[{"_id":"14020","title":"Two-pulse field-free orientation reveals anisotropy of molecular shape resonance","abstract":[{"lang":"eng","text":"We report the observation of macroscopic field-free orientation, i.e., more than 73% of CO molecules pointing in the same direction. This is achieved through an all-optical scheme operating at high particle densities (>10(17)  cm(-3)) that combines one-color (ω) and two-color (ω+2ω) nonresonant femtosecond laser pulses. We show that the achieved orientation solely relies on the hyperpolarizability interaction as opposed to an ionization-depletion mechanism, thus, opening a wide range of applications. The achieved strong orientation enables us to reveal the molecular-frame anisotropies of the photorecombination amplitudes and phases caused by a shape resonance. The resonance appears as a local maximum in the even-harmonic emission around 28 eV. In contrast, the odd-harmonic emission is suppressed in this spectral region through the combined effects of an asymmetric photorecombination phase and a subcycle Stark effect, generic for polar molecules, that we experimentally identify."}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","pmid":1,"status":"public","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1311.3923"}],"intvolume":"       113","citation":{"apa":"Kraus, P. M., Baykusheva, D. R., &#38; Wörner, H. J. (2014). Two-pulse field-free orientation reveals anisotropy of molecular shape resonance. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physrevlett.113.023001\">https://doi.org/10.1103/physrevlett.113.023001</a>","ista":"Kraus PM, Baykusheva DR, Wörner HJ. 2014. Two-pulse field-free orientation reveals anisotropy of molecular shape resonance. Physical Review Letters. 113(2), 023001.","short":"P.M. Kraus, D.R. Baykusheva, H.J. Wörner, Physical Review Letters 113 (2014).","ieee":"P. M. Kraus, D. R. Baykusheva, and H. J. Wörner, “Two-pulse field-free orientation reveals anisotropy of molecular shape resonance,” <i>Physical Review Letters</i>, vol. 113, no. 2. American Physical Society, 2014.","mla":"Kraus, P. M., et al. “Two-Pulse Field-Free Orientation Reveals Anisotropy of Molecular Shape Resonance.” <i>Physical Review Letters</i>, vol. 113, no. 2, 023001, American Physical Society, 2014, doi:<a href=\"https://doi.org/10.1103/physrevlett.113.023001\">10.1103/physrevlett.113.023001</a>.","ama":"Kraus PM, Baykusheva DR, Wörner HJ. Two-pulse field-free orientation reveals anisotropy of molecular shape resonance. <i>Physical Review Letters</i>. 2014;113(2). doi:<a href=\"https://doi.org/10.1103/physrevlett.113.023001\">10.1103/physrevlett.113.023001</a>","chicago":"Kraus, P. M., Denitsa Rangelova Baykusheva, and H. J. Wörner. “Two-Pulse Field-Free Orientation Reveals Anisotropy of Molecular Shape Resonance.” <i>Physical Review Letters</i>. American Physical Society, 2014. <a href=\"https://doi.org/10.1103/physrevlett.113.023001\">https://doi.org/10.1103/physrevlett.113.023001</a>."},"scopus_import":"1","issue":"2","publication_identifier":{"eissn":["1079-7114"],"issn":["0031-9007"]},"publication":"Physical Review Letters","publisher":"American Physical Society","date_updated":"2023-08-22T09:02:56Z","doi":"10.1103/physrevlett.113.023001","article_processing_charge":"No","article_number":"023001","extern":"1","quality_controlled":"1","oa":1,"month":"07","volume":113,"date_published":"2014-07-11T00:00:00Z","type":"journal_article","oa_version":"Preprint","article_type":"original","external_id":{"pmid":["25062172"],"arxiv":["1311.3923"]},"language":[{"iso":"eng"}],"year":"2014","author":[{"first_name":"P. M.","full_name":"Kraus, P. M.","last_name":"Kraus"},{"last_name":"Baykusheva","full_name":"Baykusheva, Denitsa Rangelova","first_name":"Denitsa Rangelova","id":"71b4d059-2a03-11ee-914d-dfa3beed6530"},{"first_name":"H. J.","full_name":"Wörner, H. J.","last_name":"Wörner"}],"keyword":["General Physics and Astronomy"],"publication_status":"published","day":"11","date_created":"2023-08-10T06:38:38Z","arxiv":1},{"issue":"12","publication_identifier":{"issn":["0953-4075"],"eissn":["1361-6455"]},"scopus_import":"1","status":"public","intvolume":"        47","citation":{"mla":"Kraus, P. M., et al. “Two-Pulse Orientation Dynamics and High-Harmonic Spectroscopy of Strongly-Oriented Molecules.” <i>Journal of Physics B: Atomic, Molecular and Optical Physics</i>, vol. 47, no. 12, 124030, IOP Publishing, 2014, doi:<a href=\"https://doi.org/10.1088/0953-4075/47/12/124030\">10.1088/0953-4075/47/12/124030</a>.","ama":"Kraus PM, Baykusheva DR, Wörner HJ. Two-pulse orientation dynamics and high-harmonic spectroscopy of strongly-oriented molecules. <i>Journal of Physics B: Atomic, Molecular and Optical Physics</i>. 2014;47(12). doi:<a href=\"https://doi.org/10.1088/0953-4075/47/12/124030\">10.1088/0953-4075/47/12/124030</a>","chicago":"Kraus, P M, Denitsa Rangelova Baykusheva, and H J Wörner. “Two-Pulse Orientation Dynamics and High-Harmonic Spectroscopy of Strongly-Oriented Molecules.” <i>Journal of Physics B: Atomic, Molecular and Optical Physics</i>. IOP Publishing, 2014. <a href=\"https://doi.org/10.1088/0953-4075/47/12/124030\">https://doi.org/10.1088/0953-4075/47/12/124030</a>.","apa":"Kraus, P. M., Baykusheva, D. R., &#38; Wörner, H. J. (2014). Two-pulse orientation dynamics and high-harmonic spectroscopy of strongly-oriented molecules. <i>Journal of Physics B: Atomic, Molecular and Optical Physics</i>. IOP Publishing. <a href=\"https://doi.org/10.1088/0953-4075/47/12/124030\">https://doi.org/10.1088/0953-4075/47/12/124030</a>","ista":"Kraus PM, Baykusheva DR, Wörner HJ. 2014. Two-pulse orientation dynamics and high-harmonic spectroscopy of strongly-oriented molecules. Journal of Physics B: Atomic, Molecular and Optical Physics. 47(12), 124030.","short":"P.M. Kraus, D.R. Baykusheva, H.J. Wörner, Journal of Physics B: Atomic, Molecular and Optical Physics 47 (2014).","ieee":"P. M. Kraus, D. R. Baykusheva, and H. J. Wörner, “Two-pulse orientation dynamics and high-harmonic spectroscopy of strongly-oriented molecules,” <i>Journal of Physics B: Atomic, Molecular and Optical Physics</i>, vol. 47, no. 12. IOP Publishing, 2014."},"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1311.3923"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","abstract":[{"lang":"eng","text":"We present the detailed analysis of a new two-pulse orientation scheme that achieves macroscopic field-free orientation at the high particle densities required for attosecond and high-harmonic spectroscopies (Kraus et al 2013 arXiv:1311.3923). Carbon monoxide molecules are oriented by combining one-colour and delayed two-colour non-resonant femtosecond laser pulses. High-harmonic generation is used to probe the oriented wave-packet dynamics and reveals that a very high degree of orientation (Nup/Ntotal = 0.73–0.82) is achieved. We further extend this approach to orienting carbonyl sulphide molecules. We show that the present two-pulse scheme selectively enhances orientation created by the hyperpolarizability interaction whereas the ionization-depletion mechanism plays no role. We further control and optimize orientation through the delay between the one- and two-colour pump pulses. Finally, we demonstrate a complementary encoding of electronic-structure features, such as shape resonances, in the even- and odd-harmonic spectrum. The achieved progress makes two-pulse field-free orientation an attractive tool for a broad class of time-resolved measurements."}],"title":"Two-pulse orientation dynamics and high-harmonic spectroscopy of strongly-oriented molecules","_id":"14021","author":[{"full_name":"Kraus, P M","first_name":"P M","last_name":"Kraus"},{"last_name":"Baykusheva","id":"71b4d059-2a03-11ee-914d-dfa3beed6530","first_name":"Denitsa Rangelova","full_name":"Baykusheva, Denitsa Rangelova"},{"last_name":"Wörner","first_name":"H J","full_name":"Wörner, H J"}],"keyword":["Condensed Matter Physics","Atomic and Molecular Physics","and Optics"],"arxiv":1,"date_created":"2023-08-10T06:38:48Z","day":"10","publication_status":"published","language":[{"iso":"eng"}],"year":"2014","date_published":"2014-06-10T00:00:00Z","type":"journal_article","volume":47,"article_type":"original","oa_version":"Preprint","external_id":{"arxiv":["1311.3923"]},"article_processing_charge":"No","date_updated":"2023-08-22T09:04:30Z","publisher":"IOP Publishing","doi":"10.1088/0953-4075/47/12/124030","publication":"Journal of Physics B: Atomic, Molecular and Optical Physics","month":"06","oa":1,"quality_controlled":"1","article_number":"124030","extern":"1"},{"day":"11","publication_status":"published","date_created":"2021-11-29T13:29:31Z","arxiv":1,"keyword":["general physics and astronomy"],"author":[{"last_name":"Mognetti","first_name":"B. M.","full_name":"Mognetti, B. M."},{"first_name":"Anđela","id":"bf63d406-f056-11eb-b41d-f263a6566d8b","full_name":"Šarić, Anđela","orcid":"0000-0002-7854-2139","last_name":"Šarić"},{"last_name":"Angioletti-Uberti","first_name":"S.","full_name":"Angioletti-Uberti, S."},{"first_name":"A.","full_name":"Cacciuto, A.","last_name":"Cacciuto"},{"last_name":"Valeriani","first_name":"C.","full_name":"Valeriani, C."},{"last_name":"Frenkel","first_name":"D.","full_name":"Frenkel, D."}],"language":[{"iso":"eng"}],"year":"2013","article_type":"original","oa_version":"Preprint","external_id":{"pmid":["24483677"],"arxiv":["1311.4681"]},"date_published":"2013-12-11T00:00:00Z","type":"journal_article","volume":111,"oa":1,"quality_controlled":"1","article_number":"245702","extern":"1","month":"12","date_updated":"2021-11-29T14:05:19Z","publisher":"American Physical Society","doi":"10.1103/physrevlett.111.245702","publication":"Physical Review Letters","article_processing_charge":"No","publication_identifier":{"eissn":["1079-7114"],"issn":["0031-9007"]},"issue":"24","scopus_import":"1","intvolume":"       111","citation":{"ista":"Mognetti BM, Šarić A, Angioletti-Uberti S, Cacciuto A, Valeriani C, Frenkel D. 2013. Living clusters and crystals from low-density suspensions of active colloids. Physical Review Letters. 