---
_id: '10167'
abstract:
- lang: eng
  text: Schistosomes, the human parasites responsible for snail fever, are female-heterogametic.
    Different parts of their ZW sex chromosomes have stopped recombining in distinct
    lineages, creating “evolutionary strata” of various ages. Although the Z-chromosome
    is well characterized at the genomic and molecular level, the W-chromosome has
    remained largely unstudied from an evolutionary perspective, as only a few W-linked
    genes have been detected outside of the model species Schistosoma mansoni. Here,
    we characterize the gene content and evolution of the W-chromosomes of S. mansoni
    and of the divergent species S. japonicum. We use a combined RNA/DNA k-mer based
    pipeline to assemble around 100 candidate W-specific transcripts in each of the
    species. About half of them map to known protein coding genes, the majority homologous
    to S. mansoni Z-linked genes. We perform an extended analysis of the evolutionary
    strata present in the two species (including characterizing a previously undetected
    young stratum in S. japonicum) to infer patterns of sequence and expression evolution
    of W-linked genes at different time points after recombination was lost. W-linked
    genes show evidence of degeneration, including high rates of protein evolution
    and reduced expression. Most are found in young lineage-specific strata, with
    only a few high expression ancestral W-genes remaining, consistent with the progressive
    erosion of nonrecombining regions. Among these, the splicing factor u2af2 stands
    out as a promising candidate for primary sex determination, opening new avenues
    for understanding the molecular basis of the reproductive biology of this group.
acknowledged_ssus:
- _id: ScienComp
acknowledgement: The authors thank IT support at IST Austria for providing an optimal
  environment for bioinformatic analyses. This work was supported by an Austrian Science
  Foundation FWF grant (Project P28842) to B.V.
article_processing_charge: No
article_type: original
author:
- first_name: Marwan N
  full_name: Elkrewi, Marwan N
  id: 0B46FACA-A8E1-11E9-9BD3-79D1E5697425
  last_name: Elkrewi
  orcid: 0000-0002-5328-7231
- first_name: Mikhail A.
  full_name: Moldovan, Mikhail A.
  id: c8bb7f32-3315-11ec-b58b-e5950e6c14a0
  last_name: Moldovan
  orcid: 0000-0002-8876-6494
- first_name: Marion A L
  full_name: Picard, Marion A L
  id: 2C921A7A-F248-11E8-B48F-1D18A9856A87
  last_name: Picard
  orcid: 0000-0002-8101-2518
- first_name: Beatriz
  full_name: Vicoso, Beatriz
  id: 49E1C5C6-F248-11E8-B48F-1D18A9856A87
  last_name: Vicoso
  orcid: 0000-0002-4579-8306
citation:
  ama: Elkrewi MN, Moldovan MA, Picard MAL, Vicoso B. Schistosome W-Linked genes inform
    temporal dynamics of sex chromosome evolution and suggest candidate for sex determination.
    <i>Molecular Biology and Evolution</i>. 2021. doi:<a href="https://doi.org/10.1093/molbev/msab178">10.1093/molbev/msab178</a>
  apa: Elkrewi, M. N., Moldovan, M. A., Picard, M. A. L., &#38; Vicoso, B. (2021).
    Schistosome W-Linked genes inform temporal dynamics of sex chromosome evolution
    and suggest candidate for sex determination. <i>Molecular Biology and Evolution</i>.
    Oxford University Press . <a href="https://doi.org/10.1093/molbev/msab178">https://doi.org/10.1093/molbev/msab178</a>
  chicago: Elkrewi, Marwan N, Mikhail A. Moldovan, Marion A L Picard, and Beatriz
    Vicoso. “Schistosome W-Linked Genes Inform Temporal Dynamics of Sex Chromosome
    Evolution and Suggest Candidate for Sex Determination.” <i>Molecular Biology and
    Evolution</i>. Oxford University Press , 2021. <a href="https://doi.org/10.1093/molbev/msab178">https://doi.org/10.1093/molbev/msab178</a>.
  ieee: M. N. Elkrewi, M. A. Moldovan, M. A. L. Picard, and B. Vicoso, “Schistosome
    W-Linked genes inform temporal dynamics of sex chromosome evolution and suggest
    candidate for sex determination,” <i>Molecular Biology and Evolution</i>. Oxford
    University Press , 2021.
