@article{11446,
  abstract     = {Suppose that n is not a prime power and not twice a prime power. We prove that for any Hausdorff compactum X with a free action of the symmetric group Sn, there exists an Sn-equivariant map X→Rn whose image avoids the diagonal {(x,x,…,x)∈Rn∣x∈R}. Previously, the special cases of this statement for certain X were usually proved using the equivartiant obstruction theory. Such calculations are difficult and may become infeasible past the first (primary) obstruction. We take a different approach which allows us to prove the vanishing of all obstructions simultaneously. The essential step in the proof is classifying the possible degrees of Sn-equivariant maps from the boundary ∂Δn−1 of (n−1)-simplex to itself. Existence of equivariant maps between spaces is important for many questions arising from discrete mathematics and geometry, such as Kneser’s conjecture, the Square Peg conjecture, the Splitting Necklace problem, and the Topological Tverberg conjecture, etc. We demonstrate the utility of our result applying it to one such question, a specific instance of envy-free division problem.},
  author       = {Avvakumov, Sergey and Kudrya, Sergey},
  issn         = {1432-0444},
  journal      = {Discrete & Computational Geometry},
  keywords     = {Computational Theory and Mathematics, Discrete Mathematics and Combinatorics, Geometry and Topology, Theoretical Computer Science},
  number       = {3},
  pages        = {1202--1216},
  publisher    = {Springer Nature},
  title        = {{Vanishing of all equivariant obstructions and the mapping degree}},
  doi          = {10.1007/s00454-021-00299-z},
  volume       = {66},
  year         = {2021},
}

@article{10220,
  abstract     = {We study conditions under which a finite simplicial complex K can be mapped to ℝd without higher-multiplicity intersections. An almost r-embedding is a map f: K → ℝd such that the images of any r pairwise disjoint simplices of K do not have a common point. We show that if r is not a prime power and d ≥ 2r + 1, then there is a counterexample to the topological Tverberg conjecture, i.e., there is an almost r-embedding of the (d +1)(r − 1)-simplex in ℝd. This improves on previous constructions of counterexamples (for d ≥ 3r) based on a series of papers by M. Özaydin, M. Gromov, P. Blagojević, F. Frick, G. Ziegler, and the second and fourth present authors.

The counterexamples are obtained by proving the following algebraic criterion in codimension 2: If r ≥ 3 and if K is a finite 2(r − 1)-complex, then there exists an almost r-embedding K → ℝ2r if and only if there exists a general position PL map f: K → ℝ2r such that the algebraic intersection number of the f-images of any r pairwise disjoint simplices of K is zero. This result can be restated in terms of a cohomological obstruction and extends an analogous codimension 3 criterion by the second and fourth authors. As another application, we classify ornaments f: S3 ⊔ S3 ⊔ S3 → ℝ5 up to ornament concordance.

It follows from work of M. Freedman, V. Krushkal and P. Teichner that the analogous criterion for r = 2 is false. We prove a lemma on singular higher-dimensional Borromean rings, yielding an elementary proof of the counterexample.},
  author       = {Avvakumov, Sergey and Mabillard, Isaac and Skopenkov, Arkadiy B. and Wagner, Uli},
  issn         = {1565-8511},
  journal      = {Israel Journal of Mathematics},
  pages        = {501–534 },
  publisher    = {Springer Nature},
  title        = {{Eliminating higher-multiplicity intersections. III. Codimension 2}},
  doi          = {10.1007/s11856-021-2216-z},
  volume       = {245},
  year         = {2021},
}

@inproceedings{7991,
  abstract     = {We define and study a discrete process that generalizes the convex-layer decomposition of a planar point set. Our process, which we call homotopic curve shortening (HCS), starts with a closed curve (which might self-intersect) in the presence of a set P⊂ ℝ² of point obstacles, and evolves in discrete steps, where each step consists of (1) taking shortcuts around the obstacles, and (2) reducing the curve to its shortest homotopic equivalent. We find experimentally that, if the initial curve is held fixed and P is chosen to be either a very fine regular grid or a uniformly random point set, then HCS behaves at the limit like the affine curve-shortening flow (ACSF). This connection between HCS and ACSF generalizes the link between "grid peeling" and the ACSF observed by Eppstein et al. (2017), which applied only to convex curves, and which was studied only for regular grids. We prove that HCS satisfies some properties analogous to those of ACSF: HCS is invariant under affine transformations, preserves convexity, and does not increase the total absolute curvature. Furthermore, the number of self-intersections of a curve, or intersections between two curves (appropriately defined), does not increase. Finally, if the initial curve is simple, then the number of inflection points (appropriately defined) does not increase.},
  author       = {Avvakumov, Sergey and Nivasch, Gabriel},
  booktitle    = {36th International Symposium on Computational Geometry},
  isbn         = {9783959771436},
  issn         = {18688969},
  location     = {Zürich, Switzerland},
  publisher    = {Schloss Dagstuhl - Leibniz-Zentrum für Informatik},
  title        = {{Homotopic curve shortening and the affine curve-shortening flow}},
  doi          = {10.4230/LIPIcs.SoCG.2020.12},
  volume       = {164},
  year         = {2020},
}

