[{"article_processing_charge":"No","language":[{"iso":"eng"}],"year":"2013","status":"public","month":"08","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","day":"01","scopus_import":"1","oa_version":"Published Version","quality_controlled":"1","oa":1,"volume":54,"doi":"10.3189/2013aog63a477","keyword":["Earth-Surface Processes"],"publication":"Annals of Glaciology","intvolume":"        54","type":"journal_article","publication_identifier":{"eissn":["1727-5644"],"issn":["0260-3055"]},"issue":"63","main_file_link":[{"open_access":"1","url":"https://doi.org/10.3189/2013aog63a477"}],"author":[{"last_name":"Petersen","first_name":"Lene","full_name":"Petersen, Lene"},{"last_name":"Pellicciotti","id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","full_name":"Pellicciotti, Francesca","first_name":"Francesca"},{"full_name":"Juszak, Inge","first_name":"Inge","last_name":"Juszak"},{"full_name":"Carenzo, Marco","first_name":"Marco","last_name":"Carenzo"},{"last_name":"Brock","first_name":"Ben","full_name":"Brock, Ben"}],"date_updated":"2023-02-21T10:18:24Z","abstract":[{"text":"Near-surface air temperature, typically measured at a height of 2 m, is the most important control on the energy exchange and the melt rate at a snow or ice surface. It is distributed in a simplistic manner in most glacier melt models by using constant linear lapse rates, which poorly represent the actual spatial and temporal variability of air temperature. In this paper, we test a simple thermodynamic model proposed by Greuell and Böhm in 1998 as an alternative, using a new dataset of air temperature measurements from along the flowline of Haut Glacier d’Arolla, Switzerland. The unmodified model performs little better than assuming a constant linear lapse rate. When modified to allow the ratio of the boundary layer height to the bulk heat transfer coefficient to vary along the flowline, the model matches measured air temperatures better, and a further reduction of the root-mean-square error is obtained, although there is still considerable scope for improvement. The modified model is shown to perform best under conditions favourable to the development of katabatic winds – few clouds, positive ambient air temperature, limited influence of synoptic or valley winds and a long fetch – but its performance is poor under cloudy conditions.","lang":"eng"}],"page":"120-130","article_type":"original","_id":"12642","date_published":"2013-08-01T00:00:00Z","extern":"1","title":"Suitability of a constant air temperature lapse rate over an Alpine glacier: Testing the Greuell and Böhm model as an alternative","citation":{"ista":"Petersen L, Pellicciotti F, Juszak I, Carenzo M, Brock B. 2013. Suitability of a constant air temperature lapse rate over an Alpine glacier: Testing the Greuell and Böhm model as an alternative. Annals of Glaciology. 54(63), 120–130.","apa":"Petersen, L., Pellicciotti, F., Juszak, I., Carenzo, M., &#38; Brock, B. (2013). Suitability of a constant air temperature lapse rate over an Alpine glacier: Testing the Greuell and Böhm model as an alternative. <i>Annals of Glaciology</i>. International Glaciological Society. <a href=\"https://doi.org/10.3189/2013aog63a477\">https://doi.org/10.3189/2013aog63a477</a>","ama":"Petersen L, Pellicciotti F, Juszak I, Carenzo M, Brock B. Suitability of a constant air temperature lapse rate over an Alpine glacier: Testing the Greuell and Böhm model as an alternative. <i>Annals of Glaciology</i>. 2013;54(63):120-130. doi:<a href=\"https://doi.org/10.3189/2013aog63a477\">10.3189/2013aog63a477</a>","ieee":"L. Petersen, F. Pellicciotti, I. Juszak, M. Carenzo, and B. Brock, “Suitability of a constant air temperature lapse rate over an Alpine glacier: Testing the Greuell and Böhm model as an alternative,” <i>Annals of Glaciology</i>, vol. 54, no. 63. International Glaciological Society, pp. 120–130, 2013.","short":"L. Petersen, F. Pellicciotti, I. Juszak, M. Carenzo, B. Brock, Annals of Glaciology 54 (2013) 120–130.","mla":"Petersen, Lene, et al. “Suitability of a Constant Air Temperature Lapse Rate over an Alpine Glacier: Testing the Greuell and Böhm Model as an Alternative.” <i>Annals of Glaciology</i>, vol. 54, no. 63, International Glaciological Society, 2013, pp. 120–30, doi:<a href=\"https://doi.org/10.3189/2013aog63a477\">10.3189/2013aog63a477</a>.","chicago":"Petersen, Lene, Francesca Pellicciotti, Inge Juszak, Marco Carenzo, and Ben Brock. “Suitability of a Constant Air Temperature Lapse Rate over an Alpine Glacier: Testing the Greuell and Böhm Model as an Alternative.” <i>Annals of Glaciology</i>. International Glaciological Society, 2013. <a href=\"https://doi.org/10.3189/2013aog63a477\">https://doi.org/10.3189/2013aog63a477</a>."},"publication_status":"published","date_created":"2023-02-20T08:17:29Z","publisher":"International Glaciological Society"},{"day":"27","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","month":"04","article_processing_charge":"No","language":[{"iso":"eng"}],"status":"public","year":"2013","quality_controlled":"1","oa_version":"Published Version","scopus_import":"1","oa":1,"volume":118,"publication":"Journal of Geophysical Research: Atmospheres","doi":"10.1002/jgrd.50277","keyword":["Space and Planetary Science","Earth and Planetary Sciences (miscellaneous)","Atmospheric Science","Geophysics"],"publication_identifier":{"issn":["2169-897X"]},"intvolume":"       118","type":"journal_article","page":"3066-3084","article_type":"original","abstract":[{"text":"Parameterizations of incoming longwave radiation are increasingly receiving attention for both low and high elevation glacierized sites. In this paper, we test 13 clear-sky parameterizations combined with seven cloud corrections for all-sky atmospheric emissivity at one location on Haut Glacier d'Arolla. We also analyze the four seasons separately and conduct a cross-validation to test the parameters’ robustness. The best parameterization is the one by Dilley and O'Brien, B for clear-sky conditions combined with Unsworth and Monteith cloud correction. This model is also the most robust when tested in cross-validation. When validated at different sites in the southern Alps of Switzerland and north-western Italian Alps, all parameterizations show a substantial decrease in performance, except for one site, thus suggesting that it is important to recalibrate parameterizations of incoming longwave radiation for different locations. We argue that this is due to differences in the structure of the atmosphere at the sites. We also quantify the effect that the incoming longwave radiation parameterizations have on energy-balance melt modeling, and show that recalibration of model parameters is needed. Using parameters from other sites leads to a significant underestimation of melt and to an error that is larger than that associated with using different parameterizations. Once recalibrated, however, the parameters of most models seem to be stable over seasons and years at the location on Haut Glacier d'Arolla.","lang":"eng"}],"date_updated":"2023-02-21T10:10:46Z","main_file_link":[{"url":"https://doi.org/10.1002/jgrd.50277","open_access":"1"}],"author":[{"last_name":"Juszak","full_name":"Juszak, I.","first_name":"I."},{"id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","last_name":"Pellicciotti","full_name":"Pellicciotti, Francesca","first_name":"Francesca"}],"issue":"8","citation":{"ama":"Juszak I, Pellicciotti F. A comparison of parameterizations of incoming longwave radiation over melting glaciers: Model robustness and seasonal variability. <i>Journal of Geophysical Research: Atmospheres</i>. 2013;118(8):3066-3084. doi:<a href=\"https://doi.org/10.1002/jgrd.50277\">10.1002/jgrd.50277</a>","ieee":"I. Juszak and F. Pellicciotti, “A comparison of parameterizations of incoming longwave radiation over melting glaciers: Model robustness and seasonal variability,” <i>Journal of Geophysical Research: Atmospheres</i>, vol. 118, no. 8. American Geophysical Union, pp. 3066–3084, 2013.","apa":"Juszak, I., &#38; Pellicciotti, F. (2013). A comparison of parameterizations of incoming longwave radiation over melting glaciers: Model robustness and seasonal variability. <i>Journal of Geophysical Research: Atmospheres</i>. American Geophysical Union. <a href=\"https://doi.org/10.1002/jgrd.50277\">https://doi.org/10.1002/jgrd.50277</a>","mla":"Juszak, I., and Francesca Pellicciotti. “A Comparison of Parameterizations of Incoming Longwave Radiation over Melting Glaciers: Model Robustness and Seasonal Variability.” <i>Journal of Geophysical Research: Atmospheres</i>, vol. 118, no. 8, American Geophysical Union, 2013, pp. 3066–84, doi:<a href=\"https://doi.org/10.1002/jgrd.50277\">10.1002/jgrd.50277</a>.","chicago":"Juszak, I., and Francesca Pellicciotti. “A Comparison of Parameterizations of Incoming Longwave Radiation over Melting Glaciers: Model Robustness and Seasonal Variability.” <i>Journal of Geophysical Research: Atmospheres</i>. American Geophysical Union, 2013. <a href=\"https://doi.org/10.1002/jgrd.50277\">https://doi.org/10.1002/jgrd.50277</a>.","short":"I. Juszak, F. Pellicciotti, Journal of Geophysical Research: Atmospheres 118 (2013) 3066–3084.","ista":"Juszak I, Pellicciotti F. 2013. A comparison of parameterizations of incoming longwave radiation over melting glaciers: Model robustness and seasonal variability. Journal of Geophysical Research: Atmospheres. 118(8), 3066–3084."},"publication_status":"published","date_created":"2023-02-20T08:17:34Z","title":"A comparison of parameterizations of incoming longwave radiation over melting glaciers: Model robustness and seasonal variability","_id":"12643","date_published":"2013-04-27T00:00:00Z","extern":"1","publisher":"American Geophysical Union"},{"oa":1,"volume":11,"doi":"10.1186/1479-5876-11-307","publication":"Journal of Translational Medicine","article_processing_charge":"No","status":"public","language":[{"iso":"eng"}],"year":"2013","month":"12","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","day":"12","pmid":1,"oa_version":"None","external_id":{"pmid":["24330813"]},"has_accepted_license":"1","quality_controlled":"1","date_published":"2013-12-12T00:00:00Z","_id":"8245","extern":"1","title":"Trastuzumab mediates antibody-dependent cell-mediated cytotoxicity and phagocytosis to the same extent in both adjuvant and metastatic HER2/neu breast cancer patients","publication_status":"published","citation":{"ista":"Petricevic B, Laengle J, Singer J, Sachet M, Singer J, Steger G, Bartsch R, Jensen-Jarolim E, Bergmann M. 2013. Trastuzumab mediates antibody-dependent cell-mediated cytotoxicity and phagocytosis to the same extent in both adjuvant and metastatic HER2/neu breast cancer patients. Journal of Translational Medicine. 11, 307.","ama":"Petricevic B, Laengle J, Singer J, et al. Trastuzumab mediates antibody-dependent cell-mediated cytotoxicity and phagocytosis to the same extent in both adjuvant and metastatic HER2/neu breast cancer patients. <i>Journal of Translational Medicine</i>. 2013;11. doi:<a href=\"https://doi.org/10.1186/1479-5876-11-307\">10.1186/1479-5876-11-307</a>","ieee":"B. Petricevic <i>et al.