---
_id: '9591'
abstract:
- lang: eng
  text: We give several results showing that different discrete structures typically
    gain certain spanning substructures (in particular, Hamilton cycles) after a modest
    random perturbation. First, we prove that adding linearly many random edges to
    a dense k-uniform hypergraph ensures the (asymptotically almost sure) existence
    of a perfect matching or a loose Hamilton cycle. The proof involves an interesting
    application of Szemerédi's Regularity Lemma, which might be independently useful.
    We next prove that digraphs with certain strong expansion properties are pancyclic,
    and use this to show that adding a linear number of random edges typically makes
    a dense digraph pancyclic. Finally, we prove that perturbing a certain (minimum-degree-dependent)
    number of random edges in a tournament typically ensures the existence of multiple
    edge-disjoint Hamilton cycles. All our results are tight.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Michael
  full_name: Krivelevich, Michael
  last_name: Krivelevich
- first_name: Matthew Alan
  full_name: Kwan, Matthew Alan
  id: 5fca0887-a1db-11eb-95d1-ca9d5e0453b3
  last_name: Kwan
  orcid: 0000-0002-4003-7567
- first_name: Benny
  full_name: Sudakov, Benny
  last_name: Sudakov
citation:
  ama: Krivelevich M, Kwan MA, Sudakov B. Cycles and matchings in randomly perturbed
    digraphs and hypergraphs. <i>Combinatorics, Probability and Computing</i>. 2016;25(6):909-927.
    doi:<a href="https://doi.org/10.1017/s0963548316000079">10.1017/s0963548316000079</a>
  apa: Krivelevich, M., Kwan, M. A., &#38; Sudakov, B. (2016). Cycles and matchings
    in randomly perturbed digraphs and hypergraphs. <i>Combinatorics, Probability
    and Computing</i>. Cambridge University Press. <a href="https://doi.org/10.1017/s0963548316000079">https://doi.org/10.1017/s0963548316000079</a>
  chicago: Krivelevich, Michael, Matthew Alan Kwan, and Benny Sudakov. “Cycles and
    Matchings in Randomly Perturbed Digraphs and Hypergraphs.” <i>Combinatorics, Probability
    and Computing</i>. Cambridge University Press, 2016. <a href="https://doi.org/10.1017/s0963548316000079">https://doi.org/10.1017/s0963548316000079</a>.
  ieee: M. Krivelevich, M. A. Kwan, and B. Sudakov, “Cycles and matchings in randomly
    perturbed digraphs and hypergraphs,” <i>Combinatorics, Probability and Computing</i>,
    vol. 25, no. 6. Cambridge University Press, pp. 909–927, 2016.
  ista: Krivelevich M, Kwan MA, Sudakov B. 2016. Cycles and matchings in randomly
    perturbed digraphs and hypergraphs. Combinatorics, Probability and Computing.
    25(6), 909–927.
  mla: Krivelevich, Michael, et al. “Cycles and Matchings in Randomly Perturbed Digraphs
    and Hypergraphs.” <i>Combinatorics, Probability and Computing</i>, vol. 25, no.
    6, Cambridge University Press, 2016, pp. 909–27, doi:<a href="https://doi.org/10.1017/s0963548316000079">10.1017/s0963548316000079</a>.
  short: M. Krivelevich, M.A. Kwan, B. Sudakov, Combinatorics, Probability and Computing
    25 (2016) 909–927.
date_created: 2021-06-22T12:35:13Z
date_published: 2016-11-01T00:00:00Z
date_updated: 2023-02-23T14:02:07Z
day: '01'
doi: 10.1017/s0963548316000079
extern: '1'
external_id:
  arxiv:
  - '1501.04816'
intvolume: '        25'
issue: '6'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1501.04816
month: '11'
oa: 1
oa_version: Preprint
page: 909-927
publication: Combinatorics, Probability and Computing
publication_identifier:
  eissn:
  - 1469-2163
  issn:
  - 0963-5483
publication_status: published
publisher: Cambridge University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Cycles and matchings in randomly perturbed digraphs and hypergraphs
type: journal_article
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
volume: 25
year: '2016'
...
---
_id: '9704'
abstract:
- lang: eng
  text: Emerging infectious diseases (EIDs) have contributed significantly to the
    current biodiversity crisis, leading to widespread epidemics and population loss.
    Owing to genetic variation in pathogen virulence, a complete understanding of
    species decline requires the accurate identification and characterization of EIDs.
    We explore this issue in the Western honeybee, where increasing mortality of populations
    in the Northern Hemisphere has caused major concern. Specifically, we investigate
    the importance of genetic identity of the main suspect in mortality, deformed
    wing virus (DWV), in driving honeybee loss. Using laboratory experiments and a
    systematic field survey, we demonstrate that an emerging DWV genotype (DWV-B)
    is more virulent than the established DWV genotype (DWV-A) and is widespread in
    the landscape. Furthermore, we show in a simple model that colonies infected with
    DWV-B collapse sooner than colonies infected with DWV-A. We also identify potential
    for rapid DWV evolution by revealing extensive genome-wide recombination in vivo.
    The emergence of DWV-B in naive honeybee populations, including via recombination
    with DWV-A, could be of significant ecological and economic importance. Our findings
    emphasize that knowledge of pathogen genetic identity and diversity is critical
    to understanding drivers of species decline.
article_processing_charge: No
author:
- first_name: Dino
  full_name: Mcmahon, Dino
  last_name: Mcmahon
- first_name: Myrsini
  full_name: Natsopoulou, Myrsini
  last_name: Natsopoulou
- first_name: Vincent
  full_name: Doublet, Vincent
  last_name: Doublet
- first_name: Matthias
  full_name: Fürst, Matthias
  id: 393B1196-F248-11E8-B48F-1D18A9856A87
  last_name: Fürst
  orcid: 0000-0002-3712-925X
- first_name: Silvio
  full_name: Weging, Silvio
  last_name: Weging
- first_name: Mark
  full_name: Brown, Mark
  last_name: Brown
- first_name: Andreas
  full_name: Gogol Döring, Andreas
  last_name: Gogol Döring
- first_name: Robert
  full_name: Paxton, Robert
  last_name: Paxton
citation:
  ama: 'Mcmahon D, Natsopoulou M, Doublet V, et al. Data from: Elevated virulence
    of an emerging viral genotype as a driver of honeybee loss. 2016. doi:<a href="https://doi.org/10.5061/dryad.cq7t1">10.5061/dryad.cq7t1</a>'
  apa: 'Mcmahon, D., Natsopoulou, M., Doublet, V., Fürst, M., Weging, S., Brown, M.,
    … Paxton, R. (2016). Data from: Elevated virulence of an emerging viral genotype
    as a driver of honeybee loss. Dryad. <a href="https://doi.org/10.5061/dryad.cq7t1">https://doi.org/10.5061/dryad.cq7t1</a>'
  chicago: 'Mcmahon, Dino, Myrsini Natsopoulou, Vincent Doublet, Matthias Fürst, Silvio
    Weging, Mark Brown, Andreas Gogol Döring, and Robert Paxton. “Data from: Elevated
    Virulence of an Emerging Viral Genotype as a Driver of Honeybee Loss.” Dryad,
    2016. <a href="https://doi.org/10.5061/dryad.cq7t1">https://doi.org/10.5061/dryad.cq7t1</a>.'
  ieee: 'D. Mcmahon <i>et al.</i>, “Data from: Elevated virulence of an emerging viral
    genotype as a driver of honeybee loss.” Dryad, 2016.'
  ista: 'Mcmahon D, Natsopoulou M, Doublet V, Fürst M, Weging S, Brown M, Gogol Döring
    A, Paxton R. 2016. Data from: Elevated virulence of an emerging viral genotype
    as a driver of honeybee loss, Dryad, <a href="https://doi.org/10.5061/dryad.cq7t1">10.5061/dryad.cq7t1</a>.'
  mla: 'Mcmahon, Dino, et al. <i>Data from: Elevated Virulence of an Emerging Viral
    Genotype as a Driver of Honeybee Loss</i>. Dryad, 2016, doi:<a href="https://doi.org/10.5061/dryad.cq7t1">10.5061/dryad.cq7t1</a>.'
  short: D. Mcmahon, M. Natsopoulou, V. Doublet, M. Fürst, S. Weging, M. Brown, A.
    Gogol Döring, R. Paxton, (2016).
date_created: 2021-07-23T08:30:38Z
date_published: 2016-05-06T00:00:00Z
date_updated: 2023-02-21T16:54:31Z
day: '06'
department:
- _id: SyCr
doi: 10.5061/dryad.cq7t1
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5061/dryad.cq7t1
month: '05'
oa: 1
oa_version: Published Version
publisher: Dryad
related_material:
  record:
  - id: '1262'
    relation: used_in_publication
    status: public
status: public
title: 'Data from: Elevated virulence of an emerging viral genotype as a driver of
  honeybee loss'
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2016'
...
---
_id: '9710'
abstract:
- lang: eng
  text: Much of quantitative genetics is based on the ‘infinitesimal model’, under
    which selection has a negligible effect on the genetic variance. This is typically
    justified by assuming a very large number of loci with additive effects. However,
    it applies even when genes interact, provided that the number of loci is large
    enough that selection on each of them is weak relative to random drift. In the
    long term, directional selection will change allele frequencies, but even then,
    the effects of epistasis on the ultimate change in trait mean due to selection
    may be modest. Stabilising selection can maintain many traits close to their optima,
    even when the underlying alleles are weakly selected. However, the number of traits
    that can be optimised is apparently limited to ~4Ne by the ‘drift load’, and this
    is hard to reconcile with the apparent complexity of many organisms. Just as for
    the mutation load, this limit can be evaded by a particular form of negative epistasis.
    A more robust limit is set by the variance in reproductive success. This suggests
    that selection accumulates information most efficiently in the infinitesimal regime,
    when selection on individual alleles is weak, and comparable with random drift.
    A review of evidence on selection strength suggests that although most variance
    in fitness may be because of alleles with large Nes, substantial amounts of adaptation
    may be because of alleles in the infinitesimal regime, in which epistasis has
    modest effects.
article_processing_charge: No
author:
- first_name: Nicholas H
  full_name: Barton, Nicholas H
  id: 4880FE40-F248-11E8-B48F-1D18A9856A87
  last_name: Barton
  orcid: 0000-0002-8548-5240
citation:
  ama: 'Barton NH. Data from: How does epistasis influence the response to selection?
    2016. doi:<a href="https://doi.org/10.5061/dryad.s5s7r">10.5061/dryad.s5s7r</a>'
  apa: 'Barton, N. H. (2016). Data from: How does epistasis influence the response
    to selection? Dryad. <a href="https://doi.org/10.5061/dryad.s5s7r">https://doi.org/10.5061/dryad.s5s7r</a>'
  chicago: 'Barton, Nicholas H. “Data from: How Does Epistasis Influence the Response
    to Selection?” Dryad, 2016. <a href="https://doi.org/10.5061/dryad.s5s7r">https://doi.org/10.5061/dryad.s5s7r</a>.'
  ieee: 'N. H. Barton, “Data from: How does epistasis influence the response to selection?”
