---
_id: '3077'
author:
- first_name: Jirí
full_name: Friml, Jirí
id: 4159519E-F248-11E8-B48F-1D18A9856A87
last_name: Friml
orcid: 0000-0002-8302-7596
- first_name: Angharad
full_name: Jones, Angharad
last_name: Jones
citation:
ama: 'Friml J, Jones A. Endoplasmic reticulum: The rising compartment in auxin biology.
Plant Physiology. 2010;154(2):458-462. doi:10.1104/pp.110.161380'
apa: 'Friml, J., & Jones, A. (2010). Endoplasmic reticulum: The rising compartment
in auxin biology. Plant Physiology. American Society of Plant Biologists.
https://doi.org/10.1104/pp.110.161380'
chicago: 'Friml, Jiří, and Angharad Jones. “Endoplasmic Reticulum: The Rising Compartment
in Auxin Biology.” Plant Physiology. American Society of Plant Biologists,
2010. https://doi.org/10.1104/pp.110.161380.'
ieee: 'J. Friml and A. Jones, “Endoplasmic reticulum: The rising compartment in
auxin biology,” Plant Physiology, vol. 154, no. 2. American Society of
Plant Biologists, pp. 458–462, 2010.'
ista: 'Friml J, Jones A. 2010. Endoplasmic reticulum: The rising compartment in
auxin biology. Plant Physiology. 154(2), 458–462.'
mla: 'Friml, Jiří, and Angharad Jones. “Endoplasmic Reticulum: The Rising Compartment
in Auxin Biology.” Plant Physiology, vol. 154, no. 2, American Society
of Plant Biologists, 2010, pp. 458–62, doi:10.1104/pp.110.161380.'
short: J. Friml, A. Jones, Plant Physiology 154 (2010) 458–462.
date_created: 2018-12-11T12:01:14Z
date_published: 2010-10-01T00:00:00Z
date_updated: 2021-01-12T07:40:53Z
day: '01'
doi: 10.1104/pp.110.161380
extern: '1'
external_id:
pmid:
- '20921163'
intvolume: ' 154'
issue: '2'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://www.ncbi.nlm.nih.gov/pubmed/20921163
month: '10'
oa: 1
oa_version: Published Version
page: 458 - 462
pmid: 1
publication: Plant Physiology
publication_status: published
publisher: American Society of Plant Biologists
publist_id: '3624'
status: public
title: 'Endoplasmic reticulum: The rising compartment in auxin biology'
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 154
year: '2010'
...
---
_id: '3303'
abstract:
- lang: eng
text: 'Biological traits result in part from interactions between different genetic
loci. This can lead to sign epistasis, in which a beneficial adaptation involves
a combination of individually deleterious or neutral mutations; in this case,
a population must cross a “fitness valley” to adapt. Recombination can assist
this process by combining mutations from different individuals or retard it by
breaking up the adaptive combination. Here, we analyze the simplest fitness valley,
in which an adaptation requires one mutation at each of two loci to provide a
fitness benefit. We present a theoretical analysis of the effect of recombination
on the valley-crossing process across the full spectrum of possible parameter
regimes. We find that low recombination rates can speed up valley crossing relative
to the asexual case, while higher recombination rates slow down valley crossing,
with the transition between the two regimes occurring when the recombination rate
between the loci is approximately equal to the selective advantage provided by
the adaptation. In large populations, if the recombination rate is high and selection
against single mutants is substantial, the time to cross the valley grows exponentially
with population size, effectively meaning that the population cannot acquire the
adaptation. Recombination at the optimal (low) rate can reduce the valley-crossing
time by up to several orders of magnitude relative to that in an asexual population. '
acknowledgement: "This work was supported in part by a Robert N. Noyce Stanford Graduate
Fellowship and European Research Council grant 250152 (to D.B.W.) and by National
Institutes of Health grant GM 28016 (to M.W.F.).\r\nWe thank Michael Desai for many
ideas and discussions and are grateful to Joanna Masel and an anonymous reviewer
for their helpful suggestions. "
author:
- first_name: Daniel
full_name: Weissman, Daniel
id: 2D0CE020-F248-11E8-B48F-1D18A9856A87
last_name: Weissman
- first_name: Marcus
full_name: Feldman, Marcus
last_name: Feldman
- first_name: Daniel
full_name: Fisher, Daniel
last_name: Fisher
citation:
ama: Weissman D, Feldman M, Fisher D. The rate of fitness-valley crossing in sexual
populations. Genetics. 2010;186(4):1389-1410. doi:10.1534/genetics.110.123240
apa: Weissman, D., Feldman, M., & Fisher, D. (2010). The rate of fitness-valley
crossing in sexual populations. Genetics. Genetics Society of America.
https://doi.org/10.1534/genetics.110.123240
chicago: Weissman, Daniel, Marcus Feldman, and Daniel Fisher. “The Rate of Fitness-Valley
Crossing in Sexual Populations.” Genetics. Genetics Society of America,
2010. https://doi.org/10.1534/genetics.110.123240.
ieee: D. Weissman, M. Feldman, and D. Fisher, “The rate of fitness-valley crossing
in sexual populations,” Genetics, vol. 186, no. 4. Genetics Society of
America, pp. 1389–1410, 2010.
ista: Weissman D, Feldman M, Fisher D. 2010. The rate of fitness-valley crossing
in sexual populations. Genetics. 186(4), 1389–1410.
mla: Weissman, Daniel, et al. “The Rate of Fitness-Valley Crossing in Sexual Populations.”
Genetics, vol. 186, no. 4, Genetics Society of America, 2010, pp. 1389–410,
doi:10.1534/genetics.110.123240.
short: D. Weissman, M. Feldman, D. Fisher, Genetics 186 (2010) 1389–1410.
date_created: 2018-12-11T12:02:33Z
date_published: 2010-12-01T00:00:00Z
date_updated: 2021-01-12T07:42:31Z
day: '01'
department:
- _id: NiBa
doi: 10.1534/genetics.110.123240
ec_funded: 1
intvolume: ' 186'
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2998319/
month: '12'
oa: 1
oa_version: Submitted Version
page: 1389 - 1410
project:
- _id: 25B07788-B435-11E9-9278-68D0E5697425
call_identifier: FP7
grant_number: '250152'
name: Limits to selection in biology and in evolutionary computation
publication: Genetics
publication_status: published
publisher: Genetics Society of America
publist_id: '3337'
quality_controlled: '1'
scopus_import: 1
status: public
title: The rate of fitness-valley crossing in sexual populations
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 186
year: '2010'
...
---
_id: '3306'
abstract:
- lang: eng
text: We use methods from combinatorics and algebraic statistics to study analogues
of birth-and-death processes that have as their state space a finite subset of
the m-dimensional lattice and for which the m matrices that record the transition
probabilities in each of the lattice directions commute pairwise. One reason such
processes are of interest is that the transition matrix is straightforward to
diagonalize, and hence it is easy to compute n step transition probabilities.
The set of commuting birth-and-death processes decomposes as a union of toric
varieties, with the main component being the closure of all processes whose nearest
neighbor transition probabilities are positive. We exhibit an explicit monomial
parametrization for this main component, and we explore the boundary components
using primary decomposition.
acknowledgement: Steven N. Evans was supported in part by NSF Grants DMS-04-05778
and DMS-09-07630. Bernd Sturmfels was supported in part by NSF Grants DMS-04-56960
and DMS-07-57236. Caroline Uhler was supported by an International Fulbright Science
and Technology Fellowship.
author:
- first_name: Steven
full_name: Evans, Steven N
last_name: Evans
- first_name: Bernd
full_name: Sturmfels, Bernd
last_name: Sturmfels
- first_name: Caroline
full_name: Caroline Uhler
id: 49ADD78E-F248-11E8-B48F-1D18A9856A87
last_name: Uhler
orcid: 0000-0002-7008-0216
citation:
ama: Evans S, Sturmfels B, Uhler C. Commuting birth and death processes. The
Annals of Applied Probability. 2010;20:238-266. doi:10.1214/09-AAP615
apa: Evans, S., Sturmfels, B., & Uhler, C. (2010). Commuting birth and death
processes. The Annals of Applied Probability. Institute of Mathematical
Statistics. https://doi.org/10.1214/09-AAP615
chicago: Evans, Steven, Bernd Sturmfels, and Caroline Uhler. “Commuting Birth and
Death Processes.” The Annals of Applied Probability. Institute of Mathematical
Statistics, 2010. https://doi.org/10.1214/09-AAP615.
ieee: S. Evans, B. Sturmfels, and C. Uhler, “Commuting birth and death processes,”
The Annals of Applied Probability, vol. 20. Institute of Mathematical Statistics,
pp. 238–266, 2010.
ista: Evans S, Sturmfels B, Uhler C. 2010. Commuting birth and death processes.