</i>, “Trastuzumab mediates antibody-dependent cell-mediated cytotoxicity and phagocytosis to the same extent in both adjuvant and metastatic HER2/neu breast cancer patients,” <i>Journal of Translational Medicine</i>, vol. 11. Springer Nature, 2013.","apa":"Petricevic, B., Laengle, J., Singer, J., Sachet, M., Singer, J., Steger, G., … Bergmann, M. (2013). Trastuzumab mediates antibody-dependent cell-mediated cytotoxicity and phagocytosis to the same extent in both adjuvant and metastatic HER2/neu breast cancer patients. <i>Journal of Translational Medicine</i>. Springer Nature. <a href=\"https://doi.org/10.1186/1479-5876-11-307\">https://doi.org/10.1186/1479-5876-11-307</a>","mla":"Petricevic, Branka, et al. “Trastuzumab Mediates Antibody-Dependent Cell-Mediated Cytotoxicity and Phagocytosis to the Same Extent in Both Adjuvant and Metastatic HER2/Neu Breast Cancer Patients.” <i>Journal of Translational Medicine</i>, vol. 11, 307, Springer Nature, 2013, doi:<a href=\"https://doi.org/10.1186/1479-5876-11-307\">10.1186/1479-5876-11-307</a>.","chicago":"Petricevic, Branka, Johannes Laengle, Josef Singer, Monika Sachet, Judit Singer, Guenther Steger, Rupert Bartsch, Erika Jensen-Jarolim, and Michael Bergmann. “Trastuzumab Mediates Antibody-Dependent Cell-Mediated Cytotoxicity and Phagocytosis to the Same Extent in Both Adjuvant and Metastatic HER2/Neu Breast Cancer Patients.” <i>Journal of Translational Medicine</i>. Springer Nature, 2013. <a href=\"https://doi.org/10.1186/1479-5876-11-307\">https://doi.org/10.1186/1479-5876-11-307</a>.","short":"B. Petricevic, J. Laengle, J. Singer, M. Sachet, J. Singer, G. Steger, R. Bartsch, E. Jensen-Jarolim, M. Bergmann, Journal of Translational Medicine 11 (2013)."},"date_created":"2020-08-10T11:54:34Z","publisher":"Springer Nature","license":"https://creativecommons.org/licenses/by/3.0/","file":[{"date_updated":"2020-08-10T13:45:19Z","relation":"main_file","access_level":"open_access","creator":"dernst","success":1,"file_id":"8247","file_size":777311,"file_name":"2013_JoTM_Petricevic.pdf","date_created":"2020-08-10T13:45:19Z","content_type":"application/pdf"}],"tmp":{"name":"Creative Commons Attribution 3.0 Unported (CC BY 3.0)","image":"/images/cc_by.png","short":"CC BY (3.0)","legal_code_url":"https://creativecommons.org/licenses/by/3.0/legalcode"},"intvolume":"        11","type":"journal_article","publication_identifier":{"issn":["1479-5876"]},"ddc":["570"],"file_date_updated":"2020-08-10T13:45:19Z","author":[{"last_name":"Petricevic","full_name":"Petricevic, Branka","first_name":"Branka"},{"last_name":"Laengle","full_name":"Laengle, Johannes","first_name":"Johannes"},{"last_name":"Singer","full_name":"Singer, Josef","first_name":"Josef"},{"first_name":"Monika","full_name":"Sachet, Monika","last_name":"Sachet"},{"orcid":"0000-0002-8777-3502","full_name":"Fazekas, Judit","first_name":"Judit","last_name":"Fazekas","id":"36432834-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Guenther","full_name":"Steger, Guenther","last_name":"Steger"},{"first_name":"Rupert","full_name":"Bartsch, Rupert","last_name":"Bartsch"},{"first_name":"Erika","full_name":"Jensen-Jarolim, Erika","last_name":"Jensen-Jarolim"},{"last_name":"Bergmann","first_name":"Michael","full_name":"Bergmann, Michael"}],"date_updated":"2022-08-25T14:52:39Z","article_number":"307","abstract":[{"lang":"eng","text":"Background: Monoclonal antibodies (mAb), such as trastuzumab are a valuable addition to breast cancer therapy.\r\nData obtained from neoadjuvant settings revealed that antibody-dependent cell-mediated cytotoxicity (ADCC) is a\r\nmajor mechanism of action for the mAb trastuzumab. Conflicting results still call into question whether disease\r\nprogression, prolonged treatment or concomitant chemotherapy influences ADCC and related immunological\r\nphenomena.\r\nMethods: We analyzed the activity of ADCC and antibody-dependent cell-mediated phagocytosis (ADCP) of\r\nperipheral blood mononuclear cells (PBMCs) from human epidermal growth factor receptor 2 (HER2/neu) positive\r\nbreast cancer patients receiving trastuzumab therapy either in an adjuvant (n = 13) or metastatic (n = 15) setting as\r\nwell as from trastuzumab treatment-naive (t-naive) HER2/neu negative patients (n = 15). PBMCs from healthy volunteers\r\n(n = 24) were used as controls. ADCC and ADCP activity was correlated with the expression of antibody binding\r\nFc-gamma receptor (FcγR)I (CD64), FcγRII (CD32) and FcγRIII (CD16) on CD14+ (monocytes) and CD56+ (NK) cells, as well as the expression of CD107a+ (LAMP-1) on CD56+ cells and the total amount of CD4+CD25+FOXP3+ (Treg) cells. In metastatic patients, markers were correlated with progression-free survival (PFS).\r\nResults: ADCC activity was significantly down regulated in metastatic, adjuvant and t-naive patient cohorts as compared to healthy controls. Reduced ADCC activity was inversely correlated with the expression of CD107a on CD56+\r\ncells in adjuvant patients. ADCC and ADCP activity of the patient cohorts were similar, regardless of treatment duration\r\nor additional chemotherapy. PFS in metastatic patients inversely correlated with the number of peripheral Treg cells.\r\nConclusion: The reduction of ADCC in patients as compared to healthy controls calls for adjuvant strategies, such as\r\nimmune-enhancing agents, to improve the activity of trastuzumab. However, efficacy of trastuzumab-specific ADCC\r\nand ADCP appears not to be affected by treatment duration, disease progression or concomitant chemotherapy. This\r\nfinding supports the application of trastuzumab at any stage of the disease."}]},{"ddc":["580"],"type":"journal_article","intvolume":"         4","article_number":"451","abstract":[{"text":"As sessile organisms, plants have to be able to adapt to a continuously changing environment. Plants that perceive some of these changes as stress signals activate signaling pathways to modulate their development and to enable them to survive. The complex responses to environmental cues are to a large extent mediated by plant hormones that together orchestrate the final plant response. The phytohormone cytokinin is involved in many plant developmental processes. Recently, it has been established that cytokinin plays an important role in stress responses, but does not act alone. Indeed, the hormonal control of plant development and stress adaptation is the outcome of a complex network of multiple synergistic and antagonistic interactions between various hormones. Here, we review the recent findings on the cytokinin function as part of this hormonal network. We focus on the importance of the crosstalk between cytokinin and other hormones, such as abscisic acid, jasmonate, salicylic acid, ethylene, and auxin in the modulation of plant development and stress adaptation. Finally, the impact of the current research in the biotechnological industry will be discussed.","lang":"eng"}],"date_updated":"2021-01-12T08:17:50Z","author":[{"last_name":"O'Brien","first_name":"José","full_name":"O'Brien, José"},{"id":"38F4F166-F248-11E8-B48F-1D18A9856A87","last_name":"Benková","orcid":"0000-0002-8510-9739","first_name":"Eva","full_name":"Benková, Eva"}],"file_date_updated":"2020-07-14T12:48:11Z","citation":{"apa":"O’Brien, J., &#38; Benková, E. (2013). Cytokinin cross talking during biotic and abiotic stress responses. <i>Frontiers in Plant Science</i>. Frontiers Research Foundation. <a href=\"https://doi.org/10.3389/fpls.2013.00451\">https://doi.org/10.3389/fpls.2013.00451</a>","ieee":"J. O’Brien and E. Benková, “Cytokinin cross talking during biotic and abiotic stress responses,” <i>Frontiers in Plant Science</i>, vol. 4. Frontiers Research Foundation, 2013.","ama":"O’Brien J, Benková E. Cytokinin cross talking during biotic and abiotic stress responses. <i>Frontiers in Plant Science</i>. 2013;4. doi:<a href=\"https://doi.org/10.3389/fpls.2013.00451\">10.3389/fpls.2013.00451</a>","short":"J. O’Brien, E. Benková, Frontiers in Plant Science 4 (2013).","chicago":"O’Brien, José, and Eva Benková. “Cytokinin Cross Talking during Biotic and Abiotic Stress Responses.” <i>Frontiers in Plant Science</i>. Frontiers Research Foundation, 2013. <a href=\"https://doi.org/10.3389/fpls.2013.00451\">https://doi.org/10.3389/fpls.2013.00451</a>.","mla":"O’Brien, José, and Eva Benková. “Cytokinin Cross Talking during Biotic and Abiotic Stress Responses.” <i>Frontiers in Plant Science</i>, vol. 4, 451, Frontiers Research Foundation, 2013, doi:<a href=\"https://doi.org/10.3389/fpls.2013.00451\">10.3389/fpls.2013.00451</a>.","ista":"O’Brien J, Benková E. 2013. Cytokinin cross talking during biotic and abiotic stress responses. Frontiers in Plant Science. 4, 451."},"publication_status":"published","date_created":"2018-12-11T11:48:43Z","title":"Cytokinin cross talking during biotic and abiotic stress responses","ec_funded":1,"_id":"827","date_published":"2013-11-19T00:00:00Z","tmp":{"image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"file":[{"file_name":"2013_FrontiersPlant_OBrien.pdf","date_created":"2019-01-31T10:40:38Z","content_type":"application/pdf","checksum":"fdc25ddd1bf9a99b99f662cdbafeddd4","date_updated":"2020-07-14T12:48:11Z","relation":"main_file","access_level":"open_access","creator":"dernst","file_id":"5903","file_size":953299}],"license":"https://creativecommons.org/licenses/by/4.0/","publisher":"Frontiers Research Foundation","department":[{"_id":"EvBe"}],"day":"19","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publist_id":"6821","month":"11","language":[{"iso":"eng"}],"year":"2013","status":"public","quality_controlled":"1","has_accepted_license":"1","oa_version":"Published Version","scopus_import":1,"oa":1,"volume":4,"publication":"Frontiers in Plant Science","doi":"10.3389/fpls.2013.00451","project":[{"_id":"253FCA6A-B435-11E9-9278-68D0E5697425","name":"Hormonal cross-talk in plant organogenesis","call_identifier":"FP7","grant_number":"207362"}]},{"publication":"Frontiers in Plant Science","doi":"10.3389/fpls.2013.00537","project":[{"call_identifier":"FP7","grant_number":"207362","_id":"253FCA6A-B435-11E9-9278-68D0E5697425","name":"Hormonal cross-talk in plant organogenesis"}],"oa":1,"volume":4,"has_accepted_license":"1","quality_controlled":"1","scopus_import":1,"oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publist_id":"6820","day":"26","status":"public","year":"2013","language":[{"iso":"eng"}],"month":"12","file":[{"file_size":710835,"file_id":"5902","creator":"dernst","access_level":"open_access","relation":"main_file","checksum":"0185b3c4d7df9a94bd3ce5a66d213506","date_updated":"2020-07-14T12:48:11Z","content_type":"application/pdf","date_created":"2019-01-31T10:36:43Z","file_name":"2013_FrontiersPlant_Cuesta.pdf"}],"tmp":{"image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"publisher":"Frontiers Research Foundation","department":[{"_id":"EvBe"}],"citation":{"ista":"Cuesta C, Wabnik KT, Benková E. 2013. Systems approaches to study root architecture dynamics. Frontiers in Plant Science. 4, 537.","short":"C. Cuesta, K.T. Wabnik, E. Benková, Frontiers in Plant Science 4 (2013).","chicago":"Cuesta, Candela, Krzysztof T Wabnik, and Eva Benková. “Systems Approaches to Study Root Architecture Dynamics.” <i>Frontiers in Plant Science</i>. Frontiers Research Foundation, 2013. <a href=\"https://doi.org/10.3389/fpls.2013.00537\">https://doi.org/10.3389/fpls.2013.00537</a>.","mla":"Cuesta, Candela, et al. “Systems Approaches to Study Root Architecture Dynamics.” <i>Frontiers in Plant Science</i>, vol. 4, 537, Frontiers Research Foundation, 2013, doi:<a href=\"https://doi.org/10.3389/fpls.2013.00537\">10.3389/fpls.2013.00537</a>.","apa":"Cuesta, C., Wabnik, K. T., &#38; Benková, E. (2013). Systems approaches to study root architecture dynamics. <i>Frontiers in Plant Science</i>. Frontiers Research Foundation. <a href=\"https://doi.org/10.3389/fpls.2013.00537\">https://doi.org/10.3389/fpls.2013.00537</a>","ama":"Cuesta C, Wabnik KT, Benková E. Systems approaches to study root architecture dynamics. <i>Frontiers in Plant Science</i>. 