---
_id: '14530'
abstract:
- lang: eng
  text: 'Most motions of many-body systems at any scale in nature with sufficient
    degrees of freedom tend to be chaotic; reaching from the orbital motion of planets,
    the air currents in our atmosphere, down to the water flowing through our pipelines
    or the movement of a population of bacteria. To the observer it is therefore intriguing
    when a moving collective exhibits order. Collective motion of flocks of birds,
    schools of fish or swarms of self-propelled particles or robots have been studied
    extensively over the past decades but the mechanisms involved in the transition
    from chaos to order remain unclear. Here, the interactions, that in most systems
    give rise to chaos, sustain order.  In this thesis we investigate mechanisms that
    preserve, destabilize or lead to the ordered state. We show that endothelial cells
    migrating in circular confinements transition to a collective rotating state and
    concomitantly synchronize the frequencies of nucleating actin waves within individual
    cells. Consequently, the frequency dependent cell migration speed uniformizes
    across the population. Complementary to the WAVE dependent nucleation of traveling
    actin waves, we show that in leukocytes the actin polymerization depending on
    WASp generates pushing forces locally at stationary patches. Next, in pipe flows,
    we study methods to disrupt the self--sustaining cycle of turbulence and therefore
    relaminarize the flow. While we find in pulsating flow conditions that turbulence
    emerges through a helical instability during the decelerating phase. Finally,
    we show quantitatively in brain slices of mice that wild-type control neurons
    can compensate the migratory deficits of a genetically modified neuronal sub--population
    in the developing cortex.  '
acknowledged_ssus:
- _id: M-Shop
- _id: Bio
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Michael
  full_name: Riedl, Michael
  id: 3BE60946-F248-11E8-B48F-1D18A9856A87
  last_name: Riedl
  orcid: 0000-0003-4844-6311
citation:
  ama: Riedl M. Synchronization in collectively moving active matter. 2023. doi:<a
    href="https://doi.org/10.15479/14530">10.15479/14530</a>
  apa: Riedl, M. (2023). <i>Synchronization in collectively moving active matter</i>.
    Institute of Science and Technology Austria. <a href="https://doi.org/10.15479/14530">https://doi.org/10.15479/14530</a>
  chicago: Riedl, Michael. “Synchronization in Collectively Moving Active Matter.”
    Institute of Science and Technology Austria, 2023. <a href="https://doi.org/10.15479/14530">https://doi.org/10.15479/14530</a>.
  ieee: M. Riedl, “Synchronization in collectively moving active matter,” Institute
    of Science and Technology Austria, 2023.
  ista: Riedl M. 2023. Synchronization in collectively moving active matter. Institute
    of Science and Technology Austria.
  mla: Riedl, Michael. <i>Synchronization in Collectively Moving Active Matter</i>.
    Institute of Science and Technology Austria, 2023, doi:<a href="https://doi.org/10.15479/14530">10.15479/14530</a>.
  short: M. Riedl, Synchronization in Collectively Moving Active Matter, Institute
    of Science and Technology Austria, 2023.
date_created: 2023-11-15T09:59:03Z
date_published: 2023-11-16T00:00:00Z
date_updated: 2023-11-30T10:55:13Z
day: '16'
ddc:
- '530'
- '570'
degree_awarded: PhD
department:
- _id: GradSch
- _id: MiSi
doi: 10.15479/14530
file:
- access_level: open_access
  checksum: 52e1d0ab6c1abe59c82dfe8c9ff5f83a
  content_type: application/pdf
  creator: mriedl
  date_created: 2023-11-15T09:52:54Z
  date_updated: 2023-11-15T09:52:54Z
  file_id: '14536'
  file_name: Thesis_Riedl_2023_corr.pdf
  file_size: 36743942
  relation: main_file
  success: 1
file_date_updated: 2023-11-15T09:52:54Z
has_accepted_license: '1'
keyword:
- Synchronization
- Collective Movement
- Active Matter
- Cell Migration
- Active Colloids
language:
- iso: eng
month: '11'
oa: 1
oa_version: Updated Version
page: '260'
publication_identifier:
  issn:
  - 2663 - 337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '10703'
    relation: part_of_dissertation
    status: public
  - id: '10791'
    relation: part_of_dissertation
    status: public
  - id: '7932'
    relation: part_of_dissertation
    status: public
  - id: '461'
    relation: part_of_dissertation
    status: public
  - id: '12726'
    relation: old_edition
    status: public
status: public
supervisor:
- first_name: Björn
  full_name: Hof, Björn
  id: 3A374330-F248-11E8-B48F-1D18A9856A87
  last_name: Hof
  orcid: 0000-0003-2057-2754
title: Synchronization in collectively moving active matter
type: dissertation
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
year: '2023'
...