111(24), 245702.","apa":"Mognetti, B. M., Šarić, A., Angioletti-Uberti, S., Cacciuto, A., Valeriani, C., &#38; Frenkel, D. (2013). Living clusters and crystals from low-density suspensions of active colloids. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physrevlett.111.245702\">https://doi.org/10.1103/physrevlett.111.245702</a>","short":"B.M. Mognetti, A. Šarić, S. Angioletti-Uberti, A. Cacciuto, C. Valeriani, D. Frenkel, Physical Review Letters 111 (2013).","ieee":"B. M. Mognetti, A. Šarić, S. Angioletti-Uberti, A. Cacciuto, C. Valeriani, and D. Frenkel, “Living clusters and crystals from low-density suspensions of active colloids,” <i>Physical Review Letters</i>, vol. 111, no. 24. American Physical Society, 2013.","ama":"Mognetti BM, Šarić A, Angioletti-Uberti S, Cacciuto A, Valeriani C, Frenkel D. Living clusters and crystals from low-density suspensions of active colloids. <i>Physical Review Letters</i>. 2013;111(24). doi:<a href=\"https://doi.org/10.1103/physrevlett.111.245702\">10.1103/physrevlett.111.245702</a>","mla":"Mognetti, B. M., et al. “Living Clusters and Crystals from Low-Density Suspensions of Active Colloids.” <i>Physical Review Letters</i>, vol. 111, no. 24, 245702, American Physical Society, 2013, doi:<a href=\"https://doi.org/10.1103/physrevlett.111.245702\">10.1103/physrevlett.111.245702</a>.","chicago":"Mognetti, B. M., Anđela Šarić, S. Angioletti-Uberti, A. Cacciuto, C. Valeriani, and D. Frenkel. “Living Clusters and Crystals from Low-Density Suspensions of Active Colloids.” <i>Physical Review Letters</i>. American Physical Society, 2013. <a href=\"https://doi.org/10.1103/physrevlett.111.245702\">https://doi.org/10.1103/physrevlett.111.245702</a>."},"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1311.4681"}],"status":"public","acknowledgement":"This work was supported by the ERC Advanced Grant 227758, the National Science Foundation under Career Grant No. DMR-0846426, the Wolfson Merit Award 2007/R3 of the Royal Society of London and the EPSRC Programme Grant EP/I001352/1. BMM acknowledge T. Curk and A. Ballard for useful discussions. C. V. acknowledges financial support from a Juan de la Cierva Fellowship, from the Marie Curie Integration Grant PCIG-GA-2011-303941 ANISOKINEQ, and from the National Project FIS2010- 16159. S. A-U acknowledges support from the Alexander von Humboldt Foundation.","pmid":1,"title":"Living clusters and crystals from low-density suspensions of active colloids","_id":"10384","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","abstract":[{"text":"Recent studies aimed at investigating artificial analogs of bacterial colonies have shown that low-density suspensions of self-propelled particles confined in two dimensions can assemble into finite aggregates that merge and split, but have a typical size that remains constant (living clusters). In this Letter, we address the problem of the formation of living clusters and crystals of active particles in three dimensions. We study two systems: self-propelled particles interacting via a generic attractive potential and colloids that can move toward each other as a result of active agents (e.g., by molecular motors). In both cases, fluidlike “living” clusters form. We explain this general feature in terms of the balance between active forces and regression to thermodynamic equilibrium. This balance can be quantified in terms of a dimensionless number that allows us to collapse the observed clustering behavior onto a universal curve. We also discuss how active motion affects the kinetics of crystal formation.","lang":"eng"}]},{"oa_version":"None","article_type":"original","type":"journal_article","date_published":"2013-08-08T00:00:00Z","volume":9,"month":"08","quality_controlled":"1","extern":"1","article_processing_charge":"No","publisher":"Royal Society of Chemistry","doi":"10.1039/c3sm51495a","date_updated":"2021-11-29T14:05:23Z","publication":"Soft Matter","date_created":"2021-11-29T13:31:24Z","day":"08","publication_status":"published","keyword":["condensed matter physics","general chemistry"],"author":[{"full_name":"Napoli, Joseph A.","first_name":"Joseph A.","last_name":"Napoli"},{"full_name":"Šarić, Anđela","first_name":"Anđela","id":"bf63d406-f056-11eb-b41d-f263a6566d8b","orcid":"0000-0002-7854-2139","last_name":"Šarić"},{"last_name":"Cacciuto","first_name":"Angelo","full_name":"Cacciuto, Angelo"}],"page":"8881-8886","year":"2013","language":[{"iso":"eng"}],"intvolume":"         9","citation":{"short":"J.A. Napoli, A. Šarić, A. Cacciuto, Soft Matter 9 (2013) 8881–8886.","ieee":"J. A. Napoli, A. Šarić, and A. Cacciuto, “Collapsing nanoparticle-laden nanotubes,” <i>Soft Matter</i>, vol. 9, no. 37. Royal Society of Chemistry, pp. 8881–8886, 2013.","apa":"Napoli, J. A., Šarić, A., &#38; Cacciuto, A. (2013). Collapsing nanoparticle-laden nanotubes. <i>Soft Matter</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/c3sm51495a\">https://doi.org/10.1039/c3sm51495a</a>","ista":"Napoli JA, Šarić A, Cacciuto A. 2013. Collapsing nanoparticle-laden nanotubes. Soft Matter. 9(37), 8881–8886.","chicago":"Napoli, Joseph A., Anđela Šarić, and Angelo Cacciuto. “Collapsing Nanoparticle-Laden Nanotubes.” <i>Soft Matter</i>. Royal Society of Chemistry, 2013. <a href=\"https://doi.org/10.1039/c3sm51495a\">https://doi.org/10.1039/c3sm51495a</a>.","mla":"Napoli, Joseph A., et al. “Collapsing Nanoparticle-Laden Nanotubes.” <i>Soft Matter</i>, vol. 9, no. 37, Royal Society of Chemistry, 2013, pp. 8881–86, doi:<a href=\"https://doi.org/10.1039/c3sm51495a\">10.1039/c3sm51495a</a>.","ama":"Napoli JA, Šarić A, Cacciuto A. Collapsing nanoparticle-laden nanotubes. <i>Soft Matter</i>. 2013;9(37):8881-8886. doi:<a href=\"https://doi.org/10.1039/c3sm51495a\">10.1039/c3sm51495a</a>"},"status":"public","acknowledgement":"This work was supported by the National Science Foundation under Career Grant no. DMR-0846426.","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","abstract":[{"lang":"eng","text":"We show how self-assembly of sticky nanoparticles can drive radial collapse of thin-walled nanotubes. Using numerical simulations, we study the transition as a function of the geometric and elastic parameters of the nanotube and the binding strength of the nanoparticles. We find that it is possible to derive a simple scaling law relating all these parameters, and estimate bounds for the onset conditions leading to the collapse of the nanotube. We also study the reverse process – the nanoparticle release from the folded state – and find that the stability of the collapsed state can be greatly improved by increasing the bending rigidity of the nanotubes. Our results suggest ways to strengthen the mechanical properties of nanotubes, but also indicate that the control of nanoparticle self-assembly on these nanotubes can lead to nanoparticle-laden responsive materials."}],"title":"Collapsing nanoparticle-laden nanotubes","_id":"10385","publication_identifier":{"issn":["1744-683X"],"eissn":["1744-6848"]},"issue":"37","scopus_import":"1"},{"acknowledgement":"This work was supported by the National Science Foundation under Career Grant No. DMR 0846426. The authors thank J. C. Pàmies for many fruitful discussions on the subject.","title":"Self-assembly of nanoparticles adsorbed on fluid and elastic membranes","_id":"10386","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","abstract":[{"text":"In this paper we review recent numerical and theoretical developments of particle self-assembly on fluid and elastic membranes and compare them to available experimental realizations. We discuss the problem and its applications in biology and materials science, and give an overview of numerical models and strategies to study these systems across all length-scales. As this is a very broad field, this review focuses exclusively on surface-driven aggregation of nanoparticles that are at least one order of magnitude larger than the surface thickness and are adsorbed onto it. In this regime, all chemical details of the surface can be ignored in favor of a coarse-grained representation, and the collective behavior of many particles can be monitored and analyzed. We review the existing literature on how the mechanical properties and the geometry of the surface affect the structure of the particle aggregates and how these can drive shape deformation on the surface.","lang":"eng"}],"intvolume":"         9","citation":{"ieee":"A. Šarić and A. Cacciuto, “Self-assembly of nanoparticles adsorbed on fluid and elastic membranes,” <i>Soft Matter</i>, vol. 9, no. 29. Royal Society of Chemistry, 2013.","short":"A. Šarić, A. Cacciuto, Soft Matter 9 (2013).","apa":"Šarić, A., &#38; Cacciuto, A. (2013). Self-assembly of nanoparticles adsorbed on fluid and elastic membranes. <i>Soft Matter</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/c3sm50188d\">https://doi.org/10.1039/c3sm50188d</a>","ista":"Šarić A, Cacciuto A. 2013. Self-assembly of nanoparticles adsorbed on fluid and elastic membranes. Soft Matter. 