The Annals of Applied Probability. 20, 238–266.
mla: Evans, Steven, et al. “Commuting Birth and Death Processes.” The Annals
of Applied Probability, vol. 20, Institute of Mathematical Statistics, 2010,
pp. 238–66, doi:10.1214/09-AAP615.
short: S. Evans, B. Sturmfels, C. Uhler, The Annals of Applied Probability 20 (2010)
238–266.
date_created: 2018-12-11T12:02:35Z
date_published: 2010-01-01T00:00:00Z
date_updated: 2021-01-12T07:42:32Z
day: '01'
doi: 10.1214/09-AAP615
extern: 1
intvolume: ' 20'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/0812.2724
month: '01'
oa: 1
page: 238 - 266
publication: The Annals of Applied Probability
publication_status: published
publisher: Institute of Mathematical Statistics
publist_id: '3334'
quality_controlled: 0
status: public
title: Commuting birth and death processes
type: journal_article
volume: 20
year: '2010'
...
---
_id: '3308'
abstract:
- lang: eng
text: We study multivariate normal models that are described by linear constraints
on the inverse of the covariance matrix. Maximum likelihood estimation for such
models leads to the problem of maximizing the determinant function over a spectrahedron,
and to the problem of characterizing the image of the positive definite cone under
an arbitrary linear projection. These problems at the interface of statistics
and optimization are here examined from the perspective of convex algebraic geometry.
acknowledgement: B. Sturmfels is supported in part by NSF grants DMS-0456960 and DMS-0757236.
C. Uhler is supported by an International Fulbright Science and Technology Fellowship.
author:
- first_name: Bernd
full_name: Sturmfels, Bernd
last_name: Sturmfels
- first_name: Caroline
full_name: Caroline Uhler
id: 49ADD78E-F248-11E8-B48F-1D18A9856A87
last_name: Uhler
orcid: 0000-0002-7008-0216
citation:
ama: Sturmfels B, Uhler C. Multivariate Gaussians, semidefinite matrix completion,
and convex algebraic geometry. Annals of the Institute of Statistical Mathematics.
2010;62(4):603-638. doi:10.1007/s10463-010-0295-4
apa: Sturmfels, B., & Uhler, C. (2010). Multivariate Gaussians, semidefinite
matrix completion, and convex algebraic geometry. Annals of the Institute of
Statistical Mathematics. Springer. https://doi.org/10.1007/s10463-010-0295-4
chicago: Sturmfels, Bernd, and Caroline Uhler. “Multivariate Gaussians, Semidefinite
Matrix Completion, and Convex Algebraic Geometry.” Annals of the Institute
of Statistical Mathematics. Springer, 2010. https://doi.org/10.1007/s10463-010-0295-4.
ieee: B. Sturmfels and C. Uhler, “Multivariate Gaussians, semidefinite matrix completion,
and convex algebraic geometry,” Annals of the Institute of Statistical Mathematics,
vol. 62, no. 4. Springer, pp. 603–638, 2010.
ista: Sturmfels B, Uhler C. 2010. Multivariate Gaussians, semidefinite matrix completion,
and convex algebraic geometry. Annals of the Institute of Statistical Mathematics.
62(4), 603–638.
mla: Sturmfels, Bernd, and Caroline Uhler. “Multivariate Gaussians, Semidefinite
Matrix Completion, and Convex Algebraic Geometry.” Annals of the Institute
of Statistical Mathematics, vol. 62, no. 4, Springer, 2010, pp. 603–38, doi:10.1007/s10463-010-0295-4.
short: B. Sturmfels, C. Uhler, Annals of the Institute of Statistical Mathematics
62 (2010) 603–638.
date_created: 2018-12-11T12:02:35Z
date_published: 2010-08-01T00:00:00Z
date_updated: 2021-01-12T07:42:33Z
day: '01'
doi: 10.1007/s10463-010-0295-4
extern: 1
intvolume: ' 62'
issue: '4'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/0906.3529
month: '08'
oa: 1
page: 603 - 638
publication: Annals of the Institute of Statistical Mathematics
publication_status: published
publisher: Springer
publist_id: '3332'
quality_controlled: 0
status: public
title: Multivariate Gaussians, semidefinite matrix completion, and convex algebraic
geometry
type: journal_article
volume: 62
year: '2010'
...
---
_id: '10908'
abstract:
- lang: eng
text: We present ABC, a software tool for automatically computing symbolic upper
bounds on the number of iterations of nested program loops. The system combines
static analysis of programs with symbolic summation techniques to derive loop
invariant relations between program variables. Iteration bounds are obtained from
the inferred invariants, by replacing variables with bounds on their greatest
values. We have successfully applied ABC to a large number of examples. The derived
symbolic bounds express non-trivial polynomial relations over loop variables.
We also report on results to automatically infer symbolic expressions over harmonic
numbers as upper bounds on loop iteration counts.
acknowledgement: This work was supported in part by the Swiss NSF. The fourth author
is supported by an FWF Hertha Firnberg Research grant (T425-N23).
article_processing_charge: No
author:
- first_name: Régis
full_name: Blanc, Régis
last_name: Blanc
- first_name: Thomas A
full_name: Henzinger, Thomas A
id: 40876CD8-F248-11E8-B48F-1D18A9856A87
last_name: Henzinger
orcid: 0000-0002-2985-7724
- first_name: Thibaud
full_name: Hottelier, Thibaud
last_name: Hottelier
- first_name: Laura
full_name: Kovács, Laura
last_name: Kovács
citation:
ama: 'Blanc R, Henzinger TA, Hottelier T, Kovács L. ABC: Algebraic Bound Computation
for loops. In: Clarke EM, Voronkov A, eds. Logic for Programming, Artificial
Intelligence, and Reasoning. Vol 6355. LNCS. Berlin, Heidelberg: Springer
Nature; 2010:103-118. doi:10.1007/978-3-642-17511-4_7'
apa: 'Blanc, R., Henzinger, T. A., Hottelier, T., & Kovács, L. (2010). ABC:
Algebraic Bound Computation for loops. In E. M. Clarke & A. Voronkov (Eds.),
Logic for Programming, Artificial Intelligence, and Reasoning (Vol. 6355,
pp. 103–118). Berlin, Heidelberg: Springer Nature. https://doi.org/10.1007/978-3-642-17511-4_7'
chicago: 'Blanc, Régis, Thomas A Henzinger, Thibaud Hottelier, and Laura Kovács.
“ABC: Algebraic Bound Computation for Loops.” In Logic for Programming, Artificial
Intelligence, and Reasoning, edited by Edmund M Clarke and Andrei Voronkov,
6355:103–18. LNCS. Berlin, Heidelberg: Springer Nature, 2010. https://doi.org/10.1007/978-3-642-17511-4_7.'
ieee: 'R. Blanc, T. A. Henzinger, T. Hottelier, and L. Kovács, “ABC: Algebraic Bound
Computation for loops,” in Logic for Programming, Artificial Intelligence,
and Reasoning, Dakar, Senegal, 2010, vol. 6355, pp. 103–118.'
ista: 'Blanc R, Henzinger TA, Hottelier T, Kovács L. 2010. ABC: Algebraic Bound
Computation for loops. Logic for Programming, Artificial Intelligence, and Reasoning.
LPAR: Conference on Logic for Programming, Artificial Intelligence and ReasoningLNCS
vol. 6355, 103–118.'
mla: 'Blanc, Régis, et al. “ABC: Algebraic Bound Computation for Loops.” Logic
for Programming, Artificial Intelligence, and Reasoning, edited by Edmund
M Clarke and Andrei Voronkov, vol. 6355, Springer Nature, 2010, pp. 103–18, doi:10.1007/978-3-642-17511-4_7.'
short: R. Blanc, T.A. Henzinger, T. Hottelier, L. Kovács, in:, E.M. Clarke, A. Voronkov
(Eds.), Logic for Programming, Artificial Intelligence, and Reasoning, Springer
Nature, Berlin, Heidelberg, 2010, pp. 103–118.
conference:
end_date: 2010-05-01
location: Dakar, Senegal
name: 'LPAR: Conference on Logic for Programming, Artificial Intelligence and Reasoning'
start_date: 2010-04-25
date_created: 2022-03-21T08:14:35Z
date_published: 2010-05-01T00:00:00Z
date_updated: 2022-06-13T07:44:21Z
day: '01'
department:
- _id: ToHe
doi: 10.1007/978-3-642-17511-4_7
editor:
- first_name: Edmund M
full_name: Clarke, Edmund M
last_name: Clarke
- first_name: Andrei
full_name: Voronkov, Andrei
last_name: Voronkov
intvolume: ' 6355'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://infoscience.epfl.ch/record/186096
month: '05'
oa: 1
oa_version: Submitted Version
page: 103-118
place: Berlin, Heidelberg
publication: Logic for Programming, Artificial Intelligence, and Reasoning
publication_identifier:
eisbn:
- '9783642175114'
eissn:
- 1611-3349
isbn:
- '9783642175107'
issn:
- 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
series_title: LNCS
status: public
title: 'ABC: Algebraic Bound Computation for loops'
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 6355
year: '2010'
...
---
_id: '11098'
article_processing_charge: No
article_type: original
author:
- first_name: Martin W
full_name: HETZER, Martin W
id: 86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed
last_name: HETZER
orcid: 0000-0002-2111-992X
citation:
ama: Hetzer M. The role of the nuclear pore complex in aging of post-mitotic cells.