---
_id: '9962'
abstract:
- lang: eng
  text: The brain is one of the largest and most complex organs and it is composed
    of billions of neurons that communicate together enabling e.g. consciousness.
    The cerebral cortex is the largest site of neural integration in the central nervous
    system. Concerted radial migration of newly born cortical projection neurons,
    from their birthplace to their final position, is a key step in the assembly of
    the cerebral cortex. The cellular and molecular mechanisms regulating radial neuronal
    migration in vivo are however still unclear. Recent evidence suggests that distinct
    signaling cues act cell-autonomously but differentially at certain steps during
    the overall migration process. Moreover, functional analysis of genetic mosaics
    (mutant neurons present in wild-type/heterozygote environment) using the MADM
    (Mosaic Analysis with Double Markers) analyses in comparison to global knockout
    also indicate a significant degree of non-cell-autonomous and/or community effects
    in the control of cortical neuron migration. The interactions of cell-intrinsic
    (cell-autonomous) and cell-extrinsic (non-cell-autonomous) components are largely
    unknown. In part of this thesis work we established a MADM-based experimental
    strategy for the quantitative analysis of cell-autonomous gene function versus
    non-cell-autonomous and/or community effects. The direct comparison of mutant
    neurons from the genetic mosaic (cell-autonomous) to mutant neurons in the conditional
    and/or global knockout (cell-autonomous + non-cell-autonomous) allows to quantitatively
    analyze non-cell-autonomous effects. Such analysis enable the high-resolution
    analysis of projection neuron migration dynamics in distinct environments with
    concomitant isolation of genomic and proteomic profiles. Using these experimental
    paradigms and in combination with computational modeling we show and characterize
    the nature of non-cell-autonomous effects to coordinate radial neuron migration.
    Furthermore, this thesis discusses recent developments in neurodevelopment with
    focus on neuronal polarization and non-cell-autonomous mechanisms in neuronal
    migration.
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Andi H
  full_name: Hansen, Andi H
  id: 38853E16-F248-11E8-B48F-1D18A9856A87
  last_name: Hansen
citation:
  ama: Hansen AH. Cell-autonomous gene function and non-cell-autonomous effects in
    radial projection neuron migration. 2021. doi:<a href="https://doi.org/10.15479/at:ista:9962">10.15479/at:ista:9962</a>
  apa: Hansen, A. H. (2021). <i>Cell-autonomous gene function and non-cell-autonomous
    effects in radial projection neuron migration</i>. Institute of Science and Technology
    Austria. <a href="https://doi.org/10.15479/at:ista:9962">https://doi.org/10.15479/at:ista:9962</a>
  chicago: Hansen, Andi H. “Cell-Autonomous Gene Function and Non-Cell-Autonomous
    Effects in Radial Projection Neuron Migration.” Institute of Science and Technology
    Austria, 2021. <a href="https://doi.org/10.15479/at:ista:9962">https://doi.org/10.15479/at:ista:9962</a>.
  ieee: A. H. Hansen, “Cell-autonomous gene function and non-cell-autonomous effects
    in radial projection neuron migration,” Institute of Science and Technology Austria,
    2021.
  ista: Hansen AH. 2021. Cell-autonomous gene function and non-cell-autonomous effects
    in radial projection neuron migration. Institute of Science and Technology Austria.
