---
_id: '10359'
abstract:
- lang: eng
  text: Biological membranes typically contain a large number of different components
    dispersed in small concentrations in the main membrane phase, including proteins,
    sugars, and lipids of varying geometrical properties. Most of these components
    do not bind the cargo. Here, we show that such “inert” components can be crucial
    for the precise control of cross-membrane trafficking. Using a statistical mechanics
    model and molecular dynamics simulations, we demonstrate that the presence of
    inert membrane components of small isotropic curvatures dramatically influences
    cargo endocytosis, even if the total spontaneous curvature of such a membrane
    remains unchanged. Curved lipids, such as cholesterol, as well as asymmetrically
    included proteins and tethered sugars can, therefore, actively participate in
    the control of the membrane trafficking of nanoscopic cargo. We find that even
    a low-level expression of curved inert membrane components can determine the membrane
    selectivity toward the cargo size and can be used to selectively target membranes
    of certain compositions. Our results suggest a robust and general method of controlling
    cargo trafficking by adjusting the membrane composition without needing to alter
    the concentration of receptors or the average membrane curvature. This study indicates
    that cells can prepare for any trafficking event by incorporating curved inert
    components in either of the membrane leaflets.
acknowledgement: We acknowledge discussions with Giuseppe Battaglia as well as support
  from the Herchel Smith scholarship (T.C.), the CAS PIFI fellowship (T.C.), the UCL
  Institute for the Physics of Living Systems (T.C. and A.Š.), the Austrian Academy
  of Sciences through a DOC fellowship (P.W.), the European Union Horizon 2020 programme
  under ETN grant no. 674979-NANOTRANS and FET grant no. 766972-NANOPHLOW (J.D. and
  D.F.), the Engineering and Physical Sciences Research Council (D.F. and A.Š.), the
  Academy of Medical Sciences and Wellcome Trust (A.Š.), and the Royal Society (A.Š.).
  We thank Claudia Flandoli for help with Figure 1.
article_processing_charge: No
article_type: original
author:
- first_name: Tine
  full_name: Curk, Tine
  last_name: Curk
- first_name: Peter
  full_name: Wirnsberger, Peter
  last_name: Wirnsberger
- first_name: Jure
  full_name: Dobnikar, Jure
  last_name: Dobnikar
- first_name: Daan
  full_name: Frenkel, Daan
  last_name: Frenkel
- first_name: Anđela
  full_name: Šarić, Anđela
  id: bf63d406-f056-11eb-b41d-f263a6566d8b
  last_name: Šarić
  orcid: 0000-0002-7854-2139
citation:
  ama: Curk T, Wirnsberger P, Dobnikar J, Frenkel D, Šarić A. Controlling cargo trafficking
    in multicomponent membranes. <i>Nano Letters</i>. 2018;18(9):5350-5356. doi:<a
    href="https://doi.org/10.1021/acs.nanolett.8b00786">10.1021/acs.nanolett.8b00786</a>
  apa: Curk, T., Wirnsberger, P., Dobnikar, J., Frenkel, D., &#38; Šarić, A. (2018).
    Controlling cargo trafficking in multicomponent membranes. <i>Nano Letters</i>.
    American Chemical Society. <a href="https://doi.org/10.1021/acs.nanolett.8b00786">https://doi.org/10.1021/acs.nanolett.8b00786</a>
  chicago: Curk, Tine, Peter Wirnsberger, Jure Dobnikar, Daan Frenkel, and Anđela
    Šarić. “Controlling Cargo Trafficking in Multicomponent Membranes.” <i>Nano Letters</i>.
    American Chemical Society, 2018. <a href="https://doi.org/10.1021/acs.nanolett.8b00786">https://doi.org/10.1021/acs.nanolett.8b00786</a>.
  ieee: T. Curk, P. Wirnsberger, J. Dobnikar, D. Frenkel, and A. Šarić, “Controlling
    cargo trafficking in multicomponent membranes,” <i>Nano Letters</i>, vol. 18,
    no. 9. American Chemical Society, pp. 5350–5356, 2018.
  ista: Curk T, Wirnsberger P, Dobnikar J, Frenkel D, Šarić A. 2018. Controlling cargo
    trafficking in multicomponent membranes. Nano Letters. 18(9), 5350–5356.
  mla: Curk, Tine, et al. “Controlling Cargo Trafficking in Multicomponent Membranes.”
    <i>Nano Letters</i>, vol. 18, no. 9, American Chemical Society, 2018, pp. 5350–56,
    doi:<a href="https://doi.org/10.1021/acs.nanolett.8b00786">10.1021/acs.nanolett.8b00786</a>.
  short: T. Curk, P. Wirnsberger, J. Dobnikar, D. Frenkel, A. Šarić, Nano Letters
    18 (2018) 5350–5356.
date_created: 2021-11-26T12:15:47Z
date_published: 2018-04-18T00:00:00Z
date_updated: 2021-11-26T15:14:08Z
day: '18'
doi: 10.1021/acs.nanolett.8b00786
extern: '1'
external_id:
  pmid:
  - '29667410'
intvolume: '        18'
issue: '9'
keyword:
- mechanical engineering
- condensed matter physics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1712.10147
month: '04'
oa: 1
oa_version: Preprint
page: 5350-5356
pmid: 1
publication: Nano Letters
publication_identifier:
  eissn:
  - 1530-6992
  issn:
  - 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Controlling cargo trafficking in multicomponent membranes
type: journal_article
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 18
year: '2018'
...