    Dryad, 2016.'
  ista: 'Barton NH. 2016. Data from: How does epistasis influence the response to
    selection?, Dryad, <a href="https://doi.org/10.5061/dryad.s5s7r">10.5061/dryad.s5s7r</a>.'
  mla: 'Barton, Nicholas H. <i>Data from: How Does Epistasis Influence the Response
    to Selection?</i> Dryad, 2016, doi:<a href="https://doi.org/10.5061/dryad.s5s7r">10.5061/dryad.s5s7r</a>.'
  short: N.H. Barton, (2016).
date_created: 2021-07-23T11:45:47Z
date_published: 2016-09-23T00:00:00Z
date_updated: 2025-05-28T11:57:03Z
day: '23'
department:
- _id: NiBa
doi: 10.5061/dryad.s5s7r
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5061/dryad.s5s7r
month: '09'
oa: 1
oa_version: Published Version
publisher: Dryad
related_material:
  record:
  - id: '1199'
    relation: used_in_publication
    status: public
status: public
title: 'Data from: How does epistasis influence the response to selection?'
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2016'
...
---
_id: '9720'
abstract:
- lang: eng
  text: 'Summary: Declining populations of bee pollinators are a cause of concern,
    with major repercussions for biodiversity loss and food security. RNA viruses
    associated with honeybees represent a potential threat to other insect pollinators,
    but the extent of this threat is poorly understood. This study aims to attain
    a detailed understanding of the current and ongoing risk of emerging infectious
    disease (EID) transmission between managed and wild pollinator species across
    a wide range of RNA viruses. Within a structured large-scale national survey across
    26 independent sites, we quantify the prevalence and pathogen loads of multiple
    RNA viruses in co-occurring managed honeybee (Apis mellifera) and wild bumblebee
    (Bombus spp.) populations. We then construct models that compare virus prevalence
    between wild and managed pollinators. Multiple RNA viruses associated with honeybees
    are widespread in sympatric wild bumblebee populations. Virus prevalence in honeybees
    is a significant predictor of virus prevalence in bumblebees, but we remain cautious
    in speculating over the principle direction of pathogen transmission. We demonstrate
    species-specific differences in prevalence, indicating significant variation in
    disease susceptibility or tolerance. Pathogen loads within individual bumblebees
    may be high and in the case of at least one RNA virus, prevalence is higher in
    wild bumblebees than in managed honeybee populations. Our findings indicate widespread
    transmission of RNA viruses between managed and wild bee pollinators, pointing
    to an interconnected network of potential disease pressures within and among pollinator
    species. In the context of the biodiversity crisis, our study emphasizes the importance
    of targeting a wide range of pathogens and defining host associations when considering
    potential drivers of population decline.'
article_processing_charge: No
author:
- first_name: Dino
  full_name: Mcmahon, Dino
  last_name: Mcmahon
- first_name: Matthias
  full_name: Fürst, Matthias
  id: 393B1196-F248-11E8-B48F-1D18A9856A87
  last_name: Fürst
  orcid: 0000-0002-3712-925X
- first_name: Jesicca
  full_name: Caspar, Jesicca
  last_name: Caspar
- first_name: Panagiotis
  full_name: Theodorou, Panagiotis
  last_name: Theodorou
- first_name: Mark
  full_name: Brown, Mark
  last_name: Brown
- first_name: Robert
  full_name: Paxton, Robert
  last_name: Paxton
citation:
  ama: 'Mcmahon D, Fürst M, Caspar J, Theodorou P, Brown M, Paxton R. Data from: A
    sting in the spit: widespread cross-infection of multiple RNA viruses across wild
    and managed bees. 2016. doi:<a href="https://doi.org/10.5061/dryad.4b565">10.5061/dryad.4b565</a>'
  apa: 'Mcmahon, D., Fürst, M., Caspar, J., Theodorou, P., Brown, M., &#38; Paxton,
    R. (2016). Data from: A sting in the spit: widespread cross-infection of multiple
    RNA viruses across wild and managed bees. Dryad. <a href="https://doi.org/10.5061/dryad.4b565">https://doi.org/10.5061/dryad.4b565</a>'
  chicago: 'Mcmahon, Dino, Matthias Fürst, Jesicca Caspar, Panagiotis Theodorou, Mark
    Brown, and Robert Paxton. “Data from: A Sting in the Spit: Widespread Cross-Infection
    of Multiple RNA Viruses across Wild and Managed Bees.” Dryad, 2016. <a href="https://doi.org/10.5061/dryad.4b565">https://doi.org/10.5061/dryad.4b565</a>.'
  ieee: 'D. Mcmahon, M. Fürst, J. Caspar, P. Theodorou, M. Brown, and R. Paxton, “Data
    from: A sting in the spit: widespread cross-infection of multiple RNA viruses
    across wild and managed bees.” Dryad, 2016.'
  ista: 'Mcmahon D, Fürst M, Caspar J, Theodorou P, Brown M, Paxton R. 2016. Data
    from: A sting in the spit: widespread cross-infection of multiple RNA viruses
    across wild and managed bees, Dryad, <a href="https://doi.org/10.5061/dryad.4b565">10.5061/dryad.4b565</a>.'
  mla: 'Mcmahon, Dino, et al. <i>Data from: A Sting in the Spit: Widespread Cross-Infection
    of Multiple RNA Viruses across Wild and Managed Bees</i>. Dryad, 2016, doi:<a
    href="https://doi.org/10.5061/dryad.4b565">10.5061/dryad.4b565</a>.'
  short: D. Mcmahon, M. Fürst, J. Caspar, P. Theodorou, M. Brown, R. Paxton, (2016).
date_created: 2021-07-26T09:14:19Z
date_published: 2016-01-22T00:00:00Z
date_updated: 2023-02-23T10:17:25Z
day: '22'
department:
- _id: SyCr
doi: 10.5061/dryad.4b565
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5061/dryad.4b565
month: '01'
oa: 1
oa_version: Published Version
publisher: Dryad
related_material:
  record:
  - id: '1855'
    relation: used_in_publication
    status: public
status: public
title: 'Data from: A sting in the spit: widespread cross-infection of multiple RNA
  viruses across wild and managed bees'
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2016'
...
---
_id: '983'
abstract:
- lang: eng
  text: The half-filled Landau level is expected to be approximately particle-hole
    symmetric, which requires an extension of the Halperin-Lee-Read (HLR) theory of
    the compressible state observed at this filling. Recent work indicates that, when
    particle-hole symmetry is preserved, the composite fermions experience a quantized
    π-Berry phase upon winding around the composite Fermi surface, analogous to Dirac
    fermions at the surface of a 3D topological insulator. In contrast, the effective
    low-energy theory of the composite fermion liquid originally proposed by HLR lacks
    particle-hole symmetry and has vanishing Berry phase. In this paper, we explain
    how thermoelectric transport measurements can be used to test the Dirac nature
    of the composite fermions by quantitatively extracting this Berry phase. First,
    we point out that longitudinal thermopower (Seebeck effect) is nonvanishing because
    of the unusual nature of particle-hole symmetry in this context and is not sensitive
    to the Berry phase. In contrast, we find that off-diagonal thermopower (Nernst
    effect) is directly related to the topological structure of the composite Fermi
    surface, vanishing for zero Berry phase and taking its maximal value for π Berry
    phase. In contrast, in purely electrical transport signatures, the Berry phase
    contributions appear as small corrections to a large background signal, making
    the Nernst effect a promising diagnostic of the Dirac nature of composite fermions.
acknowledgement: We thank B. I. Halperin, N. Cooper, C. Wang, J. Alicea, and M. Zaletel
  for insightful conversations. A. C. P. and M. S. were supported by the Gordon and
  Betty Moore Foundation’s EPiQS Initiative through Grant No. GBMF4307. A. V. was
  supported by a Simons Investigator grant.
author:
- first_name: Andrew
  full_name: Potter, Andrew C
  last_name: Potter
- first_name: Maksym
  full_name: Maksym Serbyn
  id: 47809E7E-F248-11E8-B48F-1D18A9856A87
  last_name: Serbyn
  orcid: 0000-0002-2399-5827
- first_name: Ashvin
  full_name: Vishwanath, Ashvin K
  last_name: Vishwanath
citation:
  ama: Potter A, Serbyn M, Vishwanath A. Thermoelectric transport signatures of Dirac
    composite fermions in the half-filled Landau level. <i>Physical Review X</i>.
    2016;6(3). doi:<a href="https://doi.org/10.1103/PhysRevX.6.031026">10.1103/PhysRevX.6.031026</a>
  apa: Potter, A., Serbyn, M., &#38; Vishwanath, A. (2016). Thermoelectric transport
    signatures of Dirac composite fermions in the half-filled Landau level. <i>Physical
    Review X</i>. American Physical Society. <a href="https://doi.org/10.1103/PhysRevX.6.031026">https://doi.org/10.1103/PhysRevX.6.031026</a>
  chicago: Potter, Andrew, Maksym Serbyn, and Ashvin Vishwanath. “Thermoelectric Transport
    Signatures of Dirac Composite Fermions in the Half-Filled Landau Level.” <i>Physical
    Review X</i>. American Physical Society, 2016. <a href="https://doi.org/10.1103/PhysRevX.6.031026">https://doi.org/10.1103/PhysRevX.6.031026</a>.
  ieee: A. Potter, M. Serbyn, and A. Vishwanath, “Thermoelectric transport signatures
    of Dirac composite fermions in the half-filled Landau level,” <i>Physical Review
    X</i>, vol. 6, no. 3. American Physical Society, 2016.
  ista: Potter A, Serbyn M, Vishwanath A. 2016. Thermoelectric transport signatures
    of Dirac composite fermions in the half-filled Landau level. Physical Review X.
    6(3).
  mla: Potter, Andrew, et al. “Thermoelectric Transport Signatures of Dirac Composite
    Fermions in the Half-Filled Landau Level.” <i>Physical Review X</i>, vol. 6, no.
    3, American Physical Society, 2016, doi:<a href="https://doi.org/10.1103/PhysRevX.6.031026">10.1103/PhysRevX.6.031026</a>.
  short: A. Potter, M. Serbyn, A. Vishwanath, Physical Review X 6 (2016).
date_created: 2018-12-11T11:49:32Z
date_published: 2016-01-01T00:00:00Z
date_updated: 2021-01-12T08:22:25Z
day: '01'
doi: 10.1103/PhysRevX.6.031026
extern: 1
intvolume: '         6'
issue: '3'
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1512.06852
month: '01'
oa: 1
publication: Physical Review X
publication_status: published
publisher: American Physical Society
publist_id: '6417'
quality_controlled: 0
status: public
title: Thermoelectric transport signatures of Dirac composite fermions in the half-filled
  Landau level
type: journal_article
volume: 6
year: '2016'
...
---
_id: '984'
abstract:
- lang: eng
  text: The entanglement spectrum of the reduced density matrix contains information
    beyond the von Neumann entropy and provides unique insights into exotic orders
    or critical behavior of quantum systems. Here, we show that strongly disordered
    systems in the many-body localized phase have power-law entanglement spectra,
    arising from the presence of extensively many local integrals of motion. The power-law
    entanglement spectrum distinguishes many-body localized systems from ergodic systems,
    as well as from ground states of gapped integrable models or free systems in the
    vicinity of scale-invariant critical points. We confirm our results using large-scale
    exact diagonalization. In addition, we develop a matrix-product state algorithm
    which allows us to access the eigenstates of large systems close to the localization
    transition, and discuss general implications of our results for variational studies
    of highly excited eigenstates in many-body localized systems.
acknowledgement: We thank M. Stoudenmire and C. Turner for useful discussions. M.