Aging. 2010;2(2):74-75. doi:10.18632/aging.100125
apa: Hetzer, M. (2010). The role of the nuclear pore complex in aging of post-mitotic
cells. Aging. Impact Journals. https://doi.org/10.18632/aging.100125
chicago: Hetzer, Martin. “The Role of the Nuclear Pore Complex in Aging of Post-Mitotic
Cells.” Aging. Impact Journals, 2010. https://doi.org/10.18632/aging.100125.
ieee: M. Hetzer, “The role of the nuclear pore complex in aging of post-mitotic
cells,” Aging, vol. 2, no. 2. Impact Journals, pp. 74–75, 2010.
ista: Hetzer M. 2010. The role of the nuclear pore complex in aging of post-mitotic
cells. Aging. 2(2), 74–75.
mla: Hetzer, Martin. “The Role of the Nuclear Pore Complex in Aging of Post-Mitotic
Cells.” Aging, vol. 2, no. 2, Impact Journals, 2010, pp. 74–75, doi:10.18632/aging.100125.
short: M. Hetzer, Aging 2 (2010) 74–75.
date_created: 2022-04-07T07:52:58Z
date_published: 2010-02-01T00:00:00Z
date_updated: 2022-07-18T08:54:15Z
day: '01'
doi: 10.18632/aging.100125
extern: '1'
external_id:
pmid:
- '20354266'
intvolume: ' 2'
issue: '2'
keyword:
- Cell Biology
- Aging
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.18632/aging.100125
month: '02'
oa: 1
oa_version: Published Version
page: 74-75
pmid: 1
publication: Aging
publication_identifier:
issn:
- 1945-4589
publication_status: published
publisher: Impact Journals
quality_controlled: '1'
scopus_import: '1'
status: public
title: The role of the nuclear pore complex in aging of post-mitotic cells
type: journal_article
user_id: 72615eeb-f1f3-11ec-aa25-d4573ddc34fd
volume: 2
year: '2010'
...
---
_id: '11101'
abstract:
- lang: eng
text: In metazoa, nuclear pore complexes (NPCs) assemble from disassembled precursors
into a reforming nuclear envelope (NE) at the end of mitosis and into growing
intact NEs during interphase. Here, we show via RNAi-mediated knockdown that ELYS,
a nucleoporin critical for the recruitment of the essential Nup107/160 complex
to chromatin, is required for NPC assembly at the end of mitosis but not during
interphase. Conversely, the transmembrane nucleoporin POM121 is critical for the
incorporation of the Nup107/160 complex into new assembly sites specifically during
interphase. Strikingly, recruitment of the Nup107/160 complex to an intact NE
involves a membrane curvature-sensing domain of its constituent Nup133, which
is not required for postmitotic NPC formation. Our results suggest that in organisms
with open mitosis, NPCs assemble via two distinct mechanisms to accommodate cell
cycle-dependent differences in NE topology.
article_processing_charge: No
article_type: original
author:
- first_name: Christine M.
full_name: Doucet, Christine M.
last_name: Doucet
- first_name: Jessica A.
full_name: Talamas, Jessica A.
last_name: Talamas
- first_name: Martin W
full_name: HETZER, Martin W
id: 86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed
last_name: HETZER
orcid: 0000-0002-2111-992X
citation:
ama: Doucet CM, Talamas JA, Hetzer M. Cell cycle-dependent differences in nuclear
pore complex assembly in metazoa. Cell. 2010;141(6):1030-1041. doi:10.1016/j.cell.2010.04.036
apa: Doucet, C. M., Talamas, J. A., & Hetzer, M. (2010). Cell cycle-dependent
differences in nuclear pore complex assembly in metazoa. Cell. Elsevier.
https://doi.org/10.1016/j.cell.2010.04.036
chicago: Doucet, Christine M., Jessica A. Talamas, and Martin Hetzer. “Cell Cycle-Dependent
Differences in Nuclear Pore Complex Assembly in Metazoa.” Cell. Elsevier,
2010. https://doi.org/10.1016/j.cell.2010.04.036.
ieee: C. M. Doucet, J. A. Talamas, and M. Hetzer, “Cell cycle-dependent differences
in nuclear pore complex assembly in metazoa,” Cell, vol. 141, no. 6. Elsevier,
pp. 1030–1041, 2010.
ista: Doucet CM, Talamas JA, Hetzer M. 2010. Cell cycle-dependent differences in
nuclear pore complex assembly in metazoa. Cell. 141(6), 1030–1041.
mla: Doucet, Christine M., et al. “Cell Cycle-Dependent Differences in Nuclear Pore
Complex Assembly in Metazoa.” Cell, vol. 141, no. 6, Elsevier, 2010, pp.
1030–41, doi:10.1016/j.cell.2010.04.036.
short: C.M. Doucet, J.A. Talamas, M. Hetzer, Cell 141 (2010) 1030–1041.
date_created: 2022-04-07T07:53:29Z
date_published: 2010-06-11T00:00:00Z
date_updated: 2022-07-18T08:54:52Z
day: '11'
doi: 10.1016/j.cell.2010.04.036
extern: '1'
external_id:
pmid:
- '20550937'
intvolume: ' 141'
issue: '6'
keyword:
- General Biochemistry
- Genetics and Molecular Biology
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1016/j.cell.2010.04.036
month: '06'
oa: 1
oa_version: Published Version
page: 1030-1041
pmid: 1
publication: Cell
publication_identifier:
issn:
- 0092-8674
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Cell cycle-dependent differences in nuclear pore complex assembly in metazoa
type: journal_article
user_id: 72615eeb-f1f3-11ec-aa25-d4573ddc34fd
volume: 141
year: '2010'
...
---
_id: '11102'
abstract:
- lang: eng
text: Nuclear pore complexes have recently been shown to play roles in gene activation;
however their potential involvement in metazoan transcription remains unclear.
Here we show that the nucleoporins Sec13, Nup98, and Nup88, as well as a group
of FG-repeat nucleoporins, bind to the Drosophila genome at functionally distinct
loci that often do not represent nuclear envelope contact sites. Whereas Nup88
localizes to silent loci, Sec13, Nup98, and a subset of FG-repeat nucleoporins
bind to developmentally regulated genes undergoing transcription induction. Strikingly,
RNAi-mediated knockdown of intranuclear Sec13 and Nup98 specifically inhibits
transcription of their target genes and prevents efficient reactivation of transcription
after heat shock, suggesting an essential role of NPC components in regulating
complex gene expression programs of multicellular organisms.
article_processing_charge: No
article_type: original
author:
- first_name: Maya
full_name: Capelson, Maya
last_name: Capelson
- first_name: Yun
full_name: Liang, Yun
last_name: Liang
- first_name: Roberta
full_name: Schulte, Roberta
last_name: Schulte
- first_name: William
full_name: Mair, William
last_name: Mair
- first_name: Ulrich
full_name: Wagner, Ulrich
last_name: Wagner
- first_name: Martin W
full_name: HETZER, Martin W
id: 86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed
last_name: HETZER
orcid: 0000-0002-2111-992X
citation:
ama: Capelson M, Liang Y, Schulte R, Mair W, Wagner U, Hetzer M. Chromatin-bound
nuclear pore components regulate gene expression in higher eukaryotes. Cell.
2010;140(3):372-383. doi:10.1016/j.cell.2009.12.054
apa: Capelson, M., Liang, Y., Schulte, R., Mair, W., Wagner, U., & Hetzer, M.
(2010). Chromatin-bound nuclear pore components regulate gene expression in higher
eukaryotes. Cell. Elsevier. https://doi.org/10.1016/j.cell.2009.12.054
chicago: Capelson, Maya, Yun Liang, Roberta Schulte, William Mair, Ulrich Wagner,
and Martin Hetzer. “Chromatin-Bound Nuclear Pore Components Regulate Gene Expression
in Higher Eukaryotes.” Cell. Elsevier, 2010. https://doi.org/10.1016/j.cell.2009.12.054.
ieee: M. Capelson, Y. Liang, R. Schulte, W. Mair, U. Wagner, and M. Hetzer, “Chromatin-bound
nuclear pore components regulate gene expression in higher eukaryotes,” Cell,
vol. 140, no. 3. Elsevier, pp. 372–383, 2010.
ista: Capelson M, Liang Y, Schulte R, Mair W, Wagner U, Hetzer M. 2010. Chromatin-bound
nuclear pore components regulate gene expression in higher eukaryotes. Cell. 140(3),
372–383.
mla: Capelson, Maya, et al. “Chromatin-Bound Nuclear Pore Components Regulate Gene
Expression in Higher Eukaryotes.” Cell, vol. 140, no. 3, Elsevier, 2010,
pp. 372–83, doi:10.1016/j.cell.2009.12.054.
short: M. Capelson, Y. Liang, R. Schulte, W. Mair, U. Wagner, M. Hetzer, Cell 140
(2010) 372–383.
date_created: 2022-04-07T07:53:36Z
date_published: 2010-02-05T00:00:00Z
date_updated: 2022-07-18T08:55:03Z
day: '05'
doi: 10.1016/j.cell.2009.12.054
extern: '1'
external_id:
pmid:
- '20144761'
intvolume: ' 140'
issue: '3'
keyword:
- General Biochemistry
- Genetics and Molecular Biology
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1016/j.cell.2009.12.054
month: '02'
oa: 1
oa_version: Published Version
page: 372-383
pmid: 1
publication: Cell
publication_identifier:
issn:
- 0092-8674
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Chromatin-bound nuclear pore components regulate gene expression in higher
eukaryotes
type: journal_article
user_id: 72615eeb-f1f3-11ec-aa25-d4573ddc34fd
volume: 140
year: '2010'
...