@phdthesis{8156,
  abstract     = {We present solutions to several problems originating from geometry and discrete mathematics: existence of equipartitions, maps without Tverberg multiple points, and inscribing quadrilaterals. Equivariant obstruction theory is the natural topological approach to these type of questions. However, for the specific problems we consider it had yielded only partial or no results. We get our results by complementing equivariant obstruction theory with other techniques from topology and geometry.},
  author       = {Avvakumov, Sergey},
  issn         = {2663-337X},
  pages        = {119},
  publisher    = {Institute of Science and Technology Austria},
  title        = {{Topological methods in geometry and discrete mathematics}},
  doi          = {10.15479/AT:ISTA:8156},
  year         = {2020},
}

@article{9308,
  author       = {Avvakumov, Sergey and Wagner, Uli and Mabillard, Isaac and Skopenkov, A. B.},
  issn         = {0036-0279},
  journal      = {Russian Mathematical Surveys},
  number       = {6},
  pages        = {1156--1158},
  publisher    = {IOP Publishing},
  title        = {{Eliminating higher-multiplicity intersections, III. Codimension 2}},
  doi          = {10.1070/RM9943},
  volume       = {75},
  year         = {2020},
}

@unpublished{8182,
  abstract     = {Suppose that $n\neq p^k$ and $n\neq 2p^k$ for all $k$ and all primes $p$. We prove that for any Hausdorff compactum $X$ with a free action of the symmetric group $\mathfrak S_n$ there exists an $\mathfrak S_n$-equivariant map $X \to
{\mathbb R}^n$ whose image avoids the diagonal $\{(x,x\dots,x)\in {\mathbb R}^n|x\in {\mathbb R}\}$.
  Previously, the special cases of this statement for certain $X$ were usually proved using the equivartiant obstruction theory. Such calculations are difficult and may become infeasible past the first (primary) obstruction. We
take a different approach which allows us to prove the vanishing of all obstructions simultaneously. The essential step in the proof is classifying the possible degrees of $\mathfrak S_n$-equivariant maps from the boundary
$\partial\Delta^{n-1}$ of $(n-1)$-simplex to itself.  Existence of equivariant maps between spaces is important for many questions arising from discrete mathematics and geometry, such as Kneser's conjecture, the Square Peg conjecture, the Splitting Necklace problem, and the Topological Tverberg conjecture, etc. We demonstrate the utility of our result  applying it to one such question, a specific instance of envy-free division problem.},
  author       = {Avvakumov, Sergey and Kudrya, Sergey},
  booktitle    = {arXiv},
  publisher    = {arXiv},
  title        = {{Vanishing of all equivariant obstructions and the mapping degree}},
  year         = {2019},
}

@unpublished{8184,
  abstract     = {Denote by ∆N the N-dimensional simplex. A map f : ∆N → Rd is an almost r-embedding if fσ1∩. . .∩fσr = ∅ whenever σ1, . . . , σr are pairwise disjoint faces. A counterexample to the topological Tverberg conjecture asserts that if r is not a prime power and d ≥ 2r + 1, then there is an almost r-embedding ∆(d+1)(r−1) → Rd. This was improved by Blagojevi´c–Frick–Ziegler using a simple construction of higher-dimensional counterexamples by taking k-fold join power of lower-dimensional ones. We improve this further (for d large compared to r): If r is not a prime power and N := (d+ 1)r−r l
d + 2 r + 1 m−2, then there is an almost r-embedding ∆N → Rd. For the r-fold van Kampen–Flores conjecture we also produce counterexamples which are stronger than previously known. Our proof is based on generalizations of the Mabillard–Wagner theorem on construction of almost r-embeddings from equivariant maps, and of the Ozaydin theorem on existence of equivariant maps. },
  author       = {Avvakumov, Sergey and Karasev, R. and Skopenkov, A.},
  booktitle    = {arXiv},
  publisher    = {arXiv},
  title        = {{Stronger counterexamples to the topological Tverberg conjecture}},
  year         = {2019},
}