  mla: Hansen, Andi H. <i>Cell-Autonomous Gene Function and Non-Cell-Autonomous Effects
    in Radial Projection Neuron Migration</i>. Institute of Science and Technology
    Austria, 2021, doi:<a href="https://doi.org/10.15479/at:ista:9962">10.15479/at:ista:9962</a>.
  short: A.H. Hansen, Cell-Autonomous Gene Function and Non-Cell-Autonomous Effects
    in Radial Projection Neuron Migration, Institute of Science and Technology Austria,
    2021.
date_created: 2021-08-29T12:36:50Z
date_published: 2021-09-02T00:00:00Z
date_updated: 2023-09-22T09:58:30Z
day: '02'
ddc:
- '570'
degree_awarded: PhD
department:
- _id: GradSch
- _id: SiHi
doi: 10.15479/at:ista:9962
file:
- access_level: closed
  checksum: 66b56f5b988b233dc66a4f4b4fb2cdfe
  content_type: application/vnd.openxmlformats-officedocument.wordprocessingml.document
  creator: ahansen
  date_created: 2021-08-30T09:17:39Z
  date_updated: 2022-09-03T22:30:04Z
  embargo_to: open_access
  file_id: '9971'
  file_name: Thesis_Hansen.docx
  file_size: 10629190
  relation: source_file
- access_level: open_access
  checksum: 204fa40321a1c6289b68c473634c4bf3
  content_type: application/pdf
  creator: ahansen
  date_created: 2021-08-30T09:29:44Z
  date_updated: 2022-09-03T22:30:04Z
  embargo: 2022-09-02
  file_id: '9972'
  file_name: Thesis_Hansen_PDFA-1a.pdf
  file_size: 13457469
  relation: main_file
file_date_updated: 2022-09-03T22:30:04Z
has_accepted_license: '1'
keyword:
- Neuronal migration
- Non-cell-autonomous
- Cell-autonomous
- Neurodevelopmental disease
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
page: '182'
project:
- _id: 2625A13E-B435-11E9-9278-68D0E5697425
  grant_number: '24812'
  name: Molecular Mechanisms of Radial Neuronal Migration
publication_identifier:
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '8569'
    relation: part_of_dissertation
    status: public
  - id: '960'
    relation: part_of_dissertation
    status: public
status: public
supervisor:
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
title: Cell-autonomous gene function and non-cell-autonomous effects in radial projection
  neuron migration
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: dissertation
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
year: '2021'
...
---
_id: '6891'
abstract:
- lang: eng
  text: "While cells of mesenchymal or epithelial origin perform their effector functions
    in a purely anchorage dependent manner, cells derived from the hematopoietic lineage
    are not committed to operate only within a specific niche. Instead, these cells
    are able to function autonomously of the molecular composition in a broad range
    of tissue compartments. By this means, cells of the hematopoietic lineage retain
    the capacity to disseminate into connective tissue and recirculate between organs,
    building the foundation for essential processes such as tissue regeneration or
    immune surveillance. \r\nCells of the immune system, specifically leukocytes,
    are extraordinarily good at performing this task. These cells are able to flexibly
    shift their mode of migration between an adhesion-mediated and an adhesion-independent
    manner, instantaneously accommodating for any changes in molecular composition
    of the external scaffold. The key component driving directed leukocyte migration
    is the chemokine receptor 7, which guides the cell along gradients of chemokine
    ligand. Therefore, the physical destination of migrating leukocytes is purely
    deterministic, i.e. given by global directional cues such as chemokine gradients.