9(29), 6677.","chicago":"Šarić, Anđela, and Angelo Cacciuto. “Self-Assembly of Nanoparticles Adsorbed on Fluid and Elastic Membranes.” <i>Soft Matter</i>. Royal Society of Chemistry, 2013. <a href=\"https://doi.org/10.1039/c3sm50188d\">https://doi.org/10.1039/c3sm50188d</a>.","mla":"Šarić, Anđela, and Angelo Cacciuto. “Self-Assembly of Nanoparticles Adsorbed on Fluid and Elastic Membranes.” <i>Soft Matter</i>, vol. 9, no. 29, 6677, Royal Society of Chemistry, 2013, doi:<a href=\"https://doi.org/10.1039/c3sm50188d\">10.1039/c3sm50188d</a>.","ama":"Šarić A, Cacciuto A. Self-assembly of nanoparticles adsorbed on fluid and elastic membranes. <i>Soft Matter</i>. 2013;9(29). doi:<a href=\"https://doi.org/10.1039/c3sm50188d\">10.1039/c3sm50188d</a>"},"main_file_link":[{"url":"https://pubs.rsc.org/en/content/articlehtml/2013/sm/c3sm50188d"}],"status":"public","scopus_import":"1","publication_identifier":{"issn":["1744-683X"],"eissn":["1744-6848"]},"issue":"29","quality_controlled":"1","article_number":"6677","extern":"1","month":"05","date_updated":"2021-11-29T14:29:31Z","doi":"10.1039/c3sm50188d","publisher":"Royal Society of Chemistry","publication":"Soft Matter","article_processing_charge":"No","oa_version":"None","article_type":"original","date_published":"2013-05-03T00:00:00Z","type":"journal_article","volume":9,"year":"2013","language":[{"iso":"eng"}],"day":"03","publication_status":"published","date_created":"2021-11-29T14:06:32Z","author":[{"full_name":"Šarić, Anđela","id":"bf63d406-f056-11eb-b41d-f263a6566d8b","first_name":"Anđela","last_name":"Šarić","orcid":"0000-0002-7854-2139"},{"last_name":"Cacciuto","full_name":"Cacciuto, Angelo","first_name":"Angelo"}],"keyword":["condensed matter physics","general chemistry"]},{"oa_version":"None","article_type":"original","intvolume":"       315","citation":{"ista":"Kaloshin V, Saprykina M. 2012. An example of a nearly integrable Hamiltonian system with a trajectory dense in a set of maximal Hausdorff dimension. Communications in Mathematical Physics. 315(3), 643–697.","apa":"Kaloshin, V., &#38; Saprykina, M. (2012). An example of a nearly integrable Hamiltonian system with a trajectory dense in a set of maximal Hausdorff dimension. <i>Communications in Mathematical Physics</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00220-012-1532-x\">https://doi.org/10.1007/s00220-012-1532-x</a>","short":"V. Kaloshin, M. Saprykina, Communications in Mathematical Physics 315 (2012) 643–697.","ieee":"V. Kaloshin and M. Saprykina, “An example of a nearly integrable Hamiltonian system with a trajectory dense in a set of maximal Hausdorff dimension,” <i>Communications in Mathematical Physics</i>, vol. 315, no. 3. Springer Nature, pp. 643–697, 2012.","ama":"Kaloshin V, Saprykina M. An example of a nearly integrable Hamiltonian system with a trajectory dense in a set of maximal Hausdorff dimension. <i>Communications in Mathematical Physics</i>. 2012;315(3):643-697. doi:<a href=\"https://doi.org/10.1007/s00220-012-1532-x\">10.1007/s00220-012-1532-x</a>","mla":"Kaloshin, Vadim, and Maria Saprykina. “An Example of a Nearly Integrable Hamiltonian System with a Trajectory Dense in a Set of Maximal Hausdorff Dimension.” <i>Communications in Mathematical Physics</i>, vol. 315, no. 3, Springer Nature, 2012, pp. 643–97, doi:<a href=\"https://doi.org/10.1007/s00220-012-1532-x\">10.1007/s00220-012-1532-x</a>.","chicago":"Kaloshin, Vadim, and Maria Saprykina. “An Example of a Nearly Integrable Hamiltonian System with a Trajectory Dense in a Set of Maximal Hausdorff Dimension.” <i>Communications in Mathematical Physics</i>. Springer Nature, 2012. <a href=\"https://doi.org/10.1007/s00220-012-1532-x\">https://doi.org/10.1007/s00220-012-1532-x</a>."},"volume":315,"type":"journal_article","date_published":"2012-11-01T00:00:00Z","status":"public","month":"11","extern":"1","quality_controlled":"1","abstract":[{"text":"The famous ergodic hypothesis suggests that for a typical Hamiltonian on a typical energy surface nearly all trajectories are dense. KAM theory disproves it. Ehrenfest (The Conceptual Foundations of the Statistical Approach in Mechanics. Ithaca, NY: Cornell University Press, 1959) and Birkhoff (Collected Math Papers. Vol 2, New York: Dover, pp 462–465, 1968) stated the quasi-ergodic hypothesis claiming that a typical Hamiltonian on a typical energy surface has a dense orbit. This question is wide open. Herman (Proceedings of the International Congress of Mathematicians, Vol II (Berlin, 1998). Doc Math 1998, Extra Vol II, Berlin: Int Math Union, pp 797–808, 1998) proposed to look for an example of a Hamiltonian near H0(I)=⟨I,I⟩2 with a dense orbit on the unit energy surface. In this paper we construct a Hamiltonian H0(I)+εH1(θ,I,ε) which has an orbit dense in a set of maximal Hausdorff dimension equal to 5 on the unit energy surface.","lang":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","_id":"8502","publication":"Communications in Mathematical Physics","doi":"10.1007/s00220-012-1532-x","publisher":"Springer Nature","title":"An example of a nearly integrable Hamiltonian system with a trajectory dense in a set of maximal Hausdorff dimension","date_updated":"2021-01-12T08:19:44Z","date_created":"2020-09-18T10:47:16Z","publication_identifier":{"issn":["0010-3616","1432-0916"]},"publication_status":"published","day":"01","keyword":["Mathematical Physics","Statistical and Nonlinear Physics"],"author":[{"last_name":"Kaloshin","orcid":"0000-0002-6051-2628","first_name":"Vadim","id":"FE553552-CDE8-11E9-B324-C0EBE5697425","full_name":"Kaloshin, Vadim"},{"full_name":"Saprykina, Maria","first_name":"Maria","last_name":"Saprykina"}],"issue":"3","page":"643-697","year":"2012","language":[{"iso":"eng"}]},{"volume":109,"type":"journal_article","date_published":"2012-10-31T00:00:00Z","oa_version":"Preprint","article_type":"original","external_id":{"pmid":["23215334"],"arxiv":["1206.3528"]},"publication":"Physical Review Letters","publisher":"American Physical Society","doi":"10.1103/physrevlett.109.188101","date_updated":"2021-11-29T14:29:25Z","article_processing_charge":"No","extern":"1","article_number":"188101","quality_controlled":"1","oa":1,"month":"10","author":[{"last_name":"Šarić","orcid":"0000-0002-7854-2139","full_name":"Šarić, Anđela","first_name":"Anđela","id":"bf63d406-f056-11eb-b41d-f263a6566d8b"},{"last_name":"Cacciuto","first_name":"Angelo","full_name":"Cacciuto, Angelo"}],"keyword":["general physics and astronomy"],"publication_status":"published","day":"31","arxiv":1,"date_created":"2021-11-29T14:08:00Z","language":[{"iso":"eng"}],"year":"2012","status":"public","main_file_link":[{"url":"https://arxiv.org/abs/1206.3528","open_access":"1"}],"intvolume":"       109","citation":{"chicago":"Šarić, Anđela, and Angelo Cacciuto. “Mechanism of Membrane Tube Formation Induced by Adhesive Nanocomponents.” <i>Physical Review Letters</i>. American Physical Society, 2012. <a href=\"https://doi.org/10.1103/physrevlett.109.188101\">https://doi.org/10.1103/physrevlett.109.188101</a>.","ama":"Šarić A, Cacciuto A. Mechanism of membrane tube formation induced by adhesive nanocomponents. <i>Physical Review Letters</i>. 2012;109(18). doi:<a href=\"https://doi.org/10.1103/physrevlett.109.188101\">10.1103/physrevlett.109.188101</a>","mla":"Šarić, Anđela, and Angelo Cacciuto. “Mechanism of Membrane Tube Formation Induced by Adhesive Nanocomponents.” <i>Physical Review Letters</i>, vol. 109, no. 18, 188101, American Physical Society, 2012, doi:<a href=\"https://doi.org/10.1103/physrevlett.109.188101\">10.1103/physrevlett.109.188101</a>.","ieee":"A. Šarić and A. Cacciuto, “Mechanism of membrane tube formation induced by adhesive nanocomponents,” <i>Physical Review Letters</i>, vol. 109, no. 18. American Physical Society, 2012.","short":"A. Šarić, A. Cacciuto, Physical Review Letters 109 (2012).","ista":"Šarić A, Cacciuto A. 2012. Mechanism of membrane tube formation induced by adhesive nanocomponents. Physical Review Letters. 109(18), 188101.","apa":"Šarić, A., &#38; Cacciuto, A. (2012). Mechanism of membrane tube formation induced by adhesive nanocomponents. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physrevlett.109.188101\">https://doi.org/10.1103/physrevlett.109.188101</a>"},"_id":"10387","title":"Mechanism of membrane tube formation induced by adhesive nanocomponents","abstract":[{"lang":"eng","text":"We report numerical simulations of membrane tubulation driven by large colloidal particles. Using Monte Carlo simulations we study how the process depends on particle size and binding strength, and present accurate free energy calculations to sort out how tube formation compares with the competing budding process. We find that tube formation is a result of the collective behavior of the particles adhering on the surface, and it occurs for binding strengths that are smaller than those required for budding. We also find that long linear aggregates of particles forming on the membrane surface act as nucleation seeds for tubulation by lowering the free energy barrier associated to the process."