  ista: Elkrewi MN, Moldovan MA, Picard MAL, Vicoso B. 2021. Schistosome W-Linked
    genes inform temporal dynamics of sex chromosome evolution and suggest candidate
    for sex determination. Molecular Biology and Evolution.
  mla: Elkrewi, Marwan N., et al. “Schistosome W-Linked Genes Inform Temporal Dynamics
    of Sex Chromosome Evolution and Suggest Candidate for Sex Determination.” <i>Molecular
    Biology and Evolution</i>, Oxford University Press , 2021, doi:<a href="https://doi.org/10.1093/molbev/msab178">10.1093/molbev/msab178</a>.
  short: M.N. Elkrewi, M.A. Moldovan, M.A.L. Picard, B. Vicoso, Molecular Biology
    and Evolution (2021).
date_created: 2021-10-21T07:49:12Z
date_published: 2021-06-19T00:00:00Z
date_updated: 2023-08-14T08:03:06Z
day: '19'
ddc:
- '610'
department:
- _id: BeVi
doi: 10.1093/molbev/msab178
external_id:
  isi:
  - '000741368600009'
  pmid:
  - '34146097'
file:
- access_level: open_access
  checksum: 1b096702fb356d9c0eb88e1b3fcff5f8
  content_type: application/pdf
  creator: dernst
  date_created: 2022-05-06T09:47:18Z
  date_updated: 2022-05-06T09:47:18Z
  file_id: '11352'
  file_name: 2021_MolecularBiolEvolution_Elkrewi.pdf
  file_size: 1008594
  relation: main_file
  success: 1
file_date_updated: 2022-05-06T09:47:18Z
has_accepted_license: '1'
isi: 1
keyword:
- sex chromosomes
- evolutionary strata
- W-linked gene
- sex determining gene
- schistosome parasites
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 250ED89C-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P28842-B22
  name: Sex chromosome evolution under male- and female- heterogamety
publication: Molecular Biology and Evolution
publication_identifier:
  eissn:
  - 1537-1719
  issn:
  - 0737-4038
publication_status: published
publisher: 'Oxford University Press '
quality_controlled: '1'
scopus_import: '1'
status: public
title: Schistosome W-Linked genes inform temporal dynamics of sex chromosome evolution
  and suggest candidate for sex determination
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
year: '2021'
...
---
_id: '9908'
abstract:
- lang: eng
  text: About eight million animal species are estimated to live on Earth, and all
    except those belonging to one subphylum are invertebrates. Invertebrates are incredibly
    diverse in their morphologies, life histories, and in the range of the ecological
    niches that they occupy. A great variety of modes of reproduction and sex determination
    systems is also observed among them, and their mosaic-distribution across the
    phylogeny shows that transitions between them occur frequently and rapidly. Genetic
    conflict in its various forms is a long-standing theory to explain what drives
    those evolutionary transitions. Here, we review (1) the different modes of reproduction
    among invertebrate species, highlighting sexual reproduction as the probable ancestral
    state; (2) the paradoxical diversity of sex determination systems; (3) the different
    types of genetic conflicts that could drive the evolution of such different systems.
article_number: '1136'
article_processing_charge: Yes
article_type: review
author:
- first_name: Marion A L
  full_name: Picard, Marion A L
  id: 2C921A7A-F248-11E8-B48F-1D18A9856A87
  last_name: Picard
  orcid: 0000-0002-8101-2518
- first_name: Beatriz
  full_name: Vicoso, Beatriz
  id: 49E1C5C6-F248-11E8-B48F-1D18A9856A87
  last_name: Vicoso
  orcid: 0000-0002-4579-8306
- first_name: Stéphanie
  full_name: Bertrand, Stéphanie
  last_name: Bertrand
- first_name: Hector
  full_name: Escriva, Hector
  last_name: Escriva
citation:
  ama: Picard MAL, Vicoso B, Bertrand S, Escriva H. Diversity of modes of reproduction
    and sex determination systems in invertebrates, and the putative contribution
    of genetic conflict. <i>Genes</i>. 2021;12(8). doi:<a href="https://doi.org/10.3390/genes12081136">10.3390/genes12081136</a>
  apa: Picard, M. A. L., Vicoso, B., Bertrand, S., &#38; Escriva, H. (2021). Diversity
    of modes of reproduction and sex determination systems in invertebrates, and the
    putative contribution of genetic conflict. <i>Genes</i>. MDPI. <a href="https://doi.org/10.3390/genes12081136">https://doi.org/10.3390/genes12081136</a>
  chicago: Picard, Marion A L, Beatriz Vicoso, Stéphanie Bertrand, and Hector Escriva.