  S. was supported by Gordon and Betty Moore Foundation's EPiQS Initiative through
  Grant No. GBMF4307. This research was supported in part by the National Science
  Foundation under Grant No. NSF PHY11-25915, and by the Swiss National Science Foundation
  and Alfred Sloan Foundation (D. A.). This work made use of the facilities of N8
  HPC Centre of Excellence, provided and funded by the N8 consortium and EPSRC (Grant
  No. EP/K000225/1). The Centre is coordinated by the Universities of Leeds and Manchester.
author:
- first_name: Maksym
  full_name: Maksym Serbyn
  id: 47809E7E-F248-11E8-B48F-1D18A9856A87
  last_name: Serbyn
  orcid: 0000-0002-2399-5827
- first_name: Alexios
  full_name: Alexios Michailidis
  id: 36EBAD38-F248-11E8-B48F-1D18A9856A87
  last_name: Michailidis
- first_name: Dmitry
  full_name: Abanin, Dmitry A
  last_name: Abanin
- first_name: Zlatko
  full_name: Papić, Zlatko
  last_name: Papić
citation:
  ama: Serbyn M, Michailidis A, Abanin D, Papić Z. Power-law entanglement spectrum
    in many-body localized phases. <i>Physical Review Letters</i>. 2016;117(16). doi:<a
    href="https://doi.org/10.1103/PhysRevLett.117.160601">10.1103/PhysRevLett.117.160601</a>
  apa: Serbyn, M., Michailidis, A., Abanin, D., &#38; Papić, Z. (2016). Power-law
    entanglement spectrum in many-body localized phases. <i>Physical Review Letters</i>.
    American Physical Society. <a href="https://doi.org/10.1103/PhysRevLett.117.160601">https://doi.org/10.1103/PhysRevLett.117.160601</a>
  chicago: Serbyn, Maksym, Alexios Michailidis, Dmitry Abanin, and Zlatko Papić. “Power-Law
    Entanglement Spectrum in Many-Body Localized Phases.” <i>Physical Review Letters</i>.
    American Physical Society, 2016. <a href="https://doi.org/10.1103/PhysRevLett.117.160601">https://doi.org/10.1103/PhysRevLett.117.160601</a>.
  ieee: M. Serbyn, A. Michailidis, D. Abanin, and Z. Papić, “Power-law entanglement
    spectrum in many-body localized phases,” <i>Physical Review Letters</i>, vol.
    117, no. 16. American Physical Society, 2016.
  ista: Serbyn M, Michailidis A, Abanin D, Papić Z. 2016. Power-law entanglement spectrum
    in many-body localized phases. Physical Review Letters. 117(16).
  mla: Serbyn, Maksym, et al. “Power-Law Entanglement Spectrum in Many-Body Localized
    Phases.” <i>Physical Review Letters</i>, vol. 117, no. 16, American Physical Society,
    2016, doi:<a href="https://doi.org/10.1103/PhysRevLett.117.160601">10.1103/PhysRevLett.117.160601</a>.
  short: M. Serbyn, A. Michailidis, D. Abanin, Z. Papić, Physical Review Letters 117
    (2016).
date_created: 2018-12-11T11:49:32Z
date_published: 2016-10-16T00:00:00Z
date_updated: 2021-01-12T08:22:25Z
day: '16'
doi: 10.1103/PhysRevLett.117.160601
extern: 1
intvolume: '       117'
issue: '16'
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1605.05737
month: '10'
oa: 1
publication: Physical Review Letters
publication_status: published
publisher: American Physical Society
publist_id: '6414'
quality_controlled: 0
status: public
title: Power-law entanglement spectrum in many-body localized phases
type: journal_article
volume: 117
year: '2016'
...
---
_id: '985'
abstract:
- lang: eng
  text: We report on magnetotransport studies of dual-gated, Bernal-stacked trilayer
    graphene (TLG) encapsulated in boron nitride crystals. We observe a quantum Hall
    effect staircase which indicates a complete lifting of the 12-fold degeneracy
    of the zeroth Landau level. As a function of perpendicular electric field, our
    data exhibit a sequence of phase transitions between all integer quantum Hall
    states in the filling factor interval -8&lt;ν&lt;0. We develop a theoretical model
    and argue that, in contrast to monolayer and bilayer graphene, the observed Landau
    level splittings and quantum Hall phase transitions can be understood within a
    single-particle picture, but imply the presence of a charge density imbalance
    between the inner and outer layers of TLG, even at charge neutrality and zero
    transverse electric field. Our results indicate the importance of a previously
    unaccounted band structure parameter which, together with a more accurate estimate
    of the other tight-binding parameters, results in a significantly improved determination
    of the electronic and Landau level structure of TLG.
acknowledgement: This work has been primarily supported by the National Science Foundation
  (DMR-1405221) for device fabrication and transport, and partly by ONR Young Investigator
  Award N00014-13-1-0610 for data analysis.
author:
- first_name: Leonardo
  full_name: Campos, Leonardo C
  last_name: Campos
- first_name: Thiti
  full_name: Taychatanapat, Thiti
  last_name: Taychatanapat
- first_name: Maksym
  full_name: Maksym Serbyn
  id: 47809E7E-F248-11E8-B48F-1D18A9856A87
  last_name: Serbyn
  orcid: 0000-0002-2399-5827
- first_name: Kawin
  full_name: Surakitbovorn, Kawin N
  last_name: Surakitbovorn
- first_name: Kenji
  full_name: Watanabe, Kenji
  last_name: Watanabe
- first_name: Takashi
  full_name: Taniguchi, Takashi
  last_name: Taniguchi
- first_name: Dmitry
  full_name: Abanin, Dmitry A
  last_name: Abanin
- first_name: Pablo
  full_name: Jarillo-Herrero, Pablo
  last_name: Jarillo Herrero
citation:
  ama: Campos L, Taychatanapat T, Serbyn M, et al. Landau Level Splittings, Phase
    Transitions, and Nonuniform Charge Distribution in Trilayer Graphene. <i>Physical
    Review Letters</i>. 2016;117(6). doi:<a href="https://doi.org/10.1103/PhysRevLett.117.066601">10.1103/PhysRevLett.117.066601</a>
  apa: Campos, L., Taychatanapat, T., Serbyn, M., Surakitbovorn, K., Watanabe, K.,
    Taniguchi, T., … Jarillo Herrero, P. (2016). Landau Level Splittings, Phase Transitions,
    and Nonuniform Charge Distribution in Trilayer Graphene. <i>Physical Review Letters</i>.
    American Physical Society. <a href="https://doi.org/10.1103/PhysRevLett.117.066601">https://doi.org/10.1103/PhysRevLett.117.066601</a>
  chicago: Campos, Leonardo, Thiti Taychatanapat, Maksym Serbyn, Kawin Surakitbovorn,
    Kenji Watanabe, Takashi Taniguchi, Dmitry Abanin, and Pablo Jarillo Herrero. “Landau
    Level Splittings, Phase Transitions, and Nonuniform Charge Distribution in Trilayer
    Graphene.” <i>Physical Review Letters</i>. American Physical Society, 2016. <a
    href="https://doi.org/10.1103/PhysRevLett.117.066601">https://doi.org/10.1103/PhysRevLett.117.066601</a>.
  ieee: L. Campos <i>et al.</i>, “Landau Level Splittings, Phase Transitions, and
    Nonuniform Charge Distribution in Trilayer Graphene,” <i>Physical Review Letters</i>,
    vol. 117, no. 6. American Physical Society, 2016.
  ista: Campos L, Taychatanapat T, Serbyn M, Surakitbovorn K, Watanabe K, Taniguchi
    T, Abanin D, Jarillo Herrero P. 2016. Landau Level Splittings, Phase Transitions,
    and Nonuniform Charge Distribution in Trilayer Graphene. Physical Review Letters.
    117(6).
  mla: Campos, Leonardo, et al. “Landau Level Splittings, Phase Transitions, and Nonuniform
    Charge Distribution in Trilayer Graphene.” <i>Physical Review Letters</i>, vol.
    117, no. 6, American Physical Society, 2016, doi:<a href="https://doi.org/10.1103/PhysRevLett.117.066601">10.1103/PhysRevLett.117.066601</a>.
  short: L. Campos, T. Taychatanapat, M. Serbyn, K. Surakitbovorn, K. Watanabe, T.
    Taniguchi, D. Abanin, P. Jarillo Herrero, Physical Review Letters 117 (2016).
date_created: 2018-12-11T11:49:33Z
date_published: 2016-04-01T00:00:00Z
date_updated: 2021-01-12T08:22:26Z
day: '01'
doi: 10.1103/PhysRevLett.117.066601
extern: 1
intvolume: '       117'
issue: '6'
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1607.00784
month: '04'
oa: 1
publication: Physical Review Letters
publication_status: published
publisher: American Physical Society
publist_id: '6415'
quality_controlled: 0
status: public
title: Landau Level Splittings, Phase Transitions, and Nonuniform Charge Distribution
  in Trilayer Graphene
type: journal_article
volume: 117
year: '2016'
...
---
_id: '986'
abstract:
- lang: eng
  text: The many-body localization transition (MBLT) between ergodic and many-body
    localized phases in disordered interacting systems is a subject of much recent
    interest. The statistics of eigenenergies is known to be a powerful probe of crossovers
    between ergodic and integrable systems in simpler examples of quantum chaos. We
    consider the evolution of the spectral statistics across the MBLT, starting with
    mapping to a Brownian motion process that analytically relates the spectral properties
    to the statistics of matrix elements. We demonstrate that the flow from Wigner-Dyson
    to Poisson statistics is a two-stage process. First, a fractal enhancement of
    matrix elements upon approaching the MBLT from the delocalized side produces an
    effective power-law interaction between energy levels, and leads to a plasma model
    for level statistics. At the second stage, the gas of eigenvalues has local interactions
    and the level statistics belongs to a semi-Poisson universality class. We verify
    our findings numerically on the XXZ spin chain. We provide a microscopic understanding
    of the level statistics across the MBLT and discuss implications for the transition
    that are strong constraints on possible theories.
author:
- first_name: Maksym
  full_name: Maksym Serbyn
  id: 47809E7E-F248-11E8-B48F-1D18A9856A87
  last_name: Serbyn
  orcid: 0000-0002-2399-5827
- first_name: Joel
  full_name: Moore, Joel E
  last_name: Moore
citation:
  ama: Serbyn M, Moore J. Spectral statistics across the many-body localization transition.