---
_id: '1752'
abstract:
- lang: eng
text: The epitaxial growth of germanium on silicon leads to the self-assembly of
SiGe nanocrystals by a process that allows the size, composition and position
of the nanocrystals to be controlled. This level of control, combined with an
inherent compatibility with silicon technology, could prove useful in nanoelectronic
applications. Here, we report the confinement of holes in quantum-dot devices
made by directly contacting individual SiGe nanocrystals with aluminium electrodes,
and the production of hybrid superconductor- semiconductor devices, such as resonant
supercurrent transistors, when the quantum dot is strongly coupled to the electrodes.
Charge transport measurements on weakly coupled quantum dots reveal discrete energy
spectra, with the confined hole states displaying anisotropic gyromagnetic factors
and strong spin-orbit coupling with pronounced dependences on gate voltage and
magnetic field.
acknowledgement: We also acknowledge support from the Agence Nationale de la Recherche
(through the ACCESS and COHESION projects). G.K. acknowledges further support from
the Deutsche Forschungsgemeinschaft (grant no. KA 2922/1-1)
author:
- first_name: Georgios
full_name: Georgios Katsaros
id: 38DB5788-F248-11E8-B48F-1D18A9856A87
last_name: Katsaros
- first_name: Panayotis
full_name: Spathis, Panayotis N
last_name: Spathis
- first_name: Mathieu
full_name: Stoffel, Mathieu
last_name: Stoffel
- first_name: Frank
full_name: Fournel, Frank
last_name: Fournel
- first_name: Massimo
full_name: Mongillo, Massimo
last_name: Mongillo
- first_name: Vincent
full_name: Bouchiat, Vincent
last_name: Bouchiat
- first_name: François
full_name: Lefloch, François
last_name: Lefloch
- first_name: Armando
full_name: Rastelli, Armando
last_name: Rastelli
- first_name: Oliver
full_name: Schmidt, Oliver G
last_name: Schmidt
- first_name: Silvano
full_name: De Franceschi, Silvano
last_name: De Franceschi
citation:
ama: Katsaros G, Spathis P, Stoffel M, et al. Hybrid superconductor-semiconductor
devices made from self-assembled SiGe nanocrystals on silicon. Nature Nanotechnology.
2010;5(6):458-464. doi:10.1038/nnano.2010.84
apa: Katsaros, G., Spathis, P., Stoffel, M., Fournel, F., Mongillo, M., Bouchiat,
V., … De Franceschi, S. (2010). Hybrid superconductor-semiconductor devices made
from self-assembled SiGe nanocrystals on silicon. Nature Nanotechnology.
Nature Publishing Group. https://doi.org/10.1038/nnano.2010.84
chicago: Katsaros, Georgios, Panayotis Spathis, Mathieu Stoffel, Frank Fournel,
Massimo Mongillo, Vincent Bouchiat, François Lefloch, Armando Rastelli, Oliver
Schmidt, and Silvano De Franceschi. “Hybrid Superconductor-Semiconductor Devices
Made from Self-Assembled SiGe Nanocrystals on Silicon.” Nature Nanotechnology.
Nature Publishing Group, 2010. https://doi.org/10.1038/nnano.2010.84.
ieee: G. Katsaros et al., “Hybrid superconductor-semiconductor devices made
from self-assembled SiGe nanocrystals on silicon,” Nature Nanotechnology,
vol. 5, no. 6. Nature Publishing Group, pp. 458–464, 2010.
ista: Katsaros G, Spathis P, Stoffel M, Fournel F, Mongillo M, Bouchiat V, Lefloch
F, Rastelli A, Schmidt O, De Franceschi S. 2010. Hybrid superconductor-semiconductor
devices made from self-assembled SiGe nanocrystals on silicon. Nature Nanotechnology.
5(6), 458–464.
mla: Katsaros, Georgios, et al. “Hybrid Superconductor-Semiconductor Devices Made
from Self-Assembled SiGe Nanocrystals on Silicon.” Nature Nanotechnology,
vol. 5, no. 6, Nature Publishing Group, 2010, pp. 458–64, doi:10.1038/nnano.2010.84.
short: G. Katsaros, P. Spathis, M. Stoffel, F. Fournel, M. Mongillo, V. Bouchiat,
F. Lefloch, A. Rastelli, O. Schmidt, S. De Franceschi, Nature Nanotechnology 5
(2010) 458–464.
date_created: 2018-12-11T11:53:49Z
date_published: 2010-06-01T00:00:00Z
date_updated: 2021-01-12T06:52:59Z
day: '01'
doi: 10.1038/nnano.2010.84
extern: 1
intvolume: ' 5'
issue: '6'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1005.1816
month: '06'
oa: 1
page: 458 - 464
publication: Nature Nanotechnology
publication_status: published
publisher: Nature Publishing Group
publist_id: '5372'
quality_controlled: 0
status: public
title: Hybrid superconductor-semiconductor devices made from self-assembled SiGe nanocrystals
on silicon
type: journal_article
volume: 5
year: '2010'
...
---
_id: '1753'
abstract:
- lang: eng
text: We investigate electronic transport in n-i-n GaN nanowires with and without
AlN double barriers. The nanowires are grown by catalyst-free, plasma-assisted
molecular beam epitaxy enabling abrupt GaN/AlN interfaces as well as longitudinal
n-type doping modulation. At low temperature, transport in n-i-n GaN nanowires
is dominated by the Coulomb blockade effect. Carriers are confined in the undoped
middle region, forming single or multiple islands with a characteristic length
of ∼100 nm. The incorporation of two AlN tunnel barriers causes confinement to
occur within the GaN dot in between. In the case of a 6 nm thick dot and 2 nm
thick barriers, we observe characteristic signatures of Coulomb-blockaded transport
in single quantum dots with discrete energy states. For thinner dots and barriers,
Coulomb-blockade effects do not play a significant role while the onset of resonant
tunneling via the confined quantum levels is accompanied by a negative differential
resistance surviving up to ∼150 K.
acknowledgement: This research was partly funded by the Agence Nationale de la Recherche
through the COHESION project. G.K. acknowledges further support from the Deutsche
Forschungsgemeinschaft (Grant KA 2922/1-1)
author:
- first_name: Rudeeson
full_name: Songmuang, Rudeeson
last_name: Songmuang
- first_name: Georgios
full_name: Georgios Katsaros
id: 38DB5788-F248-11E8-B48F-1D18A9856A87
last_name: Katsaros
- first_name: Eva
full_name: Monroy, Eva
last_name: Monroy
- first_name: Panayotis
full_name: Spathis, Panayotis N
last_name: Spathis
- first_name: Catherine
full_name: Bougerol, Catherine
last_name: Bougerol
- first_name: Massimo
full_name: Mongillo, Massimo
last_name: Mongillo
- first_name: Silvano
full_name: De Franceschi, Silvano
last_name: De Franceschi
citation:
ama: Songmuang R, Katsaros G, Monroy E, et al. Quantum transport in GaN/AlN double-barrier
heterostructure nanowires. Nano Letters. 2010;10(9):3545-3550. doi:10.1021/nl1017578
apa: Songmuang, R., Katsaros, G., Monroy, E., Spathis, P., Bougerol, C., Mongillo,
M., & De Franceschi, S. (2010). Quantum transport in GaN/AlN double-barrier
heterostructure nanowires. Nano Letters. American Chemical Society. https://doi.org/10.1021/nl1017578
chicago: Songmuang, Rudeeson, Georgios Katsaros, Eva Monroy, Panayotis Spathis,
Catherine Bougerol, Massimo Mongillo, and Silvano De Franceschi. “Quantum Transport
in GaN/AlN Double-Barrier Heterostructure Nanowires.” Nano Letters. American
Chemical Society, 2010. https://doi.org/10.1021/nl1017578.
ieee: R. Songmuang et al., “Quantum transport in GaN/AlN double-barrier heterostructure
nanowires,” Nano Letters, vol. 10, no. 9. American Chemical Society, pp.
