charge: No
article_type: original
author:
- first_name: Peng
  full_name: Xia, Peng
  id: 4AB6C7D0-F248-11E8-B48F-1D18A9856A87
  last_name: Xia
  orcid: 0000-0002-5419-7756
- first_name: Daniel J
  full_name: Gütl, Daniel J
  id: 381929CE-F248-11E8-B48F-1D18A9856A87
  last_name: Gütl
- first_name: Vanessa
  full_name: Zheden, Vanessa
  id: 39C5A68A-F248-11E8-B48F-1D18A9856A87
  last_name: Zheden
  orcid: 0000-0002-9438-4783
- first_name: Carl-Philipp J
  full_name: Heisenberg, Carl-Philipp J
  id: 39427864-F248-11E8-B48F-1D18A9856A87
  last_name: Heisenberg
  orcid: 0000-0002-0912-4566
citation:
  ama: Xia P, Gütl DJ, Zheden V, Heisenberg C-PJ. Lateral inhibition in cell specification
    mediated by mechanical signals modulating TAZ activity. <i>Cell</i>. 2019;176(6):1379-1392.e14.
    doi:<a href="https://doi.org/10.1016/j.cell.2019.01.019">10.1016/j.cell.2019.01.019</a>
  apa: Xia, P., Gütl, D. J., Zheden, V., &#38; Heisenberg, C.-P. J. (2019). Lateral
    inhibition in cell specification mediated by mechanical signals modulating TAZ
    activity. <i>Cell</i>. Elsevier. <a href="https://doi.org/10.1016/j.cell.2019.01.019">https://doi.org/10.1016/j.cell.2019.01.019</a>
  chicago: Xia, Peng, Daniel J Gütl, Vanessa Zheden, and Carl-Philipp J Heisenberg.
    “Lateral Inhibition in Cell Specification Mediated by Mechanical Signals Modulating
    TAZ Activity.” <i>Cell</i>. Elsevier, 2019. <a href="https://doi.org/10.1016/j.cell.2019.01.019">https://doi.org/10.1016/j.cell.2019.01.019</a>.
  ieee: P. Xia, D. J. Gütl, V. Zheden, and C.-P. J. Heisenberg, “Lateral inhibition
    in cell specification mediated by mechanical signals modulating TAZ activity,”
    <i>Cell</i>, vol. 176, no. 6. Elsevier, p. 1379–1392.e14, 2019.
  ista: Xia P, Gütl DJ, Zheden V, Heisenberg C-PJ. 2019. Lateral inhibition in cell
    specification mediated by mechanical signals modulating TAZ activity. Cell. 176(6),
    1379–1392.e14.
  mla: Xia, Peng, et al. “Lateral Inhibition in Cell Specification Mediated by Mechanical
    Signals Modulating TAZ Activity.” <i>Cell</i>, vol. 176, no. 6, Elsevier, 2019,
    p. 1379–1392.e14, doi:<a href="https://doi.org/10.1016/j.cell.2019.01.019">10.1016/j.cell.2019.01.019</a>.
  short: P. Xia, D.J. Gütl, V. Zheden, C.-P.J. Heisenberg, Cell 176 (2019) 1379–1392.e14.
date_created: 2019-03-10T22:59:19Z
date_published: 2019-03-07T00:00:00Z
date_updated: 2023-08-25T08:02:23Z
day: '07'
department:
- _id: CaHe
- _id: EM-Fac
doi: 10.1016/j.cell.2019.01.019
ec_funded: 1
external_id:
  isi:
  - '000460509600013'
  pmid:
  - '30773315'
intvolume: '       176'
isi: 1
issue: '6'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1016/j.cell.2019.01.019
month: '03'
oa: 1
oa_version: Published Version
page: 1379-1392.e14
pmid: 1
project:
- _id: 260F1432-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '742573'
  name: Interaction and feedback between cell mechanics and fate specification in
    vertebrate gastrulation
publication: Cell
publication_status: published
publisher: Elsevier
quality_controlled: '1'
related_material:
  link:
  - description: News on IST Homepage
    relation: press_release
    url: https://ist.ac.at/en/news/in-zebrafish-eggs-most-rapidly-growing-cell-inhibits-its-neighbours-through-mechanical-signals/
scopus_import: '1'
status: public
title: Lateral inhibition in cell specification mediated by mechanical signals modulating
  TAZ activity
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 176
year: '2019'
...