    <i>Physical Review B - Condensed Matter and Materials Physics</i>. 2016;93(4).
    doi:<a href="https://doi.org/10.1103/PhysRevB.93.041424">10.1103/PhysRevB.93.041424</a>
  apa: Serbyn, M., &#38; Moore, J. (2016). Spectral statistics across the many-body
    localization transition. <i>Physical Review B - Condensed Matter and Materials
    Physics</i>. American Physical Society. <a href="https://doi.org/10.1103/PhysRevB.93.041424">https://doi.org/10.1103/PhysRevB.93.041424</a>
  chicago: Serbyn, Maksym, and Joel Moore. “Spectral Statistics across the Many-Body
    Localization Transition.” <i>Physical Review B - Condensed Matter and Materials
    Physics</i>. American Physical Society, 2016. <a href="https://doi.org/10.1103/PhysRevB.93.041424">https://doi.org/10.1103/PhysRevB.93.041424</a>.
  ieee: M. Serbyn and J. Moore, “Spectral statistics across the many-body localization
    transition,” <i>Physical Review B - Condensed Matter and Materials Physics</i>,
    vol. 93, no. 4. American Physical Society, 2016.
  ista: Serbyn M, Moore J. 2016. Spectral statistics across the many-body localization
    transition. Physical Review B - Condensed Matter and Materials Physics. 93(4).
  mla: Serbyn, Maksym, and Joel Moore. “Spectral Statistics across the Many-Body Localization
    Transition.” <i>Physical Review B - Condensed Matter and Materials Physics</i>,
    vol. 93, no. 4, American Physical Society, 2016, doi:<a href="https://doi.org/10.1103/PhysRevB.93.041424">10.1103/PhysRevB.93.041424</a>.
  short: M. Serbyn, J. Moore, Physical Review B - Condensed Matter and Materials Physics
    93 (2016).
date_created: 2018-12-11T11:49:33Z
date_published: 2016-01-29T00:00:00Z
date_updated: 2021-01-12T08:22:26Z
day: '29'
doi: 10.1103/PhysRevB.93.041424
extern: 1
intvolume: '        93'
issue: '4'
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1508.07293
month: '01'
oa: 1
publication: Physical Review B - Condensed Matter and Materials Physics
publication_status: published
publisher: American Physical Society
publist_id: '6416'
quality_controlled: 0
status: public
title: Spectral statistics across the many-body localization transition
type: journal_article
volume: 93
year: '2016'
...
---
_id: '9864'
abstract:
- lang: eng
  text: Viral capsids are structurally constrained by interactions among the amino
    acids (AAs) of their constituent proteins. Therefore, epistasis is expected to
    evolve among physically interacting sites and to influence the rates of substitution.
    To study the evolution of epistasis, we focused on the major structural protein
    of the ϕX174 phage family by, first, reconstructing the ancestral protein sequences
    of 18 species using a Bayesian statistical framework. The inferred ancestral reconstruction
    differed at eight AAs, for a total of 256 possible ancestral haplotypes. For each
    ancestral haplotype and the extant species, we estimated, in silico, the distribution
    of free energies and epistasis of the capsid structure. We found that free energy
    has not significantly increased but epistasis has. We decomposed epistasis up
    to fifth order and found that higher-order epistasis sometimes compensates pairwise
    interactions making the free energy seem additive. The dN/dS ratio is low, suggesting
    strong purifying selection, and that structure is under stabilizing selection.
    We synthesized phages carrying ancestral haplotypes of the coat protein gene and
    measured their fitness experimentally. Our findings indicate that stabilizing
    mutations can have higher fitness, and that fitness optima do not necessarily
    coincide with energy minima.
article_processing_charge: No
author:
- first_name: Rodrigo A
  full_name: Fernandes Redondo, Rodrigo A
  id: 409D5C96-F248-11E8-B48F-1D18A9856A87
  last_name: Fernandes Redondo
  orcid: 0000-0002-5837-2793
- first_name: Harold
  full_name: de Vladar, Harold
  id: 2A181218-F248-11E8-B48F-1D18A9856A87
  last_name: de Vladar
  orcid: 0000-0002-5985-7653
- first_name: Tomasz
  full_name: Włodarski, Tomasz
  last_name: Włodarski
- first_name: Jonathan P
  full_name: Bollback, Jonathan P
  id: 2C6FA9CC-F248-11E8-B48F-1D18A9856A87
  last_name: Bollback
  orcid: 0000-0002-4624-4612
citation:
  ama: Fernandes Redondo RA, de Vladar H, Włodarski T, Bollback JP. Data from evolutionary
    interplay between structure, energy and epistasis in the coat protein of the ϕX174
    phage family. 2016. doi:<a href="https://doi.org/10.6084/m9.figshare.4315652.v1">10.6084/m9.figshare.4315652.v1</a>
  apa: Fernandes Redondo, R. A., de Vladar, H., Włodarski, T., &#38; Bollback, J.
    P. (2016). Data from evolutionary interplay between structure, energy and epistasis
    in the coat protein of the ϕX174 phage family. The Royal Society. <a href="https://doi.org/10.6084/m9.figshare.4315652.v1">https://doi.org/10.6084/m9.figshare.4315652.v1</a>
  chicago: Fernandes Redondo, Rodrigo A, Harold de Vladar, Tomasz Włodarski, and Jonathan
    P Bollback. “Data from Evolutionary Interplay between Structure, Energy and Epistasis
    in the Coat Protein of the ΦX174 Phage Family.” The Royal Society, 2016. <a href="https://doi.org/10.6084/m9.figshare.4315652.v1">https://doi.org/10.6084/m9.figshare.4315652.v1</a>.
  ieee: R. A. Fernandes Redondo, H. de Vladar, T. Włodarski, and J. P. Bollback, “Data
    from evolutionary interplay between structure, energy and epistasis in the coat
    protein of the ϕX174 phage family.” The Royal Society, 2016.
  ista: Fernandes Redondo RA, de Vladar H, Włodarski T, Bollback JP. 2016. Data from
    evolutionary interplay between structure, energy and epistasis in the coat protein
    of the ϕX174 phage family, The Royal Society, <a href="https://doi.org/10.6084/m9.figshare.4315652.v1">10.6084/m9.figshare.4315652.v1</a>.
  mla: Fernandes Redondo, Rodrigo A., et al. <i>Data from Evolutionary Interplay between
    Structure, Energy and Epistasis in the Coat Protein of the ΦX174 Phage Family</i>.
    The Royal Society, 2016, doi:<a href="https://doi.org/10.6084/m9.figshare.4315652.v1">10.6084/m9.figshare.4315652.v1</a>.
  short: R.A. Fernandes Redondo, H. de Vladar, T. Włodarski, J.P. Bollback, (2016).
date_created: 2021-08-10T08:29:47Z
date_published: 2016-12-14T00:00:00Z
date_updated: 2025-05-28T11:57:06Z
day: '14'
department:
- _id: NiBa
- _id: JoBo
doi: 10.6084/m9.figshare.4315652.v1
main_file_link:
- open_access: '1'
  url: https://doi.org/10.6084/m9.figshare.4315652.v1
month: '12'
oa: 1
oa_version: Published Version
publisher: The Royal Society
related_material:
  record:
  - id: '1077'
    relation: used_in_publication
    status: public
status: public
title: Data from evolutionary interplay between structure, energy and epistasis in
  the coat protein of the ϕX174 phage family
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2016'
...
---
_id: '987'
abstract:
- lang: eng
  text: In contrast to bulk FeSe, which exhibits nematic order and low temperature
    superconductivity, highly doped FeSe reverses the situation, having high temperature
    superconductivity appearing alongside a suppression of nematic order. To investigate
    this phenomenon, we study a minimal electronic model of FeSe, with interactions
    that enhance nematic fluctuations. This model is sign problem free, and is simulated
    using determinant quantum Monte Carlo (DQMC). We developed a DQMC algorithm with
    parallel tempering, which proves to be an efficient source of global updates and
    allows us to access the region of strong interactions. Over a wide range of intermediate
    couplings, we observe superconductivity with an extended s-wave order parameter,
    along with enhanced, but short-ranged, q=(0,0) ferro-orbital (nematic) order.
    These results are consistent with approximate weak-coupling treatments that predict
    that nematic fluctuations lead to superconducting pairing. Surprisingly, in the
    parameter range under study, we do not observe nematic long-range order. Instead,
    at stronger coupling an unusual insulating phase with q=(π,π) antiferro-orbital
    order appears, which is missed by weak-coupling approximations.
acknowledgement: We thank S. Gazit for numerous discussions. This research was supported
  by the Gordon and Betty Moore Foundation EPiQS Initiative through Grant No. GBMF4307
  (M.S.), the U.S. Department of Energy, Office of Science, Office of Basic Energy
  Sciences under Grant No. DE-SC0014671 (R.T.S.), and a Simons Investigator grant
  (A.V.).
author:
- first_name: Philipp
  full_name: Dumitrescu, Philipp T
  last_name: Dumitrescu
- first_name: Maksym
  full_name: Maksym Serbyn
  id: 47809E7E-F248-11E8-B48F-1D18A9856A87
  last_name: Serbyn
  orcid: 0000-0002-2399-5827
- first_name: Richard
  full_name: Scalettar, Richard T
  last_name: Scalettar
- first_name: Ashvin
  full_name: Vishwanath, Ashvin K
  last_name: Vishwanath
citation:
  ama: 'Dumitrescu P, Serbyn M, Scalettar R, Vishwanath A. Superconductivity and nematic
    fluctuations in a model of doped FeSe monolayers: Determinant quantum Monte Carlo
    study. <i>Physical Review B - Condensed Matter and Materials Physics</i>. 2016;94(15).
    doi:<a href="https://doi.org/10.1103/PhysRevB.94.155127">10.1103/PhysRevB.94.155127</a>'
  apa: 'Dumitrescu, P., Serbyn, M., Scalettar, R., &#38; Vishwanath, A. (2016). Superconductivity
    and nematic fluctuations in a model of doped FeSe monolayers: Determinant quantum
    Monte Carlo study. <i>Physical Review B - Condensed Matter and Materials Physics</i>.
    American Physical Society. <a href="https://doi.org/10.1103/PhysRevB.94.155127">https://doi.org/10.1103/PhysRevB.94.155127</a>'
  chicago: 'Dumitrescu, Philipp, Maksym Serbyn, Richard Scalettar, and Ashvin Vishwanath.
    “Superconductivity and Nematic Fluctuations in a Model of Doped FeSe Monolayers:
    Determinant Quantum Monte Carlo Study.” <i>Physical Review B - Condensed Matter
    and Materials Physics</i>. American Physical Society, 2016. <a href="https://doi.org/10.1103/PhysRevB.94.155127">https://doi.org/10.1103/PhysRevB.94.155127</a>.'
  ieee: 'P. Dumitrescu, M. Serbyn, R. Scalettar, and A. Vishwanath, “Superconductivity
    and nematic fluctuations in a model of doped FeSe monolayers: Determinant quantum
    Monte Carlo study,” <i>Physical Review B - Condensed Matter and Materials Physics</i>,
    vol. 94, no. 15. American Physical Society, 2016.'
  ista: 'Dumitrescu P, Serbyn M, Scalettar R, Vishwanath A. 2016. Superconductivity
    and nematic fluctuations in a model of doped FeSe monolayers: Determinant quantum
    Monte Carlo study. Physical Review B - Condensed Matter and Materials Physics.