}],"user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","pmid":1,"issue":"18","publication_identifier":{"issn":["0031-9007"],"eissn":["1079-7114"]},"scopus_import":"1"},{"year":"2012","language":[{"iso":"eng"}],"keyword":["general physics and astronomy"],"author":[{"last_name":"Šarić","orcid":"0000-0002-7854-2139","id":"bf63d406-f056-11eb-b41d-f263a6566d8b","first_name":"Anđela","full_name":"Šarić, Anđela"},{"first_name":"Angelo","full_name":"Cacciuto, Angelo","last_name":"Cacciuto"}],"arxiv":1,"date_created":"2021-11-29T14:30:05Z","day":"14","publication_status":"published","article_processing_charge":"No","publisher":"American Physical Society","date_updated":"2021-11-29T15:12:13Z","doi":"10.1103/physrevlett.108.118101","publication":"Physical Review Letters","month":"03","oa":1,"quality_controlled":"1","extern":"1","article_number":"118101","date_published":"2012-03-14T00:00:00Z","type":"journal_article","volume":108,"external_id":{"arxiv":["1201.0036"],"pmid":["22540513"]},"article_type":"original","oa_version":"Preprint","scopus_import":"1","issue":"11","publication_identifier":{"issn":["0031-9007"],"eissn":["1079-7114"]},"user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","abstract":[{"text":"Using computer simulations, we show that lipid membranes can mediate linear aggregation of spherical nanoparticles binding to it for a wide range of biologically relevant bending rigidities. This result is in net contrast with the isotropic aggregation of nanoparticles on fluid interfaces or the expected clustering of isotropic insertions in biological membranes. We present a phase diagram indicating where linear aggregation is expected and compute explicitly the free-energy barriers associated with linear and isotropic aggregation. Finally, we provide simple scaling arguments to explain this phenomenology.","lang":"eng"}],"title":"Fluid membranes can drive linear aggregation of adsorbed spherical nanoparticles","_id":"10388","pmid":1,"acknowledgement":"This work was supported by the National Science Foundation under Career Grant No. DMR-0846426.\r\n","status":"public","intvolume":"       108","citation":{"short":"A. Šarić, A. Cacciuto, Physical Review Letters 108 (2012).","ieee":"A. Šarić and A. Cacciuto, “Fluid membranes can drive linear aggregation of adsorbed spherical nanoparticles,” <i>Physical Review Letters</i>, vol. 108, no. 11. American Physical Society, 2012.","apa":"Šarić, A., &#38; Cacciuto, A. (2012). Fluid membranes can drive linear aggregation of adsorbed spherical nanoparticles. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physrevlett.108.118101\">https://doi.org/10.1103/physrevlett.108.118101</a>","ista":"Šarić A, Cacciuto A. 2012. Fluid membranes can drive linear aggregation of adsorbed spherical nanoparticles. Physical Review Letters. 108(11), 118101.","chicago":"Šarić, Anđela, and Angelo Cacciuto. “Fluid Membranes Can Drive Linear Aggregation of Adsorbed Spherical Nanoparticles.” <i>Physical Review Letters</i>. American Physical Society, 2012. <a href=\"https://doi.org/10.1103/physrevlett.108.118101\">https://doi.org/10.1103/physrevlett.108.118101</a>.","mla":"Šarić, Anđela, and Angelo Cacciuto. “Fluid Membranes Can Drive Linear Aggregation of Adsorbed Spherical Nanoparticles.” <i>Physical Review Letters</i>, vol. 108, no. 11, 118101, American Physical Society, 2012, doi:<a href=\"https://doi.org/10.1103/physrevlett.108.118101\">10.1103/physrevlett.108.118101</a>.","ama":"Šarić A, Cacciuto A. Fluid membranes can drive linear aggregation of adsorbed spherical nanoparticles. <i>Physical Review Letters</i>. 2012;108(11). doi:<a href=\"https://doi.org/10.1103/physrevlett.108.118101\">10.1103/physrevlett.108.118101</a>"},"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1201.0036"}]},{"citation":{"ieee":"P. Schanda, B. H. Meier, and M. Ernst, “Accurate measurement of one-bond H–X heteronuclear dipolar couplings in MAS solid-state NMR,” <i>Journal of Magnetic Resonance</i>, vol. 210, no. 2. Elsevier, pp. 246–259, 2011.","short":"P. Schanda, B.H. Meier, M. Ernst, Journal of Magnetic Resonance 210 (2011) 246–259.","ista":"Schanda P, Meier BH, Ernst M. 2011. Accurate measurement of one-bond H–X heteronuclear dipolar couplings in MAS solid-state NMR. Journal of Magnetic Resonance. 210(2), 246–259.","apa":"Schanda, P., Meier, B. H., &#38; Ernst, M. (2011). Accurate measurement of one-bond H–X heteronuclear dipolar couplings in MAS solid-state NMR. <i>Journal of Magnetic Resonance</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jmr.2011.03.015\">https://doi.org/10.1016/j.jmr.2011.03.015</a>","chicago":"Schanda, Paul, Beat H. Meier, and Matthias Ernst. “Accurate Measurement of One-Bond H–X Heteronuclear Dipolar Couplings in MAS Solid-State NMR.” <i>Journal of Magnetic Resonance</i>. Elsevier, 2011. <a href=\"https://doi.org/10.1016/j.jmr.2011.03.015\">https://doi.org/10.1016/j.jmr.2011.03.015</a>.","ama":"Schanda P, Meier BH, Ernst M. Accurate measurement of one-bond H–X heteronuclear dipolar couplings in MAS solid-state NMR. <i>Journal of Magnetic Resonance</i>. 2011;210(2):246-259. doi:<a href=\"https://doi.org/10.1016/j.jmr.2011.03.015\">10.1016/j.jmr.2011.03.015</a>","mla":"Schanda, Paul, et al. “Accurate Measurement of One-Bond H–X Heteronuclear Dipolar Couplings in MAS Solid-State NMR.” <i>Journal of Magnetic Resonance</i>, vol. 210, no. 2, Elsevier, 2011, pp. 246–59, doi:<a href=\"https://doi.org/10.1016/j.jmr.2011.03.015\">10.1016/j.jmr.2011.03.015</a>."},"intvolume":"       210","article_type":"original","oa_version":"None","status":"public","volume":210,"date_published":"2011-06-01T00:00:00Z","type":"journal_article","extern":"1","quality_controlled":"1","month":"06","publication":"Journal of Magnetic Resonance","_id":"8469","doi":"10.1016/j.jmr.2011.03.015","publisher":"Elsevier","date_updated":"2021-01-12T08:19:29Z","title":"Accurate measurement of one-bond H–X heteronuclear dipolar couplings in MAS solid-state NMR","abstract":[{"text":"The accurate experimental determination of dipolar-coupling constants for one-bond heteronuclear dipolar couplings in solids is a key for the quantification of the amplitudes of motional processes. Averaging of the dipolar coupling reports on motions on time scales up to the inverse of the coupling constant, in our case tens of microseconds. Combining dipolar-coupling derived order parameters that characterize the amplitudes of the motion with relaxation data leads to a more precise characterization of the dynamical parameters and helps to disentangle the amplitudes and the time scales of the motional processes, which impact relaxation rates in a highly correlated way. Here. we describe and characterize an improved experimental protocol – based on REDOR – to measure these couplings in perdeuterated proteins with a reduced sensitivity to experimental missettings. Because such effects are presently the dominant source of systematic errors in experimental dipolar-coupling measurements, these compensated experiments should help to significantly improve the precision of such data. A detailed comparison with other commonly used pulse sequences (T-MREV, phase-inverted CP,R18 5/2, and R18 7/1) is provided.","lang":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","publication_status":"published","day":"01","publication_identifier":{"issn":["1090-7807"]},"date_created":"2020-09-18T10:10:50Z","page":"246-259","author":[{"last_name":"Schanda","orcid":"0000-0002-9350-7606","first_name":"Paul","id":"7B541462-FAF6-11E9-A490-E8DFE5697425","full_name":"Schanda, Paul"},{"full_name":"Meier, Beat H.","first_name":"Beat H.","last_name":"Meier"},{"first_name":"Matthias","full_name":"Ernst, Matthias","last_name":"Ernst"}],"keyword":["Nuclear and High Energy Physics","Biophysics","Biochemistry","Condensed Matter Physics"],"issue":"2","year":"2011","language":[{"iso":"eng"}]},{"publication_identifier":{"issn":["1439-4235"]},"date_created":"2020-09-18T10:10:56Z","day":"15","publication_status":"published","issue":"5","keyword":["Physical and Theoretical Chemistry","Atomic and Molecular Physics","and Optics"],"author":[{"last_name":"Huber","full_name":"Huber, Matthias","first_name":"Matthias"},{"first_name":"Sebastian","full_name":"Hiller, Sebastian","last_name":"Hiller"},{"full_name":"Schanda, Paul","first_name":"Paul","id":"7B541462-FAF6-11E9-A490-E8DFE5697425","orcid":"0000-0002-9350-7606","last_name":"Schanda"},{"last_name":"Ernst","first_name":"Matthias","full_name":"Ernst, Matthias"},{"full_name":"Böckmann, Anja","first_name":"Anja","last_name":"Böckmann"},{"last_name":"Verel","full_name":"Verel, René","first_name":"René"},{"last_name":"Meier","full_name":"Meier, Beat H.","first_name":"Beat H."}],"page":"915-918","language":[{"iso":"eng"}],"year":"2011","article_type":"original","oa_version":"None","citation":{"ama":"Huber M, Hiller S, Schanda P, et al. A proton-detected 4D solid-state NMR experiment for protein structure determination. <i>ChemPhysChem</i>. 2011;12(5):915-918. doi:<a href=\"https://doi.org/10.1002/cphc.201100062\">10.1002/cphc.201100062</a>","mla":"Huber, Matthias, et al. “A Proton-Detected 4D Solid-State NMR Experiment for Protein Structure Determination.” <i>ChemPhysChem</i>, vol. 12, no. 5, Wiley, 2011, pp. 915–18, doi:<a href=\"https://doi.org/10.1002/cphc.201100062\">10.1002/cphc.201100062</a>.","chicago":"Huber, Matthias, Sebastian Hiller, Paul Schanda, Matthias Ernst, Anja Böckmann, René Verel, and Beat H. Meier. “A Proton-Detected 4D Solid-State NMR Experiment for Protein Structure Determination.” <i>ChemPhysChem</i>. Wiley, 2011. <a href=\"https://doi.org/10.1002/cphc.201100062\">https://doi.org/10.1002/cphc.201100062</a>.","ista":"Huber M, Hiller S, Schanda P, Ernst M, Böckmann A, Verel R, Meier BH. 2011. A proton-detected 4D solid-state NMR experiment for protein structure determination. ChemPhysChem. 12(5), 915–918.","apa":"Huber, M., Hiller, S., Schanda, P., Ernst, M., Böckmann, A., Verel, R., &#38; Meier, B. H. (2011). A proton-detected 4D solid-state NMR experiment for protein structure determination. <i>ChemPhysChem</i>. Wiley. <a href=\"https://doi.org/10.1002/cphc.201100062\">https://doi.org/10.1002/cphc.201100062</a>","ieee":"M. Huber <i>et al.</i>, “A proton-detected 4D solid-state NMR experiment for protein structure determination,” <i>ChemPhysChem</i>, vol. 12, no. 5. Wiley, pp. 915–918, 2011.","short":"M. Huber, S. Hiller, P. Schanda, M. Ernst, A. Böckmann, R. Verel, B.H. Meier, ChemPhysChem 12 (2011) 915–918."