    “Diversity of Modes of Reproduction and Sex Determination Systems in Invertebrates,
    and the Putative Contribution of Genetic Conflict.” <i>Genes</i>. MDPI, 2021.
    <a href="https://doi.org/10.3390/genes12081136">https://doi.org/10.3390/genes12081136</a>.
  ieee: M. A. L. Picard, B. Vicoso, S. Bertrand, and H. Escriva, “Diversity of modes
    of reproduction and sex determination systems in invertebrates, and the putative
    contribution of genetic conflict,” <i>Genes</i>, vol. 12, no. 8. MDPI, 2021.
  ista: Picard MAL, Vicoso B, Bertrand S, Escriva H. 2021. Diversity of modes of reproduction
    and sex determination systems in invertebrates, and the putative contribution
    of genetic conflict. Genes. 12(8), 1136.
  mla: Picard, Marion A. L., et al. “Diversity of Modes of Reproduction and Sex Determination
    Systems in Invertebrates, and the Putative Contribution of Genetic Conflict.”
    <i>Genes</i>, vol. 12, no. 8, 1136, MDPI, 2021, doi:<a href="https://doi.org/10.3390/genes12081136">10.3390/genes12081136</a>.
  short: M.A.L. Picard, B. Vicoso, S. Bertrand, H. Escriva, Genes 12 (2021).
date_created: 2021-08-15T22:01:27Z
date_published: 2021-08-01T00:00:00Z
date_updated: 2023-08-11T10:42:32Z
day: '01'
ddc:
- '570'
department:
- _id: BeVi
doi: 10.3390/genes12081136
ec_funded: 1
external_id:
  isi:
  - '000690475900001'
file:
- access_level: open_access
  checksum: 744e60e56d290a96da3c91a9779f886f
  content_type: application/pdf
  creator: asandaue
  date_created: 2021-08-16T09:49:35Z
  date_updated: 2021-08-16T09:49:35Z
  file_id: '9926'
  file_name: 2021_Genes_Picard.pdf
  file_size: 2297655
  relation: main_file
  success: 1
file_date_updated: 2021-08-16T09:49:35Z
has_accepted_license: '1'
intvolume: '        12'
isi: 1
issue: '8'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
project:
- _id: 250BDE62-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '715257'
  name: Prevalence and Influence of Sexual Antagonism on Genome Evolution
publication: Genes
publication_identifier:
  eissn:
  - '20734425'
publication_status: published
publisher: MDPI
quality_controlled: '1'
scopus_import: '1'
status: public
title: Diversity of modes of reproduction and sex determination systems in invertebrates,
  and the putative contribution of genetic conflict
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 12
year: '2021'
...
---
_id: '6755'
abstract:
- lang: eng
  text: 'Differentiated sex chromosomes are accompanied by a difference in gene dose
    between X/Z-specific and autosomal genes. At the transcriptomic level, these sex-linked
    genes can lead to expression imbalance, or gene dosage can be compensated by epigenetic
    mechanisms and results into expression level equalization. Schistosoma mansoni
    has been previously described as a ZW species (i.e., female heterogamety, in opposition
    to XY male heterogametic species) with a partial dosage compensation, but underlying
    mechanisms are still unexplored. Here, we combine transcriptomic (RNA-Seq) and
    epigenetic data (ChIP-Seq against H3K4me3, H3K27me3,andH4K20me1histonemarks) in
    free larval cercariae and intravertebrate parasitic stages. For the first time,
    we describe differences in dosage compensation status in ZW females, depending
    on the parasitic status: free cercariae display global dosage compensation, whereas
    intravertebrate stages show a partial dosage compensation. We also highlight regional
    differences of gene expression along the Z chromosome in cercariae, but not in
    the intravertebrate stages. Finally, we feature a consistent permissive chromatin
    landscape of the Z chromosome in both sexes and stages. We argue that dosage compensation
    in schistosomes is characterized by chromatin remodeling mechanisms in the Z-specific
    region.'