    \r\nNevertheless, these cells typically reside in three-dimensional scaffolds
    of inhomogeneous complexity, raising the question whether cells are able to locally
    discriminate between multiple optional migration routes. Current literature provides
    evidence that leukocytes, specifically dendritic cells, do indeed probe their
    surrounding by virtue of multiple explorative protrusions. However, it remains
    enigmatic how these cells decide which one is the more favorable route to follow
    and what are the key players involved in performing this task. Due to the heterogeneous
    environment of most tissues, and the vast adaptability of migrating leukocytes,
    at this time it is not clear to what extent leukocytes are able to optimize their
    migratory strategy by adapting their level of adhesiveness. And, given the fact
    that leukocyte migration is characterized by branched cell shapes in combination
    with high migration velocities, it is reasonable to assume that these cells require
    fine tuned shape maintenance mechanisms that tightly coordinate protrusion and
    adhesion dynamics in a spatiotemporal manner. \r\nTherefore, this study aimed
    to elucidate how rapidly migrating leukocytes opt for an ideal migratory path
    while maintaining a continuous cell shape and balancing adhesive forces to efficiently
    navigate through complex microenvironments. \r\nThe results of this study unraveled
    a role for the microtubule cytoskeleton in promoting the decision making process
    during path finding and for the first time point towards a microtubule-mediated
    function in cell shape maintenance of highly ramified cells such as dendritic
    cells. Furthermore, we found that migrating low-adhesive leukocytes are able to
    instantaneously adapt to increased tensile load by engaging adhesion receptors.
    This response was only occurring tangential to the substrate while adhesive properties
    in the vertical direction were not increased. As leukocytes are primed for rapid
    migration velocities, these results demonstrate that leukocyte integrins are able
    to confer a high level of traction forces parallel to the cell membrane along
    the direction of migration without wasting energy in gluing the cell to the substrate.
    \r\nThus, the data in the here presented thesis provide new insights into the
    pivotal role of cytoskeletal dynamics and the mechanisms of force transduction
    during leukocyte migration. \r\nThereby the here presented results help to further
    define fundamental principles underlying leukocyte migration and open up potential
    therapeutic avenues of clinical relevance.\r\n"
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Aglaja
  full_name: Kopf, Aglaja
  id: 31DAC7B6-F248-11E8-B48F-1D18A9856A87
  last_name: Kopf
  orcid: 0000-0002-2187-6656
citation:
  ama: Kopf A. The implication of cytoskeletal dynamics on leukocyte migration. 2019.
    doi:<a href="https://doi.org/10.15479/AT:ISTA:6891">10.15479/AT:ISTA:6891</a>
  apa: Kopf, A. (2019). <i>The implication of cytoskeletal dynamics on leukocyte migration</i>.
    Institute of Science and Technology Austria. <a href="https://doi.org/10.15479/AT:ISTA:6891">https://doi.org/10.15479/AT:ISTA:6891</a>
  chicago: Kopf, Aglaja. “The Implication of Cytoskeletal Dynamics on Leukocyte Migration.”
    Institute of Science and Technology Austria, 2019. <a href="https://doi.org/10.15479/AT:ISTA:6891">https://doi.org/10.15479/AT:ISTA:6891</a>.
  ieee: A. Kopf, “The implication of cytoskeletal dynamics on leukocyte migration,”
    Institute of Science and Technology Austria, 2019.
  ista: Kopf A. 2019. The implication of cytoskeletal dynamics on leukocyte migration.
    Institute of Science and Technology Austria.
  mla: Kopf, Aglaja. <i>The Implication of Cytoskeletal Dynamics on Leukocyte Migration</i>.
    Institute of Science and Technology Austria, 2019, doi:<a href="https://doi.org/10.15479/AT:ISTA:6891">10.15479/AT:ISTA:6891</a>.
  short: A. Kopf, The Implication of Cytoskeletal Dynamics on Leukocyte Migration,
    Institute of Science and Technology Austria, 2019.