@unpublished{8185,
  abstract     = {In this paper we study envy-free division problems. The classical approach to some of such problems, used by David Gale, reduces to considering continuous maps of a simplex to itself and finding sufficient conditions when this map hits the center of the simplex. The mere continuity is not sufficient for such a conclusion, the usual assumption (for example, in the Knaster--Kuratowski--Mazurkiewicz and the Gale theorem) is a certain boundary condition.
  We follow Erel Segal-Halevi, Fr\'ed\'eric Meunier, and Shira Zerbib, and replace the boundary condition by another assumption, which has the economic meaning of possibility for a player to prefer an empty part in the segment
partition problem. We solve the problem positively when $n$, the number of players that divide the segment, is a prime power, and we provide counterexamples for every $n$ which is not a prime power. We also provide counterexamples relevant to a wider class of fair or envy-free partition problems when $n$ is odd and not a prime power.},
  author       = {Avvakumov, Sergey and Karasev, Roman},
  booktitle    = {arXiv},
  title        = {{Envy-free division using mapping degree}},
  doi          = {10.48550/arXiv.1907.11183},
  year         = {2019},
}

@article{6419,
  abstract     = {Characterizing the fitness landscape, a representation of fitness for a large set of genotypes, is key to understanding how genetic information is interpreted to create functional organisms. Here we determined the evolutionarily-relevant segment of the fitness landscape of His3, a gene coding for an enzyme in the histidine synthesis pathway, focusing on combinations of amino acid states found at orthologous sites of extant species. Just 15% of amino acids found in yeast His3 orthologues were always neutral while the impact on fitness of the remaining 85% depended on the genetic background. Furthermore, at 67% of sites, amino acid replacements were under sign epistasis, having both strongly positive and negative effect in different genetic backgrounds. 46% of sites were under reciprocal sign epistasis. The fitness impact of amino acid replacements was influenced by only a few genetic backgrounds but involved interaction of multiple sites, shaping a rugged fitness landscape in which many of the shortest paths between highly fit genotypes are inaccessible.},
  author       = {Pokusaeva, Victoria and Usmanova, Dinara R. and Putintseva, Ekaterina V. and Espinar, Lorena and Sarkisyan, Karen and Mishin, Alexander S. and Bogatyreva, Natalya S. and Ivankov, Dmitry and Akopyan, Arseniy and Avvakumov, Sergey and Povolotskaya, Inna S. and Filion, Guillaume J. and Carey, Lucas B. and Kondrashov, Fyodor},
  issn         = {15537404},
  journal      = {PLoS Genetics},
  number       = {4},
  publisher    = {Public Library of Science},
  title        = {{An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape}},
  doi          = {10.1371/journal.pgen.1008079},
  volume       = {15},
  year         = {2019},
}

@misc{9789,
  author       = {Pokusaeva, Victoria and Usmanova, Dinara R. and Putintseva, Ekaterina V. and Espinar, Lorena and Sarkisyan, Karen and Mishin, Alexander S. and Bogatyreva, Natalya S. and Ivankov, Dmitry and Akopyan, Arseniy and Avvakumov, Sergey and Povolotskaya, Inna S. and Filion, Guillaume J. and Carey, Lucas B. and Kondrashov, Fyodor},
  publisher    = {Public Library of Science},
  title        = {{Multiple alignment of His3 orthologues}},
  doi          = {10.1371/journal.pgen.1008079.s010},
  year         = {2019},
}

@misc{9790,
  author       = {Pokusaeva, Victoria and Usmanova, Dinara R. and Putintseva, Ekaterina V. and Espinar, Lorena and Sarkisyan, Karen and Mishin, Alexander S. and Bogatyreva, Natalya S. and Ivankov, Dmitry and Akopyan, Arseniy and Avvakumov, Sergey and Povolotskaya, Inna S. and Filion, Guillaume J. and Carey, Lucas B. and Kondrashov, Fyodor},
  publisher    = {Public Library of Science},
  title        = {{A statistical summary of segment libraries and sequencing results}},
  doi          = {10.1371/journal.pgen.1008079.s011},
  year         = {2019},
}