3545–3550, 2010.
ista: Songmuang R, Katsaros G, Monroy E, Spathis P, Bougerol C, Mongillo M, De Franceschi
S. 2010. Quantum transport in GaN/AlN double-barrier heterostructure nanowires.
Nano Letters. 10(9), 3545–3550.
mla: Songmuang, Rudeeson, et al. “Quantum Transport in GaN/AlN Double-Barrier Heterostructure
Nanowires.” Nano Letters, vol. 10, no. 9, American Chemical Society, 2010,
pp. 3545–50, doi:10.1021/nl1017578.
short: R. Songmuang, G. Katsaros, E. Monroy, P. Spathis, C. Bougerol, M. Mongillo,
S. De Franceschi, Nano Letters 10 (2010) 3545–3550.
date_created: 2018-12-11T11:53:49Z
date_published: 2010-09-08T00:00:00Z
date_updated: 2021-01-12T06:52:59Z
day: '08'
doi: 10.1021/nl1017578
extern: 1
intvolume: ' 10'
issue: '9'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1005.3637
month: '09'
oa: 1
page: 3545 - 3550
publication: Nano Letters
publication_status: published
publisher: American Chemical Society
publist_id: '5371'
quality_controlled: 0
status: public
title: Quantum transport in GaN/AlN double-barrier heterostructure nanowires
type: journal_article
volume: 10
year: '2010'
...
---
_id: '1773'
abstract:
- lang: eng
text: The quantum properties of electromagnetic, mechanical or other harmonic oscillators
can be revealed by investigating their strong coherent coupling to a single quantum
two level system in an approach known as cavity quantum electrodynamics (QED).
At temperatures much lower than the characteristic energy level spacing the observation
of vacuum Rabi oscillations or mode splittings with one or a few quanta asserts
the quantum nature of the oscillator. Here, we study how the classical response
of a cavity QED system emerges from the quantum one when its thermal occupation-or
effective temperature-is raised gradually over 5 orders of magnitude. In this
way we explore in detail the continuous quantum-to-classical crossover and demonstrate
how to extract effective cavity field temperatures from both spectroscopic and
time-resolved vacuum Rabi measurements.
acknowledgement: This work was supported by SNF, EuroSQIP and ETHZ. L. S. B. acknowledges
support by LPS/NSA under ARO contract No. W911NF-05-1-0365 and the NSF under grant
No. DMR-0653377
author:
- first_name: Johannes M
full_name: Johannes Fink
id: 4B591CBA-F248-11E8-B48F-1D18A9856A87
last_name: Fink
orcid: 0000-0001-8112-028X
- first_name: L.
full_name: Steffen, L. Kraig
last_name: Steffen
- first_name: Peter
full_name: Studer, Peter
last_name: Studer
- first_name: Lev
full_name: Bishop, Lev S
last_name: Bishop
- first_name: Matthias
full_name: Baur, Matthias P
last_name: Baur
- first_name: R
full_name: Bianchetti, R
last_name: Bianchetti
- first_name: Deniz
full_name: Bozyigit, Deniz
last_name: Bozyigit
- first_name: C
full_name: Lang, C
last_name: Lang
- first_name: Stefan
full_name: Filipp, Stefan
last_name: Filipp
- first_name: Peter
full_name: Leek, Peter J
last_name: Leek
- first_name: Andreas
full_name: Wallraff, Andreas
last_name: Wallraff
citation:
ama: Fink JM, Steffen L, Studer P, et al. Quantum-to-classical transition in cavity
quantum electrodynamics. Physical Review Letters. 2010;105(16). doi:10.1103/PhysRevLett.105.163601
apa: Fink, J. M., Steffen, L., Studer, P., Bishop, L., Baur, M., Bianchetti, R.,
… Wallraff, A. (2010). Quantum-to-classical transition in cavity quantum electrodynamics.
Physical Review Letters. American Physical Society. https://doi.org/10.1103/PhysRevLett.105.163601
chicago: Fink, Johannes M, L. Steffen, Peter Studer, Lev Bishop, Matthias Baur,
R Bianchetti, Deniz Bozyigit, et al. “Quantum-to-Classical Transition in Cavity
Quantum Electrodynamics.” Physical Review Letters. American Physical Society,
2010. https://doi.org/10.1103/PhysRevLett.105.163601.
ieee: J. M. Fink et al., “Quantum-to-classical transition in cavity quantum
electrodynamics,” Physical Review Letters, vol. 105, no. 16. American Physical
Society, 2010.
ista: Fink JM, Steffen L, Studer P, Bishop L, Baur M, Bianchetti R, Bozyigit D,
Lang C, Filipp S, Leek P, Wallraff A. 2010. Quantum-to-classical transition in
cavity quantum electrodynamics. Physical Review Letters. 105(16).
mla: Fink, Johannes M., et al. “Quantum-to-Classical Transition in Cavity Quantum
Electrodynamics.” Physical Review Letters, vol. 105, no. 16, American Physical
Society, 2010, doi:10.1103/PhysRevLett.105.163601.
short: J.M. Fink, L. Steffen, P. Studer, L. Bishop, M. Baur, R. Bianchetti, D. Bozyigit,
C. Lang, S. Filipp, P. Leek, A. Wallraff, Physical Review Letters 105 (2010).
date_created: 2018-12-11T11:53:56Z
date_published: 2010-10-14T00:00:00Z
date_updated: 2021-01-12T06:53:07Z
day: '14'
doi: 10.1103/PhysRevLett.105.163601
extern: 1
intvolume: ' 105'
issue: '16'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1003.1161
month: '10'
oa: 1
publication: Physical Review Letters
publication_status: published
publisher: American Physical Society
publist_id: '5343'
quality_controlled: 0
status: public
title: Quantum-to-classical transition in cavity quantum electrodynamics
type: journal_article
volume: 105
year: '2010'
...
---
_id: '1774'
abstract:
- lang: eng
text: A number of superconducting qubits, such as the transmon or the phase qubit,
have an energy level structure with small anharmonicity. This allows for convenient
access of higher excited states with similar frequencies. However, special care
has to be taken to avoid unwanted higher-level populations when using short control
pulses. Here we demonstrate the preparation of arbitrary three level superposition
states using optimal control techniques in a transmon. Performing dispersive readout,
we extract the populations of all three levels of the qutrit and study the coherence
of its excited states. Finally we demonstrate full quantum state tomography of
the prepared qutrit states and evaluate the fidelities of a set of states, finding
on average 95%.
acknowledgement: This work was supported by SNF, ETHZ, the Austrian Science Foundation
(FWF), and the EU projects SOLID and GEOMDISS. A. B. is supported by NSERC, the
Alfred P. Sloan Foundation, and CIFAR
author:
- first_name: R
full_name: Bianchetti, R
last_name: Bianchetti
- first_name: Stefan
full_name: Filipp, Stefan
last_name: Filipp
- first_name: Matthias
full_name: Baur, Matthias P
last_name: Baur
- first_name: Johannes M
full_name: Johannes Fink
id: 4B591CBA-F248-11E8-B48F-1D18A9856A87
last_name: Fink
orcid: 0000-0001-8112-028X
- first_name: C
full_name: Lang, C
last_name: Lang
- first_name: L.
full_name: Steffen, L. Kraig
last_name: Steffen
- first_name: Maxime
full_name: Boissonneault, Maxime
last_name: Boissonneault
- first_name: Alexandre
full_name: Blais, Alexandre
last_name: Blais
- first_name: Andreas
full_name: Wallraff, Andreas
last_name: Wallraff
citation:
ama: Bianchetti R, Filipp S, Baur M, et al. Control and tomography of a three level
superconducting artificial atom. Physical Review Letters. 2010;105(22).
doi:10.1103/PhysRevLett.105.223601
apa: Bianchetti, R., Filipp, S., Baur, M., Fink, J. M., Lang, C., Steffen, L., …
Wallraff, A. (2010). Control and tomography of a three level superconducting artificial
atom. Physical Review Letters. American Physical Society. https://doi.org/10.1103/PhysRevLett.105.223601
chicago: Bianchetti, R, Stefan Filipp, Matthias Baur, Johannes M Fink, C Lang, L.
Steffen, Maxime Boissonneault, Alexandre Blais, and Andreas Wallraff. “Control
and Tomography of a Three Level Superconducting Artificial Atom.” Physical
Review Letters. American Physical Society, 2010. https://doi.org/10.1103/PhysRevLett.105.223601.
ieee: R. Bianchetti et al., “Control and tomography of a three level superconducting
artificial atom,” Physical Review Letters, vol. 105, no. 22. American Physical
Society, 2010.
ista: Bianchetti R, Filipp S, Baur M, Fink JM, Lang C, Steffen L, Boissonneault
M, Blais A, Wallraff A. 2010. Control and tomography of a three level superconducting
artificial atom. Physical Review Letters. 105(22).
mla: Bianchetti, R., et al. “Control and Tomography of a Three Level Superconducting
Artificial Atom.” Physical Review Letters, vol. 105, no. 22, American Physical
Society, 2010, doi:10.1103/PhysRevLett.105.223601.
short: R. Bianchetti, S. Filipp, M. Baur, J.M. Fink, C. Lang, L. Steffen, M. Boissonneault,
A. Blais, A. Wallraff, Physical Review Letters 105 (2010).
date_created: 2018-12-11T11:53:56Z
date_published: 2010-11-24T00:00:00Z
date_updated: 2021-01-12T06:53:07Z
day: '24'
doi: 10.1103/PhysRevLett.105.223601
extern: 1
intvolume: ' 105'
issue: '22'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1004.5504
month: '11'
oa: 1
publication: Physical Review Letters
publication_status: published
publisher: American Physical Society
publist_id: '5341'
quality_controlled: 0
status: public
title: Control and tomography of a three level superconducting artificial atom
type: journal_article
volume: 105
year: '2010'
...