date_created: 2019-09-19T08:19:44Z
date_published: 2019-07-24T00:00:00Z
date_updated: 2023-10-18T08:49:17Z
day: '24'
ddc:
- '570'
degree_awarded: PhD
department:
- _id: MiSi
doi: 10.15479/AT:ISTA:6891
file:
- access_level: closed
  checksum: 00d100d6468e31e583051e0a006b640c
  content_type: application/vnd.openxmlformats-officedocument.wordprocessingml.document
  creator: akopf
  date_created: 2019-10-15T05:28:42Z
  date_updated: 2020-10-17T22:30:03Z
  embargo_to: open_access
  file_id: '6950'
  file_name: Kopf_PhD_Thesis.docx
  file_size: 74735267
  relation: source_file
- access_level: open_access
  checksum: 5d1baa899993ae6ca81aebebe1797000
  content_type: application/pdf
  creator: akopf
  date_created: 2019-10-15T05:28:47Z
  date_updated: 2020-10-17T22:30:03Z
  embargo: 2020-10-16
  file_id: '6951'
  file_name: Kopf_PhD_Thesis1.pdf
  file_size: 52787224
  relation: main_file
file_date_updated: 2020-10-17T22:30:03Z
has_accepted_license: '1'
keyword:
- cell biology
- immunology
- leukocyte
- migration
- microfluidics
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
page: '171'
project:
- _id: 265E2996-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: W01250-B20
  name: Nano-Analytics of Cellular Systems
publication_identifier:
  eissn:
  - 2663-337X
  isbn:
  - 978-3-99078-002-2
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
  link:
  - relation: press_release
    url: https://ist.ac.at/en/news/feeling-like-a-cell/
  record:
  - id: '6328'
    relation: part_of_dissertation
    status: public
  - id: '15'
    relation: part_of_dissertation
    status: public
  - id: '6877'
    relation: part_of_dissertation
    status: public
status: public
supervisor:
- first_name: Michael K
  full_name: Sixt, Michael K
  id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87
  last_name: Sixt
  orcid: 0000-0002-6620-9179
title: The implication of cytoskeletal dynamics on leukocyte migration
type: dissertation
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
year: '2019'
...
---
_id: '6354'
abstract:
- lang: eng
  text: Blood platelets are critical for hemostasis and thrombosis, but also play
    diverse roles during immune responses. We have recently reported that platelets
    migrate at sites of infection in vitro and in vivo. Importantly, platelets use
    their ability to migrate to collect and bundle fibrin (ogen)-bound bacteria accomplishing
    efficient intravascular bacterial trapping. Here, we describe a method that allows
    analyzing platelet migration in vitro, focusing on their ability to collect bacteria
    and trap bacteria under flow.
acknowledgement: ' FöFoLe project 947 (F.G.), the Friedrich-Baur-Stiftung project
  41/16 (F.G.)'
article_number: e3018
author:
- first_name: Shuxia
  full_name: Fan, Shuxia
  last_name: Fan
- first_name: Michael
  full_name: Lorenz, Michael
  last_name: Lorenz
- first_name: Steffen
  full_name: Massberg, Steffen
  last_name: Massberg
- first_name: Florian R
  full_name: Gärtner, Florian R
  id: 397A88EE-F248-11E8-B48F-1D18A9856A87
  last_name: Gärtner
  orcid: 0000-0001-6120-3723
citation:
  ama: Fan S, Lorenz M, Massberg S, Gärtner FR. Platelet migration and bacterial trapping
    assay under flow. <i>Bio-Protocol</i>. 2018;8(18). doi:<a href="https://doi.org/10.21769/bioprotoc.3018">10.21769/bioprotoc.3018</a>
  apa: Fan, S., Lorenz, M., Massberg, S., &#38; Gärtner, F. R. (2018). Platelet migration
    and bacterial trapping assay under flow. <i>Bio-Protocol</i>. Bio-Protocol. <a
    href="https://doi.org/10.21769/bioprotoc.3018">https://doi.org/10.21769/bioprotoc.3018</a>
  chicago: Fan, Shuxia, Michael Lorenz, Steffen Massberg, and Florian R Gärtner. “Platelet
    Migration and Bacterial Trapping Assay under Flow.” <i>Bio-Protocol</i>. Bio-Protocol,
    2018. <a href="https://doi.org/10.21769/bioprotoc.3018">https://doi.org/10.21769/bioprotoc.3018</a>.