acknowledged_ssus:
- _id: CampIT
article_processing_charge: No
article_type: original
author:
- first_name: Marion A L
  full_name: Picard, Marion A L
  id: 2C921A7A-F248-11E8-B48F-1D18A9856A87
  last_name: Picard
  orcid: 0000-0002-8101-2518
- first_name: Beatriz
  full_name: Vicoso, Beatriz
  id: 49E1C5C6-F248-11E8-B48F-1D18A9856A87
  last_name: Vicoso
  orcid: 0000-0002-4579-8306
- first_name: David
  full_name: Roquis, David
  last_name: Roquis
- first_name: Ingo
  full_name: Bulla, Ingo
  last_name: Bulla
- first_name: Ronaldo C.
  full_name: Augusto, Ronaldo C.
  last_name: Augusto
- first_name: Nathalie
  full_name: Arancibia, Nathalie
  last_name: Arancibia
- first_name: Christoph
  full_name: Grunau, Christoph
  last_name: Grunau
- first_name: Jérôme
  full_name: Boissier, Jérôme
  last_name: Boissier
- first_name: Céline
  full_name: Cosseau, Céline
  last_name: Cosseau
citation:
  ama: 'Picard MAL, Vicoso B, Roquis D, et al. Dosage compensation throughout the
    Schistosoma mansoni lifecycle: Specific chromatin landscape of the Z chromosome.
    <i>Genome biology and evolution</i>. 2019;11(7):1909-1922. doi:<a href="https://doi.org/10.1093/gbe/evz133">10.1093/gbe/evz133</a>'
  apa: 'Picard, M. A. L., Vicoso, B., Roquis, D., Bulla, I., Augusto, R. C., Arancibia,
    N., … Cosseau, C. (2019). Dosage compensation throughout the Schistosoma mansoni
    lifecycle: Specific chromatin landscape of the Z chromosome. <i>Genome Biology
    and Evolution</i>. Oxford Academic Press. <a href="https://doi.org/10.1093/gbe/evz133">https://doi.org/10.1093/gbe/evz133</a>'
  chicago: 'Picard, Marion A L, Beatriz Vicoso, David Roquis, Ingo Bulla, Ronaldo
    C. Augusto, Nathalie Arancibia, Christoph Grunau, Jérôme Boissier, and Céline
    Cosseau. “Dosage Compensation throughout the Schistosoma Mansoni Lifecycle: Specific
    Chromatin Landscape of the Z Chromosome.” <i>Genome Biology and Evolution</i>.
    Oxford Academic Press, 2019. <a href="https://doi.org/10.1093/gbe/evz133">https://doi.org/10.1093/gbe/evz133</a>.'
  ieee: 'M. A. L. Picard <i>et al.</i>, “Dosage compensation throughout the Schistosoma
    mansoni lifecycle: Specific chromatin landscape of the Z chromosome,” <i>Genome
    biology and evolution</i>, vol. 11, no. 7. Oxford Academic Press, pp. 1909–1922,
    2019.'
  ista: 'Picard MAL, Vicoso B, Roquis D, Bulla I, Augusto RC, Arancibia N, Grunau
    C, Boissier J, Cosseau C. 2019. Dosage compensation throughout the Schistosoma
    mansoni lifecycle: Specific chromatin landscape of the Z chromosome. Genome biology
    and evolution. 11(7), 1909–1922.'
  mla: 'Picard, Marion A. L., et al. “Dosage Compensation throughout the Schistosoma
    Mansoni Lifecycle: Specific Chromatin Landscape of the Z Chromosome.” <i>Genome
    Biology and Evolution</i>, vol. 11, no. 7, Oxford Academic Press, 2019, pp. 1909–22,
    doi:<a href="https://doi.org/10.1093/gbe/evz133">10.1093/gbe/evz133</a>.'
  short: M.A.L. Picard, B. Vicoso, D. Roquis, I. Bulla, R.C. Augusto, N. Arancibia,
    C. Grunau, J. Boissier, C. Cosseau, Genome Biology and Evolution 11 (2019) 1909–1922.
date_created: 2019-08-04T21:59:18Z
date_published: 2019-07-01T00:00:00Z
date_updated: 2023-08-29T06:53:58Z
day: '01'
ddc:
- '570'
department:
- _id: BeVi
doi: 10.1093/gbe/evz133
external_id:
  isi:
  - '000484039500018'
  pmid:
  - '31273378'
file:
- access_level: open_access
  checksum: f9e8f6863a406dcc5a36b2be001c138c
  content_type: application/pdf
  creator: dernst
  date_created: 2019-08-05T07:55:02Z
  date_updated: 2020-07-14T12:47:39Z
  file_id: '6765'
  file_name: 2019_GenomeBiology_Picard.pdf
  file_size: 580205
  relation: main_file
file_date_updated: 2020-07-14T12:47:39Z
has_accepted_license: '1'
intvolume: '        11'
isi: 1
issue: '7'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
page: 1909-1922
pmid: 1
publication: Genome biology and evolution
publication_identifier:
  eissn:
  - 1759-6653
publication_status: published
publisher: Oxford Academic Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Dosage compensation throughout the Schistosoma mansoni lifecycle: Specific
  chromatin landscape of the Z chromosome'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 11
year: '2019'
...