@unpublished{75,
  abstract     = {We prove that any convex body in the plane can be partitioned into m convex parts of equal areas and perimeters for any integer m≥2; this result was previously known for prime powers m=pk. We also give a higher-dimensional generalization.},
  author       = {Akopyan, Arseniy and Avvakumov, Sergey and Karasev, Roman},
  publisher    = {arXiv},
  title        = {{Convex fair partitions into arbitrary number of pieces}},
  doi          = {10.48550/arXiv.1804.03057},
  year         = {2018},
}

@article{6355,
  abstract     = {We  prove  that  any  cyclic  quadrilateral  can  be  inscribed  in  any  closed  convex C1-curve.  The smoothness condition is not required if the quadrilateral is a rectangle.},
  author       = {Akopyan, Arseniy and Avvakumov, Sergey},
  issn         = {2050-5094},
  journal      = {Forum of Mathematics, Sigma},
  publisher    = {Cambridge University Press},
  title        = {{Any cyclic quadrilateral can be inscribed in any closed convex smooth curve}},
  doi          = {10.1017/fms.2018.7},
  volume       = {6},
  year         = {2018},
}

@article{1522,
  abstract     = {We classify smooth Brunnian (i.e., unknotted on both components) embeddings (S2 × S1) ⊔ S3 → ℝ6. Any Brunnian embedding (S2 × S1) ⊔ S3 → ℝ6 is isotopic to an explicitly constructed embedding fk,m,n for some integers k, m, n such that m ≡ n (mod 2). Two embeddings fk,m,n and fk′ ,m′,n′ are isotopic if and only if k = k′, m ≡ m′ (mod 2k) and n ≡ n′ (mod 2k). We use Haefliger’s classification of embeddings S3 ⊔ S3 → ℝ6 in our proof. The relation between the embeddings (S2 × S1) ⊔ S3 → ℝ6 and S3 ⊔ S3 → ℝ6 is not trivial, however. For example, we show that there exist embeddings f: (S2 ×S1) ⊔ S3 → ℝ6 and g, g′ : S3 ⊔ S3 → ℝ6 such that the componentwise embedded connected sum f # g is isotopic to f # g′ but g is not isotopic to g′.},
  author       = {Avvakumov, Serhii},
  issn         = {1609-4514},
  journal      = {Moscow Mathematical Journal},
  number       = {1},
  pages        = {1 -- 25},
  publisher    = {Independent University of Moscow},
  title        = {{The classification of certain linked 3-manifolds in 6-space}},
  doi          = {10.17323/1609-4514-2016-16-1-1-25},
  volume       = {16},
  year         = {2016},
}

@unpublished{8183,
  abstract     = {We study conditions under which a finite simplicial complex $K$ can be mapped to $\mathbb R^d$ without higher-multiplicity intersections. An almost $r$-embedding is a map $f: K\to \mathbb R^d$ such that the images of any $r$
pairwise disjoint simplices of $K$ do not have a common point. We show that if $r$ is not a prime power and $d\geq 2r+1$, then there is a counterexample to the topological Tverberg conjecture, i.e., there is an almost $r$-embedding of
the $(d+1)(r-1)$-simplex in $\mathbb R^d$. This improves on previous constructions of counterexamples (for $d\geq 3r$) based on a series of papers by M. \"Ozaydin, M. Gromov, P. Blagojevi\'c, F. Frick, G. Ziegler, and the second and fourth present authors. The counterexamples are obtained by proving the following algebraic criterion in codimension 2: If $r\ge3$ and if $K$ is a finite $2(r-1)$-complex then there exists an almost $r$-embedding $K\to \mathbb R^{2r}$ if and only if there exists a general position PL map $f:K\to \mathbb R^{2r}$ such that the algebraic intersection number of the $f$-images of any $r$ pairwise disjoint simplices of $K$ is zero. This result can be restated in terms of cohomological obstructions or equivariant maps, and extends an analogous codimension 3 criterion by the second and fourth authors. As another application we classify ornaments $f:S^3 \sqcup S^3\sqcup S^3\to \mathbb R^5$ up to ornament
concordance. It follows from work of M. Freedman, V. Krushkal and P. Teichner that the analogous criterion for $r=2$ is false. We prove a lemma on singular higher-dimensional Borromean rings, yielding an elementary proof of the counterexample.},
  author       = {Avvakumov, Sergey and Mabillard, Isaac and Skopenkov, A. and Wagner, Uli},
  booktitle    = {arXiv},
  title        = {{Eliminating higher-multiplicity intersections, III. Codimension 2}},
  year         = {2015},
}