},"intvolume":"        12","date_published":"2011-02-15T00:00:00Z","type":"journal_article","volume":12,"status":"public","month":"02","quality_controlled":"1","extern":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","abstract":[{"text":"Adding a new dimension: 4D or 3D proton‐detected spectra of perdeuterated protein samples with 1H labelled amides and methyl groups permit collecting unambiguous distance restraints with high sensitivity and determining protein structure by solid‐state NMR (see picture).","lang":"eng"}],"doi":"10.1002/cphc.201100062","publisher":"Wiley","date_updated":"2021-01-12T08:19:30Z","title":"A proton-detected 4D solid-state NMR experiment for protein structure determination","_id":"8470","publication":"ChemPhysChem"},{"language":[{"iso":"eng"}],"year":"2011","day":"08","publication_status":"published","date_created":"2021-11-29T14:33:18Z","arxiv":1,"keyword":["condensed matter physics","general chemistry"],"author":[{"first_name":"Anđela","id":"bf63d406-f056-11eb-b41d-f263a6566d8b","full_name":"Šarić, Anđela","last_name":"Šarić","orcid":"0000-0002-7854-2139"},{"last_name":"Cacciuto","first_name":"Angelo","full_name":"Cacciuto, Angelo"}],"quality_controlled":"1","oa":1,"article_number":"8324","extern":"1","month":"08","doi":"10.1039/c1sm05773a","date_updated":"2021-11-29T15:12:10Z","publisher":"Royal Society of Chemistry","publication":"Soft Matter","article_processing_charge":"No","oa_version":"Preprint","external_id":{"arxiv":["1106.2995"]},"article_type":"original","type":"journal_article","date_published":"2011-08-08T00:00:00Z","volume":7,"scopus_import":"1","publication_identifier":{"issn":["1744-683X"],"eissn":["1744-6848"]},"issue":"18","acknowledgement":"This work was supported by the National Science Foundation under Career Grant No. DMR-0846426. We thank Josep C. Pàmies and William L. Miller for helpful discussions.","title":"Soft elastic surfaces as a platform for particle self-assembly","_id":"10389","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","abstract":[{"text":"We perform numerical simulations to study self-assembly of nanoparticles mediated by an elastic planar surface. We show how the nontrivial elastic response to deformations of these surfaces leads to anisotropic interactions between the particles resulting in aggregates having different geometrical features. The morphology of the patterns can be controlled by the mechanical properties of the surface and the strength of the particle adhesion. We use simple scaling arguments to understand the formation of the different structures, and we show how the adhering particles can cause the underlying elastic substrate to wrinkle if two of its opposite edges are clamped. Finally, we discuss the implications of our results and suggest how elastic surfaces could be used in nanofabrication.","lang":"eng"}],"citation":{"chicago":"Šarić, Anđela, and Angelo Cacciuto. “Soft Elastic Surfaces as a Platform for Particle Self-Assembly.” <i>Soft Matter</i>. Royal Society of Chemistry, 2011. <a href=\"https://doi.org/10.1039/c1sm05773a\">https://doi.org/10.1039/c1sm05773a</a>.","ama":"Šarić A, Cacciuto A. Soft elastic surfaces as a platform for particle self-assembly. <i>Soft Matter</i>. 2011;7(18). doi:<a href=\"https://doi.org/10.1039/c1sm05773a\">10.1039/c1sm05773a</a>","mla":"Šarić, Anđela, and Angelo Cacciuto. “Soft Elastic Surfaces as a Platform for Particle Self-Assembly.” <i>Soft Matter</i>, vol. 7, no. 18, 8324, Royal Society of Chemistry, 2011, doi:<a href=\"https://doi.org/10.1039/c1sm05773a\">10.1039/c1sm05773a</a>.","ieee":"A. Šarić and A. Cacciuto, “Soft elastic surfaces as a platform for particle self-assembly,” <i>Soft Matter</i>, vol. 7, no. 18. Royal Society of Chemistry, 2011.","short":"A. Šarić, A. Cacciuto, Soft Matter 7 (2011).","ista":"Šarić A, Cacciuto A. 2011. Soft elastic surfaces as a platform for particle self-assembly. Soft Matter. 7(18), 8324.","apa":"Šarić, A., &#38; Cacciuto, A. (2011). Soft elastic surfaces as a platform for particle self-assembly. <i>Soft Matter</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/c1sm05773a\">https://doi.org/10.1039/c1sm05773a</a>"},"intvolume":"         7","main_file_link":[{"url":"https://arxiv.org/abs/1106.2995","open_access":"1"}],"status":"public"},{"user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","abstract":[{"text":"We use numerical simulations to show how noninteracting hard particles binding to a deformable elastic shell may self-assemble into a variety of linear patterns. This is a result of the nontrivial elastic response to deformations of shells. The morphology of the patterns can be controlled by the mechanical properties of the surface, and can be fine-tuned by varying the binding energy of the particles. We also repeat our calculations for a fully flexible chain and find that the chain conformations follow patterns similar to those formed by the nanoparticles under analogous conditions. We propose a simple way of understanding and sorting the different structures and relate it to the underlying shape transition of the shell. Finally, we discuss the implications of our results.","lang":"eng"}],"title":"Particle self-assembly on soft elastic shells","_id":"10127","acknowledgement":"This work was supported by the National Science Foundation under Career Grant No. DMR-0846426. We thank Josep C. Pàmies for helpful discussions.","status":"public","intvolume":"         7","citation":{"apa":"Šarić, A., &#38; Cacciuto, A. (2010). Particle self-assembly on soft elastic shells. <i>Soft Matter</i>. Royal Society of Chemistry (RSC). <a href=\"https://doi.org/10.1039/c0sm01143f\">https://doi.org/10.1039/c0sm01143f</a>","ista":"Šarić A, Cacciuto A. 2010. Particle self-assembly on soft elastic shells. Soft Matter. 7(5), 1874–1878.","short":"A. Šarić, A. Cacciuto, Soft Matter 7 (2010) 1874–1878.","ieee":"A. Šarić and A. Cacciuto, “Particle self-assembly on soft elastic shells,” <i>Soft Matter</i>, vol. 7, no. 5. Royal Society of Chemistry (RSC), pp. 1874–1878, 2010.","mla":"Šarić, Anđela, and Angelo Cacciuto. “Particle Self-Assembly on Soft Elastic Shells.” <i>Soft Matter</i>, vol. 7, no. 5, Royal Society of Chemistry (RSC), 2010, pp. 1874–78, doi:<a href=\"https://doi.org/10.1039/c0sm01143f\">10.1039/c0sm01143f</a>.","ama":"Šarić A, Cacciuto A. Particle self-assembly on soft elastic shells. <i>Soft Matter</i>. 2010;7(5):1874-1878. doi:<a href=\"https://doi.org/10.1039/c0sm01143f\">10.1039/c0sm01143f</a>","chicago":"Šarić, Anđela, and Angelo Cacciuto. “Particle Self-Assembly on Soft Elastic Shells.” <i>Soft Matter</i>. Royal Society of Chemistry (RSC), 2010. <a href=\"https://doi.org/10.1039/c0sm01143f\">https://doi.org/10.1039/c0sm01143f</a>."},"main_file_link":[{"url":"https://arxiv.org/abs/1010.2453","open_access":"1"}],"issue":"5","publication_identifier":{"issn":["1744-683X","1744-6848"]},"article_processing_charge":"No","publisher":"Royal Society of Chemistry (RSC)","doi":"10.1039/c0sm01143f","date_updated":"2021-10-12T09:49:27Z","publication":"Soft Matter","month":"12","quality_controlled":"1","oa":1,"extern":"1","date_published":"2010-12-23T00:00:00Z","type":"journal_article","volume":7,"oa_version":"Preprint","external_id":{"arxiv":["1010.2453"]},"article_type":"original","language":[{"iso":"eng"}],"year":"2010","keyword":["condensed matter physics","general chemistry"],"author":[{"last_name":"Šarić","orcid":"0000-0002-7854-2139","first_name":"Anđela","id":"bf63d406-f056-11eb-b41d-f263a6566d8b","full_name":"Šarić, Anđela"},{"last_name":"Cacciuto","first_name":"Angelo","full_name":"Cacciuto, Angelo"}],"page":"1874-1878","arxiv":1,"date_created":"2021-10-12T08:34:23Z","day":"23","publication_status":"published"},{"title":"Quantum mechanical study of secondary structure formation in protected dipeptides","_id":"10128","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","abstract":[{"text":"An extensive computational study of the conformational preferences of three capped dipeptides: Ac-Xxx-Phe-NH2, Xxx = Gly, Ala, Val is reported. On the basis of local second-order Møller–Plesset perturbation theory (LMP2) and DFT computations we were able to identify the experimentally observed conformers as γL–γL(g−) and β-turn I(g+) in Ac-Gly-Phe-NH2, and Ac-Ala-Phe-NH2, and as the closely related γL(g+)–γL(g−) and β-turn I(a,g+) in Ac-Val-Phe-NH2. In contrast to the experimental observation that peptides with bulky side chain have a propensity for β-turns, we show that in Ac-Val-Phe-NH2 the minimum energy structure corresponds to the experimentally non detected β-strand.","lang":"eng"}],"acknowledgement":"This work has been supported by the MZOŠ projects 098-0352851-2921 and 119-1191342-2959.","pmid":1,"status":"public","citation":{"short":"A. Šarić, T. Hrenar, M. Mališ, N. Došlić, Physical Chemistry Chemical Physics 12 (2010) 4678–4685.","ieee":"A. Šarić, T. Hrenar, M. Mališ, and N. Došlić, “Quantum mechanical study of secondary structure formation in protected dipeptides,” <i>Physical Chemistry Chemical Physics</i>, vol. 12, no. 18. Royal Society of Chemistry , pp. 4678–4685, 2010.","apa":"Šarić, A., Hrenar, T., Mališ, M., &#38; Došlić, N. (2010). Quantum mechanical study of secondary structure formation in protected dipeptides. <i>Physical Chemistry Chemical Physics</i>. Royal Society of Chemistry . <a href=\"https://doi.org/10.1039/b923041f\">https://doi.org/10.1039/b923041f</a>","ista":"Šarić A, Hrenar T, Mališ M, Došlić N. 2010. Quantum mechanical study of secondary structure formation in protected dipeptides. Physical Chemistry Chemical Physics. 