2013;4. doi:<a href=\"https://doi.org/10.3389/fpls.2013.00537\">10.3389/fpls.2013.00537</a>","ieee":"C. Cuesta, K. T. Wabnik, and E. Benková, “Systems approaches to study root architecture dynamics,” <i>Frontiers in Plant Science</i>, vol. 4. Frontiers Research Foundation, 2013."},"publication_status":"published","date_created":"2018-12-11T11:48:43Z","_id":"828","date_published":"2013-12-26T00:00:00Z","ec_funded":1,"title":"Systems approaches to study root architecture dynamics","date_updated":"2021-01-12T08:17:52Z","article_number":"537","abstract":[{"text":"The plant root system is essential for providing anchorage to the soil, supplying minerals and water, and synthesizing metabolites. It is a dynamic organ modulated by external cues such as environmental signals, water and nutrients availability, salinity and others. Lateral roots (LRs) are initiated from the primary root post-embryonically, after which they progress through discrete developmental stages which can be independently controlled, providing a high level of plasticity during root system formation. Within this review, main contributions are presented, from the classical forward genetic screens to the more recent high-throughput approaches, combined with computer model predictions, dissecting how LRs and thereby root system architecture is established and developed.","lang":"eng"}],"file_date_updated":"2020-07-14T12:48:11Z","author":[{"orcid":"0000-0003-1923-2410","first_name":"Candela","full_name":"Cuesta, Candela","last_name":"Cuesta","id":"33A3C818-F248-11E8-B48F-1D18A9856A87"},{"orcid":"0000-0001-7263-0560","first_name":"Krzysztof T","full_name":"Wabnik, Krzysztof T","id":"4DE369A4-F248-11E8-B48F-1D18A9856A87","last_name":"Wabnik"},{"full_name":"Benková, Eva","first_name":"Eva","orcid":"0000-0002-8510-9739","last_name":"Benková","id":"38F4F166-F248-11E8-B48F-1D18A9856A87"}],"ddc":["580"],"type":"journal_article","intvolume":"         4"},{"publication":"Forktail","publisher":"Oriental Bird Club","publication_status":"published","citation":{"short":"V. Arkhipov, T. Noah, S. Koschkar, F. Kondrashov, Forktail (2013) 25–30.","chicago":"Arkhipov, Vladimir, T Noah, Steffen Koschkar, and Fyodor Kondrashov. “Birds of Mys Shmidta, North Chukotka, Russia.” <i>Forktail</i>. Oriental Bird Club, 2013.","mla":"Arkhipov, Vladimir, et al. “Birds of Mys Shmidta, North Chukotka, Russia.” <i>Forktail</i>, no. 29, Oriental Bird Club, 2013, pp. 25–30.","apa":"Arkhipov, V., Noah, T., Koschkar, S., &#38; Kondrashov, F. (2013). Birds of Mys Shmidta, north Chukotka, Russia. <i>Forktail</i>. Oriental Bird Club.","ama":"Arkhipov V, Noah T, Koschkar S, Kondrashov F. Birds of Mys Shmidta, north Chukotka, Russia. <i>Forktail</i>. 2013;(29):25-30.","ieee":"V. Arkhipov, T. Noah, S. Koschkar, and F. Kondrashov, “Birds of Mys Shmidta, north Chukotka, Russia,” <i>Forktail</i>, no. 29. Oriental Bird Club, pp. 25–30, 2013.","ista":"Arkhipov V, Noah T, Koschkar S, Kondrashov F. 2013. Birds of Mys Shmidta, north Chukotka, Russia. Forktail. (29), 25–30."},"date_created":"2018-12-11T11:49:07Z","oa":1,"title":"Birds of Mys Shmidta, north Chukotka, Russia","_id":"905","extern":1,"date_published":"2013-09-01T00:00:00Z","quality_controlled":0,"page":"25 - 30","abstract":[{"text":"A survey of avifauna was carried out in the Mys Shmidta area, north Chukotka, Russia from 8 June to 12 July 2011. A total of 90 species was recorded in the area, which together with literature data made a final list of 104 species. For several species this area is beyond the northern, north-eastern or north-western limits of their known distribution. We collected new data for 19 globally or locally threatened species. Tundra Swan Cygnus columbianus, Emperor Goose Anser canagica, American Golden Plover Pluvialis dominica, Western Sandpiper Calidris mauri, Semipalmated Sandpiper C. pusilla, Northern House Martin Delichon urbica and Barn Swallow Hirundo rustica were all confirmed to be breeding. Breeding of Brent Goose Branta bernicla nigricans, Spectacled Eider Somateria fischeri and Steller's Eider Polysticta stelleri was judged to be 'very likely'. There was no evidence for breeding of Ross's Gull Rhodostethia rosea despite several records. Two Eurasian Dotterels Eudromias morinellus were recorded displaying for the first time in the area, but the status of the species is unclear. The area is important for Snowy Owl Nyctea scandiaca, and as moulting grounds for Emperor Goose. Canada Goose Branta canadensis, Baikal Teal Anas formosa, Bar-tailed Godwit Limosa lapponica, Slaty-backed Gull Larus schistisagus, Thayer's Gull L. thayeri, Black-headed Gull L. ridibundus, White-tailed Eagle Haliaeetus albicilla, Steller's Sea Eagle H. pelagicus, Osprey Pandion haliaetus, Arctic Warbler Phylloscopus borealis and House Sparrow Passer domesticus are more likely to be rare vagrants or migrants. An observation of a Pine Siskin Carduelis pinus is the first record for Eurasia.","lang":"eng"}],"date_updated":"2021-01-12T08:21:48Z","author":[{"full_name":"Arkhipov, Vladimir Y","first_name":"Vladimir","last_name":"Arkhipov"},{"last_name":"Noah","first_name":"T","full_name":"Noah T"},{"last_name":"Koschkar","first_name":"Steffen","full_name":"Koschkar, Steffen"},{"last_name":"Kondrashov","id":"44FDEF62-F248-11E8-B48F-1D18A9856A87","full_name":"Fyodor Kondrashov","first_name":"Fyodor","orcid":"0000-0001-8243-4694"}],"acknowledgement":"We thank Natalya Kveten and Oksana Makarova, heads of administrations of Mys Shmidta and Ryrkaypiy for hospitality and for help with organising our excursions. Warm thanks too to Pavel Tomkovich for useful comments on local birds and ornithological literature. We are very grateful to The David and Lucile Packard Foundation for the support to Birds Russia’s Spoon-billed Sandpiper  conservation  programme  in  2011 and to Evgeny Syroechkovsky Jr, the leader of the Spoon-billed Sandpiper conservation team in Russia.","main_file_link":[{"url":"http://orientalbirdclub.org/forktail29/","open_access":"1"}],"issue":"29","day":"01","publist_id":"6741","month":"09","year":"2013","type":"journal_article","status":"public"},{"quality_controlled":"1","oa_version":"Published Version","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","day":"07","article_processing_charge":"No","year":"2013","language":[{"iso":"eng"}],"status":"public","month":"11","publication":"Journal of Geophysical Research: Oceans","doi":"10.1002/2013jc009212","oa":1,"volume":118,"date_updated":"2022-01-24T13:46:15Z","abstract":[{"text":"Internal tide driven mixing plays a key role in sustaining the deep ocean stratification and meridional overturning circulation. Internal tides can be generated by topographic horizontal scales ranging from hundreds of meters to tens of kilometers. State of the art topographic products barely resolve scales smaller than ∼10 km in the deep ocean. On these scales abyssal hills dominate ocean floor roughness. The impact of abyssal hill roughness on internal‐tide generation is evaluated in this study. The conversion of M2 barotropic to baroclinic tidal energy is calculated based on linear wave theory both in real and spectral space using the Shuttle Radar Topography Mission SRTM30_PLUS bathymetric product at 1/120° resolution with and without the addition of synthetic abyssal hill roughness. Internal tide generation by abyssal hills integrates to 0.1 TW globally or 0.03 TW when the energy flux is empirically corrected for supercritical slope (i.e., ∼10% of the energy flux due to larger topographic scales resolved in standard products in both cases). The abyssal hill driven energy conversion is dominated by mid‐ocean ridges, where abyssal hill roughness is large. Focusing on two regions located over the Mid‐Atlantic Ridge and the East Pacific Rise, it is shown that regionally linear theory predicts an increase of the energy flux due to abyssal hills of up to 100% or 60% when an empirical correction for supercritical slopes is attempted. Therefore, abyssal hills, unresolved in state of the art topographic products, can have a strong impact on internal tide generation, especially over mid‐ocean ridges.","lang":"eng"}],"page":"6303-6318","article_type":"original","issue":"11","author":[{"full_name":"Melet, Angélique","first_name":"Angélique","last_name":"Melet"},{"full_name":"Nikurashin, Maxim","first_name":"Maxim","last_name":"Nikurashin"},{"first_name":"Caroline J","full_name":"Muller, Caroline J","orcid":"0000-0001-5836-5350","last_name":"Muller","id":"f978ccb0-3f7f-11eb-b193-b0e2bd13182b"},{"first_name":"S.","full_name":"Falahat, S.","last_name":"Falahat"},{"full_name":"Nycander, Jonas","first_name":"Jonas","last_name":"Nycander"},{"first_name":"Patrick G.","full_name":"Timko, Patrick G.","last_name":"Timko"},{"last_name":"Arbic","full_name":"Arbic, Brian K.","first_name":"Brian K."},{"last_name":"Goff","full_name":"Goff, John A.","first_name":"John A."}],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1002/2013JC009212"}],"publication_identifier":{"issn":["2169-9275"]},"intvolume":"       118","type":"journal_article","publisher":"American Geophysical Union","publication_status":"published","citation":{"ieee":"A. Melet <i>et al.</i>, “Internal tide generation by abyssal hills using analytical theory,” <i>Journal of Geophysical Research: Oceans</i>, vol. 118, no. 11. American Geophysical Union, pp. 6303–6318, 2013.","ama":"Melet A, Nikurashin M, Muller CJ, et al. Internal tide generation by abyssal hills using analytical theory. <i>Journal of Geophysical Research: Oceans</i>. 2013;118(11):6303-6318. doi:<a href=\"https://doi.org/10.1002/2013jc009212\">10.1002/2013jc009212</a>","apa":"Melet, A., Nikurashin, M., Muller, C. J., Falahat, S., Nycander, J., Timko, P. G., … Goff, J. A. (2013). Internal tide generation by abyssal hills using analytical theory. <i>Journal of Geophysical Research: Oceans</i>. American Geophysical Union. <a href=\"https://doi.org/10.1002/2013jc009212\">https://doi.org/10.1002/2013jc009212</a>","chicago":"Melet, Angélique, Maxim Nikurashin, Caroline J Muller, S. Falahat, Jonas Nycander, Patrick G. Timko, Brian K. Arbic, and John A. Goff. “Internal Tide Generation by Abyssal Hills Using Analytical Theory.” <i>Journal of Geophysical Research: Oceans</i>. American Geophysical Union, 2013. <a href=\"https://doi.org/10.1002/2013jc009212\">https://doi.org/10.1002/2013jc009212</a>.","mla":"Melet, Angélique, et al. “Internal Tide Generation by Abyssal Hills Using Analytical Theory.” <i>Journal of Geophysical Research: Oceans</i>, vol. 118, no. 11, American Geophysical Union, 2013, pp. 6303–18, doi:<a href=\"https://doi.org/10.1002/2013jc009212\">10.1002/2013jc009212</a>.","short":"A. Melet, M. Nikurashin, C.J. Muller, S. Falahat, J. Nycander, P.G. Timko, B.K. Arbic, J.A. Goff, Journal of Geophysical Research: Oceans 118 (2013) 6303–6318.","ista":"Melet A, Nikurashin M, Muller CJ, Falahat S, Nycander J, Timko PG, Arbic BK, Goff JA. 2013. Internal tide generation by abyssal hills using analytical theory. Journal of Geophysical Research: Oceans. 118(11), 6303–6318."},"date_created":"2021-02-15T15:11:39Z","date_published":"2013-11-07T00:00:00Z","_id":"9153","extern":"1","title":"Internal tide generation by abyssal hills using analytical theory"},{"_id":"9154","extern":"1","date_published":"2013-07-15T00:00:00Z","title":"Impact of convective organization on the response of tropical precipitation extremes to warming","publication_status":"published","citation":{"ista":"Muller CJ. 2013. Impact of convective organization on the response of tropical precipitation extremes to warming. Journal of Climate. 