  ieee: S. Fan, M. Lorenz, S. Massberg, and F. R. Gärtner, “Platelet migration and
    bacterial trapping assay under flow,” <i>Bio-Protocol</i>, vol. 8, no. 18. Bio-Protocol,
    2018.
  ista: Fan S, Lorenz M, Massberg S, Gärtner FR. 2018. Platelet migration and bacterial
    trapping assay under flow. Bio-Protocol. 8(18), e3018.
  mla: Fan, Shuxia, et al. “Platelet Migration and Bacterial Trapping Assay under
    Flow.” <i>Bio-Protocol</i>, vol. 8, no. 18, e3018, Bio-Protocol, 2018, doi:<a
    href="https://doi.org/10.21769/bioprotoc.3018">10.21769/bioprotoc.3018</a>.
  short: S. Fan, M. Lorenz, S. Massberg, F.R. Gärtner, Bio-Protocol 8 (2018).
date_created: 2019-04-29T09:40:33Z
date_published: 2018-09-20T00:00:00Z
date_updated: 2021-01-12T08:07:12Z
day: '20'
ddc:
- '570'
department:
- _id: MiSi
doi: 10.21769/bioprotoc.3018
ec_funded: 1
file:
- access_level: open_access
  checksum: d4588377e789da7f360b553ae02c5119
  content_type: application/pdf
  creator: dernst
  date_created: 2019-04-30T08:04:33Z
  date_updated: 2020-07-14T12:47:28Z
  file_id: '6360'
  file_name: 2018_BioProtocol_Fan.pdf
  file_size: 2928337
  relation: main_file
file_date_updated: 2020-07-14T12:47:28Z
has_accepted_license: '1'
intvolume: '         8'
issue: '18'
keyword:
- Platelets
- Cell migration
- Bacteria
- Shear flow
- Fibrinogen
- E. coli
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
project:
- _id: 260AA4E2-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '747687'
  name: Mechanical Adaptation of Lamellipodial Actin Networks in Migrating Cells
publication: Bio-Protocol
publication_identifier:
  issn:
  - 2331-8325
publication_status: published
publisher: Bio-Protocol
quality_controlled: '1'
status: public
title: Platelet migration and bacterial trapping assay under flow
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 8
year: '2018'
...
---
_id: '5570'
abstract:
- lang: eng
  text: Matlab script to calculate the forward migration indexes (<d_y>/<L>) from
    TrackMate spot-statistics files.
article_processing_charge: No
author:
- first_name: Robert
  full_name: Hauschild, Robert
  id: 4E01D6B4-F248-11E8-B48F-1D18A9856A87
  last_name: Hauschild
  orcid: 0000-0001-9843-3522
citation:
  ama: Hauschild R. Forward migration indexes. 2017. doi:<a href="https://doi.org/10.15479/AT:ISTA:75">10.15479/AT:ISTA:75</a>
  apa: Hauschild, R. (2017). Forward migration indexes. Institute of Science and Technology
    Austria. <a href="https://doi.org/10.15479/AT:ISTA:75">https://doi.org/10.15479/AT:ISTA:75</a>
  chicago: Hauschild, Robert. “Forward Migration Indexes.” Institute of Science and
    Technology Austria, 2017. <a href="https://doi.org/10.15479/AT:ISTA:75">https://doi.org/10.15479/AT:ISTA:75</a>.
  ieee: R. Hauschild, “Forward migration indexes.” Institute of Science and Technology
    Austria, 2017.
  ista: Hauschild R. 2017. Forward migration indexes, Institute of Science and Technology
    Austria, <a href="https://doi.org/10.15479/AT:ISTA:75">10.15479/AT:ISTA:75</a>.
  mla: Hauschild, Robert. <i>Forward Migration Indexes</i>. Institute of Science and
    Technology Austria, 2017, doi:<a href="https://doi.org/10.15479/AT:ISTA:75">10.15479/AT:ISTA:75</a>.
  short: R. Hauschild, (2017).