---
_id: '5989'
abstract:
- lang: eng
  text: Schistosomes are the causative agents of schistosomiasis, a neglected tropical
    disease affecting over 230 million people worldwide.Additionally to their major
    impact on human health, they are also models of choice in evolutionary biology.
    These parasitic flatwormsare unique among the common hermaphroditic trematodes
    as they have separate sexes. This so-called “evolutionary scandal”displays a female
    heterogametic genetic sex-determination system (ZZ males and ZW females), as well
    as a pronounced adult sexualdimorphism. These phenotypic differences are determined
    by a shared set of genes in both sexes, potentially leading to intralocussexual
    conflicts. To resolve these conflicts in sexually selected traits, molecular mechanisms
    such as sex-biased gene expression couldoccur, but parent-of-origin gene expression
    also provides an alternative. In this work we investigated the latter mechanism,
    that is,genes expressed preferentially from either the maternal or the paternal
    allele, inSchistosoma mansonispecies. To this end, tran-scriptomes from male and
    female hybrid adults obtained by strain crosses were sequenced. Strain-specific
    single nucleotide poly-morphism (SNP) markers allowed us to discriminate the parental
    origin, while reciprocal crosses helped to differentiate parentalexpression from
    strain-specific expression. We identified genes containing SNPs expressed in a
    parent-of-origin manner consistentwith paternal and maternal imprints. Although
    the majority of the SNPs was identified in mitochondrial and Z-specific loci,
    theremaining SNPs found in male and female transcriptomes were situated in genes
    that have the potential to explain sexual differencesin schistosome parasites.
    Furthermore, we identified and validated four new Z-specific scaffolds.
article_processing_charge: No
author:
- first_name: Julien
  full_name: Kincaid-Smith, Julien
  last_name: Kincaid-Smith
- first_name: Marion A L
  full_name: Picard, Marion A L
  id: 2C921A7A-F248-11E8-B48F-1D18A9856A87
  last_name: Picard
  orcid: 0000-0002-8101-2518
- first_name: Céline
  full_name: Cosseau, Céline
  last_name: Cosseau
- first_name: Jérôme
  full_name: Boissier, Jérôme
  last_name: Boissier
- first_name: Dany
  full_name: Severac, Dany
  last_name: Severac
- first_name: Christoph
  full_name: Grunau, Christoph
  last_name: Grunau
- first_name: Eve
  full_name: Toulza, Eve
  last_name: Toulza
citation:
  ama: Kincaid-Smith J, Picard MAL, Cosseau C, et al. Parent-of-Origin-Dependent Gene
    Expression in Male and Female Schistosome Parasites. <i>Genome Biology and Evolution</i>.
    2018;10(3):840-856. doi:<a href="https://doi.org/10.1093/gbe/evy037">10.1093/gbe/evy037</a>
  apa: Kincaid-Smith, J., Picard, M. A. L., Cosseau, C., Boissier, J., Severac, D.,
    Grunau, C., &#38; Toulza, E. (2018). Parent-of-Origin-Dependent Gene Expression
    in Male and Female Schistosome Parasites. <i>Genome Biology and Evolution</i>.
    Oxford University Press. <a href="https://doi.org/10.1093/gbe/evy037">https://doi.org/10.1093/gbe/evy037</a>
  chicago: Kincaid-Smith, Julien, Marion A L Picard, Céline Cosseau, Jérôme Boissier,
    Dany Severac, Christoph Grunau, and Eve Toulza. “Parent-of-Origin-Dependent Gene
    Expression in Male and Female Schistosome Parasites.” <i>Genome Biology and Evolution</i>.