26(14), 5028–5043.","chicago":"Muller, Caroline J. “Impact of Convective Organization on the Response of Tropical Precipitation Extremes to Warming.” <i>Journal of Climate</i>. American Meteorological Society, 2013. <a href=\"https://doi.org/10.1175/jcli-d-12-00655.1\">https://doi.org/10.1175/jcli-d-12-00655.1</a>.","mla":"Muller, Caroline J. “Impact of Convective Organization on the Response of Tropical Precipitation Extremes to Warming.” <i>Journal of Climate</i>, vol. 26, no. 14, American Meteorological Society, 2013, pp. 5028–43, doi:<a href=\"https://doi.org/10.1175/jcli-d-12-00655.1\">10.1175/jcli-d-12-00655.1</a>.","short":"C.J. Muller, Journal of Climate 26 (2013) 5028–5043.","ieee":"C. J. Muller, “Impact of convective organization on the response of tropical precipitation extremes to warming,” <i>Journal of Climate</i>, vol. 26, no. 14. American Meteorological Society, pp. 5028–5043, 2013.","ama":"Muller CJ. Impact of convective organization on the response of tropical precipitation extremes to warming. <i>Journal of Climate</i>. 2013;26(14):5028-5043. doi:<a href=\"https://doi.org/10.1175/jcli-d-12-00655.1\">10.1175/jcli-d-12-00655.1</a>","apa":"Muller, C. J. (2013). Impact of convective organization on the response of tropical precipitation extremes to warming. <i>Journal of Climate</i>. American Meteorological Society. <a href=\"https://doi.org/10.1175/jcli-d-12-00655.1\">https://doi.org/10.1175/jcli-d-12-00655.1</a>"},"date_created":"2021-02-15T15:26:39Z","publisher":"American Meteorological Society","type":"journal_article","intvolume":"        26","publication_identifier":{"issn":["0894-8755","1520-0442"]},"issue":"14","author":[{"orcid":"0000-0001-5836-5350","first_name":"Caroline J","full_name":"Muller, Caroline J","last_name":"Muller","id":"f978ccb0-3f7f-11eb-b193-b0e2bd13182b"}],"main_file_link":[{"url":"https://doi.org/10.1175/JCLI-D-12-00655.1","open_access":"1"}],"date_updated":"2022-01-24T13:46:41Z","abstract":[{"text":"In this study the response of tropical precipitation extremes to warming in organized convection is examined using a cloud-resolving model. Vertical shear is imposed to organize the convection into squall lines. Earlier studies show that in disorganized convection, the fractional increase of precipitation extremes is similar to that of surface water vapor, which is substantially smaller than the increase in column water vapor. It has been suggested that organized convection could lead to stronger amplifications.\r\nRegardless of the strength of the shear, amplifications of precipitation extremes in the cloud-resolving simulations are comparable to those of surface water vapor and are substantially less than increases in column water vapor. The results without shear and with critical shear, for which the squall lines are perpendicular to the shear, are surprisingly similar with a fractional rate of increase of precipitation extremes slightly smaller than that of surface water vapor. Interestingly, the dependence on shear is nonmonotonic, and stronger supercritical shear yields larger rates, close to or slightly larger than surface humidity.\r\nA scaling is used to evaluate the thermodynamic and dynamic contributions to precipitation extreme changes. To first order, they are dominated by the thermodynamic component, which has the same magnitude for all shears, close to the change in surface water vapor. The dynamic contribution plays a secondary role and tends to weaken extremes without shear and with critical shear, while it strengthens extremes with supercritical shear. These different dynamic contributions for different shears are due to different responses of convective mass fluxes in individual updrafts to warming.","lang":"eng"}],"article_type":"original","page":"5028-5043","oa":1,"volume":26,"doi":"10.1175/jcli-d-12-00655.1","keyword":["Atmospheric Science"],"publication":"Journal of Climate","article_processing_charge":"No","language":[{"iso":"eng"}],"status":"public","year":"2013","month":"07","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","day":"15","oa_version":"Published Version","quality_controlled":"1"},{"publisher":"American Chemical Society","title":"Photoactivated colloidal dockers for cargo transportation","_id":"9167","extern":"1","date_published":"2013-10-30T00:00:00Z","citation":{"chicago":"Palacci, Jérémie A, Stefano Sacanna, Adrian Vatchinsky, Paul M. Chaikin, and David J. Pine. “Photoactivated Colloidal Dockers for Cargo Transportation.” <i>Journal of the American Chemical Society</i>. American Chemical Society, 2013. <a href=\"https://doi.org/10.1021/ja406090s\">https://doi.org/10.1021/ja406090s</a>.","mla":"Palacci, Jérémie A., et al. “Photoactivated Colloidal Dockers for Cargo Transportation.” <i>Journal of the American Chemical Society</i>, vol. 135, no. 43, American Chemical Society, 2013, pp. 15978–81, doi:<a href=\"https://doi.org/10.1021/ja406090s\">10.1021/ja406090s</a>.","short":"J.A. Palacci, S. Sacanna, A. Vatchinsky, P.M. Chaikin, D.J. Pine, Journal of the American Chemical Society 135 (2013) 15978–15981.","ieee":"J. A. Palacci, S. Sacanna, A. Vatchinsky, P. M. Chaikin, and D. J. Pine, “Photoactivated colloidal dockers for cargo transportation,” <i>Journal of the American Chemical Society</i>, vol. 135, no. 43. American Chemical Society, pp. 15978–15981, 2013.","ama":"Palacci JA, Sacanna S, Vatchinsky A, Chaikin PM, Pine DJ. Photoactivated colloidal dockers for cargo transportation. <i>Journal of the American Chemical Society</i>. 2013;135(43):15978-15981. doi:<a href=\"https://doi.org/10.1021/ja406090s\">10.1021/ja406090s</a>","apa":"Palacci, J. A., Sacanna, S., Vatchinsky, A., Chaikin, P. M., &#38; Pine, D. J. (2013). Photoactivated colloidal dockers for cargo transportation. <i>Journal of the American Chemical Society</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/ja406090s\">https://doi.org/10.1021/ja406090s</a>","ista":"Palacci JA, Sacanna S, Vatchinsky A, Chaikin PM, Pine DJ. 2013. Photoactivated colloidal dockers for cargo transportation. Journal of the American Chemical Society. 135(43), 15978–15981."},"publication_status":"published","date_created":"2021-02-18T14:31:26Z","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1310.5724"}],"author":[{"last_name":"Palacci","id":"8fb92548-2b22-11eb-b7c1-a3f0d08d7c7d","full_name":"Palacci, Jérémie A","first_name":"Jérémie A","orcid":"0000-0002-7253-9465"},{"full_name":"Sacanna, Stefano","first_name":"Stefano","last_name":"Sacanna"},{"last_name":"Vatchinsky","first_name":"Adrian","full_name":"Vatchinsky, Adrian"},{"full_name":"Chaikin, Paul M.","first_name":"Paul M.","last_name":"Chaikin"},{"last_name":"Pine","first_name":"David J.","full_name":"Pine, David J."}],"issue":"43","page":"15978-15981","article_type":"original","abstract":[{"text":"We introduce a self-propelled colloidal hematite docker that can be steered to a small particle cargo many times its size, dock, transport the cargo to a remote location, and then release it. The self-propulsion and docking are reversible and activated by visible light. The docker can be steered either by a weak uniform magnetic field or by nanoscale tracks in a textured substrate. The light-activated motion and docking originate from osmotic/phoretic particle transport in a concentration gradient of fuel, hydrogen peroxide, induced by the photocatalytic activity of the hematite. The docking mechanism is versatile and can be applied to various materials and shapes. The hematite dockers are simple single-component particles and are synthesized in bulk quantities. This system opens up new possibilities for designing complex micrometer-size factories as well as new biomimetic systems.","lang":"eng"}],"date_updated":"2021-02-22T10:10:41Z","type":"journal_article","intvolume":"       135","publication_identifier":{"eissn":["15205126"],"issn":["00027863"]},"doi":"10.1021/ja406090s","keyword":["Colloid and Surface Chemistry","Biochemistry","General Chemistry","Catalysis"],"publication":"Journal of the American Chemical Society","arxiv":1,"oa":1,"volume":135,"oa_version":"Preprint","scopus_import":"1","quality_controlled":"1","external_id":{"pmid":["24131488"],"arxiv":["1310.5724"]},"month":"10","article_processing_charge":"No","status":"public","language":[{"iso":"eng"}],"year":"2013","day":"30","pmid":1,"user_id":"D865714E-FA4E-11E9-B85B-F5C5E5697425"},{"volume":7,"oa":1,"doi":"10.3389/fncir.2013.00119","publication":"Frontiers in Neural Circuits","year":"2013","status":"public","language":[{"iso":"eng"}],"article_processing_charge":"No","month":"07","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","pmid":1,"day":"18","oa_version":"Published Version","has_accepted_license":"1","external_id":{"pmid":["23882186"]},"quality_controlled":"1","_id":"8030","date_published":"2013-07-18T00:00:00Z","extern":"1","title":"Inhibitory synaptic plasticity: Spike timing-dependence and putative network function","date_created":"2020-06-25T13:23:50Z","publication_status":"published","citation":{"ista":"Vogels TP, Froemke RC, Doyon N, Gilson M, Haas JS, Liu R, Maffei A, Miller P, Wierenga CJ, Woodin MA, Zenke F, Sprekeler H. 2013. Inhibitory synaptic plasticity: Spike timing-dependence and putative network function. Frontiers in Neural Circuits. 7, 119.","mla":"Vogels, Tim P., et al. “Inhibitory Synaptic Plasticity: Spike Timing-Dependence and Putative Network Function.” <i>Frontiers in Neural Circuits</i>, vol. 7, 119, Frontiers Media, 2013, doi:<a href=\"https://doi.org/10.3389/fncir.2013.00119\">10.3389/fncir.2013.00119</a>.","chicago":"Vogels, Tim P, R. C. Froemke, N. Doyon, M. Gilson, J. S. Haas, R. Liu, A. Maffei, et al. “Inhibitory Synaptic Plasticity: Spike Timing-Dependence and Putative Network Function.” <i>Frontiers in Neural Circuits</i>. Frontiers Media, 2013. <a href=\"https://doi.org/10.3389/fncir.2013.00119\">https://doi.org/10.3389/fncir.2013.00119</a>.","short":"T.P. Vogels, R.C. Froemke, N. Doyon, M. Gilson, J.S. Haas, R. Liu, A. Maffei, P. Miller, C.J. Wierenga, M.A. Woodin, F. Zenke, H. Sprekeler, Frontiers in Neural Circuits 7 (2013).","ieee":"T. P. Vogels <i>et al.</i>, “Inhibitory synaptic plasticity: Spike timing-dependence and putative network function,” <i>Frontiers in Neural Circuits</i>, vol. 7. Frontiers Media, 2013.","ama":"Vogels TP, Froemke RC, Doyon N, et al. Inhibitory synaptic plasticity: Spike timing-dependence and putative network function. <i>Frontiers in Neural Circuits</i>. 2013;7. doi:<a href=\"https://doi.org/10.3389/fncir.2013.00119\">10.3389/fncir.2013.00119</a>","apa":"Vogels, T. P., Froemke, R. C., Doyon, N., Gilson, M., Haas, J. S., Liu, R., … Sprekeler, H. (2013). Inhibitory synaptic plasticity: Spike timing-dependence and putative network function. <i>Frontiers in Neural Circuits</i>. Frontiers Media. <a href=\"https://doi.org/10.3389/fncir.2013.00119\">https://doi.org/10.3389/fncir.2013.00119</a>"},"publisher":"Frontiers Media","file":[{"creator":"cziletti","file_id":"8123","file_size":1530469,"success":1,"relation":"main_file","access_level":"open_access","checksum":"9c321cb12977d84048712eefa7f0c497","date_updated":"2020-07-16T11:23:40Z","content_type":"application/pdf","date_created":"2020-07-16T11:23:40Z","file_name":"2013_FrontNeurCirc_Vogels.pdf"}],"tmp":{"name":"Creative Commons Attribution 3.0 Unported (CC BY 3.0)","image":"/images/cc_by.png","short":"CC BY (3.0)","legal_code_url":"https://creativecommons.org/licenses/by/3.0/legalcode"},"intvolume":"         7","type":"journal_article","publication_identifier":{"eissn":["1662-5110"]},"ddc":["570"],"file_date_updated":"2020-07-16T11:23:40Z","author":[{"full_name":"Vogels, Tim P","first_name":"Tim P","orcid":"0000-0003-3295-6181","last_name":"Vogels","id":"CB6FF8D2-008F-11EA-8E08-2637E6697425"},{"last_name":"Froemke","full_name":"Froemke, R. C.","first_name":"R. C."