---
_id: '2095'
abstract:
- lang: eng
text: This paper describes a passive stereo system for capturing the 3D geometry
of a face in a single-shot under standard light sources. The system is low-cost
and easy to deploy. Results are submillimeter accurate and commensurate with those
from state-ofthe-art systems based on active lighting, and the models meet the
quality requirements of a demanding domain like the movie industry. Recovered
models are shown for captures from both high-end cameras in a studio setting and
from a consumer binocular-stereo camera, demonstrating scalability across a spectrum
of camera deployments, and showing the potential for 3D face modeling to move
beyond the professional arena and into the emerging consumer market in stereoscopic
photography. Our primary technical contribution is a modification of standard
stereo refinement methods to capture pore-scale geometry, using a qualitative
approach that produces visually realistic results. The second technical contribution
is a calibration method suited to face capture systems. The systemic contribution
includes multiple demonstrations of system robustness and quality. These include
capture in a studio setup, capture off a consumer binocular-stereo camera, scanning
of faces of varying gender and ethnicity and age, capture of highly-transient
facial expression, and scanning a physical mask to provide ground-truth validation.
author:
- first_name: Thabo
full_name: Beeler, Thabo
last_name: Beeler
- first_name: Bernd
full_name: Bernd Bickel
id: 49876194-F248-11E8-B48F-1D18A9856A87
last_name: Bickel
orcid: 0000-0001-6511-9385
- first_name: Paul
full_name: Beardsley, Paul A
last_name: Beardsley
- first_name: Bob
full_name: Sumner, Bob
last_name: Sumner
- first_name: Markus
full_name: Groß, Markus S
last_name: Groß
citation:
ama: Beeler T, Bickel B, Beardsley P, Sumner B, Groß M. High-quality single-shot
capture of facial geometry. ACM Transactions on Graphics. 2010;29(4). doi:10.1145/1778765.1778777
apa: Beeler, T., Bickel, B., Beardsley, P., Sumner, B., & Groß, M. (2010). High-quality
single-shot capture of facial geometry. ACM Transactions on Graphics. ACM.
https://doi.org/10.1145/1778765.1778777
chicago: Beeler, Thabo, Bernd Bickel, Paul Beardsley, Bob Sumner, and Markus Groß.
“High-Quality Single-Shot Capture of Facial Geometry.” ACM Transactions on
Graphics. ACM, 2010. https://doi.org/10.1145/1778765.1778777.
ieee: T. Beeler, B. Bickel, P. Beardsley, B. Sumner, and M. Groß, “High-quality
single-shot capture of facial geometry,” ACM Transactions on Graphics,
vol. 29, no. 4. ACM, 2010.
ista: Beeler T, Bickel B, Beardsley P, Sumner B, Groß M. 2010. High-quality single-shot
capture of facial geometry. ACM Transactions on Graphics. 29(4).
mla: Beeler, Thabo, et al. “High-Quality Single-Shot Capture of Facial Geometry.”
ACM Transactions on Graphics, vol. 29, no. 4, ACM, 2010, doi:10.1145/1778765.1778777.
short: T. Beeler, B. Bickel, P. Beardsley, B. Sumner, M. Groß, ACM Transactions
on Graphics 29 (2010).
date_created: 2018-12-11T11:55:41Z
date_published: 2010-01-01T00:00:00Z
date_updated: 2021-01-12T06:55:16Z
day: '01'
doi: 10.1145/1778765.1778777
extern: 1
intvolume: ' 29'
issue: '4'
main_file_link:
- open_access: '1'
url: http://e-collection.library.ethz.ch/view/eth:5079
month: '01'
oa: 1
publication: ACM Transactions on Graphics
publication_status: published
publisher: ACM
publist_id: '4938'
quality_controlled: 0
status: public
title: High-quality single-shot capture of facial geometry
type: journal_article
volume: 29
year: '2010'
...
---
_id: '2124'
abstract:
- lang: eng
text: We develop a theory of Malliavin calculus for Banach space-valued random variables.
Using radonifying operators instead of symmetric tensor products we extend the
Wiener-Itô isometry to Banach spaces. In the white noise case we obtain two sided
Lp-estimates for multiple stochastic integrals in arbitrary Banach spaces. It
is shown that the Malliavin derivative is bounded on vector-valued Wiener-Itô
chaoses. Our main tools are decoupling inequalities for vector-valued random variables.
In the opposite direction we use Meyer's inequalities to give a new proof of a
decoupling result for Gaussian chaoses in UMD Banach spaces.
acknowledgement: The author acknowledges support by the ‘VIDI subsidie’ 639.032.201
of the Netherlands Organisation for Scientific Research (NWO) and the ARC Discovery
Grant DP0558539.
author:
- first_name: Jan
full_name: Jan Maas
id: 4C5696CE-F248-11E8-B48F-1D18A9856A87
last_name: Maas
orcid: 0000-0002-0845-1338
citation:
ama: Maas J. Malliavin calculus and decoupling inequalities in Banach spaces. Journal
of Mathematical Analysis and Applications. 2010;363(2):383-398. doi:10.1016/j.jmaa.2009.08.041
apa: Maas, J. (2010). Malliavin calculus and decoupling inequalities in Banach spaces.
Journal of Mathematical Analysis and Applications. Academic Press. https://doi.org/10.1016/j.jmaa.2009.08.041
chicago: Maas, Jan. “Malliavin Calculus and Decoupling Inequalities in Banach Spaces.”
Journal of Mathematical Analysis and Applications. Academic Press, 2010.
https://doi.org/10.1016/j.jmaa.2009.08.041.
ieee: J. Maas, “Malliavin calculus and decoupling inequalities in Banach spaces,”
Journal of Mathematical Analysis and Applications, vol. 363, no. 2. Academic
Press, pp. 383–398, 2010.
ista: Maas J. 2010. Malliavin calculus and decoupling inequalities in Banach spaces.
Journal of Mathematical Analysis and Applications. 363(2), 383–398.
mla: Maas, Jan. “Malliavin Calculus and Decoupling Inequalities in Banach Spaces.”
Journal of Mathematical Analysis and Applications, vol. 363, no. 2, Academic
Press, 2010, pp. 383–98, doi:10.1016/j.jmaa.2009.08.041.
short: J. Maas, Journal of Mathematical Analysis and Applications 363 (2010) 383–398.
date_created: 2018-12-11T11:55:51Z
date_published: 2010-03-15T00:00:00Z
date_updated: 2021-01-12T06:55:27Z
day: '15'
doi: 10.1016/j.jmaa.2009.08.041
extern: 1
intvolume: ' 363'
issue: '2'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/0801.2899
month: '03'
oa: 1
page: 383 - 398
publication: Journal of Mathematical Analysis and Applications
publication_status: published
publisher: Academic Press
publist_id: '4912'
quality_controlled: 0
status: public
title: Malliavin calculus and decoupling inequalities in Banach spaces
type: journal_article
volume: 363
year: '2010'
...
---
_id: '2194'
abstract:
- lang: eng
text: We develop an analytic model of vector correlations in rotationally inelastic
atom-diatom collisions and test it against the much examined Ar-NO (X2Π) system.
Based on the Fraunhofer scattering of matter waves, the model furnishes complex
scattering amplitudes needed to evaluate the polarization moments characterizing
the quantum stereodynamics. The analytic polarization moments are found to be
in an excellent agreement with experimental results and with close-coupling calculations
available at thermal energies. The model reveals that the stereodynamics is governed
by diffraction from the repulsive core of the Ar-NO potential, which can be characterized
by a single Legendre moment.
author:
- first_name: Mikhail
full_name: Mikhail Lemeshko
id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
last_name: Lemeshko
orcid: 0000-0002-6990-7802
- first_name: Břetislav
full_name: Friedrich, Břetislav
last_name: Friedrich
citation:
ama: Lemeshko M, Friedrich B. An analytic model of the stereodynamics of rotationally
inelastic molecular collisions. Physical Chemistry Chemical Physics. 2010;12(5):1038-1041.
doi:10.1039/B920899B
apa: Lemeshko, M., & Friedrich, B. (2010). An analytic model of the stereodynamics
of rotationally inelastic molecular collisions. Physical Chemistry Chemical
Physics. Royal Society of Chemistry. https://doi.org/10.1039/B920899B
chicago: Lemeshko, Mikhail, and Břetislav Friedrich. “An Analytic Model of the Stereodynamics
of Rotationally Inelastic Molecular Collisions.” Physical Chemistry Chemical
Physics. Royal Society of Chemistry, 2010. https://doi.org/10.1039/B920899B .
ieee: M. Lemeshko and B. Friedrich, “An analytic model of the stereodynamics of
rotationally inelastic molecular collisions,” Physical Chemistry Chemical Physics,
vol. 12, no. 5. Royal Society of Chemistry, pp. 1038–1041, 2010.
ista: Lemeshko M, Friedrich B. 2010. An analytic model of the stereodynamics of
rotationally inelastic molecular collisions. Physical Chemistry Chemical Physics.