    94(15).'
  mla: 'Dumitrescu, Philipp, et al. “Superconductivity and Nematic Fluctuations in
    a Model of Doped FeSe Monolayers: Determinant Quantum Monte Carlo Study.” <i>Physical
    Review B - Condensed Matter and Materials Physics</i>, vol. 94, no. 15, American
    Physical Society, 2016, doi:<a href="https://doi.org/10.1103/PhysRevB.94.155127">10.1103/PhysRevB.94.155127</a>.'
  short: P. Dumitrescu, M. Serbyn, R. Scalettar, A. Vishwanath, Physical Review B
    - Condensed Matter and Materials Physics 94 (2016).
date_created: 2018-12-11T11:49:33Z
date_published: 2016-10-17T00:00:00Z
date_updated: 2021-01-12T08:22:27Z
day: '17'
doi: 10.1103/PhysRevB.94.155127
extern: 1
intvolume: '        94'
issue: '15'
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1512.08523
month: '10'
oa: 1
publication: Physical Review B - Condensed Matter and Materials Physics
publication_status: published
publisher: American Physical Society
publist_id: '6413'
quality_controlled: 0
status: public
title: 'Superconductivity and nematic fluctuations in a model of doped FeSe monolayers:
  Determinant quantum Monte Carlo study'
type: journal_article
volume: 94
year: '2016'
...
---
_id: '366'
abstract:
- lang: eng
  text: Cesium lead halide (CsPbX3, X = Cl, Br, I) nanocrystals (NCs) offer exceptional
    optical properties for several potential applications but their implementation
    is hindered by a low chemical and structural stability and limited processability.
    In the present work, we developed a new method to efficiently coat CsPbX3 NCs,
    which resulted in their increased chemical and optical stability as well as processability.
    The method is based on the incorporation of poly(maleic anhydride-alt-1-octadecene)
    (PMA) into the synthesis of the perovskite NCs. The presence of PMA in the ligand
    shell stabilizes the NCs by tightening the ligand binding, limiting in this way
    the NC surface interaction with the surrounding media. We further show that these
    NCs can be embedded in self-standing silicone/glass plates as down-conversion
    filters for the fabrication of monochromatic green and white light emitting diodes
    (LEDs) with narrow bandwidths and appealing color characteristics.
acknowledgement: This work was supported by the European Regional Development Funds,
  the Framework 7 program under project UNION (FP7-NMP-2012-310250) and HI-LED (FP7-ICT-2013-11-
  619912), as well as the Spanish MINECO Projects BOOSTER (ENE2013-46624-C4-3-R) and
  AMALIE (TEC2012-38901- C02-01). M.M. thanks the Spanish MINECO for financial support
  through the Juan de la Cierva-formacion program. A.G. and J.A. acknowledge funding
  from Generalitat de Catalunya 2014 SGR 1638 and the Spanish MINECO MAT2014-51480-
  ERC (e-ATOM) and Severo Ochoa Excellence Program. We would like to thank Pablo Guardia
  for fruitful discussions.
author:
- first_name: Michaela
  full_name: Meyn, Michaela
  last_name: Meyn
- first_name: Mariano
  full_name: Perálvarez, Mariano
  last_name: Perálvarez
- first_name: Amelie
  full_name: Heuer Jungemann, Amelie
  last_name: Heuer Jungemann
- first_name: Wim
  full_name: Hertog, Wim
  last_name: Hertog
- first_name: Maria
  full_name: Ibanez Sabate, Maria
  id: 43C61214-F248-11E8-B48F-1D18A9856A87
  last_name: Ibanez Sabate
  orcid: 0000-0001-5013-2843
- first_name: Raquel
  full_name: Nafria, Raquel
  last_name: Nafria
- first_name: Aziz
  full_name: Genç, Aziz
  last_name: Genç
- first_name: Jordi
  full_name: Arbiol, Jordi
  last_name: Arbiol
- first_name: Maksym
  full_name: Kovalenko, Maksym
  last_name: Kovalenko
- first_name: Josep
  full_name: Carreras, Josep
  last_name: Carreras
- first_name: Andreu
  full_name: Cabot, Andreu
  last_name: Cabot
- first_name: Antonios
  full_name: Kanaras, Antonios
  last_name: Kanaras
citation:
  ama: Meyn M, Perálvarez M, Heuer Jungemann A, et al. Polymer enhanced stability
    of inorganic perovskite nanocrystals and their application in color conversion
    LEDs. <i>ACS Applied Materials and Interfaces</i>. 2016;8(30):19579-19586. doi:<a
    href="https://doi.org/10.1021/acsami.6b02529">10.1021/acsami.6b02529</a>
  apa: Meyn, M., Perálvarez, M., Heuer Jungemann, A., Hertog, W., Ibáñez, M., Nafria,
    R., … Kanaras, A. (2016). Polymer enhanced stability of inorganic perovskite nanocrystals
    and their application in color conversion LEDs. <i>ACS Applied Materials and Interfaces</i>.
    American Chemical Society. <a href="https://doi.org/10.1021/acsami.6b02529">https://doi.org/10.1021/acsami.6b02529</a>
  chicago: Meyn, Michaela, Mariano Perálvarez, Amelie Heuer Jungemann, Wim Hertog,
    Maria Ibáñez, Raquel Nafria, Aziz Genç, et al. “Polymer Enhanced Stability of
    Inorganic Perovskite Nanocrystals and Their Application in Color Conversion LEDs.”
    <i>ACS Applied Materials and Interfaces</i>. American Chemical Society, 2016.
    <a href="https://doi.org/10.1021/acsami.6b02529">https://doi.org/10.1021/acsami.6b02529</a>.
  ieee: M. Meyn <i>et al.</i>, “Polymer enhanced stability of inorganic perovskite
    nanocrystals and their application in color conversion LEDs,” <i>ACS Applied Materials
    and Interfaces</i>, vol. 8, no. 30. American Chemical Society, pp. 19579–19586,
    2016.
  ista: Meyn M, Perálvarez M, Heuer Jungemann A, Hertog W, Ibáñez M, Nafria R, Genç
    A, Arbiol J, Kovalenko M, Carreras J, Cabot A, Kanaras A. 2016. Polymer enhanced
    stability of inorganic perovskite nanocrystals and their application in color
    conversion LEDs. ACS Applied Materials and Interfaces. 8(30), 19579–19586.
  mla: Meyn, Michaela, et al. “Polymer Enhanced Stability of Inorganic Perovskite
    Nanocrystals and Their Application in Color Conversion LEDs.” <i>ACS Applied Materials
    and Interfaces</i>, vol. 8, no. 30, American Chemical Society, 2016, pp. 19579–86,
    doi:<a href="https://doi.org/10.1021/acsami.6b02529">10.1021/acsami.6b02529</a>.
  short: M. Meyn, M. Perálvarez, A. Heuer Jungemann, W. Hertog, M. Ibáñez, R. Nafria,
    A. Genç, J. Arbiol, M. Kovalenko, J. Carreras, A. Cabot, A. Kanaras, ACS Applied
    Materials and Interfaces 8 (2016) 19579–19586.
date_created: 2018-12-11T11:46:03Z
date_published: 2016-07-25T00:00:00Z
date_updated: 2021-01-12T07:44:58Z
day: '25'
doi: 10.1021/acsami.6b02529
extern: '1'
intvolume: '         8'
issue: '30'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://eprints.soton.ac.uk/398581/
month: '07'
oa: 1
oa_version: None
page: 19579 - 19586
publication: ACS Applied Materials and Interfaces
publication_status: published
publisher: American Chemical Society
publist_id: '7460'
status: public
title: Polymer enhanced stability of inorganic perovskite nanocrystals and their application
  in color conversion LEDs
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8
year: '2016'
...
---
_id: '389'
abstract:
- lang: eng
  text: The coherent optical manipulation of solids is emerging as a promising way
    to engineer novel quantum states of matter. The strong time-periodic potential
    of intense laser light can be used to generate hybrid photon-electron states.
    Interaction of light with Bloch states leads to Floquet-Bloch states, which are
    essential in realizing new photo-induced quantum phases. Similarly, dressing of
    free-electron states near the surface of a solid generates Volkov states, which
    are used to study nonlinear optics in atoms and semiconductors. The interaction
    of these two dynamic states with each other remains an open experimental problem.
    Here we use time- and angle-resolved photoemission spectroscopy (Tr-ARPES) to
    selectively study the transition between these two states on the surface of the
    topological insulator Bi2Se3. We find that the coupling between the two strongly
    depends on the electron momentum, providing a route to enhance or inhibit it.
    Moreover, by controlling the light polarization we can negate Volkov states to
    generate pure Floquet-Bloch states. This work establishes a systematic path for
    the coherent manipulation of solids via light-matter interaction.
acknowledgement: The authors would like to thank C. Lee for useful discussions. This
  work is supported by US Department of Energy (DOE), Basic Energy Sciences, Division
  of Materials Sciences and Engineering (experimental set-up, data acquisition and
  theory), Army Research Office (electron spectrometer) and by the Gordon and Betty
  Moore Foundation’s EPiQS Initiative through Grant GBMF4540 (data analysis).
author:
- first_name: Fahad
  full_name: Mahmood, Fahad
  last_name: Mahmood
- first_name: Ching
  full_name: Chan, Ching
  last_name: Chan
- first_name: Zhanybek
  full_name: Alpichshev, Zhanybek
  id: 45E67A2A-F248-11E8-B48F-1D18A9856A87
  last_name: Alpichshev
  orcid: 0000-0002-7183-5203
- first_name: Dillon
  full_name: Gardner, Dillon
  last_name: Gardner
- first_name: Young
  full_name: Lee, Young
  last_name: Lee
- first_name: Patrick
  full_name: Lee, Patrick
  last_name: Lee
- first_name: Nuh
  full_name: Gedik, Nuh
  last_name: Gedik
citation:
  ama: Mahmood F, Chan C, Alpichshev Z, et al. Selective scattering between Floquet
    Bloch and Volkov states in a topological insulator. <i>Nature Physics</i>. 2016;12(4):306-310.
    doi:<a href="https://doi.org/10.1038/nphys3609">10.1038/nphys3609</a>
  apa: Mahmood, F., Chan, C., Alpichshev, Z., Gardner, D., Lee, Y., Lee, P., &#38;
    Gedik, N. (2016). Selective scattering between Floquet Bloch and Volkov states
    in a topological insulator. <i>Nature Physics</i>. Nature Publishing Group. <a
    href="https://doi.org/10.1038/nphys3609">https://doi.org/10.1038/nphys3609</a>
  chicago: Mahmood, Fahad, Ching Chan, Zhanybek Alpichshev, Dillon Gardner, Young
    Lee, Patrick Lee, and Nuh Gedik. “Selective Scattering between Floquet Bloch and
    Volkov States in a Topological Insulator.” <i>Nature Physics</i>. Nature Publishing
    Group, 2016. <a href="https://doi.org/10.1038/nphys3609">https://doi.org/10.1038/nphys3609</a>.
  ieee: F. Mahmood <i>et al.</i>, “Selective scattering between Floquet Bloch and
    Volkov states in a topological insulator,” <i>Nature Physics</i>, vol. 12, no.
    4. Nature Publishing Group, pp. 306–310, 2016.
  ista: Mahmood F, Chan C, Alpichshev Z, Gardner D, Lee Y, Lee P, Gedik N. 2016. Selective
    scattering between Floquet Bloch and Volkov states in a topological insulator.