datarep_id: '75'
date_created: 2018-12-12T12:31:35Z
date_published: 2017-10-04T00:00:00Z
date_updated: 2024-02-21T13:47:14Z
day: '04'
ddc:
- '570'
department:
- _id: Bio
doi: 10.15479/AT:ISTA:75
file:
- access_level: open_access
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  creator: system
  date_created: 2018-12-12T13:02:29Z
  date_updated: 2020-07-14T12:47:04Z
  file_id: '5596'
  file_name: IST-2017-75-v1+1_FMI.m
  file_size: 799
  relation: main_file
file_date_updated: 2020-07-14T12:47:04Z
has_accepted_license: '1'
keyword:
- Cell migration
- tracking
- forward migration index
- FMI
license: https://creativecommons.org/publicdomain/zero/1.0/
month: '10'
oa: 1
oa_version: Published Version
publisher: Institute of Science and Technology Austria
status: public
title: Forward migration indexes
tmp:
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type: research_data
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2017'
...
---
_id: '5555'
abstract:
- lang: eng
  text: This FIJI script calculates the population average of the migration speed
    as a function of time of all cells from wide field microscopy movies.
article_processing_charge: No
author:
- first_name: Robert
  full_name: Hauschild, Robert
  id: 4E01D6B4-F248-11E8-B48F-1D18A9856A87
  last_name: Hauschild
  orcid: 0000-0001-9843-3522
citation:
  ama: Hauschild R. Fiji script to determine average speed and direction of migration
    of cells. 2016. doi:<a href="https://doi.org/10.15479/AT:ISTA:44">10.15479/AT:ISTA:44</a>
  apa: Hauschild, R. (2016). Fiji script to determine average speed and direction
    of migration of cells. Institute of Science and Technology Austria. <a href="https://doi.org/10.15479/AT:ISTA:44">https://doi.org/10.15479/AT:ISTA:44</a>
  chicago: Hauschild, Robert. “Fiji Script to Determine Average Speed and Direction
    of Migration of Cells.” Institute of Science and Technology Austria, 2016. <a
    href="https://doi.org/10.15479/AT:ISTA:44">https://doi.org/10.15479/AT:ISTA:44</a>.
  ieee: R. Hauschild, “Fiji script to determine average speed and direction of migration
    of cells.” Institute of Science and Technology Austria, 2016.
  ista: Hauschild R. 2016. Fiji script to determine average speed and direction of
    migration of cells, Institute of Science and Technology Austria, <a href="https://doi.org/10.15479/AT:ISTA:44">10.15479/AT:ISTA:44</a>.
  mla: Hauschild, Robert. <i>Fiji Script to Determine Average Speed and Direction
    of Migration of Cells</i>. Institute of Science and Technology Austria, 2016,
    doi:<a href="https://doi.org/10.15479/AT:ISTA:44">10.15479/AT:ISTA:44</a>.
  short: R. Hauschild, (2016).
datarep_id: '44'
date_created: 2018-12-12T12:31:31Z
date_published: 2016-07-08T00:00:00Z
date_updated: 2024-02-21T13:50:06Z
day: '08'
ddc:
- '570'
department:
- _id: Bio
doi: 10.15479/AT:ISTA:44
file:
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  checksum: 9f96cddbcd4ed689f48712ffe234d5e5
  content_type: application/zip
  creator: system
  date_created: 2018-12-12T13:03:03Z
  date_updated: 2020-07-14T12:47:02Z
  file_id: '5621'
  file_name: IST-2016-44-v1+1_migrationAnalyzer.zip
  file_size: 20692
  relation: main_file
file_date_updated: 2020-07-14T12:47:02Z
has_accepted_license: '1'
keyword:
- cell migration
- wide field microscopy
- FIJI
month: '07'
oa: 1
oa_version: Published Version
publisher: Institute of Science and Technology Austria
status: public
title: Fiji script to determine average speed and direction of migration of cells
tmp:
  image: /images/cc_0.png
  legal_code_url: https://creativecommons.org/publicdomain/zero/1.0/legalcode
  name: Creative Commons Public Domain Dedication (CC0 1.0)
  short: CC0 (1.0)
type: research_data
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2016'
...