12(5), 1038–1041.
mla: Lemeshko, Mikhail, and Břetislav Friedrich. “An Analytic Model of the Stereodynamics
of Rotationally Inelastic Molecular Collisions.” Physical Chemistry Chemical
Physics, vol. 12, no. 5, Royal Society of Chemistry, 2010, pp. 1038–41, doi:10.1039/B920899B .
short: M. Lemeshko, B. Friedrich, Physical Chemistry Chemical Physics 12 (2010)
1038–1041.
date_created: 2018-12-11T11:56:15Z
date_published: 2010-02-07T00:00:00Z
date_updated: 2021-01-12T06:55:54Z
day: '07'
doi: '10.1039/B920899B '
extern: 1
intvolume: ' 12'
issue: '5'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/0910.0952
month: '02'
oa: 1
page: 1038 - 1041
publication: Physical Chemistry Chemical Physics
publication_status: published
publisher: Royal Society of Chemistry
publist_id: '4780'
quality_controlled: 0
status: public
title: An analytic model of the stereodynamics of rotationally inelastic molecular
collisions
type: journal_article
volume: 12
year: '2010'
...
---
_id: '2195'
abstract:
- lang: eng
text: 'Following upon our recent work on vector correlations in the Ar-NO collisions
[Lemeshko and Friedrich, Phys. Chem. Chem. Phys. 12, 1038 (2010)], we compare
model results with close-coupling calculations for a range of channels and collision
energies for the He-NO system. The striking agreement between the model and exact
polarization moments indicates that the stereodynamics of rotationally inelastic
atom-molecule collisions at thermal energies is governed by diffraction of matter
waves from a two-dimensional repulsive core of the atom-molecule potential. Furthermore,
the model polarization moments characterizing the He-NO, He- O2, He-OH, and He-CaH
stereodynamics are found to coalesce into a single, distinctive pattern, which
can serve as a "fingerprint" to identify diffraction-driven stereodynamics
in future work. '
acknowledgement: Financial support of the Spanish Ministry of Science and Innovation
(Grant No. CTQ2008-02578) is gratefully acknowledged.
author:
- first_name: Mikhail
full_name: Mikhail Lemeshko
id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
last_name: Lemeshko
orcid: 0000-0002-6990-7802
- first_name: Pablo
full_name: Jambrina, Pablo G
last_name: Jambrina
- first_name: Marcelo
full_name: De Miranda, Marcelo P
last_name: De Miranda
- first_name: Břetislav
full_name: Friedrich, Břetislav
last_name: Friedrich
citation:
ama: 'Lemeshko M, Jambrina P, De Miranda M, Friedrich B. Communications: When diffraction
rules the stereodynamics of rotationally inelastic collisions. Journal of Chemical
Physics. 2010;132(16). doi:10.1063/1.3386530'
apa: 'Lemeshko, M., Jambrina, P., De Miranda, M., & Friedrich, B. (2010). Communications:
When diffraction rules the stereodynamics of rotationally inelastic collisions.
Journal of Chemical Physics. American Institute of Physics. https://doi.org/10.1063/1.3386530'
chicago: 'Lemeshko, Mikhail, Pablo Jambrina, Marcelo De Miranda, and Břetislav Friedrich.
“Communications: When Diffraction Rules the Stereodynamics of Rotationally Inelastic
Collisions.” Journal of Chemical Physics. American Institute of Physics,
2010. https://doi.org/10.1063/1.3386530.'
ieee: 'M. Lemeshko, P. Jambrina, M. De Miranda, and B. Friedrich, “Communications:
When diffraction rules the stereodynamics of rotationally inelastic collisions,”
Journal of Chemical Physics, vol. 132, no. 16. American Institute of Physics,
2010.'
ista: 'Lemeshko M, Jambrina P, De Miranda M, Friedrich B. 2010. Communications:
When diffraction rules the stereodynamics of rotationally inelastic collisions.
Journal of Chemical Physics. 132(16).'
mla: 'Lemeshko, Mikhail, et al. “Communications: When Diffraction Rules the Stereodynamics
of Rotationally Inelastic Collisions.” Journal of Chemical Physics, vol.
132, no. 16, American Institute of Physics, 2010, doi:10.1063/1.3386530.'
short: M. Lemeshko, P. Jambrina, M. De Miranda, B. Friedrich, Journal of Chemical
Physics 132 (2010).
date_created: 2018-12-11T11:56:16Z
date_published: 2010-04-28T00:00:00Z
date_updated: 2021-01-12T06:55:54Z
day: '28'
doi: 10.1063/1.3386530
extern: 1
intvolume: ' 132'
issue: '16'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1002.1572
month: '04'
oa: 1
publication: Journal of Chemical Physics
publication_status: published
publisher: American Institute of Physics
publist_id: '4779'
quality_controlled: 0
status: public
title: 'Communications: When diffraction rules the stereodynamics of rotationally
inelastic collisions'
type: journal_article
volume: 132
year: '2010'
...
---
_id: '2196'
abstract:
- lang: eng
text: We evaluate the shifts imparted to vibrational and rotational levels of a
linear molecule by a nonresonant laser field at intensities of up to 10 12 W/cm2.
Both types of shift are found to be either positive or negative, depending on
the initial rotational state acted upon by the field. An adiabatic field-molecule
interaction imparts a rotational energy shift which is negative and exceeds the
concomitant positive vibrational shift by a few orders of magnitude. The rovibrational
states are thus pushed downward in such a field. A nonresonant pulsed laser field
that interacts nonadiabatically with the molecule is found to impart rotational
and vibrational shifts of the same order of magnitude. The nonadiabatic energy
transfer occurs most readily at a pulse duration which amounts to about a tenth
of the molecule's rotational period and vanishes when the sudden regime is attained
for shorter pulses. We applied our treatment to the much-studied 87Rb2 molecule
in the last bound vibrational levels of its lowest singlet and triplet electronic
states. Our calculations indicate that 15 and 1.5 ns laser pulses of an intensity
in excess of 5 × 109 W/cm2 are capable of dissociating the molecule due to the
vibrational shift. Lesser shifts can be used to fine-tune the rovibrational levels
and thereby affect collisional resonances by the nonresonant light. The energy
shifts due to laser intensities of 109 W/cm2 may be discernible spectroscopically,
with a 10 MHz resolution.
author:
- first_name: Mikhail
full_name: Mikhail Lemeshko
id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
last_name: Lemeshko
orcid: 0000-0002-6990-7802
- first_name: Břetislav
full_name: Friedrich, Břetislav
last_name: Friedrich
citation:
ama: Lemeshko M, Friedrich B. Fine-tuning molecular energy levels by nonresonant
laser pulses. Journal of Physical Chemistry A. 2010;114(36):9848-9854.
doi:10.1021/jp1032299
apa: Lemeshko, M., & Friedrich, B. (2010). Fine-tuning molecular energy levels
by nonresonant laser pulses. Journal of Physical Chemistry A. American
Chemical Society. https://doi.org/10.1021/jp1032299
chicago: Lemeshko, Mikhail, and Břetislav Friedrich. “Fine-Tuning Molecular Energy
Levels by Nonresonant Laser Pulses.” Journal of Physical Chemistry A. American
Chemical Society, 2010. https://doi.org/10.1021/jp1032299.
ieee: M. Lemeshko and B. Friedrich, “Fine-tuning molecular energy levels by nonresonant
laser pulses,” Journal of Physical Chemistry A, vol. 114, no. 36. American
Chemical Society, pp. 9848–9854, 2010.
ista: Lemeshko M, Friedrich B. 2010. Fine-tuning molecular energy levels by nonresonant
laser pulses. Journal of Physical Chemistry A. 114(36), 9848–9854.
mla: Lemeshko, Mikhail, and Břetislav Friedrich. “Fine-Tuning Molecular Energy Levels
by Nonresonant Laser Pulses.” Journal of Physical Chemistry A, vol. 114,
no. 36, American Chemical Society, 2010, pp. 9848–54, doi:10.1021/jp1032299.
short: M. Lemeshko, B. Friedrich, Journal of Physical Chemistry A 114 (2010) 9848–9854.
date_created: 2018-12-11T11:56:16Z
date_published: 2010-09-16T00:00:00Z
date_updated: 2021-01-12T06:55:55Z
day: '16'
doi: 10.1021/jp1032299
extern: 1
intvolume: ' 114'
issue: '36'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1004.1742
month: '09'
oa: 1
page: 9848 - 9854
publication: Journal of Physical Chemistry A
publication_status: published
publisher: American Chemical Society
publist_id: '4777'
quality_controlled: 0
status: public
title: Fine-tuning molecular energy levels by nonresonant laser pulses
type: journal_article
volume: 114
year: '2010'
...