    Nature Physics. 12(4), 306–310.
  mla: Mahmood, Fahad, et al. “Selective Scattering between Floquet Bloch and Volkov
    States in a Topological Insulator.” <i>Nature Physics</i>, vol. 12, no. 4, Nature
    Publishing Group, 2016, pp. 306–10, doi:<a href="https://doi.org/10.1038/nphys3609">10.1038/nphys3609</a>.
  short: F. Mahmood, C. Chan, Z. Alpichshev, D. Gardner, Y. Lee, P. Lee, N. Gedik,
    Nature Physics 12 (2016) 306–310.
date_created: 2018-12-11T11:46:11Z
date_published: 2016-04-01T00:00:00Z
date_updated: 2021-01-12T07:52:59Z
day: '01'
doi: 10.1038/nphys3609
extern: '1'
intvolume: '        12'
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1512.05714
month: '04'
oa: 1
oa_version: None
page: 306 - 310
publication: Nature Physics
publication_status: published
publisher: Nature Publishing Group
publist_id: '7440'
status: public
title: Selective scattering between Floquet Bloch and Volkov states in a topological
  insulator
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 12
year: '2016'
...
---
_id: '460'
abstract:
- lang: eng
  text: NF-κB signaling is a central pathway of immunity and integrates signal transduction
    upon a wide array of inflammatory stimuli. Noncanonical NF-κB signaling is activated
    by a small subset of TNF family receptors and characterized by NF-κB2/p52 transcriptional
    activity. The medical relevance of this pathway has recently re-emerged from the
    discovery of primary immunodeficiency patients that have loss-of-function mutations
    in the MAP3K14 gene encoding NIK. Nevertheless, knowledge of protein interactions
    that regulate noncanonical NF-κB signaling is sparse. Here we report a detailed
    state-of-the-art mass spectrometry-based protein–protein interaction network including
    the noncanonical NF-κB signaling nodes TRAF2, TRAF3, IKKα, NIK, and NF-κB2/p100.
    The value of the data set was confirmed by the identification of interactions
    already known to regulate this pathway. In addition, a remarkable number of novel
    interactors were identified. We provide validation of the novel NIK and IKKα interactor
    FKBP8, which may regulate processes downstream of noncanonical NF-κB signaling.
    To understand perturbed noncanonical NF-κB signaling in the context of misregulated
    NIK in disease, we also provide a differential interactome of NIK mutants that
    cause immunodeficiency. Altogether, this data set not only provides critical insight
    into how protein–protein interactions can regulate immune signaling but also offers
    a novel resource on noncanonical NF-κB signaling.
acknowledgement: "Austrian Science Fund (FWF) Lise Meitner Program Fellowship (FWF
  M-1809, to K.L.W.),  FWF Infect-ERA framework (I-1620_B22, to S.K.), European Research
  Council (ERC StG 310857, to K.B.)\nWe thank Jacques Colinge, André C. Müller, and
  Peter Májek for fruitful discussions and Elisabeth Salzer and Kate G. Ackermann
  for critically reading the manuscript. We thank Giulio Superti-Furga for providing
  pTO-SII-HA-GW plasmids. \n\n"
author:
- first_name: Katharina
  full_name: Willmann, Katharina L
  last_name: Willmann
- first_name: Roberto
  full_name: Roberto Sacco
  id: 42C9F57E-F248-11E8-B48F-1D18A9856A87
  last_name: Sacco
- first_name: Rui
  full_name: Martins, Rui
  last_name: Martins
- first_name: Wojciech
  full_name: Garncarz, Wojciech
  last_name: Garncarz
- first_name: Ana
  full_name: Krolo, Ana
  last_name: Krolo
- first_name: Sylvia
  full_name: Knapp, Sylvia
  last_name: Knapp
- first_name: Keiryn
  full_name: Bennett, Keiryn L
  last_name: Bennett
- first_name: Kaan
  full_name: Boztug, Kaan
  last_name: Boztug
citation:
  ama: Willmann K, Sacco R, Martins R, et al. Expanding the interactome of the noncanonical
    NF-κB signaling pathway. <i>Journal of Proteome Research</i>. 2016;15(9):2900-2909.
    doi:<a href="https://doi.org/10.1021/acs.jproteome.5b01004">10.1021/acs.jproteome.5b01004</a>
  apa: Willmann, K., Sacco, R., Martins, R., Garncarz, W., Krolo, A., Knapp, S., …
    Boztug, K. (2016). Expanding the interactome of the noncanonical NF-κB signaling
    pathway. <i>Journal of Proteome Research</i>. American Chemical Society. <a href="https://doi.org/10.1021/acs.jproteome.5b01004">https://doi.org/10.1021/acs.jproteome.5b01004</a>
  chicago: Willmann, Katharina, Roberto Sacco, Rui Martins, Wojciech Garncarz, Ana
    Krolo, Sylvia Knapp, Keiryn Bennett, and Kaan Boztug. “Expanding the Interactome
    of the Noncanonical NF-ΚB Signaling Pathway.” <i>Journal of Proteome Research</i>.
    American Chemical Society, 2016. <a href="https://doi.org/10.1021/acs.jproteome.5b01004">https://doi.org/10.1021/acs.jproteome.5b01004</a>.
  ieee: K. Willmann <i>et al.</i>, “Expanding the interactome of the noncanonical
    NF-κB signaling pathway,” <i>Journal of Proteome Research</i>, vol. 15, no. 9.
    American Chemical Society, pp. 2900–2909, 2016.
  ista: Willmann K, Sacco R, Martins R, Garncarz W, Krolo A, Knapp S, Bennett K, Boztug
    K. 2016. Expanding the interactome of the noncanonical NF-κB signaling pathway.
    Journal of Proteome Research. 15(9), 2900–2909.
  mla: Willmann, Katharina, et al. “Expanding the Interactome of the Noncanonical
    NF-ΚB Signaling Pathway.” <i>Journal of Proteome Research</i>, vol. 15, no. 9,
    American Chemical Society, 2016, pp. 2900–09, doi:<a href="https://doi.org/10.1021/acs.jproteome.5b01004">10.1021/acs.jproteome.5b01004</a>.
  short: K. Willmann, R. Sacco, R. Martins, W. Garncarz, A. Krolo, S. Knapp, K. Bennett,
    K. Boztug, Journal of Proteome Research 15 (2016) 2900–2909.
date_created: 2018-12-11T11:46:36Z
date_published: 2016-07-15T00:00:00Z
date_updated: 2021-01-12T08:00:24Z
day: '15'
doi: 10.1021/acs.jproteome.5b01004
extern: 1
intvolume: '        15'
issue: '9'
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5295629/
month: '07'
oa: 1
page: 2900 - 2909
publication: Journal of Proteome Research
publication_status: published
publisher: American Chemical Society
publist_id: '7361'
quality_controlled: 0
status: public
title: Expanding the interactome of the noncanonical NF-κB signaling pathway
type: journal_article
volume: 15
year: '2016'
...
---
_id: '478'
abstract:
- lang: eng
  text: 'Magic: the Gathering is a game about magical combat for any number of players.
    Formally it is a zero-sum, imperfect information stochastic game that consists
    of a potentially unbounded number of steps. We consider the problem of deciding
    if a move is legal in a given single step of Magic. We show that the problem is
    (a) coNP-complete in general; and (b) in P if either of two small sets of cards
    are not used. Our lower bound holds even for single-player Magic games. The significant
    aspects of our results are as follows: First, in most real-life game problems,
    the task of deciding whether a given move is legal in a single step is trivial,
    and the computationally hard task is to find the best sequence of legal moves
    in the presence of multiple players. In contrast, quite uniquely our hardness
    result holds for single step and with only one-player. Second, we establish efficient
    algorithms for important special cases of Magic.'
alternative_title:
- Frontiers in Artificial Intelligence and Applications
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Rasmus
  full_name: Ibsen-Jensen, Rasmus
  id: 3B699956-F248-11E8-B48F-1D18A9856A87
  last_name: Ibsen-Jensen
  orcid: 0000-0003-4783-0389
citation:
  ama: 'Chatterjee K, Ibsen-Jensen R. The complexity of deciding legality of a single
    step of magic: The gathering. In: Vol 285. IOS Press; 2016:1432-1439. doi:<a href="https://doi.org/10.3233/978-1-61499-672-9-1432">10.3233/978-1-61499-672-9-1432</a>'
  apa: 'Chatterjee, K., &#38; Ibsen-Jensen, R. (2016). The complexity of deciding
    legality of a single step of magic: The gathering (Vol. 285, pp. 1432–1439). Presented
    at the ECAI: European Conference on Artificial Intelligence, The Hague, Netherlands:
    IOS Press. <a href="https://doi.org/10.3233/978-1-61499-672-9-1432">https://doi.org/10.3233/978-1-61499-672-9-1432</a>'
  chicago: 'Chatterjee, Krishnendu, and Rasmus Ibsen-Jensen. “The Complexity of Deciding
    Legality of a Single Step of Magic: The Gathering,” 285:1432–39. IOS Press, 2016.
    <a href="https://doi.org/10.3233/978-1-61499-672-9-1432">https://doi.org/10.3233/978-1-61499-672-9-1432</a>.'
  ieee: 'K. Chatterjee and R. Ibsen-Jensen, “The complexity of deciding legality of
    a single step of magic: The gathering,” presented at the ECAI: European Conference
    on Artificial Intelligence, The Hague, Netherlands, 2016, vol. 285, pp. 1432–1439.'
  ista: 'Chatterjee K, Ibsen-Jensen R. 2016. The complexity of deciding legality of
    a single step of magic: The gathering. ECAI: European Conference on Artificial
    Intelligence, Frontiers in Artificial Intelligence and Applications, vol. 285,
    1432–1439.'
  mla: 'Chatterjee, Krishnendu, and Rasmus Ibsen-Jensen. <i>The Complexity of Deciding
    Legality of a Single Step of Magic: The Gathering</i>. Vol. 285, IOS Press, 2016,
    pp. 1432–39, doi:<a href="https://doi.org/10.3233/978-1-61499-672-9-1432">10.3233/978-1-61499-672-9-1432</a>.'
  short: K. Chatterjee, R. Ibsen-Jensen, in:, IOS Press, 2016, pp. 1432–1439.
conference:
  end_date: 2016-09-02
  location: The Hague, Netherlands
  name: 'ECAI: European Conference on Artificial Intelligence'
  start_date: 2016-08-29
date_created: 2018-12-11T11:46:41Z
date_published: 2016-01-01T00:00:00Z
date_updated: 2021-01-12T08:00:54Z
day: '01'
ddc:
- '004'
department:
- _id: KrCh
doi: 10.3233/978-1-61499-672-9-1432
file:
- access_level: open_access
  checksum: 848043c812ace05e459579c923f3d3cf
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:07:59Z
  date_updated: 2020-07-14T12:46:35Z
  file_id: '4658'
  file_name: IST-2018-950-v1+1_2016_Chatterjee_The_complexity.pdf
  file_size: 2116225
  relation: main_file
file_date_updated: 2020-07-14T12:46:35Z
has_accepted_license: '1'
intvolume: '       285'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc/4.0/
month: '01'
oa: 1
oa_version: Published Version
page: 1432 - 1439
publication_status: published
publisher: IOS Press
publist_id: '7342'
pubrep_id: '950'
quality_controlled: '1'
scopus_import: 1
status: public
title: 'The complexity of deciding legality of a single step of magic: The gathering'
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
  short: CC BY-NC (4.0)
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 285
year: '2016'
...