    Oxford University Press, 2018. <a href="https://doi.org/10.1093/gbe/evy037">https://doi.org/10.1093/gbe/evy037</a>.
  ieee: J. Kincaid-Smith <i>et al.</i>, “Parent-of-Origin-Dependent Gene Expression
    in Male and Female Schistosome Parasites,” <i>Genome Biology and Evolution</i>,
    vol. 10, no. 3. Oxford University Press, pp. 840–856, 2018.
  ista: Kincaid-Smith J, Picard MAL, Cosseau C, Boissier J, Severac D, Grunau C, Toulza
    E. 2018. Parent-of-Origin-Dependent Gene Expression in Male and Female Schistosome
    Parasites. Genome Biology and Evolution. 10(3), 840–856.
  mla: Kincaid-Smith, Julien, et al. “Parent-of-Origin-Dependent Gene Expression in
    Male and Female Schistosome Parasites.” <i>Genome Biology and Evolution</i>, vol.
    10, no. 3, Oxford University Press, 2018, pp. 840–56, doi:<a href="https://doi.org/10.1093/gbe/evy037">10.1093/gbe/evy037</a>.
  short: J. Kincaid-Smith, M.A.L. Picard, C. Cosseau, J. Boissier, D. Severac, C.
    Grunau, E. Toulza, Genome Biology and Evolution 10 (2018) 840–856.
date_created: 2019-02-14T12:13:52Z
date_published: 2018-03-01T00:00:00Z
date_updated: 2023-09-19T14:39:08Z
day: '01'
ddc:
- '570'
department:
- _id: BeVi
doi: 10.1093/gbe/evy037
external_id:
  isi:
  - '000429483700013'
file:
- access_level: open_access
  checksum: 736a459cb77de5824354466bb0331caf
  content_type: application/pdf
  creator: dernst
  date_created: 2019-02-14T12:20:01Z
  date_updated: 2020-07-14T12:47:15Z
  file_id: '5991'
  file_name: 2018_GBE_Kincaid_Smith.pdf
  file_size: 529755
  relation: main_file
file_date_updated: 2020-07-14T12:47:15Z
has_accepted_license: '1'
intvolume: '        10'
isi: 1
issue: '3'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc/4.0/
month: '03'
oa: 1
oa_version: Published Version
page: 840-856
publication: Genome Biology and Evolution
publication_identifier:
  issn:
  - 1759-6653
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Parent-of-Origin-Dependent Gene Expression in Male and Female Schistosome Parasites
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
  short: CC BY-NC (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 10
year: '2018'
...
---
_id: '131'
abstract:
- lang: eng
  text: 'XY systems usually show chromosome-wide compensation of X-linked genes, while
    in many ZW systems, compensation is restricted to a minority of dosage-sensitive
    genes. Why such differences arose is still unclear. Here, we combine comparative
    genomics, transcriptomics and proteomics to obtain a complete overview of the
    evolution of gene dosage on the Z-chromosome of Schistosoma parasites. We compare
    the Z-chromosome gene content of African (Schistosoma mansoni and S. haematobium)
    and Asian (S. japonicum) schistosomes and describe lineage-specific evolutionary
    strata. We use these to assess gene expression evolution following sex-linkage.
    The resulting patterns suggest a reduction in expression of Z-linked genes in
    females, combined with upregulation of the Z in both sexes, in line with the first
    step of Ohno’s classic model of dosage compensation evolution. Quantitative proteomics
    suggest that post-transcriptional mechanisms do not play a major role in balancing
    the expression of Z-linked genes. '
acknowledgement: We are grateful to Lu Dabing (Soochow University, Suzhou, China)
  for providing Schistosoma japonicum samples, to Ariana Macon (IST Austria) and Georgette
  Stovall (JLU Giessen) for technical assistance, to IT support at IST Austria for
  providing optimal environment to bioinformatic analyses, and to the Vicoso lab for
  comments on the manuscript.