12(18), 4678–4685.","chicago":"Šarić, Anđela, T. Hrenar, M. Mališ, and N. Došlić. “Quantum Mechanical Study of Secondary Structure Formation in Protected Dipeptides.” <i>Physical Chemistry Chemical Physics</i>. Royal Society of Chemistry , 2010. <a href=\"https://doi.org/10.1039/b923041f\">https://doi.org/10.1039/b923041f</a>.","mla":"Šarić, Anđela, et al. “Quantum Mechanical Study of Secondary Structure Formation in Protected Dipeptides.” <i>Physical Chemistry Chemical Physics</i>, vol. 12, no. 18, Royal Society of Chemistry , 2010, pp. 4678–85, doi:<a href=\"https://doi.org/10.1039/b923041f\">10.1039/b923041f</a>.","ama":"Šarić A, Hrenar T, Mališ M, Došlić N. Quantum mechanical study of secondary structure formation in protected dipeptides. <i>Physical Chemistry Chemical Physics</i>. 2010;12(18):4678-4685. doi:<a href=\"https://doi.org/10.1039/b923041f\">10.1039/b923041f</a>"},"intvolume":"        12","main_file_link":[{"url":"https://europepmc.org/article/med/20428547"}],"issue":"18","publication_identifier":{"issn":["1463-9076","1463-9084"]},"publisher":"Royal Society of Chemistry ","doi":"10.1039/b923041f","date_updated":"2021-10-12T09:49:22Z","publication":"Physical Chemistry Chemical Physics","article_processing_charge":"No","quality_controlled":"1","extern":"1","month":"03","type":"journal_article","date_published":"2010-03-16T00:00:00Z","volume":12,"oa_version":"None","external_id":{"pmid":["20428547"]},"article_type":"original","language":[{"iso":"eng"}],"year":"2010","page":"4678-4685","keyword":["Physical and Theoretical Chemistry","General Physics and Astronomy"],"author":[{"last_name":"Šarić","orcid":"0000-0002-7854-2139","id":"bf63d406-f056-11eb-b41d-f263a6566d8b","first_name":"Anđela","full_name":"Šarić, Anđela"},{"first_name":"T.","full_name":"Hrenar, T.","last_name":"Hrenar"},{"full_name":"Mališ, M.","first_name":"M.","last_name":"Mališ"},{"last_name":"Došlić","full_name":"Došlić, N.","first_name":"N."}],"day":"16","publication_status":"published","date_created":"2021-10-12T08:44:34Z"},{"scopus_import":"1","publication_identifier":{"eissn":["1079-7114"],"issn":["0031-9007"]},"issue":"22","pmid":1,"acknowledgement":"This work was supported by the National Science Foundation under Career Grant No. DMR-0846426.","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","abstract":[{"text":"We use numerical simulations to show how a fully flexible filament binding to a deformable cylindrical surface may acquire a macroscopic persistence length and a helical conformation. This is a result of the nontrivial elastic response to deformations of elastic sheets. We find that the filament’s helical pitch is completely determined by the mechanical properties of the surface, and can be easily tuned by varying the surface stretching rigidity. We propose simple scaling arguments to understand the physical mechanism behind this phenomenon and present a phase diagram indicating under what conditions one should expect a fully flexible chain to behave as a helical semiflexible filament. Finally, we discuss the implications of our results.","lang":"eng"}],"title":"Effective elasticity of a flexible filament bound to a deformable cylindrical surface","_id":"10391","citation":{"ama":"Šarić A, Pàmies JC, Cacciuto A. Effective elasticity of a flexible filament bound to a deformable cylindrical surface. <i>Physical Review Letters</i>. 2010;104(22). doi:<a href=\"https://doi.org/10.1103/physrevlett.104.226101\">10.1103/physrevlett.104.226101</a>","mla":"Šarić, Anđela, et al. “Effective Elasticity of a Flexible Filament Bound to a Deformable Cylindrical Surface.” <i>Physical Review Letters</i>, vol. 104, no. 22, 226101, American Physical Society, 2010, doi:<a href=\"https://doi.org/10.1103/physrevlett.104.226101\">10.1103/physrevlett.104.226101</a>.","chicago":"Šarić, Anđela, Josep C. Pàmies, and Angelo Cacciuto. “Effective Elasticity of a Flexible Filament Bound to a Deformable Cylindrical Surface.” <i>Physical Review Letters</i>. American Physical Society, 2010. <a href=\"https://doi.org/10.1103/physrevlett.104.226101\">https://doi.org/10.1103/physrevlett.104.226101</a>.","ista":"Šarić A, Pàmies JC, Cacciuto A. 2010. Effective elasticity of a flexible filament bound to a deformable cylindrical surface. Physical Review Letters. 104(22), 226101.","apa":"Šarić, A., Pàmies, J. C., &#38; Cacciuto, A. (2010). Effective elasticity of a flexible filament bound to a deformable cylindrical surface. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physrevlett.104.226101\">https://doi.org/10.1103/physrevlett.104.226101</a>","ieee":"A. Šarić, J. C. Pàmies, and A. Cacciuto, “Effective elasticity of a flexible filament bound to a deformable cylindrical surface,” <i>Physical Review Letters</i>, vol. 104, no. 22. American Physical Society, 2010.","short":"A. Šarić, J.C. Pàmies, A. Cacciuto, Physical Review Letters 104 (2010)."},"intvolume":"       104","main_file_link":[{"url":"https://arxiv.org/abs/1005.2429","open_access":"1"}],"status":"public","language":[{"iso":"eng"}],"year":"2010","date_created":"2021-11-29T15:14:33Z","arxiv":1,"day":"03","publication_status":"published","author":[{"full_name":"Šarić, Anđela","id":"bf63d406-f056-11eb-b41d-f263a6566d8b","first_name":"Anđela","last_name":"Šarić","orcid":"0000-0002-7854-2139"},{"last_name":"Pàmies","full_name":"Pàmies, Josep C.","first_name":"Josep C."},{"last_name":"Cacciuto","first_name":"Angelo","full_name":"Cacciuto, Angelo"}],"keyword":["general physics and astronomy"],"month":"06","oa":1,"quality_controlled":"1","article_number":"226101","extern":"1","article_processing_charge":"No","date_updated":"2021-11-30T08:11:19Z","publisher":"American Physical Society","doi":"10.1103/physrevlett.104.226101","publication":"Physical Review Letters","article_type":"original","oa_version":"Preprint","external_id":{"pmid":["20867183"],"arxiv":["1005.2429"]},"date_published":"2010-06-03T00:00:00Z","type":"journal_article","volume":104},{"pmid":1,"abstract":[{"lang":"eng","text":"The reversible molecular template-directed self-assembly of gold nanoparticles (AuNPs), a process which relies solely on noncovalent bonding interactions, has been demonstrated by high-resolution transmission electron microscopy (HR-TEM). By employing a well-known host−guest binding motif, the AuNPs have been systemized into discrete dimers, trimers, and tetramers. These nanoparticulate twins, triplets, and quadruplets, which can be disassembled and reassembled either chemically or electrochemically, can be coalesced into larger, permanent polygonal structures by thermal treatment using a focused HR-TEM electron beam."}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"13416","title":"Assembly of polygonal nanoparticle clusters directed by reversible noncovalent bonding interactions","intvolume":"         9","citation":{"ama":"Olson MA, Coskun A, Klajn R, et al. Assembly of polygonal nanoparticle clusters directed by reversible noncovalent bonding interactions. <i>Nano Letters</i>. 2009;9(9):3185-3190. doi:<a href=\"https://doi.org/10.1021/nl901385c\">10.1021/nl901385c</a>","mla":"Olson, Mark A., et al. “Assembly of Polygonal Nanoparticle Clusters Directed by Reversible Noncovalent Bonding Interactions.” <i>Nano Letters</i>, vol. 9, no. 9, American Chemical Society, 2009, pp. 3185–90, doi:<a href=\"https://doi.org/10.1021/nl901385c\">10.1021/nl901385c</a>.","chicago":"Olson, Mark A., Ali Coskun, Rafal Klajn, Lei Fang, Sanjeev K. Dey, Kevin P. Browne, Bartosz A. Grzybowski, and J. Fraser Stoddart. “Assembly of Polygonal Nanoparticle Clusters Directed by Reversible Noncovalent Bonding Interactions.” <i>Nano Letters</i>. American Chemical Society, 2009. <a href=\"https://doi.org/10.1021/nl901385c\">https://doi.org/10.1021/nl901385c</a>.","ista":"Olson MA, Coskun A, Klajn R, Fang L, Dey SK, Browne KP, Grzybowski BA, Stoddart JF. 2009. Assembly of polygonal nanoparticle clusters directed by reversible noncovalent bonding interactions. Nano Letters. 9(9), 3185–3190.","apa":"Olson, M. A., Coskun, A., Klajn, R., Fang, L., Dey, S. K., Browne, K. P., … Stoddart, J. F. (2009). Assembly of polygonal nanoparticle clusters directed by reversible noncovalent bonding interactions. <i>Nano Letters</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/nl901385c\">https://doi.org/10.1021/nl901385c</a>","short":"M.A. Olson, A. Coskun, R. Klajn, L. Fang, S.K. Dey, K.P. Browne, B.A. Grzybowski, J.F. Stoddart, Nano Letters 9 (2009) 3185–3190.","ieee":"M. A. Olson <i>et al.</i>, “Assembly of polygonal nanoparticle clusters directed by reversible noncovalent bonding interactions,” <i>Nano Letters</i>, vol. 9, no. 9. American Chemical Society, pp. 3185–3190, 2009."},"status":"public","scopus_import":"1","publication_identifier":{"issn":["1530-6984"],"eissn":["1530-6992"]},"issue":"9","month":"09","extern":"1","quality_controlled":"1","article_processing_charge":"No","publication":"Nano Letters","publisher":"American Chemical Society","date_updated":"2023-08-08T08:57:34Z","doi":"10.1021/nl901385c","external_id":{"pmid":["19694461"]},"oa_version":"None","article_type":"original","volume":9,"date_published":"2009-09-09T00:00:00Z","type":"journal_article","language":[{"iso":"eng"}],"year":"2009","date_created":"2023-08-01T10:29:27Z","publication_status":"published","day":"09","keyword":["Mechanical Engineering","Condensed Matter Physics","General Materials Science","General Chemistry","Bioengineering"],"author":[{"first_name":"Mark A.","full_name":"Olson, Mark A.","last_name":"Olson"},{"full_name":"Coskun, Ali","first_name":"Ali","last_name":"Coskun"},{"last_name":"Klajn","first_name":"Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","full_name":"Klajn, Rafal"},{"last_name":"Fang","full_name":"Fang, Lei","first_name":"Lei"},{"full_name":"Dey, Sanjeev K.","first_name":"Sanjeev K.","last_name":"Dey"},{"last_name":"Browne","first_name":"Kevin P.","full_name":"Browne, Kevin P."