---
_id: '2197'
abstract:
- lang: eng
text: We present an analytic model of the refractive index for matter waves propagating
through atomic or molecular gases. The model, which combines the Wentzel-Kramers-Brillouin
(WKB) treatment of the long-range attraction with the Fraunhofer model treatment
of the short-range repulsion, furnishes a refractive index in compelling agreement
with recent experiments of Jacquey [Phys. Rev. Lett.PRLTAO0031-900710.1103/PhysRevLett.98.240405
98, 240405 (2007)] on Li atom matter waves passing through dilute noble gases.
We show that the diffractive contribution, which arises from scattering by a two-dimensional
"hard core" of the potential, is essential for obtaining a correct imaginary
part of the refractive index.
author:
- first_name: Mikhail
full_name: Mikhail Lemeshko
id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
last_name: Lemeshko
orcid: 0000-0002-6990-7802
- first_name: Břetislav
full_name: Friedrich, Břetislav
last_name: Friedrich
citation:
ama: 'Lemeshko M, Friedrich B. Multiple scattering of matter waves: An analytic
model of the refractive index for atomic and molecular gases. Physical Review
A - Atomic, Molecular, and Optical Physics. 2010;82(2). doi:10.1103/PhysRevA.82.022711'
apa: 'Lemeshko, M., & Friedrich, B. (2010). Multiple scattering of matter waves:
An analytic model of the refractive index for atomic and molecular gases. Physical
Review A - Atomic, Molecular, and Optical Physics. American Physical Society.
https://doi.org/10.1103/PhysRevA.82.022711'
chicago: 'Lemeshko, Mikhail, and Břetislav Friedrich. “Multiple Scattering of Matter
Waves: An Analytic Model of the Refractive Index for Atomic and Molecular Gases.”
Physical Review A - Atomic, Molecular, and Optical Physics. American Physical
Society, 2010. https://doi.org/10.1103/PhysRevA.82.022711.'
ieee: 'M. Lemeshko and B. Friedrich, “Multiple scattering of matter waves: An analytic
model of the refractive index for atomic and molecular gases,” Physical Review
A - Atomic, Molecular, and Optical Physics, vol. 82, no. 2. American Physical
Society, 2010.'
ista: 'Lemeshko M, Friedrich B. 2010. Multiple scattering of matter waves: An analytic
model of the refractive index for atomic and molecular gases. Physical Review
A - Atomic, Molecular, and Optical Physics. 82(2).'
mla: 'Lemeshko, Mikhail, and Břetislav Friedrich. “Multiple Scattering of Matter
Waves: An Analytic Model of the Refractive Index for Atomic and Molecular Gases.”
Physical Review A - Atomic, Molecular, and Optical Physics, vol. 82, no.
2, American Physical Society, 2010, doi:10.1103/PhysRevA.82.022711.'
short: M. Lemeshko, B. Friedrich, Physical Review A - Atomic, Molecular, and Optical
Physics 82 (2010).
date_created: 2018-12-11T11:56:16Z
date_published: 2010-08-18T00:00:00Z
date_updated: 2021-01-12T06:55:55Z
day: '18'
doi: 10.1103/PhysRevA.82.022711
extern: 1
intvolume: ' 82'
issue: '2'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1003.0854
month: '08'
oa: 1
publication: Physical Review A - Atomic, Molecular, and Optical Physics
publication_status: published
publisher: American Physical Society
publist_id: '4778'
quality_controlled: 0
status: public
title: 'Multiple scattering of matter waves: An analytic model of the refractive index
for atomic and molecular gases'
type: journal_article
volume: 82
year: '2010'
...
---
_id: '232'
abstract:
- lang: eng
text: We study the average order of the divisor function, as it ranges over the
values of binary quartic forms that are reducible over ℚ.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Régis
full_name: De La Bretèche, Régis
last_name: De La Bretèche
- first_name: Timothy D
full_name: Browning, Timothy D
id: 35827D50-F248-11E8-B48F-1D18A9856A87
last_name: Browning
orcid: 0000-0002-8314-0177
citation:
ama: De La Bretèche R, Browning TD. Le problème des diviseurs pour des formes binaires
de degré 4. Journal fur die Reine und Angewandte Mathematik. 2010;(646):1-44.
doi:10.1515/CRELLE.2010.064
apa: De La Bretèche, R., & Browning, T. D. (2010). Le problème des diviseurs
pour des formes binaires de degré 4. Journal Fur Die Reine Und Angewandte Mathematik.
Walter de Gruyter. https://doi.org/10.1515/CRELLE.2010.064
chicago: De La Bretèche, Régis, and Timothy D Browning. “Le Problème Des Diviseurs
Pour Des Formes Binaires de Degré 4.” Journal Fur Die Reine Und Angewandte
Mathematik. Walter de Gruyter, 2010. https://doi.org/10.1515/CRELLE.2010.064.
ieee: R. De La Bretèche and T. D. Browning, “Le problème des diviseurs pour des
formes binaires de degré 4,” Journal fur die Reine und Angewandte Mathematik,
no. 646. Walter de Gruyter, pp. 1–44, 2010.
ista: De La Bretèche R, Browning TD. 2010. Le problème des diviseurs pour des formes
binaires de degré 4. Journal fur die Reine und Angewandte Mathematik. (646), 1–44.
mla: De La Bretèche, Régis, and Timothy D. Browning. “Le Problème Des Diviseurs
Pour Des Formes Binaires de Degré 4.” Journal Fur Die Reine Und Angewandte
Mathematik, no. 646, Walter de Gruyter, 2010, pp. 1–44, doi:10.1515/CRELLE.2010.064.
short: R. De La Bretèche, T.D. Browning, Journal Fur Die Reine Und Angewandte Mathematik
(2010) 1–44.
date_created: 2018-12-11T11:45:20Z
date_published: 2010-09-17T00:00:00Z
date_updated: 2021-01-12T06:56:45Z
day: '17'
doi: 10.1515/CRELLE.2010.064
extern: '1'
external_id:
arxiv:
- '0808.2340'
issue: '646'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/0808.2340
month: '09'
oa: 1
oa_version: Preprint
page: 1 - 44
publication: Journal fur die Reine und Angewandte Mathematik
publication_status: published
publisher: Walter de Gruyter
publist_id: '7672'
quality_controlled: '1'
status: public
title: Le problème des diviseurs pour des formes binaires de degré 4
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2010'
...
---
_id: '2322'
author:
- first_name: Rupert
full_name: Frank, Rupert L
last_name: Frank
- first_name: Élliott
full_name: Lieb, Élliott H
last_name: Lieb
- first_name: Robert
full_name: Robert Seiringer
id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
last_name: Seiringer
orcid: 0000-0002-6781-0521
citation:
ama: 'Frank R, Lieb É, Seiringer R. Equivalence of Sobolev inequalities and Lieb-Thirring
inequalities. In: World Scientific Publishing; 2010:523-535. doi:10.1142/9789814304634_0045 '
apa: 'Frank, R., Lieb, É., & Seiringer, R. (2010). Equivalence of Sobolev inequalities
and Lieb-Thirring inequalities (pp. 523–535). Presented at the ICMP: International
Congress on Mathematical Physics, World Scientific Publishing. https://doi.org/10.1142/9789814304634_0045 '
chicago: Frank, Rupert, Élliott Lieb, and Robert Seiringer. “ Equivalence of Sobolev
Inequalities and Lieb-Thirring Inequalities,” 523–35. World Scientific Publishing,
2010. https://doi.org/10.1142/9789814304634_0045
.
ieee: 'R. Frank, É. Lieb, and R. Seiringer, “ Equivalence of Sobolev inequalities
and Lieb-Thirring inequalities,” presented at the ICMP: International Congress
on Mathematical Physics, 2010, pp. 523–535.'
ista: 'Frank R, Lieb É, Seiringer R. 2010. Equivalence of Sobolev inequalities
and Lieb-Thirring inequalities. ICMP: International Congress on Mathematical Physics,
523–535.'
mla: Frank, Rupert, et al. Equivalence of Sobolev Inequalities and Lieb-Thirring
Inequalities. World Scientific Publishing, 2010, pp. 523–35, doi:10.1142/9789814304634_0045 .
short: R. Frank, É. Lieb, R. Seiringer, in:, World Scientific Publishing, 2010,
pp. 523–535.
conference:
name: 'ICMP: International Congress on Mathematical Physics'
date_created: 2018-12-11T11:56:59Z
date_published: 2010-03-31T00:00:00Z
date_updated: 2021-01-12T06:56:46Z
day: '31'
doi: '10.1142/9789814304634_0045 '
extern: 1
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/0909.5449
month: '03'
oa: 1
page: 523 - 535
publication_status: published
publisher: World Scientific Publishing
publist_id: '4605'
quality_controlled: 0
status: public
title: ' Equivalence of Sobolev inequalities and Lieb-Thirring inequalities'
type: conference
year: '2010'
...