},{"last_name":"Doyon","first_name":"N.","full_name":"Doyon, N."},{"full_name":"Gilson, M.","first_name":"M.","last_name":"Gilson"},{"last_name":"Haas","first_name":"J. S.","full_name":"Haas, J. S."},{"first_name":"R.","full_name":"Liu, R.","last_name":"Liu"},{"full_name":"Maffei, A.","first_name":"A.","last_name":"Maffei"},{"last_name":"Miller","first_name":"P.","full_name":"Miller, P."},{"full_name":"Wierenga, C. J.","first_name":"C. J.","last_name":"Wierenga"},{"last_name":"Woodin","first_name":"M. A.","full_name":"Woodin, M. A."},{"full_name":"Zenke, F.","first_name":"F.","last_name":"Zenke"},{"last_name":"Sprekeler","full_name":"Sprekeler, H.","first_name":"H."}],"date_updated":"2021-01-12T08:16:38Z","abstract":[{"text":"While the plasticity of excitatory synaptic connections in the brain has been widely studied, the plasticity of inhibitory connections is much less understood. Here, we present recent experimental and theoretical findings concerning the rules of spike timing-dependent inhibitory plasticity and their putative network function. This is a summary of a workshop at the COSYNE conference 2012.","lang":"eng"}],"article_number":"119","article_type":"original"},{"date_created":"2018-12-11T11:53:51Z","citation":{"short":"N. Ares, V. Golovach, G. Katsaros, M. Stoffel, F. Fournel, L. Glazman, O. Schmidt, S. De Franceschi, Physical Review Letters 110 (2013).","mla":"Ares, Natalia, et al. “Nature of Tunable Hole g Factors in Quantum Dots.” <i>Physical Review Letters</i>, vol. 110, no. 4, American Physical Society, 2013, doi:<a href=\"https://doi.org/10.1103/PhysRevLett.110.046602\">10.1103/PhysRevLett.110.046602</a>.","chicago":"Ares, Natalia, Vitaly Golovach, Georgios Katsaros, Mathieu Stoffel, Frank Fournel, Leonid Glazman, Oliver Schmidt, and Silvano De Franceschi. “Nature of Tunable Hole g Factors in Quantum Dots.” <i>Physical Review Letters</i>. American Physical Society, 2013. <a href=\"https://doi.org/10.1103/PhysRevLett.110.046602\">https://doi.org/10.1103/PhysRevLett.110.046602</a>.","apa":"Ares, N., Golovach, V., Katsaros, G., Stoffel, M., Fournel, F., Glazman, L., … De Franceschi, S. (2013). Nature of tunable hole g factors in quantum dots. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevLett.110.046602\">https://doi.org/10.1103/PhysRevLett.110.046602</a>","ieee":"N. Ares <i>et al.</i>, “Nature of tunable hole g factors in quantum dots,” <i>Physical Review Letters</i>, vol. 110, no. 4. American Physical Society, 2013.","ama":"Ares N, Golovach V, Katsaros G, et al. Nature of tunable hole g factors in quantum dots. <i>Physical Review Letters</i>. 2013;110(4). doi:<a href=\"https://doi.org/10.1103/PhysRevLett.110.046602\">10.1103/PhysRevLett.110.046602</a>","ista":"Ares N, Golovach V, Katsaros G, Stoffel M, Fournel F, Glazman L, Schmidt O, De Franceschi S. 2013. Nature of tunable hole g factors in quantum dots. Physical Review Letters. 110(4)."},"publication_status":"published","title":"Nature of tunable hole g factors in quantum dots","volume":110,"oa":1,"_id":"1759","extern":1,"date_published":"2013-01-23T00:00:00Z","publication":"Physical Review Letters","doi":"10.1103/PhysRevLett.110.046602","publisher":"American Physical Society","day":"23","publist_id":"5365","month":"01","status":"public","year":"2013","type":"journal_article","intvolume":"       110","quality_controlled":0,"abstract":[{"text":"We report an electric-field-induced giant modulation of the hole g factor in SiGe nanocrystals. The observed effect is ascribed to a so-far overlooked contribution to the g factor that stems from the mixing between heavy- and light-hole wave functions. We show that the relative displacement between the confined heavy- and light-hole states, occurring upon application of the electric field, alters their mixing strength leading to a strong nonmonotonic modulation of the g factor.","lang":"eng"}],"date_updated":"2021-01-12T06:53:01Z","author":[{"last_name":"Ares","full_name":"Ares, Natalia","first_name":"Natalia"},{"first_name":"Vitaly","full_name":"Golovach, Vitaly N","last_name":"Golovach"},{"full_name":"Georgios Katsaros","first_name":"Georgios","last_name":"Katsaros","id":"38DB5788-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Stoffel, Mathieu","first_name":"Mathieu","last_name":"Stoffel"},{"last_name":"Fournel","first_name":"Frank","full_name":"Fournel, Frank"},{"full_name":"Glazman, Leonid I","first_name":"Leonid","last_name":"Glazman"},{"full_name":"Schmidt, Oliver G","first_name":"Oliver","last_name":"Schmidt"},{"first_name":"Silvano","full_name":"De Franceschi, Silvano","last_name":"De Franceschi"}],"main_file_link":[{"url":"http://arxiv.org/abs/1208.0476","open_access":"1"}],"acknowledgement":"We acknowledge financial support from the Nanosciences Foundation (Grenoble, France), DOE under Contract No. DEFG02-08ER46482 (Yale), the Agence Nationale de la Recherche, and the European Starting Grant. G. K. acknowledges support from the European Commission via a Marie Curie Carrer Integration Grant and the FWF for a Lise-Meitner Fellowship","issue":"4"},{"month":"01","intvolume":"       103","status":"public","type":"journal_article","year":"2013","day":"23","publist_id":"5364","main_file_link":[{"open_access":"1","url":"http://arxiv.org/abs/1307.7196"}],"author":[{"first_name":"Natalia","full_name":"Ares, Natalia","last_name":"Ares"},{"last_name":"Katsaros","id":"38DB5788-F248-11E8-B48F-1D18A9856A87","full_name":"Georgios Katsaros","first_name":"Georgios"},{"full_name":"Golovach, Vitaly N","first_name":"Vitaly","last_name":"Golovach"},{"last_name":"Zhang","first_name":"Jianjun","full_name":"Zhang, Jianjun"},{"full_name":"Prager, Aaron A","first_name":"Aaron","last_name":"Prager"},{"last_name":"Glazman","full_name":"Glazman, Leonid I","first_name":"Leonid"},{"last_name":"Schmidt","first_name":"Oliver","full_name":"Schmidt, Oliver G"},{"full_name":"De Franceschi, Silvano","first_name":"Silvano","last_name":"De Franceschi"}],"acknowledgement":"We acknowledge the financial support from the Nanosciences Foundation (Grenoble, France), the Commission for a Marie Curie Carrer Integration Grant, the Austrian Science Fund (FWF) for a Lise-Meitner Fellowship (M1435-N30), the DOE under Contract No. DE-FG02-08ER46482 (Yale), the European Starting Grant program, and the Agence Nationale de la Recherche","issue":"26","quality_controlled":0,"abstract":[{"lang":"eng","text":"We report on hole g-factor measurements in three terminal SiGe self-assembled quantum dot devices with a top gate electrode positioned very close to the nanostructure. Measurements of both the perpendicular as well as the parallel g-factor reveal significant changes for a small modulation of the top gate voltage. From the observed modulations, we estimate that, for realistic experimental conditions, hole spins can be electrically manipulated with Rabi frequencies in the order of 100 MHz. This work emphasises the potential of hole-based nano-devices for efficient spin manipulation by means of the g-tensor modulation technique."}],"date_updated":"2021-01-12T06:53:02Z","title":"SiGe quantum dots for fast hole spin Rabi oscillations","volume":103,"oa":1,"date_published":"2013-01-23T00:00:00Z","_id":"1760","extern":1,"date_created":"2018-12-11T11:53:52Z","publication_status":"published","citation":{"chicago":"Ares, Natalia, Georgios Katsaros, Vitaly Golovach, Jianjun Zhang, Aaron Prager, Leonid Glazman, Oliver Schmidt, and Silvano De Franceschi. “SiGe Quantum Dots for Fast Hole Spin Rabi Oscillations.” <i>Applied Physics Letters</i>. American Institute of Physics, 2013. <a href=\"https://doi.org/10.1063/1.4858959\">https://doi.org/10.1063/1.4858959</a>.","mla":"Ares, Natalia, et al. “SiGe Quantum Dots for Fast Hole Spin Rabi Oscillations.” <i>Applied Physics Letters</i>, vol. 103, no. 26, American Institute of Physics, 2013, doi:<a href=\"https://doi.org/10.1063/1.4858959\">10.1063/1.4858959</a>.","short":"N. Ares, G. Katsaros, V. Golovach, J. Zhang, A. Prager, L. Glazman, O. Schmidt, S. De Franceschi, Applied Physics Letters 103 (2013).","ieee":"N. Ares <i>et al.</i>, “SiGe quantum dots for fast hole spin Rabi oscillations,” <i>Applied Physics Letters</i>, vol. 103, no. 26. American Institute of Physics, 2013.","ama":"Ares N, Katsaros G, Golovach V, et al. SiGe quantum dots for fast hole spin Rabi oscillations. <i>Applied Physics Letters</i>. 2013;103(26). doi:<a href=\"https://doi.org/10.1063/1.4858959\">10.1063/1.4858959</a>","apa":"Ares, N., Katsaros, G., Golovach, V., Zhang, J., Prager, A., Glazman, L., … De Franceschi, S. (2013). SiGe quantum dots for fast hole spin Rabi oscillations. <i>Applied Physics Letters</i>. American Institute of Physics. <a href=\"https://doi.org/10.1063/1.4858959\">https://doi.org/10.1063/1.4858959</a>","ista":"Ares N, Katsaros G, Golovach V, Zhang J, Prager A, Glazman L, Schmidt O, De Franceschi S. 2013. SiGe quantum dots for fast hole spin Rabi oscillations. Applied Physics Letters. 103(26)."},"publisher":"American Institute of Physics","doi":"10.1063/1.4858959","publication":"Applied Physics Letters"},{"abstract":[{"lang":"eng","text":"We report the experimental observation and a theoretical explanation of collective suppression of linewidths for multiple superconducting qubits coupled to a good cavity. This demonstrates how strong qubit-cavity coupling can significantly modify the dephasing and dissipation processes that might be expected for individual qubits, and can potentially improve coherence times in many-body circuit QED."}],"quality_controlled":0,"date_updated":"2021-01-12T06:53:11Z","acknowledgement":"J. K. acknowledges financial support from EPSRC program “TOPNES” (EP/I031014/1) and EPSRC (EP/G004714/2)","main_file_link":[{"url":"http://arxiv.org/abs/1302.0665","open_access":"1"}],"author":[{"last_name":"Nissen","full_name":"Nissen, Felix","first_name":"Felix"},{"full_name":"Johannes Fink","first_name":"Johannes M","orcid":"0000-0001-8112-028X","id":"4B591CBA-F248-11E8-B48F-1D18A9856A87","last_name":"Fink"},{"first_name":"Jonas","full_name":"Mlynek, Jonas A","last_name":"Mlynek"},{"last_name":"Wallraff","full_name":"Wallraff, Andreas","first_name":"Andreas"},{"full_name":"Keeling, Jonathan M","first_name":"Jonathan","last_name":"Keeling"}],"issue":"20","day":"15","publist_id":"5328","month":"05","year":"2013","type":"journal_article","status":"public","intvolume":"       110","publication":"Physical Review Letters","publisher":"American Physical Society","doi":"10.1103/PhysRevLett.110.203602","citation":{"mla":"Nissen, Felix, et al. “Collective Suppression of Linewidths in Circuit QED.” <i>Physical Review Letters</i>, vol. 110, no. 20, American Physical Society, 2013, doi:<a href=\"https://doi.org/10.1103/PhysRevLett.110.203602\">10.1103/PhysRevLett.110.203602</a>.","chicago":"Nissen, Felix, Johannes M Fink, Jonas Mlynek, Andreas Wallraff, and Jonathan Keeling. “Collective Suppression of Linewidths in Circuit QED.” <i>Physical Review Letters</i>. American Physical Society, 2013. <a href=\"https://doi.org/10.1103/PhysRevLett.110.203602\">https://doi.org/10.1103/PhysRevLett.110.203602</a>.","short":"F. Nissen, J.M. Fink, J. Mlynek, A. Wallraff, J. Keeling, Physical Review Letters 110 (2013).","ama":"Nissen F, Fink JM, Mlynek J, Wallraff A, Keeling J. Collective suppression of linewidths in circuit QED. <i>Physical Review Letters</i>. 2013;110(20). doi:<a href=\"https://doi.org/10.1103/PhysRevLett.110.203602\">10.1103/PhysRevLett.110.203602</a>","ieee":"F. Nissen, J. M. Fink, J. Mlynek, A. Wallraff, and J. Keeling, “Collective suppression of linewidths in circuit QED,” <i>Physical Review Letters</i>, vol. 110, no. 20. American Physical Society, 2013.","apa":"Nissen, F., Fink, J. M., Mlynek, J., Wallraff, A., &#38; Keeling, J. (2013). Collective suppression of linewidths in circuit QED. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevLett.110.203602\">https://doi.org/10.1103/PhysRevLett.110.203602</a>","ista":"Nissen F, Fink JM, Mlynek J, Wallraff A, Keeling J. 2013. Collective suppression of linewidths in circuit QED. Physical Review Letters. 110(20)."},"publication_status":"published","date_created":"2018-12-11T11:54:00Z","oa":1,"volume":110,"title":"Collective suppression of linewidths in circuit QED","_id":"1786","extern":1,"date_published":"2013-05-15T00:00:00Z"},{"publication":"Proceedings of 25th Int. Conf. on Computer Aided Verification","arxiv":1,"doi":"10.1007/978-3-642-39799-8_6","project":[{"name":"Quantitative Graph Games: Theory and Applications","_id":"2581B60A-B435-11E9-9278-68D0E5697425","grant_number":"279307","call_identifier":"FP7"},{"_id":"25832EC2-B435-11E9-9278-68D0E5697425","name":"Rigorous Systems Engineering","call_identifier":"FWF","grant_number":"S 11407_N23"},{"call_identifier":"FWF","grant_number":"P 23499-N23","_id":"2584A770-B435-11E9-9278-68D0E5697425","name":"Modern Graph Algorithmic Techniques in Formal Verification"},{"name":"Microsoft Research Faculty Fellowship","_id":"2587B514-B435-11E9-9278-68D0E5697425"}],"oa":1,"volume":8044,"quality_controlled":"1","external_id":{"arxiv":["1303.5251"]},"series_title":"Lecture Notes in Computer Science","oa_version":"Preprint","related_material":{"record":[{"relation":"earlier_version","id":"5399","status":"public"},{"relation":"dissertation_contains","id":"1400","status":"public"}]},"scopus_import":1,"day":"01","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","alternative_title":["LNCS"],"publist_id":"5077","month":"01","language":[{"iso":"eng"}],"status":"public","year":"2013","publisher":"Springer","department":[{"_id":"KrCh"}],"citation":{"mla":"Reiter, Johannes, et al. “TTP: Tool for Tumor Progression.” <i>Proceedings of 25th Int. Conf. on Computer Aided Verification</i>, vol. 8044, Springer, 2013, pp. 101–06, doi:<a href=\"https://doi.org/10.1007/978-3-642-39799-8_6\">10.1007/978-3-642-39799-8_6</a>.","chicago":"Reiter, Johannes, Ivana Božić, Krishnendu Chatterjee, and Martin Nowak. “TTP: Tool for Tumor Progression.” In <i>Proceedings of 25th Int. Conf. on Computer Aided Verification</i>, 8044:101–6. Lecture Notes in Computer Science. Springer, 2013. <a href=\"https://doi.org/10.1007/978-3-642-39799-8_6\">https://doi.org/10.1007/978-3-642-39799-8_6</a>.","short":"J. Reiter, I. Božić, K. Chatterjee, M. Nowak, in:, Proceedings of 25th Int. Conf. on Computer Aided Verification, Springer, 2013, pp. 101–106.","ieee":"J. Reiter, I. Božić, K. Chatterjee, and M. Nowak, “TTP: Tool for tumor progression,” in <i>Proceedings of 25th Int. Conf. on Computer Aided Verification</i>, St. Petersburg, Russia, 2013, vol. 8044, pp. 101–106.","ama":"Reiter J, Božić I, Chatterjee K, Nowak M. TTP: Tool for tumor progression. In: <i>Proceedings of 25th Int. Conf. on Computer Aided Verification</i>. Vol 8044. Lecture Notes in Computer Science. Springer; 2013:101-106. doi:<a href=\"https://doi.org/10.1007/978-3-642-39799-8_6\">10.1007/978-3-642-39799-8_6</a>","apa":"Reiter, J., Božić, I., Chatterjee, K., &#38; Nowak, M. (2013). TTP: Tool for tumor progression. In <i>Proceedings of 25th Int. Conf. on Computer Aided Verification</i> (Vol. 8044, pp. 101–106). St. Petersburg, Russia: Springer. <a href=\"https://doi.org/10.1007/978-3-642-39799-8_6\">https://doi.org/10.1007/978-3-642-39799-8_6</a>","ista":"Reiter J, Božić I, Chatterjee K, Nowak M. 2013. TTP: Tool for tumor progression. Proceedings of 25th Int. Conf. on Computer Aided Verification. CAV: Computer Aided VerificationLecture Notes in Computer Science, LNCS, vol. 8044, 101–106."},"publication_status":"published","date_created":"2018-12-11T11:55:08Z","title":"TTP: Tool for tumor progression","ec_funded":1,"_id":"2000","date_published":"2013-01-01T00:00:00Z","conference":{"location":"St. Petersburg, Russia","name":"CAV: Computer Aided Verification","end_date":"2013-07-19","start_date":"2013-07-13"},"abstract":[{"lang":"eng","text":"In this work we present a flexible tool for tumor progression, which simulates the evolutionary dynamics of cancer. Tumor progression implements a multi-type branching process where the key parameters are the fitness landscape, the mutation rate, and the average time of cell division. The fitness of a cancer cell depends on the mutations it has accumulated. The input to our tool could be any fitness landscape, mutation rate, and cell division time, and the tool produces the growth dynamics and all relevant statistics."}],"page":"101 - 106","date_updated":"2023-09-07T11:40:43Z","main_file_link":[{"url":"https://arxiv.org/abs/1303.5251","open_access":"1"}],"author":[{"id":"4A918E98-F248-11E8-B48F-1D18A9856A87","last_name":"Reiter","orcid":"0000-0002-0170-7353","first_name":"Johannes","full_name":"Reiter, Johannes"},{"full_name":"Božić, Ivana","first_name":"Ivana","last_name":"Božić"},{"last_name":"Chatterjee","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","full_name":"Chatterjee, Krishnendu","first_name":"Krishnendu","orcid":"0000-0002-4561-241X"},{"last_name":"Nowak","first_name":"Martin","full_name":"Nowak, Martin"}],"type":"conference","intvolume":"      8044"},{"publication":"Journal of Privacy and Confidentiality ","department":[{"_id":"CaUh"}],"publisher":"Carnegie Mellon University","doi":"10.29012/jpc.v5i1.629","date_created":"2018-12-11T11:55:11Z","publication_status":"published","citation":{"ista":"Uhler C, Slavkovic A, Fienberg S. 2013. Privacy-preserving data sharing for genome-wide association studies. Journal of Privacy and Confidentiality . 5(1), 137–166.","apa":"Uhler, C., Slavkovic, A., &#38; Fienberg, S. (2013). Privacy-preserving data sharing for genome-wide association studies. <i>Journal of Privacy and Confidentiality </i>. Carnegie Mellon University. <a href=\"https://doi.org/10.29012/jpc.v5i1.629\">https://doi.org/10.29012/jpc.v5i1.629</a>","ieee":"C. Uhler, A. Slavkovic, and S. Fienberg, “Privacy-preserving data sharing for genome-wide association studies,” <i>Journal of Privacy and Confidentiality </i>, vol. 5, no. 1. Carnegie Mellon University, pp. 137–166, 2013.","ama":"Uhler C, Slavkovic A, Fienberg S. Privacy-preserving data sharing for genome-wide association studies. <i>Journal of Privacy and Confidentiality </i>. 2013;5(1):137-166. doi:<a href=\"https://doi.org/10.29012/jpc.v5i1.629\">10.29012/jpc.v5i1.629</a>","short":"C. Uhler, A. Slavkovic, S. Fienberg, Journal of Privacy and Confidentiality  5 (2013) 137–166.","chicago":"Uhler, Caroline, Aleksandra Slavkovic, and Stephen Fienberg. “Privacy-Preserving Data Sharing for Genome-Wide Association Studies.” <i>Journal of Privacy and Confidentiality </i>. Carnegie Mellon University, 2013. <a href=\"https://doi.org/10.29012/jpc.v5i1.629\">https://doi.org/10.29012/jpc.v5i1.629</a>.","mla":"Uhler, Caroline, et al. “Privacy-Preserving Data Sharing for Genome-Wide Association Studies.” <i>Journal of Privacy and Confidentiality </i>, vol. 5, no. 1, Carnegie Mellon University, 2013, pp. 137–66, doi:<a href=\"https://doi.org/10.29012/jpc.v5i1.629\">10.29012/jpc.v5i1.629</a>."},"title":"Privacy-preserving data sharing for genome-wide association studies","volume":5,"oa":1,"date_published":"2013-08-01T00:00:00Z","_id":"2009","page":"137 - 166","quality_controlled":"1","abstract":[{"text":"Traditional statistical methods for confidentiality protection of statistical databases do not scale well to deal with GWAS databases especially in terms of guarantees regarding protection from linkage to external information. The more recent concept of differential privacy, introduced by the cryptographic community, is an approach which provides a rigorous definition of privacy with meaningful privacy guarantees in the presence of arbitrary external information, although the guarantees may come at a serious price in terms of data utility. Building on such notions, we propose new methods to release aggregate GWAS data without compromising an individual’s privacy. We present methods for releasing differentially private minor allele frequencies, chi-square statistics and p-values. We compare these approaches on simulated data and on a GWAS study of canine hair length involving 685 dogs. We also propose a privacy-preserving method for finding genome-wide associations based on a differentially-private approach to penalized logistic regression.","lang":"eng"}],"date_updated":"2021-01-12T06:54:41Z","author":[{"id":"49ADD78E-F248-11E8-B48F-1D18A9856A87","last_name":"Uhler","orcid":"0000-0002-7008-0216","full_name":"Uhler, Caroline","first_name":"Caroline"},{"full_name":"Slavkovic, Aleksandra","first_name":"Aleksandra","last_name":"Slavkovic"},{"full_name":"Fienberg, Stephen","first_name":"Stephen","last_name":"Fienberg"}],"oa_version":"Published Version","main_file_link":[{"open_access":"1","url":"http://repository.cmu.edu/jpc/vol5/iss1/6"}],"issue":"1","day":"01","publist_id":"5067","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","month":"08","year":"2013","type":"journal_article","language":[{"iso":"eng"}],"status":"public","intvolume":"         5","article_processing_charge":"No"},{"intvolume":"        41","type":"journal_article","issue":"2","main_file_link":[{"url":"www.doi.org/10.1214/12-AOS1080","open_access":"1"}],"author":[{"orcid":"0000-0002-7008-0216","full_name":"Uhler, Caroline","first_name":"Caroline","last_name":"Uhler","id":"49ADD78E-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Garvesh","full_name":"Raskutti, Garvesh","last_name":"Raskutti"},{"full_name":"Bühlmann, Peter","first_name":"Peter","last_name":"Bühlmann"},{"first_name":"Bin","full_name":"Yu, Bin","last_name":"Yu"}],"date_updated":"2021-01-12T06:54:42Z","abstract":[{"text":"Many algorithms for inferring causality rely heavily on the faithfulness assumption. The main justification for imposing this assumption is that the set of unfaithful distributions has Lebesgue measure zero, since it can be seen as a collection of hypersurfaces in a hypercube. However, due to sampling error the faithfulness condition alone is not sufficient for statistical estimation, and strong-faithfulness has been proposed and assumed to achieve uniform or high-dimensional consistency. In contrast to the plain faithfulness assumption, the set of distributions that is not strong-faithful has nonzero Lebesgue measure and in fact, can be surprisingly large as we show in this paper. We study the strong-faithfulness condition from a geometric and combinatorial point of view and give upper and lower bounds on the Lebesgue measure of strong-faithful distributions for various classes of directed acyclic graphs. Our results imply fundamental limitations for the PC-algorithm and potentially also for other algorithms based on partial correlation testing in the Gaussian case.","lang":"eng"}],"page":"436 - 463","date_published":"2013-04-01T00:00:00Z","_id":"2010","title":"Geometry of the faithfulness assumption in causal inference","citation":{"apa":"Uhler, C., Raskutti, G., Bühlmann, P., &#38; Yu, B. (2013). Geometry of the faithfulness assumption in causal inference. <i>The Annals of Statistics</i>. Institute of Mathematical Statistics. <a href=\"https://doi.org/10.1214/12-AOS1080\">https://doi.org/10.1214/12-AOS1080</a>","ama":"Uhler C, Raskutti G, Bühlmann P, Yu B. Geometry of the faithfulness assumption in causal inference. <i>The Annals of Statistics</i>. 