},{"full_name":"Grzybowski, Bartosz A.","first_name":"Bartosz A.","last_name":"Grzybowski"},{"first_name":"J. Fraser","full_name":"Stoddart, J. Fraser","last_name":"Stoddart"}],"page":"3185-3190"},{"article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","abstract":[{"text":"The SOFAST-HMQC experiment [P. Schanda, B. Brutscher, Very fast two-dimensional NMR spectroscopy for real-time investigation of dynamic events in proteins on the time scale of seconds, J. Am. Chem. Soc. 127 (2005) 8014–8015] allows recording two-dimensional correlation spectra of macromolecules such as proteins in only a few seconds acquisition time. To achieve the highest possible sensitivity, SOFAST-HMQC experiments are preferably performed on high-field NMR spectrometers equipped with cryogenically cooled probes. The duty cycle of over 80% in fast-pulsing SOFAST-HMQC experiments, however, may cause problems when using a cryogenic probe. Here we introduce SE-IPAP-SOFAST-HMQC, a new pulse sequence that provides comparable sensitivity to standard SOFAST-HMQC, while avoiding heteronuclear decoupling during 1H detection, and thus significantly reducing the radiofrequency load of the probe during the experiment. The experiment is also attractive for fast and sensitive measurement of heteronuclear one-bond spin coupling constants.","lang":"eng"}],"title":"Sensitivity-enhanced IPAP-SOFAST-HMQC for fast-pulsing 2D NMR with reduced radiofrequency load","doi":"10.1016/j.jmr.2007.11.015","date_updated":"2021-01-12T08:19:35Z","publisher":"Elsevier","publication":"Journal of Magnetic Resonance","_id":"8482","month":"02","quality_controlled":"1","extern":"1","type":"journal_article","date_published":"2008-02-01T00:00:00Z","volume":190,"status":"public","article_type":"letter_note","oa_version":"None","citation":{"ama":"Kern T, Schanda P, Brutscher B. Sensitivity-enhanced IPAP-SOFAST-HMQC for fast-pulsing 2D NMR with reduced radiofrequency load. <i>Journal of Magnetic Resonance</i>. 2008;190(2):333-338. doi:<a href=\"https://doi.org/10.1016/j.jmr.2007.11.015\">10.1016/j.jmr.2007.11.015</a>","mla":"Kern, Thomas, et al. “Sensitivity-Enhanced IPAP-SOFAST-HMQC for Fast-Pulsing 2D NMR with Reduced Radiofrequency Load.” <i>Journal of Magnetic Resonance</i>, vol. 190, no. 2, Elsevier, 2008, pp. 333–38, doi:<a href=\"https://doi.org/10.1016/j.jmr.2007.11.015\">10.1016/j.jmr.2007.11.015</a>.","chicago":"Kern, Thomas, Paul Schanda, and Bernhard Brutscher. “Sensitivity-Enhanced IPAP-SOFAST-HMQC for Fast-Pulsing 2D NMR with Reduced Radiofrequency Load.” <i>Journal of Magnetic Resonance</i>. Elsevier, 2008. <a href=\"https://doi.org/10.1016/j.jmr.2007.11.015\">https://doi.org/10.1016/j.jmr.2007.11.015</a>.","ista":"Kern T, Schanda P, Brutscher B. 2008. Sensitivity-enhanced IPAP-SOFAST-HMQC for fast-pulsing 2D NMR with reduced radiofrequency load. Journal of Magnetic Resonance. 190(2), 333–338.","apa":"Kern, T., Schanda, P., &#38; Brutscher, B. (2008). Sensitivity-enhanced IPAP-SOFAST-HMQC for fast-pulsing 2D NMR with reduced radiofrequency load. <i>Journal of Magnetic Resonance</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jmr.2007.11.015\">https://doi.org/10.1016/j.jmr.2007.11.015</a>","short":"T. Kern, P. Schanda, B. Brutscher, Journal of Magnetic Resonance 190 (2008) 333–338.","ieee":"T. Kern, P. Schanda, and B. Brutscher, “Sensitivity-enhanced IPAP-SOFAST-HMQC for fast-pulsing 2D NMR with reduced radiofrequency load,” <i>Journal of Magnetic Resonance</i>, vol. 190, no. 2. Elsevier, pp. 333–338, 2008."},"intvolume":"       190","language":[{"iso":"eng"}],"year":"2008","issue":"2","author":[{"last_name":"Kern","first_name":"Thomas","full_name":"Kern, Thomas"},{"full_name":"Schanda, Paul","first_name":"Paul","id":"7B541462-FAF6-11E9-A490-E8DFE5697425","last_name":"Schanda","orcid":"0000-0002-9350-7606"},{"first_name":"Bernhard","full_name":"Brutscher, Bernhard","last_name":"Brutscher"}],"keyword":["Nuclear and High Energy Physics","Biophysics","Biochemistry","Condensed Matter Physics"],"page":"333-338","date_created":"2020-09-18T10:12:46Z","publication_identifier":{"issn":["1090-7807"]},"day":"01","publication_status":"published"},{"oa_version":"None","article_type":"original","volume":18,"type":"journal_article","date_published":"2008-09-23T00:00:00Z","extern":"1","quality_controlled":"1","month":"09","publication":"Advanced Functional Materials","date_updated":"2023-08-08T11:16:28Z","publisher":"Wiley","doi":"10.1002/adfm.200800293","article_processing_charge":"No","publication_status":"published","day":"23","date_created":"2023-08-01T10:30:57Z","page":"2763-2769","keyword":["Electrochemistry","Condensed Matter Physics","Biomaterials","Electronic","Optical and Magnetic Materials"],"author":[{"last_name":"Klajn","full_name":"Klajn, Rafal","first_name":"Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b"},{"full_name":"Gray, Timothy P.","first_name":"Timothy P.","last_name":"Gray"},{"last_name":"Wesson","full_name":"Wesson, Paul J.","first_name":"Paul J."},{"first_name":"Benjamin D.","full_name":"Myers, Benjamin D.","last_name":"Myers"},{"full_name":"Dravid, Vinayak P.","first_name":"Vinayak P.","last_name":"Dravid"},{"last_name":"Smoukov","first_name":"Stoyan K.","full_name":"Smoukov, Stoyan K."},{"last_name":"Grzybowski","first_name":"Bartosz A.","full_name":"Grzybowski, Bartosz A."}],"language":[{"iso":"eng"}],"year":"2008","citation":{"apa":"Klajn, R., Gray, T. P., Wesson, P. J., Myers, B. D., Dravid, V. P., Smoukov, S. K., &#38; Grzybowski, B. A. (2008). Bulk synthesis and surface patterning of nanoporous metals and alloys from supraspherical nanoparticle aggregates. <i>Advanced Functional Materials</i>. Wiley. <a href=\"https://doi.org/10.1002/adfm.200800293\">https://doi.org/10.1002/adfm.200800293</a>","ista":"Klajn R, Gray TP, Wesson PJ, Myers BD, Dravid VP, Smoukov SK, Grzybowski BA. 2008. Bulk synthesis and surface patterning of nanoporous metals and alloys from supraspherical nanoparticle aggregates. Advanced Functional Materials. 18(18), 2763–2769.","short":"R. Klajn, T.P. Gray, P.J. Wesson, B.D. Myers, V.P. Dravid, S.K. Smoukov, B.A. Grzybowski, Advanced Functional Materials 18 (2008) 2763–2769.","ieee":"R. Klajn <i>et al.</i>, “Bulk synthesis and surface patterning of nanoporous metals and alloys from supraspherical nanoparticle aggregates,” <i>Advanced Functional Materials</i>, vol. 18, no. 18. Wiley, pp. 2763–2769, 2008.","mla":"Klajn, Rafal, et al. “Bulk Synthesis and Surface Patterning of Nanoporous Metals and Alloys from Supraspherical Nanoparticle Aggregates.” <i>Advanced Functional Materials</i>, vol. 18, no. 18, Wiley, 2008, pp. 2763–69, doi:<a href=\"https://doi.org/10.1002/adfm.200800293\">10.1002/adfm.200800293</a>.","ama":"Klajn R, Gray TP, Wesson PJ, et al. Bulk synthesis and surface patterning of nanoporous metals and alloys from supraspherical nanoparticle aggregates. <i>Advanced Functional Materials</i>. 2008;18(18):2763-2769. doi:<a href=\"https://doi.org/10.1002/adfm.200800293\">10.1002/adfm.200800293</a>","chicago":"Klajn, Rafal, Timothy P. Gray, Paul J. Wesson, Benjamin D. Myers, Vinayak P. Dravid, Stoyan K. Smoukov, and Bartosz A. Grzybowski. “Bulk Synthesis and Surface Patterning of Nanoporous Metals and Alloys from Supraspherical Nanoparticle Aggregates.” <i>Advanced Functional Materials</i>. Wiley, 2008. <a href=\"https://doi.org/10.1002/adfm.200800293\">https://doi.org/10.1002/adfm.200800293</a>."},"intvolume":"        18","status":"public","_id":"13423","title":"Bulk synthesis and surface patterning of nanoporous metals and alloys from supraspherical nanoparticle aggregates","abstract":[{"text":"Supraspheres (SS) composed of hundreds to thousands of metal nanoparticles (NPs) and crosslinked by dithiol linkers are assembled into larger structures, which are subsequently converted into nanoporous metals (NMs). Conversion is achieved by heating which removes organic molecules stabilizing the NPs and allows for NP fusion. Heating of SS solutions leads to NMs of overall macroscopic dimensions; localized radiation using collimated electron beam is used to prepare metallized surface micropatterns. Depending on the composition of supraspherical precursors, nanoporous materials composed of up to three metals can be obtained. Strategies for controlling pore size and nanoscale surface roughness of these materials are discussed.","lang":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_identifier":{"eissn":["1616-3028"],"issn":["1616-301X"]},"issue":"18","scopus_import":"1"},{"publication_identifier":{"issn":["0022-1120","1469-7645"]},"status":"public","citation":{"chicago":"Bühler, Oliver, and Caroline J Muller. “Instability and Focusing of Internal Tides in the Deep Ocean.” <i>Journal of Fluid Mechanics</i>. Cambridge University Press, 2007. <a href=\"https://doi.org/10.1017/s0022112007007410\">https://doi.org/10.1017/s0022112007007410</a>.","mla":"Bühler, Oliver, and Caroline J. Muller. “Instability and Focusing of Internal Tides in the Deep Ocean.” <i>Journal of Fluid Mechanics</i>, vol. 588, Cambridge University Press, 2007, pp. 1–28, doi:<a href=\"https://doi.org/10.1017/s0022112007007410\">10.1017/s0022112007007410</a>.","ama":"Bühler O, Muller CJ. Instability and focusing of internal tides in the deep ocean. <i>Journal of Fluid Mechanics</i>. 2007;588:1-28. doi:<a href=\"https://doi.org/10.1017/s0022112007007410\">10.1017/s0022112007007410</a>","short":"O. Bühler, C.J. Muller, Journal of Fluid Mechanics 588 (2007) 1–28.","ieee":"O. Bühler and C. J. Muller, “Instability and focusing of internal tides in the deep ocean,” <i>Journal of Fluid Mechanics</i>, vol. 588. Cambridge University Press, pp. 1–28, 2007.","apa":"Bühler, O., &#38; Muller, C. J. (2007). Instability and focusing of internal tides in the deep ocean. <i>Journal of Fluid Mechanics</i>. Cambridge University Press. <a href=\"https://doi.org/10.1017/s0022112007007410\">https://doi.org/10.1017/s0022112007007410</a>","ista":"Bühler O, Muller CJ. 2007. Instability and focusing of internal tides in the deep ocean. Journal of Fluid Mechanics. 