---
_id: '480'
abstract:
- lang: eng
  text: Graph games provide the foundation for modeling and synthesizing reactive
    processes. In the synthesis of stochastic reactive processes, the traditional
    model is perfect-information stochastic games, where some transitions of the game
    graph are controlled by two adversarial players, and the other transitions are
    executed probabilistically. We consider such games where the objective is the
    conjunction of several quantitative objectives (specified as mean-payoff conditions),
    which we refer to as generalized mean-payoff objectives. The basic decision problem
    asks for the existence of a finite-memory strategy for a player that ensures the
    generalized mean-payoff objective be satisfied with a desired probability against
    all strategies of the opponent. A special case of the decision problem is the
    almost-sure problem where the desired probability is 1. Previous results presented
    a semi-decision procedure for -approximations of the almost-sure problem. In this
    work, we show that both the almost-sure problem as well as the general basic decision
    problem are coNP-complete, significantly improving the previous results. Moreover,
    we show that in the case of 1-player stochastic games, randomized memoryless strategies
    are sufficient and the problem can be solved in polynomial time. In contrast,
    in two-player stochastic games, we show that even with randomized strategies exponential
    memory is required in general, and present a matching exponential upper bound.
    We also study the basic decision problem with infinite-memory strategies and present
    computational complexity results for the problem. Our results are relevant in
    the synthesis of stochastic reactive systems with multiple quantitative requirements.
alternative_title:
- Proceedings Symposium on Logic in Computer Science
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Laurent
  full_name: Doyen, Laurent
  last_name: Doyen
citation:
  ama: 'Chatterjee K, Doyen L. Perfect-information stochastic games with generalized
    mean-payoff objectives. In: Vol 05-08-July-2016. IEEE; 2016:247-256. doi:<a href="https://doi.org/10.1145/2933575.2934513">10.1145/2933575.2934513</a>'
  apa: 'Chatterjee, K., &#38; Doyen, L. (2016). Perfect-information stochastic games
    with generalized mean-payoff objectives (Vol. 05-08-July-2016, pp. 247–256). Presented
    at the LICS: Logic in Computer Science, New York, NY, USA: IEEE. <a href="https://doi.org/10.1145/2933575.2934513">https://doi.org/10.1145/2933575.2934513</a>'
  chicago: Chatterjee, Krishnendu, and Laurent Doyen. “Perfect-Information Stochastic
    Games with Generalized Mean-Payoff Objectives,” 05-08-July-2016:247–56. IEEE,
    2016. <a href="https://doi.org/10.1145/2933575.2934513">https://doi.org/10.1145/2933575.2934513</a>.
  ieee: 'K. Chatterjee and L. Doyen, “Perfect-information stochastic games with generalized
    mean-payoff objectives,” presented at the LICS: Logic in Computer Science, New
    York, NY, USA, 2016, vol. 05-08-July-2016, pp. 247–256.'
  ista: 'Chatterjee K, Doyen L. 2016. Perfect-information stochastic games with generalized
    mean-payoff objectives. LICS: Logic in Computer Science, Proceedings Symposium
    on Logic in Computer Science, vol. 05-08-July-2016, 247–256.'
  mla: Chatterjee, Krishnendu, and Laurent Doyen. <i>Perfect-Information Stochastic
    Games with Generalized Mean-Payoff Objectives</i>. Vol. 05-08-July-2016, IEEE,
    2016, pp. 247–56, doi:<a href="https://doi.org/10.1145/2933575.2934513">10.1145/2933575.2934513</a>.
  short: K. Chatterjee, L. Doyen, in:, IEEE, 2016, pp. 247–256.
conference:
  end_date: 2016-07-08
  location: New York, NY, USA
  name: 'LICS: Logic in Computer Science'
  start_date: 2016-07-05
date_created: 2018-12-11T11:46:42Z
date_published: 2016-07-05T00:00:00Z
date_updated: 2021-01-12T08:00:56Z
day: '05'
department:
- _id: KrCh
doi: 10.1145/2933575.2934513
ec_funded: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1604.06376
month: '07'
oa: 1
oa_version: Preprint
page: 247 - 256
project:
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S 11407_N23
  name: Rigorous Systems Engineering
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
- _id: 25892FC0-B435-11E9-9278-68D0E5697425
  grant_number: ICT15-003
  name: Efficient Algorithms for Computer Aided Verification
publication_status: published
publisher: IEEE
publist_id: '7340'
quality_controlled: '1'
scopus_import: 1
status: public
title: Perfect-information stochastic games with generalized mean-payoff objectives
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 05-08-July-2016
year: '2016'
...
---
_id: '510'
abstract:
- lang: eng
  text: 'The CLE (CLAVATA3/Embryo Surrounding Region-related) peptides are small secreted
    signaling peptides that are primarily involved in the regulation of stem cell
    homeostasis in different plant meristems. Particularly, the characterization of
    the CLE41-PXY/TDR signaling pathway has greatly advanced our understanding on
    the potential roles of CLE peptides in vascular development and wood formation.
    Nevertheless, our knowledge on this gene family in a tree species is limited.
    In a recent study, we reported on a systematically investigation of the CLE gene
    family in Populus trichocarpa . The potential roles of PtCLE genes were studied
    by comparative analysis and transcriptional pro fi ling. Among fi fty PtCLE members,
    many PtCLE proteins share identical CLE motifs or contain the same CLE motif as
    that of AtCLEs, while PtCLE genes exhibited either comparable or distinct expression
    patterns comparing to their Arabidopsis counterparts. These fi ndings indicate
    the existence of both functional conservation and functional divergence between
    PtCLEs and their AtCLE orthologues. Our results provide valuable resources for
    future functional investigations of these critical signaling molecules in woody
    plants. '
acknowledgement: 'We are grateful to Dr. Long (Laboratoire de Reproduction et Developpement
  des Plantes,CNRS,INRA,ENSLyon,UCBL,Universite de Lyon,France)for critical reading
  of the article. Work in our group is supported by the National Natural Science Foundation
  of China (31271575; 31200902), the Fundamental Research Funds for the Central Univ
  ersities (GK201103005), the Specialized Research Fund for the Doctoral Program of
  Higher Education from the Ministry of Education of China (20120202120009), the Scientific
  Research Foundation for the Returned Overseas Chinese Scholars, State Education
  Ministry, and the Natural Science Basic Research Plan in Shaanxi Province of China
  (2014JM3064). '
article_number: e1191734
article_processing_charge: No
author:
- first_name: Zhijun
  full_name: Liu, Zhijun
  last_name: Liu
- first_name: 'Nan'
  full_name: Yang, Nan
  last_name: Yang
- first_name: Yanting
  full_name: Lv, Yanting
  last_name: Lv
- first_name: Lixia
  full_name: Pan, Lixia
  last_name: Pan
- first_name: Shuo
  full_name: Lv, Shuo
  last_name: Lv
- first_name: Huibin
  full_name: Han, Huibin
  id: 31435098-F248-11E8-B48F-1D18A9856A87
  last_name: Han
- first_name: Guodong
  full_name: Wang, Guodong
  last_name: Wang
citation:
  ama: Liu Z, Yang N, Lv Y, et al. The CLE gene family in Populus trichocarpa. <i>Plant
    Signaling &#38; Behavior</i>. 2016;11(6). doi:<a href="https://doi.org/10.1080/15592324.2016.1191734">10.1080/15592324.2016.1191734</a>
  apa: Liu, Z., Yang, N., Lv, Y., Pan, L., Lv, S., Han, H., &#38; Wang, G. (2016).
    The CLE gene family in Populus trichocarpa. <i>Plant Signaling &#38; Behavior</i>.
    Taylor &#38; Francis. <a href="https://doi.org/10.1080/15592324.2016.1191734">https://doi.org/10.1080/15592324.2016.1191734</a>
  chicago: Liu, Zhijun, Nan Yang, Yanting Lv, Lixia Pan, Shuo Lv, Huibin Han, and
    Guodong Wang. “The CLE Gene Family in Populus Trichocarpa.” <i>Plant Signaling
    &#38; Behavior</i>. Taylor &#38; Francis, 2016. <a href="https://doi.org/10.1080/15592324.2016.1191734">https://doi.org/10.1080/15592324.2016.1191734</a>.
  ieee: Z. Liu <i>et al.</i>, “The CLE gene family in Populus trichocarpa,” <i>Plant
    Signaling &#38; Behavior</i>, vol. 11, no. 6. Taylor &#38; Francis, 2016.
  ista: Liu Z, Yang N, Lv Y, Pan L, Lv S, Han H, Wang G. 2016. The CLE gene family
    in Populus trichocarpa. Plant Signaling &#38; Behavior. 11(6), e1191734.
  mla: Liu, Zhijun, et al. “The CLE Gene Family in Populus Trichocarpa.” <i>Plant
    Signaling &#38; Behavior</i>, vol. 11, no. 6, e1191734, Taylor &#38; Francis,
    2016, doi:<a href="https://doi.org/10.1080/15592324.2016.1191734">10.1080/15592324.2016.1191734</a>.
  short: Z. Liu, N. Yang, Y. Lv, L. Pan, S. Lv, H. Han, G. Wang, Plant Signaling &#38;
    Behavior 11 (2016).
date_created: 2018-12-11T11:46:53Z
date_published: 2016-06-02T00:00:00Z
date_updated: 2023-10-17T11:13:40Z
day: '02'
department:
- _id: JiFr
doi: 10.1080/15592324.2016.1191734
intvolume: '        11'
issue: '6'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4973754/
month: '06'
oa: 1
oa_version: Submitted Version
publication: Plant Signaling & Behavior
publication_status: published
publisher: Taylor & Francis
publist_id: '7308'
quality_controlled: '1'
scopus_import: '1'
status: public
title: The CLE gene family in Populus trichocarpa
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 11
year: '2016'
...
---
_id: '262'
abstract:
- lang: eng
  text: For any number field we calculate the exact proportion of rational numbers
    which are everywhere locally a norm but not globally a norm from the number field.
acknowledgement: While working on this paper the first author was supported by ERC
  grant 306457.
author:
- first_name: Timothy D
  full_name: Timothy Browning
  id: 35827D50-F248-11E8-B48F-1D18A9856A87
  last_name: Browning
  orcid: 0000-0002-8314-0177
- first_name: Rachel
  full_name: Newton, Rachel
  last_name: Newton
citation:
  ama: Browning TD, Newton R. The proportion of failures of the Hasse norm principle.
    <i>Mathematika</i>. 2016;62(2):337-347. doi:<a href="https://doi.org/10.1112/S0025579315000261">10.1112/S0025579315000261</a>
  apa: Browning, T. D., &#38; Newton, R. (2016). The proportion of failures of the
    Hasse norm principle. <i>Mathematika</i>. Cambridge University Press. <a href="https://doi.org/10.1112/S0025579315000261">https://doi.org/10.1112/S0025579315000261</a>
  chicago: Browning, Timothy D, and Rachel Newton. “The Proportion of Failures of
    the Hasse Norm Principle.” <i>Mathematika</i>. Cambridge University Press, 2016.