2013;41(2):436-463. doi:<a href=\"https://doi.org/10.1214/12-AOS1080\">10.1214/12-AOS1080</a>","ieee":"C. Uhler, G. Raskutti, P. Bühlmann, and B. Yu, “Geometry of the faithfulness assumption in causal inference,” <i>The Annals of Statistics</i>, vol. 41, no. 2. Institute of Mathematical Statistics, pp. 436–463, 2013.","short":"C. Uhler, G. Raskutti, P. Bühlmann, B. Yu, The Annals of Statistics 41 (2013) 436–463.","chicago":"Uhler, Caroline, Garvesh Raskutti, Peter Bühlmann, and Bin Yu. “Geometry of the Faithfulness Assumption in Causal Inference.” <i>The Annals of Statistics</i>. Institute of Mathematical Statistics, 2013. <a href=\"https://doi.org/10.1214/12-AOS1080\">https://doi.org/10.1214/12-AOS1080</a>.","mla":"Uhler, Caroline, et al. “Geometry of the Faithfulness Assumption in Causal Inference.” <i>The Annals of Statistics</i>, vol. 41, no. 2, Institute of Mathematical Statistics, 2013, pp. 436–63, doi:<a href=\"https://doi.org/10.1214/12-AOS1080\">10.1214/12-AOS1080</a>.","ista":"Uhler C, Raskutti G, Bühlmann P, Yu B. 2013. Geometry of the faithfulness assumption in causal inference. The Annals of Statistics. 41(2), 436–463."},"publication_status":"published","date_created":"2018-12-11T11:55:11Z","publisher":"Institute of Mathematical Statistics","department":[{"_id":"CaUh"}],"status":"public","language":[{"iso":"eng"}],"year":"2013","month":"04","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publist_id":"5066","day":"01","scopus_import":1,"oa_version":"Published Version","external_id":{"arxiv":["1207.0547"]},"quality_controlled":"1","oa":1,"volume":41,"doi":"10.1214/12-AOS1080","publication":"The Annals of Statistics","arxiv":1},{"month":"09","status":"public","language":[{"iso":"eng"}],"year":"2013","day":"01","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","alternative_title":["LIPIcs"],"publist_id":"5837","pubrep_id":"624","oa_version":"Published Version","scopus_import":1,"quality_controlled":"1","series_title":"Leibniz International Proceedings in Informatics","has_accepted_license":"1","oa":1,"volume":23,"doi":"10.4230/LIPIcs.CSL.2013.181","project":[{"_id":"2584A770-B435-11E9-9278-68D0E5697425","name":"Modern Graph Algorithmic Techniques in Formal Verification","call_identifier":"FWF","grant_number":"P 23499-N23"},{"grant_number":"S11407","call_identifier":"FWF","name":"Game Theory","_id":"25863FF4-B435-11E9-9278-68D0E5697425"},{"name":"Quantitative Graph Games: Theory and Applications","_id":"2581B60A-B435-11E9-9278-68D0E5697425","grant_number":"279307","call_identifier":"FP7"},{"_id":"2587B514-B435-11E9-9278-68D0E5697425","name":"Microsoft Research Faculty Fellowship"}],"publication":"22nd EACSL Annual Conference on Computer Science Logic","intvolume":"        23","type":"conference","ddc":["000"],"author":[{"last_name":"Chatterjee","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","first_name":"Krishnendu","full_name":"Chatterjee, Krishnendu","orcid":"0000-0002-4561-241X"},{"last_name":"Fijalkow","first_name":"Nathanaël","full_name":"Fijalkow, Nathanaël"}],"file_date_updated":"2020-07-14T12:44:47Z","conference":{"name":"CSL: Computer Science Logic","location":"Torino, Italy","end_date":"2013-09-05","start_date":"203-09-02"},"abstract":[{"text":"We study two-player zero-sum games over infinite-state graphs equipped with ωB and finitary conditions. Our first contribution is about the strategy complexity, i.e the memory required for winning strategies: we prove that over general infinite-state graphs, memoryless strategies are sufficient for finitary Büchi, and finite-memory suffices for finitary parity games. We then study pushdown games with boundedness conditions, with two contributions. First we prove a collapse result for pushdown games with ωB-conditions, implying the decidability of solving these games. Second we consider pushdown games with finitary parity along with stack boundedness conditions, and show that solving these games is EXPTIME-complete.","lang":"eng"}],"page":"181 - 196","date_updated":"2021-01-12T06:50:14Z","ec_funded":1,"title":"Infinite-state games with finitary conditions","date_published":"2013-09-01T00:00:00Z","_id":"1374","citation":{"ista":"Chatterjee K, Fijalkow N. 2013. Infinite-state games with finitary conditions. 22nd EACSL Annual Conference on Computer Science Logic. CSL: Computer Science LogicLeibniz International Proceedings in Informatics, LIPIcs, vol. 23, 181–196.","apa":"Chatterjee, K., &#38; Fijalkow, N. (2013). Infinite-state games with finitary conditions. In <i>22nd EACSL Annual Conference on Computer Science Logic</i> (Vol. 23, pp. 181–196). Torino, Italy: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.CSL.2013.181\">https://doi.org/10.4230/LIPIcs.CSL.2013.181</a>","ieee":"K. Chatterjee and N. Fijalkow, “Infinite-state games with finitary conditions,” in <i>22nd EACSL Annual Conference on Computer Science Logic</i>, Torino, Italy, 2013, vol. 23, pp. 181–196.","ama":"Chatterjee K, Fijalkow N. Infinite-state games with finitary conditions. In: <i>22nd EACSL Annual Conference on Computer Science Logic</i>. Vol 23. Leibniz International Proceedings in Informatics. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2013:181-196. doi:<a href=\"https://doi.org/10.4230/LIPIcs.CSL.2013.181\">10.4230/LIPIcs.CSL.2013.181</a>","short":"K. Chatterjee, N. Fijalkow, in:, 22nd EACSL Annual Conference on Computer Science Logic, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2013, pp. 181–196.","mla":"Chatterjee, Krishnendu, and Nathanaël Fijalkow. “Infinite-State Games with Finitary Conditions.” <i>22nd EACSL Annual Conference on Computer Science Logic</i>, vol. 23, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2013, pp. 181–96, doi:<a href=\"https://doi.org/10.4230/LIPIcs.CSL.2013.181\">10.4230/LIPIcs.CSL.2013.181</a>.","chicago":"Chatterjee, Krishnendu, and Nathanaël Fijalkow. “Infinite-State Games with Finitary Conditions.” In <i>22nd EACSL Annual Conference on Computer Science Logic</i>, 23:181–96. Leibniz International Proceedings in Informatics. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2013. <a href=\"https://doi.org/10.4230/LIPIcs.CSL.2013.181\">https://doi.org/10.4230/LIPIcs.CSL.2013.181</a>."},"publication_status":"published","date_created":"2018-12-11T11:51:39Z","publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","department":[{"_id":"KrCh"}],"tmp":{"image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"file":[{"date_updated":"2020-07-14T12:44:47Z","checksum":"b7091a3866db573c0db5ec486952255e","relation":"main_file","access_level":"open_access","creator":"system","file_size":547296,"file_id":"5023","file_name":"IST-2016-624-v1+1_ChKr_Infinite-state_games_2013_17.pdf","date_created":"2018-12-12T10:13:38Z","content_type":"application/pdf"}]},{"acknowledgement":"This research was supported by the European Commission through project\r\nDIAMOND  (FP7-2009-IST-4-248613), and  QUAINT  (I774-N23),  ","author":[{"last_name":"Hofferek","full_name":"Hofferek, Georg","first_name":"Georg"},{"id":"335E5684-F248-11E8-B48F-1D18A9856A87","last_name":"Gupta","full_name":"Gupta, Ashutosh","first_name":"Ashutosh"},{"first_name":"Bettina","full_name":"Könighofer, Bettina","last_name":"Könighofer"},{"full_name":"Jiang, Jie","first_name":"Jie","last_name":"Jiang"},{"last_name":"Bloem","full_name":"Bloem, Roderick","first_name":"Roderick"}],"main_file_link":[{"open_access":"1","url":"http://arxiv.org/abs/1308.4767"}],"conference":{"end_date":"2013-10-23","start_date":"2013-10-20","name":"FMCAD: Formal Methods in Computer-Aided Design","location":"Portland, OR, United States"},"abstract":[{"lang":"eng","text":"It is often difficult to correctly implement a Boolean controller for a complex system, especially when concurrency is involved. Yet, it may be easy to formally specify a controller. For instance, for a pipelined processor it suffices to state that the visible behavior of the pipelined system should be identical to a non-pipelined reference system (Burch-Dill paradigm). We present a novel procedure to efficiently synthesize multiple Boolean control signals from a specification given as a quantified first-order formula (with a specific quantifier structure). Our approach uses uninterpreted functions to abstract details of the design. We construct an unsatisfiable SMT formula from the given specification. Then, from just one proof of unsatisfiability, we use a variant of Craig interpolation to compute multiple coordinated interpolants that implement the Boolean control signals. Our method avoids iterative learning and back-substitution of the control functions. We applied our approach to synthesize a controller for a simple two-stage pipelined processor, and present first experimental results."}],"page":"77 - 84","date_updated":"2021-01-12T06:50:19Z","type":"conference","publisher":"IEEE","department":[{"_id":"ToHe"}],"ec_funded":1,"title":"Synthesizing multiple boolean functions using interpolation on a single proof","date_published":"2013-12-11T00:00:00Z","_id":"1385","publication_status":"published","citation":{"ama":"Hofferek G, Gupta A, Könighofer B, Jiang J, Bloem R. Synthesizing multiple boolean functions using interpolation on a single proof. In: <i>2013 Formal Methods in Computer-Aided Design</i>. IEEE; 2013:77-84. doi:<a href=\"https://doi.org/10.1109/FMCAD.2013.6679394\">10.1109/FMCAD.2013.6679394</a>","ieee":"G. Hofferek, A. Gupta, B. Könighofer, J. Jiang, and R. Bloem, “Synthesizing multiple boolean functions using interpolation on a single proof,” in <i>2013 Formal Methods in Computer-Aided Design</i>, Portland, OR, United States, 2013, pp. 77–84.","apa":"Hofferek, G., Gupta, A., Könighofer, B., Jiang, J., &#38; Bloem, R. (2013). Synthesizing multiple boolean functions using interpolation on a single proof. In <i>2013 Formal Methods in Computer-Aided Design</i> (pp. 77–84). Portland, OR, United States: IEEE. <a href=\"https://doi.org/10.1109/FMCAD.2013.6679394\">https://doi.org/10.1109/FMCAD.2013.6679394</a>","chicago":"Hofferek, Georg, Ashutosh Gupta, Bettina Könighofer, Jie Jiang, and Roderick Bloem. “Synthesizing Multiple Boolean Functions Using Interpolation on a Single Proof.” In <i>2013 Formal Methods in Computer-Aided Design</i>, 77–84. IEEE, 2013. <a href=\"https://doi.org/10.1109/FMCAD.2013.6679394\">https://doi.org/10.1109/FMCAD.2013.6679394</a>.","mla":"Hofferek, Georg, et al. “Synthesizing Multiple Boolean Functions Using Interpolation on a Single Proof.” <i>2013 Formal Methods in Computer-Aided Design</i>, IEEE, 2013, pp. 77–84, doi:<a href=\"https://doi.org/10.1109/FMCAD.2013.6679394\">10.1109/FMCAD.2013.6679394</a>.","short":"G. Hofferek, A. Gupta, B. Könighofer, J. Jiang, R. Bloem, in:, 2013 Formal Methods in Computer-Aided Design, IEEE, 2013, pp. 77–84.","ista":"Hofferek G, Gupta A, Könighofer B, Jiang J, Bloem R. 2013. Synthesizing multiple boolean functions using interpolation on a single proof. 2013 Formal Methods in Computer-Aided Design. FMCAD: Formal Methods in Computer-Aided Design, 77–84."