588, 1–28."},"intvolume":"       588","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1017/S0022112007007410"}],"title":"Instability and focusing of internal tides in the deep ocean","_id":"9149","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","abstract":[{"lang":"eng","text":"The interaction of tidal currents with sea-floor topography results in the radiation of internal gravity waves into the ocean interior. These waves are called internal tides and their dissipation due to nonlinear wave breaking and concomitant three-dimensional turbulence could play an important role in the mixing of the abyssal ocean, and hence in controlling the large-scale ocean circulation.\r\nAs part of on-going work aimed at providing a theory for the vertical distribution of wave breaking over sea-floor topography, in this paper we investigate the instability of internal tides in a very simple linear model that helps us to relate the formation of unstable regions to simple features in the sea-floor topography. For two-dimensional tides over one-dimensional topography we find that the formation of overturning instabilities is closely linked to the singularities in the topography shape and that it is possible to have stable waves at the sea floor and unstable waves in the ocean interior above.\r\nFor three-dimensional tides over two-dimensional topography there is in addition an effect of geometric focusing of wave energy into localized regions of high wave amplitude, and we investigate this focusing effect in simple examples. Overall, we find that the distribution of unstable wave breaking regions can be highly non-uniform even for very simple idealized topography shapes."}],"page":"1-28","keyword":["mechanical engineering","mechanics of materials","condensed matter physics"],"author":[{"last_name":"Bühler","full_name":"Bühler, Oliver","first_name":"Oliver"},{"last_name":"Muller","orcid":"0000-0001-5836-5350","full_name":"Muller, Caroline J","id":"f978ccb0-3f7f-11eb-b193-b0e2bd13182b","first_name":"Caroline J"}],"day":"10","publication_status":"published","date_created":"2021-02-15T14:41:45Z","year":"2007","language":[{"iso":"eng"}],"type":"journal_article","date_published":"2007-10-10T00:00:00Z","volume":588,"oa_version":"None","article_type":"original","doi":"10.1017/s0022112007007410","publisher":"Cambridge University Press","date_updated":"2022-01-24T13:43:36Z","publication":"Journal of Fluid Mechanics","article_processing_charge":"No","quality_controlled":"1","oa":1,"extern":"1","month":"10"},{"title":"Multilevel surface nano- and microstructuring via sequential photoswelling of dichromated gelatin","_id":"13426","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","abstract":[{"lang":"eng","text":"Photoswelling of thin films of dichromated gelatin provides a basis for fabrication of multilevel surface reliefs via sequential UV illumination through different photomasks. The remarkable feature of this simple, benchtop technique is that by adjusting irradiation times, film thickness, or its hydration state the heights of the developed features can be varied from few nanometers to tens of microns. After UV exposure, the surface structures can be replicated faithfully into either soft or hard PDMS stamps."}],"pmid":1,"status":"public","citation":{"ieee":"M. Paszewski, S. K. Smoukov, R. Klajn, and B. A. Grzybowski, “Multilevel surface nano- and microstructuring via sequential photoswelling of dichromated gelatin,” <i>Langmuir</i>, vol. 23, no. 10. American Chemical Society, pp. 5419–5422, 2007.","short":"M. Paszewski, S.K. Smoukov, R. Klajn, B.A. Grzybowski, Langmuir 23 (2007) 5419–5422.","apa":"Paszewski, M., Smoukov, S. K., Klajn, R., &#38; Grzybowski, B. A. (2007). Multilevel surface nano- and microstructuring via sequential photoswelling of dichromated gelatin. <i>Langmuir</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/la062982c\">https://doi.org/10.1021/la062982c</a>","ista":"Paszewski M, Smoukov SK, Klajn R, Grzybowski BA. 2007. Multilevel surface nano- and microstructuring via sequential photoswelling of dichromated gelatin. Langmuir. 23(10), 5419–5422.","chicago":"Paszewski, Maciej, Stoyan K. Smoukov, Rafal Klajn, and Bartosz A. Grzybowski. “Multilevel Surface Nano- and Microstructuring via Sequential Photoswelling of Dichromated Gelatin.” <i>Langmuir</i>. American Chemical Society, 2007. <a href=\"https://doi.org/10.1021/la062982c\">https://doi.org/10.1021/la062982c</a>.","mla":"Paszewski, Maciej, et al. “Multilevel Surface Nano- and Microstructuring via Sequential Photoswelling of Dichromated Gelatin.” <i>Langmuir</i>, vol. 23, no. 10, American Chemical Society, 2007, pp. 5419–22, doi:<a href=\"https://doi.org/10.1021/la062982c\">10.1021/la062982c</a>.","ama":"Paszewski M, Smoukov SK, Klajn R, Grzybowski BA. Multilevel surface nano- and microstructuring via sequential photoswelling of dichromated gelatin. <i>Langmuir</i>. 2007;23(10):5419-5422. doi:<a href=\"https://doi.org/10.1021/la062982c\">10.1021/la062982c</a>"},"intvolume":"        23","scopus_import":"1","issue":"10","publication_identifier":{"issn":["0743-7463"],"eissn":["1520-5827"]},"publisher":"American Chemical Society","doi":"10.1021/la062982c","date_updated":"2023-08-08T11:26:24Z","publication":"Langmuir","article_processing_charge":"No","quality_controlled":"1","extern":"1","month":"04","type":"journal_article","date_published":"2007-04-11T00:00:00Z","volume":23,"external_id":{"pmid":["17425340"]},"article_type":"original","oa_version":"None","language":[{"iso":"eng"}],"year":"2007","page":"5419-5422","author":[{"last_name":"Paszewski","first_name":"Maciej","full_name":"Paszewski, Maciej"},{"last_name":"Smoukov","first_name":"Stoyan K.","full_name":"Smoukov, Stoyan K."},{"last_name":"Klajn","full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","first_name":"Rafal"},{"first_name":"Bartosz A.","full_name":"Grzybowski, Bartosz A.","last_name":"Grzybowski"}],"keyword":["Electrochemistry","Spectroscopy","Surfaces and Interfaces","Condensed Matter Physics","General Materials Science"],"day":"11","publication_status":"published","date_created":"2023-08-01T10:31:33Z"},{"article_type":"original","oa_version":"None","citation":{"apa":"Schanda, P., &#38; Brutscher, B. (2006). Hadamard frequency-encoded SOFAST-HMQC for ultrafast two-dimensional protein NMR. <i>Journal of Magnetic Resonance</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jmr.2005.10.007\">https://doi.org/10.1016/j.jmr.2005.10.007</a>","ista":"Schanda P, Brutscher B. 2006. Hadamard frequency-encoded SOFAST-HMQC for ultrafast two-dimensional protein NMR. Journal of Magnetic Resonance. 178(2), 334–339.","ieee":"P. Schanda and B. Brutscher, “Hadamard frequency-encoded SOFAST-HMQC for ultrafast two-dimensional protein NMR,” <i>Journal of Magnetic Resonance</i>, vol. 178, no. 2. Elsevier, pp. 334–339, 2006.","short":"P. Schanda, B. Brutscher, Journal of Magnetic Resonance 178 (2006) 334–339.","mla":"Schanda, Paul, and Bernhard Brutscher. “Hadamard Frequency-Encoded SOFAST-HMQC for Ultrafast Two-Dimensional Protein NMR.” <i>Journal of Magnetic Resonance</i>, vol. 178, no. 2, Elsevier, 2006, pp. 334–39, doi:<a href=\"https://doi.org/10.1016/j.jmr.2005.10.007\">10.1016/j.jmr.2005.10.007</a>.","ama":"Schanda P, Brutscher B. Hadamard frequency-encoded SOFAST-HMQC for ultrafast two-dimensional protein NMR. <i>Journal of Magnetic Resonance</i>. 2006;178(2):334-339. doi:<a href=\"https://doi.org/10.1016/j.jmr.2005.10.007\">10.1016/j.jmr.2005.10.007</a>","chicago":"Schanda, Paul, and Bernhard Brutscher. “Hadamard Frequency-Encoded SOFAST-HMQC for Ultrafast Two-Dimensional Protein NMR.” <i>Journal of Magnetic Resonance</i>. Elsevier, 2006. <a href=\"https://doi.org/10.1016/j.jmr.2005.10.007\">https://doi.org/10.1016/j.jmr.2005.10.007</a>."},"intvolume":"       178","volume":178,"date_published":"2006-02-01T00:00:00Z","type":"journal_article","status":"public","month":"02","extern":"1","abstract":[{"text":"We demonstrate the feasibility of recording 1H–15N correlation spectra of proteins in only one second of acquisition time. The experiment combines recently proposed SOFAST-HMQC with Hadamard-type 15N frequency encoding. This allows site-resolved real-time NMR studies of kinetic processes in proteins with an increased time resolution. The sensitivity of the experiment is sufficient to be applicable to a wide range of molecular systems available at millimolar concentration on a high magnetic field spectrometer.","lang":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","publication":"Journal of Magnetic Resonance","_id":"8490","publisher":"Elsevier","doi":"10.1016/j.jmr.2005.10.007","title":"Hadamard frequency-encoded SOFAST-HMQC for ultrafast two-dimensional protein NMR","date_updated":"2021-01-12T08:19:38Z","publication_identifier":{"issn":["1090-7807"]},"date_created":"2020-09-18T10:13:51Z","publication_status":"published","day":"01","author":[{"first_name":"Paul","id":"7B541462-FAF6-11E9-A490-E8DFE5697425","full_name":"Schanda, Paul","last_name":"Schanda","orcid":"0000-0002-9350-7606"},{"last_name":"Brutscher","first_name":"Bernhard","full_name":"Brutscher, Bernhard"}],"keyword":["Nuclear and High Energy Physics","Biophysics","Biochemistry","Condensed Matter Physics"],"issue":"2","page":"334-339","language":[{"iso":"eng"}],"year":"2006"}]