article_number: e35684
article_processing_charge: No
article_type: original
author:
- first_name: Marion A
  full_name: Picard, Marion A
  id: 2C921A7A-F248-11E8-B48F-1D18A9856A87
  last_name: Picard
  orcid: 0000-0002-8101-2518
- first_name: Celine
  full_name: Cosseau, Celine
  last_name: Cosseau
- first_name: Sabrina
  full_name: Ferré, Sabrina
  last_name: Ferré
- first_name: Thomas
  full_name: Quack, Thomas
  last_name: Quack
- first_name: Christoph
  full_name: Grevelding, Christoph
  last_name: Grevelding
- first_name: Yohann
  full_name: Couté, Yohann
  last_name: Couté
- first_name: Beatriz
  full_name: Vicoso, Beatriz
  id: 49E1C5C6-F248-11E8-B48F-1D18A9856A87
  last_name: Vicoso
  orcid: 0000-0002-4579-8306
citation:
  ama: Picard MAL, Cosseau C, Ferré S, et al. Evolution of gene dosage on the Z-chromosome
    of schistosome parasites. <i>eLife</i>. 2018;7. doi:<a href="https://doi.org/10.7554/eLife.35684">10.7554/eLife.35684</a>
  apa: Picard, M. A. L., Cosseau, C., Ferré, S., Quack, T., Grevelding, C., Couté,
    Y., &#38; Vicoso, B. (2018). Evolution of gene dosage on the Z-chromosome of schistosome
    parasites. <i>ELife</i>. eLife Sciences Publications. <a href="https://doi.org/10.7554/eLife.35684">https://doi.org/10.7554/eLife.35684</a>
  chicago: Picard, Marion A L, Celine Cosseau, Sabrina Ferré, Thomas Quack, Christoph
    Grevelding, Yohann Couté, and Beatriz Vicoso. “Evolution of Gene Dosage on the
    Z-Chromosome of Schistosome Parasites.” <i>ELife</i>. eLife Sciences Publications,
    2018. <a href="https://doi.org/10.7554/eLife.35684">https://doi.org/10.7554/eLife.35684</a>.
  ieee: M. A. L. Picard <i>et al.</i>, “Evolution of gene dosage on the Z-chromosome
    of schistosome parasites,” <i>eLife</i>, vol. 7. eLife Sciences Publications,
    2018.
  ista: Picard MAL, Cosseau C, Ferré S, Quack T, Grevelding C, Couté Y, Vicoso B.
    2018. Evolution of gene dosage on the Z-chromosome of schistosome parasites. eLife.
    7, e35684.
  mla: Picard, Marion A. L., et al. “Evolution of Gene Dosage on the Z-Chromosome
    of Schistosome Parasites.” <i>ELife</i>, vol. 7, e35684, eLife Sciences Publications,
    2018, doi:<a href="https://doi.org/10.7554/eLife.35684">10.7554/eLife.35684</a>.
  short: M.A.L. Picard, C. Cosseau, S. Ferré, T. Quack, C. Grevelding, Y. Couté, B.
    Vicoso, ELife 7 (2018).
date_created: 2018-12-11T11:44:47Z
date_published: 2018-08-13T00:00:00Z
date_updated: 2024-02-21T13:45:12Z
day: '13'
ddc:
- '570'
department:
- _id: BeVi
doi: 10.7554/eLife.35684
external_id:
  isi:
  - '000441388200001'
file:
- access_level: open_access
  checksum: d6331d4385b1fffd6b47b45d5949d841
  content_type: application/pdf
  creator: dernst
  date_created: 2018-12-17T11:55:05Z
  date_updated: 2020-07-14T12:44:43Z
  file_id: '5695'
  file_name: 2018_eLife_Picard.pdf
  file_size: 3158125
  relation: main_file
file_date_updated: 2020-07-14T12:44:43Z
has_accepted_license: '1'
intvolume: '         7'
isi: 1
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
project:
- _id: 250ED89C-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P28842-B22
  name: Sex chromosome evolution under male- and female- heterogamety
publication: eLife
publication_status: published
publisher: eLife Sciences Publications
publist_id: '7792'
quality_controlled: '1'
related_material:
  record:
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    relation: popular_science
    status: public
scopus_import: '1'
status: public
title: Evolution of gene dosage on the Z-chromosome of schistosome parasites
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 7
year: '2018'
...
---
_id: '614'
abstract:
- lang: eng
  text: 'Moths and butterflies (Lepidoptera) usually have a pair of differentiated
    WZ sex chromosomes. However, in most lineages outside of the division Ditrysia,
    as well as in the sister order Trichoptera, females lack a W chromosome. The W
    is therefore thought to have been acquired secondarily. Here we compare the genomes
    of three Lepidoptera species (one Dytrisia and two non-Dytrisia) to test three
    models accounting for the origin of the W: (1) a Z-autosome fusion; (2) a sex
    chromosome turnover; and (3) a non-canonical mechanism (e.g., through the recruitment
    of a B chromosome). We show that the gene content of the Z is highly conserved
    across Lepidoptera (rejecting a sex chromosome turnover) and that very few genes
    moved onto the Z in the common ancestor of the Ditrysia (arguing against a Z-autosome
    fusion). Our comparative genomics analysis therefore supports the secondary acquisition
    of the Lepidoptera W by a non-canonical mechanism, and it confirms the extreme
    stability of well-differentiated sex chromosomes.'