    <a href="https://doi.org/10.1112/S0025579315000261">https://doi.org/10.1112/S0025579315000261</a>.
  ieee: T. D. Browning and R. Newton, “The proportion of failures of the Hasse norm
    principle,” <i>Mathematika</i>, vol. 62, no. 2. Cambridge University Press, pp.
    337–347, 2016.
  ista: Browning TD, Newton R. 2016. The proportion of failures of the Hasse norm
    principle. Mathematika. 62(2), 337–347.
  mla: Browning, Timothy D., and Rachel Newton. “The Proportion of Failures of the
    Hasse Norm Principle.” <i>Mathematika</i>, vol. 62, no. 2, Cambridge University
    Press, 2016, pp. 337–47, doi:<a href="https://doi.org/10.1112/S0025579315000261">10.1112/S0025579315000261</a>.
  short: T.D. Browning, R. Newton, Mathematika 62 (2016) 337–347.
date_created: 2018-12-11T11:45:29Z
date_published: 2016-01-22T00:00:00Z
date_updated: 2021-01-12T06:58:37Z
day: '22'
doi: 10.1112/S0025579315000261
extern: 1
intvolume: '        62'
issue: '2'
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1411.7775
month: '01'
oa: 1
page: 337 - 347
publication: Mathematika
publication_status: published
publisher: Cambridge University Press
publist_id: '7640'
quality_controlled: 0
status: public
title: The proportion of failures of the Hasse norm principle
type: journal_article
volume: 62
year: '2016'
...
---
_id: '263'
abstract:
- lang: eng
  text: We count rational points of bounded height on the Cayley ruled cubic surface
    and interpret the result in the context of general conjectures due to Batyrev
    and Tschinkel.
acknowledgement: 'While working on this paper the first author was supported by an
  IUF Junior and the second author was supported by ERC grant 306457. '
author:
- first_name: Régis
  full_name: de la Bretèche, Régis
  last_name: De La Bretèche
- first_name: Timothy D
  full_name: Timothy Browning
  id: 35827D50-F248-11E8-B48F-1D18A9856A87
  last_name: Browning
  orcid: 0000-0002-8314-0177
- first_name: Per
  full_name: Salberger, Per
  last_name: Salberger
citation:
  ama: De La Bretèche R, Browning TD, Salberger P. Counting rational points on the
    Cayley ruled cubic. <i>European Journal of Mathematics</i>. 2016;2(1):55-72. doi:<a
    href="https://doi.org/10.1007/s40879-015-0049-1">10.1007/s40879-015-0049-1</a>
  apa: De La Bretèche, R., Browning, T. D., &#38; Salberger, P. (2016). Counting rational
    points on the Cayley ruled cubic. <i>European Journal of Mathematics</i>. Springer
    Nature. <a href="https://doi.org/10.1007/s40879-015-0049-1">https://doi.org/10.1007/s40879-015-0049-1</a>
  chicago: De La Bretèche, Régis, Timothy D Browning, and Per Salberger. “Counting
    Rational Points on the Cayley Ruled Cubic.” <i>European Journal of Mathematics</i>.
    Springer Nature, 2016. <a href="https://doi.org/10.1007/s40879-015-0049-1">https://doi.org/10.1007/s40879-015-0049-1</a>.
  ieee: R. De La Bretèche, T. D. Browning, and P. Salberger, “Counting rational points
    on the Cayley ruled cubic,” <i>European Journal of Mathematics</i>, vol. 2, no.
    1. Springer Nature, pp. 55–72, 2016.
  ista: De La Bretèche R, Browning TD, Salberger P. 2016. Counting rational points
    on the Cayley ruled cubic. European Journal of Mathematics. 2(1), 55–72.
  mla: De La Bretèche, Régis, et al. “Counting Rational Points on the Cayley Ruled
    Cubic.” <i>European Journal of Mathematics</i>, vol. 2, no. 1, Springer Nature,
    2016, pp. 55–72, doi:<a href="https://doi.org/10.1007/s40879-015-0049-1">10.1007/s40879-015-0049-1</a>.
  short: R. De La Bretèche, T.D. Browning, P. Salberger, European Journal of Mathematics
    2 (2016) 55–72.
date_created: 2018-12-11T11:45:30Z
date_published: 2016-03-01T00:00:00Z
date_updated: 2021-01-12T06:58:41Z
day: '01'
doi: 10.1007/s40879-015-0049-1
extern: 1
intvolume: '         2'
issue: '1'
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1410.3855
month: '03'
oa: 1
page: 55 - 72
publication: European Journal of Mathematics
publication_status: published
publisher: Springer Nature
publist_id: '7639'
quality_controlled: 0
status: public
title: Counting rational points on the Cayley ruled cubic
type: journal_article
volume: 2
year: '2016'
...
---
_id: '264'
abstract:
- lang: eng
  text: Given a family of varieties over a number field, we determine conditions under
    which there is a Brauer-Manin obstruction to weak approximation for 100% of the
    fibres which are everywhere locally soluble.
acknowledgement: While working on this paper the second author was supported by ERC
  grant 306457.
author:
- first_name: Maritn
  full_name: Bright, Maritn J
  last_name: Bright
- first_name: Timothy D
  full_name: Timothy Browning
  id: 35827D50-F248-11E8-B48F-1D18A9856A87
  last_name: Browning
  orcid: 0000-0002-8314-0177
- first_name: Daniel
  full_name: Loughran, Daniel
  last_name: Loughran
citation:
  ama: Bright M, Browning TD, Loughran D. Failures of weak approximation in families.
    <i>Compositio Mathematica</i>. 2016;152(7):1435-1475. doi:<a href="https://doi.org/10.1112/S0010437X16007405">10.1112/S0010437X16007405</a>
  apa: Bright, M., Browning, T. D., &#38; Loughran, D. (2016). Failures of weak approximation
    in families. <i>Compositio Mathematica</i>. Cambridge University Press. <a href="https://doi.org/10.1112/S0010437X16007405">https://doi.org/10.1112/S0010437X16007405</a>
  chicago: Bright, Maritn, Timothy D Browning, and Daniel Loughran. “Failures of Weak
    Approximation in Families.” <i>Compositio Mathematica</i>. Cambridge University
    Press, 2016. <a href="https://doi.org/10.1112/S0010437X16007405">https://doi.org/10.1112/S0010437X16007405</a>.
  ieee: M. Bright, T. D. Browning, and D. Loughran, “Failures of weak approximation
    in families,” <i>Compositio Mathematica</i>, vol. 152, no. 7. Cambridge University
    Press, pp. 1435–1475, 2016.
  ista: Bright M, Browning TD, Loughran D. 2016. Failures of weak approximation in
    families. Compositio Mathematica. 152(7), 1435–1475.
  mla: Bright, Maritn, et al. “Failures of Weak Approximation in Families.” <i>Compositio
    Mathematica</i>, vol. 152, no. 7, Cambridge University Press, 2016, pp. 1435–75,
    doi:<a href="https://doi.org/10.1112/S0010437X16007405">10.1112/S0010437X16007405</a>.
  short: M. Bright, T.D. Browning, D. Loughran, Compositio Mathematica 152 (2016)
    1435–1475.
date_created: 2018-12-11T11:45:30Z
date_published: 2016-07-01T00:00:00Z
date_updated: 2021-01-12T06:58:45Z
day: '01'
doi: 10.1112/S0010437X16007405
extern: 1
intvolume: '       152'
issue: '7'
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1506.01817
month: '07'
oa: 1
page: 1435 - 1475
publication: Compositio Mathematica
publication_status: published
publisher: Cambridge University Press
publist_id: '7638'
quality_controlled: 0
status: public
title: Failures of weak approximation in families
type: journal_article
volume: 152
year: '2016'
...
---
_id: '1082'
abstract:
- lang: eng
  text: In many applications, it is desirable to extract only the relevant aspects
    of data. A principled way to do this is the information bottleneck (IB) method,
    where one seeks a code that maximises information about a relevance variable,
    Y, while constraining the information encoded about the original data, X. Unfortunately
    however, the IB method is computationally demanding when data are high-dimensional
    and/or non-gaussian. Here we propose an approximate variational scheme for maximising
    a lower bound on the IB objective, analogous to variational EM. Using this method,
    we derive an IB algorithm to recover features that are both relevant and sparse.
    Finally, we demonstrate how kernelised versions of the algorithm can be used to
    address a broad range of problems with non-linear relation between X and Y.
alternative_title:
- Advances in Neural Information Processing Systems
author:
- first_name: Matthew J
  full_name: Chalk, Matthew J
  id: 2BAAC544-F248-11E8-B48F-1D18A9856A87
  last_name: Chalk
  orcid: 0000-0001-7782-4436
- first_name: Olivier
  full_name: Marre, Olivier
  last_name: Marre
- first_name: Gasper
  full_name: Tkacik, Gasper
  id: 3D494DCA-F248-11E8-B48F-1D18A9856A87
  last_name: Tkacik
  orcid: 0000-0002-6699-1455
citation:
  ama: 'Chalk MJ, Marre O, Tkačik G. Relevant sparse codes with variational information
    bottleneck. In: Vol 29. Neural Information Processing Systems; 2016:1965-1973.'
  apa: 'Chalk, M. J., Marre, O., &#38; Tkačik, G. (2016). Relevant sparse codes with
    variational information bottleneck (Vol. 29, pp. 1965–1973). Presented at the
    NIPS: Neural Information Processing Systems, Barcelona, Spain: Neural Information
    Processing Systems.'
  chicago: Chalk, Matthew J, Olivier Marre, and Gašper Tkačik. “Relevant Sparse Codes
    with Variational Information Bottleneck,” 29:1965–73. Neural Information Processing
    Systems, 2016.
  ieee: 'M. J. Chalk, O. Marre, and G. Tkačik, “Relevant sparse codes with variational
    information bottleneck,” presented at the NIPS: Neural Information Processing
    Systems, Barcelona, Spain, 2016, vol. 29, pp. 1965–1973.'
  ista: 'Chalk MJ, Marre O, Tkačik G. 2016. Relevant sparse codes with variational
    information bottleneck. NIPS: Neural Information Processing Systems, Advances
    in Neural Information Processing Systems, vol. 29, 1965–1973.'
  mla: Chalk, Matthew J., et al. <i>Relevant Sparse Codes with Variational Information
    Bottleneck</i>. Vol. 29, Neural Information Processing Systems, 2016, pp. 1965–73.
  short: M.J. Chalk, O. Marre, G. Tkačik, in:, Neural Information Processing Systems,
    2016, pp. 1965–1973.
conference:
  end_date: 2016-12-10
  location: Barcelona, Spain
  name: 'NIPS: Neural Information Processing Systems'
  start_date: 2016-12-05
date_created: 2018-12-11T11:50:03Z
date_published: 2016-12-01T00:00:00Z
date_updated: 2021-01-12T06:48:09Z
day: '01'
department:
- _id: GaTk
intvolume: '        29'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1605.07332
month: '12'
oa: 1
oa_version: Preprint
page: 1965-1973
publication_status: published
publisher: Neural Information Processing Systems
publist_id: '6298'
quality_controlled: '1'
related_material:
  link:
  - relation: other
    url: https://papers.nips.cc/paper/6101-relevant-sparse-codes-with-variational-information-bottleneck
scopus_import: 1
status: public
title: Relevant sparse codes with variational information bottleneck
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 29
year: '2016'
...