},"date_created":"2018-12-11T11:51:43Z","oa_version":"Preprint","quality_controlled":"1","external_id":{"arxiv":["1308.4767"]},"month":"12","language":[{"iso":"eng"}],"year":"2013","status":"public","day":"11","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publist_id":"5825","doi":"10.1109/FMCAD.2013.6679394","project":[{"name":"Rigorous Systems Engineering","_id":"25832EC2-B435-11E9-9278-68D0E5697425","grant_number":"S 11407_N23","call_identifier":"FWF"},{"_id":"25EE3708-B435-11E9-9278-68D0E5697425","name":"Quantitative Reactive Modeling","call_identifier":"FP7","grant_number":"267989"}],"publication":"2013 Formal Methods in Computer-Aided Design","arxiv":1,"oa":1},{"has_accepted_license":"1","series_title":"Lecture Notes in Computer Science","quality_controlled":"1","scopus_import":1,"oa_version":"Submitted Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publist_id":"5823","alternative_title":["LNCS"],"day":"01","article_processing_charge":"No","year":"2013","language":[{"iso":"eng"}],"status":"public","month":"07","doi":"10.1007/978-3-642-39212-2_11","project":[{"grant_number":"S 11407_N23","call_identifier":"FWF","name":"Rigorous Systems Engineering","_id":"25832EC2-B435-11E9-9278-68D0E5697425"},{"call_identifier":"FP7","grant_number":"267989","_id":"25EE3708-B435-11E9-9278-68D0E5697425","name":"Quantitative Reactive Modeling"}],"oa":1,"volume":7966,"date_updated":"2020-08-11T10:09:09Z","conference":{"name":"ICALP: Automata, Languages and Programming","location":"Riga, Latvia","start_date":"2013-07-08","end_date":"2013-07-12"},"abstract":[{"text":"Choices made by nondeterministic word automata depend on both the past (the prefix of the word read so far) and the future (the suffix yet to be read). In several applications, most notably synthesis, the future is diverse or unknown, leading to algorithms that are based on deterministic automata. Hoping to retain some of the advantages of nondeterministic automata, researchers have studied restricted classes of nondeterministic automata. Three such classes are nondeterministic automata that are good for trees (GFT; i.e., ones that can be expanded to tree automata accepting the derived tree languages, thus whose choices should satisfy diverse futures), good for games (GFG; i.e., ones whose choices depend only on the past), and determinizable by pruning (DBP; i.e., ones that embody equivalent deterministic automata). The theoretical properties and relative merits of the different classes are still open, having vagueness on whether they really differ from deterministic automata. In particular, while DBP ⊆ GFG ⊆ GFT, it is not known whether every GFT automaton is GFG and whether every GFG automaton is DBP. Also open is the possible succinctness of GFG and GFT automata compared to deterministic automata. We study these problems for ω-regular automata with all common acceptance conditions. We show that GFT=GFG⊃DBP, and describe a determinization construction for GFG automata.","lang":"eng"}],"page":"89 - 100","issue":"PART 2","file_date_updated":"2020-07-14T12:44:48Z","acknowledgement":"and ERC Grant QUALITY.","author":[{"last_name":"Boker","id":"31E297B6-F248-11E8-B48F-1D18A9856A87","first_name":"Udi","full_name":"Boker, Udi"},{"full_name":"Kuperberg, Denis","first_name":"Denis","last_name":"Kuperberg"},{"first_name":"Orna","full_name":"Kupferman, Orna","last_name":"Kupferman"},{"first_name":"Michał","full_name":"Skrzypczak, Michał","last_name":"Skrzypczak"}],"ddc":["000"],"type":"conference","intvolume":"      7966","file":[{"checksum":"98bc02e3793072e279ec8d364b381ff3","date_updated":"2020-07-14T12:44:48Z","access_level":"open_access","relation":"main_file","file_id":"7857","file_size":276982,"creator":"dernst","file_name":"2013_ICALP_Boker.pdf","date_created":"2020-05-15T11:05:50Z","content_type":"application/pdf"}],"publisher":"Springer","department":[{"_id":"ToHe"}],"publication_status":"published","citation":{"ista":"Boker U, Kuperberg D, Kupferman O, Skrzypczak M. 2013. Nondeterminism in the presence of a diverse or unknown future. 7966(PART 2), 89–100.","apa":"Boker, U., Kuperberg, D., Kupferman, O., &#38; Skrzypczak, M. (2013). Nondeterminism in the presence of a diverse or unknown future. Presented at the ICALP: Automata, Languages and Programming, Riga, Latvia: Springer. <a href=\"https://doi.org/10.1007/978-3-642-39212-2_11\">https://doi.org/10.1007/978-3-642-39212-2_11</a>","ama":"Boker U, Kuperberg D, Kupferman O, Skrzypczak M. Nondeterminism in the presence of a diverse or unknown future. 2013;7966(PART 2):89-100. doi:<a href=\"https://doi.org/10.1007/978-3-642-39212-2_11\">10.1007/978-3-642-39212-2_11</a>","ieee":"U. Boker, D. Kuperberg, O. Kupferman, and M. Skrzypczak, “Nondeterminism in the presence of a diverse or unknown future,” vol. 7966, no. PART 2. Springer, pp. 89–100, 2013.","short":"U. Boker, D. Kuperberg, O. Kupferman, M. Skrzypczak, 7966 (2013) 89–100.","chicago":"Boker, Udi, Denis Kuperberg, Orna Kupferman, and Michał Skrzypczak. “Nondeterminism in the Presence of a Diverse or Unknown Future.” Lecture Notes in Computer Science. Springer, 2013. <a href=\"https://doi.org/10.1007/978-3-642-39212-2_11\">https://doi.org/10.1007/978-3-642-39212-2_11</a>.","mla":"Boker, Udi, et al. <i>Nondeterminism in the Presence of a Diverse or Unknown Future</i>. Vol. 7966, no. PART 2, Springer, 2013, pp. 89–100, doi:<a href=\"https://doi.org/10.1007/978-3-642-39212-2_11\">10.1007/978-3-642-39212-2_11</a>."},"date_created":"2018-12-11T11:51:44Z","date_published":"2013-07-01T00:00:00Z","_id":"1387","ec_funded":1,"title":"Nondeterminism in the presence of a diverse or unknown future"},{"file":[{"file_id":"9176","success":1,"file_size":1514906,"creator":"dernst","checksum":"ed2d7b52933d134e8dc69d569baa284e","date_updated":"2021-02-22T11:28:36Z","access_level":"open_access","relation":"main_file","content_type":"application/pdf","file_name":"2013_Zufferey_thesis_final.pdf","date_created":"2021-02-22T11:28:36Z"},{"access_level":"closed","relation":"main_file","checksum":"cecc4c4b14225bee973d32e3dba91a55","date_updated":"2021-11-17T13:47:58Z","file_id":"10298","file_size":1378313,"creator":"cchlebak","date_created":"2021-11-16T14:42:52Z","file_name":"2013_Zufferey_thesis_final_pdfa.pdf","content_type":"application/pdf"}],"degree_awarded":"PhD","publisher":"Institute of Science and Technology Austria","department":[{"_id":"ToHe"},{"_id":"GradSch"}],"citation":{"short":"D. Zufferey, Analysis of Dynamic Message Passing Programs, Institute of Science and Technology Austria, 2013.","mla":"Zufferey, Damien. <i>Analysis of Dynamic Message Passing Programs</i>. Institute of Science and Technology Austria, 2013, doi:<a href=\"https://doi.org/10.15479/at:ista:1405\">10.15479/at:ista:1405</a>.","chicago":"Zufferey, Damien. “Analysis of Dynamic Message Passing Programs.” Institute of Science and Technology Austria, 2013. <a href=\"https://doi.org/10.15479/at:ista:1405\">https://doi.org/10.15479/at:ista:1405</a>.","apa":"Zufferey, D. (2013). <i>Analysis of dynamic message passing programs</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/at:ista:1405\">https://doi.org/10.15479/at:ista:1405</a>","ama":"Zufferey D. Analysis of dynamic message passing programs. 2013. doi:<a href=\"https://doi.org/10.15479/at:ista:1405\">10.15479/at:ista:1405</a>","ieee":"D. Zufferey, “Analysis of dynamic message passing programs,” Institute of Science and Technology Austria, 2013.","ista":"Zufferey D. 2013. Analysis of dynamic message passing programs. Institute of Science and Technology Austria."},"publication_status":"published","date_created":"2018-12-11T11:51:50Z","date_published":"2013-09-05T00:00:00Z","_id":"1405","title":"Analysis of dynamic message passing programs","ec_funded":1,"date_updated":"2023-09-07T11:36:37Z","page":"134","abstract":[{"lang":"eng","text":"Motivated by the analysis of highly dynamic message-passing systems, i.e. unbounded thread creation, mobility, etc. we present a framework for the analysis of depth-bounded systems. Depth-bounded systems are one of the most expressive known fragment of the π-calculus for which interesting verification problems are still decidable. Even though they are infinite state systems depth-bounded systems are well-structured, thus can be analyzed algorithmically. We give an interpretation of depth-bounded systems as graph-rewriting systems. This gives more flexibility and ease of use to apply depth-bounded systems to other type of systems like shared memory concurrency.\r\n\r\nFirst, we develop an adequate domain of limits for depth-bounded systems, a prerequisite for the effective representation of downward-closed sets. Downward-closed sets are needed by forward saturation-based algorithms to represent potentially infinite sets of states. Then, we present an abstract interpretation framework to compute the covering set of well-structured transition systems. Because, in general, the covering set is not computable, our abstraction over-approximates the actual covering set. Our abstraction captures the essence of acceleration based-algorithms while giving up enough precision to ensure convergence. We have implemented the analysis in the PICASSO tool and show that it is accurate in practice. Finally, we build some further analyses like termination using the covering set as starting point."}],"file_date_updated":"2021-11-17T13:47:58Z","main_file_link":[{"url":"http://dzufferey.github.io/files/2013_thesis.pdf"}],"author":[{"orcid":"0000-0002-3197-8736","first_name":"Damien","full_name":"Zufferey, Damien","id":"4397AC76-F248-11E8-B48F-1D18A9856A87","last_name":"Zufferey"}],"acknowledgement":"This work was supported in part by the Austrian Science Fund NFN RiSE (Rigorous Systems Engineering) and by the ERC Advanced Grant QUAREM (Quantitative Reactve Modeling).\r\nChapter 2, 3, and 4 are joint work with Thomas A. Henzinger and Thomas Wies. Chapter 2 was published in FoSSaCS 2010 as “Forward Analysis of Depth-Bounded Processes” [112]. Chapter 3 was published in VMCAI 2012 as “Ideal Abstractions for Well-Structured Transition Systems” [114]. Chap- ter 5.1 is joint work with Kshitij Bansal, Eric Koskinen, and Thomas Wies. It was published in TACAS 2013 as “Structural Counter Abstraction” [13]. The author’s contribution in this part is mostly related to the implementation. The theory required to understand the method and its implementation is quickly recalled to make the thesis self-contained, but should not be considered as a contribution. For the details of the methods, we refer the reader to the orig- inal publication [13] and the corresponding technical report [14]. Chapter 5.2 is ongoing work with Shahram Esmaeilsabzali, Rupak Majumdar, and Thomas Wies. I also would like to thank the people who supported over the past 4 years. My advisor Thomas A. Henzinger who gave me a lot of freedom to work on projects I was interested in. My collaborators, especially Thomas Wies with whom I worked since the beginning. The members of my thesis committee, Viktor Kun- cak and Rupak Majumdar, who also agreed to advise me. Simon Aeschbacher, Pavol Cerny, Cezara Dragoi, Arjun Radhakrishna, my family, friends and col- leagues who created an enjoyable environment. ","publication_identifier":{"issn":["2663-337X"]},"ddc":["000"],"type":"dissertation","doi":"10.15479/at:ista:1405","project":[{"call_identifier":"FWF","grant_number":"S 11407_N23","_id":"25832EC2-B435-11E9-9278-68D0E5697425","name":"Rigorous Systems Engineering"},{"call_identifier":"FP7","grant_number":"267989","_id":"25EE3708-B435-11E9-9278-68D0E5697425","name":"Quantitative Reactive Modeling"}],"oa":1,"supervisor":[{"id":"40876CD8-F248-11E8-B48F-1D18A9856A87","last_name":"Henzinger","orcid":"0000−0002−2985−7724","full_name":"Henzinger, Thomas A","first_name":"Thomas A"}],"has_accepted_license":"1","related_material":{"record":[{"relation":"part_of_dissertation","status":"public","id":"2847"},{"relation":"part_of_dissertation","id":"3251","status":"public"},{"relation":"part_of_dissertation","id":"4361","status":"public"}]},"oa_version":"Published Version","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","alternative_title":["ISTA Thesis"],"publist_id":"5802","day":"05","article_processing_charge":"No","year":"2013","language":[{"iso":"eng"}],"status":"public","month":"09"}]