article_number: '1486'
article_processing_charge: No
article_type: original
author:
- first_name: Christelle
  full_name: Fraisse, Christelle
  id: 32DF5794-F248-11E8-B48F-1D18A9856A87
  last_name: Fraisse
  orcid: 0000-0001-8441-5075
- first_name: Marion A
  full_name: Picard, Marion A
  id: 2C921A7A-F248-11E8-B48F-1D18A9856A87
  last_name: Picard
  orcid: 0000-0002-8101-2518
- first_name: Beatriz
  full_name: Vicoso, Beatriz
  id: 49E1C5C6-F248-11E8-B48F-1D18A9856A87
  last_name: Vicoso
  orcid: 0000-0002-4579-8306
citation:
  ama: Fraisse C, Picard MAL, Vicoso B. The deep conservation of the Lepidoptera Z
    chromosome suggests a non canonical origin of the W. <i>Nature Communications</i>.
    2017;8(1). doi:<a href="https://doi.org/10.1038/s41467-017-01663-5">10.1038/s41467-017-01663-5</a>
  apa: Fraisse, C., Picard, M. A. L., &#38; Vicoso, B. (2017). The deep conservation
    of the Lepidoptera Z chromosome suggests a non canonical origin of the W. <i>Nature
    Communications</i>. Nature Publishing Group. <a href="https://doi.org/10.1038/s41467-017-01663-5">https://doi.org/10.1038/s41467-017-01663-5</a>
  chicago: Fraisse, Christelle, Marion A L Picard, and Beatriz Vicoso. “The Deep Conservation
    of the Lepidoptera Z Chromosome Suggests a Non Canonical Origin of the W.” <i>Nature
    Communications</i>. Nature Publishing Group, 2017. <a href="https://doi.org/10.1038/s41467-017-01663-5">https://doi.org/10.1038/s41467-017-01663-5</a>.
  ieee: C. Fraisse, M. A. L. Picard, and B. Vicoso, “The deep conservation of the
    Lepidoptera Z chromosome suggests a non canonical origin of the W,” <i>Nature
    Communications</i>, vol. 8, no. 1. Nature Publishing Group, 2017.
  ista: Fraisse C, Picard MAL, Vicoso B. 2017. The deep conservation of the Lepidoptera
    Z chromosome suggests a non canonical origin of the W. Nature Communications.
    8(1), 1486.
  mla: Fraisse, Christelle, et al. “The Deep Conservation of the Lepidoptera Z Chromosome
    Suggests a Non Canonical Origin of the W.” <i>Nature Communications</i>, vol.
    8, no. 1, 1486, Nature Publishing Group, 2017, doi:<a href="https://doi.org/10.1038/s41467-017-01663-5">10.1038/s41467-017-01663-5</a>.
  short: C. Fraisse, M.A.L. Picard, B. Vicoso, Nature Communications 8 (2017).
date_created: 2018-12-11T11:47:30Z
date_published: 2017-12-01T00:00:00Z
date_updated: 2024-02-21T13:47:47Z
day: '01'
ddc:
- '570'
- '576'
department:
- _id: BeVi
- _id: NiBa
doi: 10.1038/s41467-017-01663-5
external_id:
  pmid:
  - '29133797'
file:
- access_level: open_access
  checksum: 4da2651303c8afc2f7fc419be42a2433
  content_type: application/pdf
  creator: dernst
  date_created: 2020-03-03T15:55:50Z
  date_updated: 2020-07-14T12:47:20Z
  file_id: '7562'
  file_name: 2017_NatureComm_Fraisse.pdf
  file_size: 1201520
  relation: main_file
file_date_updated: 2020-07-14T12:47:20Z
has_accepted_license: '1'
intvolume: '         8'
issue: '1'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 250ED89C-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P28842-B22
  name: Sex chromosome evolution under male- and female- heterogamety
publication: Nature Communications
publication_identifier:
  issn:
  - '20411723'
publication_status: published
publisher: Nature Publishing Group
publist_id: '7190'
pubrep_id: '910'
quality_controlled: '1'
related_material:
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    relation: popular_science
    status: public
scopus_import: 1
status: public
title: The deep conservation of the Lepidoptera Z chromosome suggests a non canonical
  origin of the W
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8
year: '2017'
...