---
_id: '8448'
abstract:
- lang: eng
  text: We present an improved fast mixing device based on the rapid mixing of two
    solutions inside the NMR probe, as originally proposed by Hore and coworkers (J.
    Am. Chem. Soc. 125 (2003) 12484–12492). Such a device is important for off-equilibrium
    studies of molecular kinetics by multidimensional real-time NMR spectrsocopy.
    The novelty of this device is that it allows removing the injector from the NMR
    detection volume after mixing, and thus provides good magnetic field homogeneity
    independently of the initial sample volume placed in the NMR probe. The apparatus
    is simple to build, inexpensive, and can be used without any hardware modification
    on any type of liquid-state NMR spectrometer. We demonstrate the performance of
    our fast mixing device in terms of improved magnetic field homogeneity, and show
    an application to the study of protein folding and the structural characterization
    of transiently populated folding intermediates.
article_processing_charge: No
article_type: original
author:
- first_name: Rémi
  full_name: Franco, Rémi
  last_name: Franco
- first_name: Adrien
  full_name: Favier, Adrien
  last_name: Favier
- first_name: Paul
  full_name: Schanda, Paul
  id: 7B541462-FAF6-11E9-A490-E8DFE5697425
  last_name: Schanda
  orcid: 0000-0002-9350-7606
- first_name: Bernhard
  full_name: Brutscher, Bernhard
  last_name: Brutscher
citation:
  ama: Franco R, Favier A, Schanda P, Brutscher B. Optimized fast mixing device for
    real-time NMR applications. <i>Journal of Magnetic Resonance</i>. 2017;281(8):125-129.
    doi:<a href="https://doi.org/10.1016/j.jmr.2017.05.016">10.1016/j.jmr.2017.05.016</a>
  apa: Franco, R., Favier, A., Schanda, P., &#38; Brutscher, B. (2017). Optimized
    fast mixing device for real-time NMR applications. <i>Journal of Magnetic Resonance</i>.
    Elsevier. <a href="https://doi.org/10.1016/j.jmr.2017.05.016">https://doi.org/10.1016/j.jmr.2017.05.016</a>
  chicago: Franco, Rémi, Adrien Favier, Paul Schanda, and Bernhard Brutscher. “Optimized
    Fast Mixing Device for Real-Time NMR Applications.” <i>Journal of Magnetic Resonance</i>.
    Elsevier, 2017. <a href="https://doi.org/10.1016/j.jmr.2017.05.016">https://doi.org/10.1016/j.jmr.2017.05.016</a>.
  ieee: R. Franco, A. Favier, P. Schanda, and B. Brutscher, “Optimized fast mixing
    device for real-time NMR applications,” <i>Journal of Magnetic Resonance</i>,
    vol. 281, no. 8. Elsevier, pp. 125–129, 2017.
  ista: Franco R, Favier A, Schanda P, Brutscher B. 2017. Optimized fast mixing device
    for real-time NMR applications. Journal of Magnetic Resonance. 281(8), 125–129.
  mla: Franco, Rémi, et al. “Optimized Fast Mixing Device for Real-Time NMR Applications.”
    <i>Journal of Magnetic Resonance</i>, vol. 281, no. 8, Elsevier, 2017, pp. 125–29,
    doi:<a href="https://doi.org/10.1016/j.jmr.2017.05.016">10.1016/j.jmr.2017.05.016</a>.
  short: R. Franco, A. Favier, P. Schanda, B. Brutscher, Journal of Magnetic Resonance
    281 (2017) 125–129.
date_created: 2020-09-18T10:06:27Z
date_published: 2017-08-01T00:00:00Z
date_updated: 2021-01-12T08:19:20Z
day: '01'
doi: 10.1016/j.jmr.2017.05.016
extern: '1'
intvolume: '       281'
issue: '8'
keyword:
- Nuclear and High Energy Physics
- Biophysics
- Biochemistry
- Condensed Matter Physics
language:
- iso: eng
month: '08'
oa_version: None
page: 125-129
publication: Journal of Magnetic Resonance
publication_identifier:
  issn:
  - 1090-7807
publication_status: published
publisher: Elsevier
quality_controlled: '1'
status: public
title: Optimized fast mixing device for real-time NMR applications
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 281
year: '2017'
...
---
_id: '14007'
abstract:
- lang: eng
  text: 'In a recent article by Hockett et al (2016 J. Phys. B: At. Mol. Opt. Phys.
    49 095602), time delays arising in the context of molecular single-photon ionization
    are investigated from a theoretical point of view. We argue that one of the central
    equations given in this article is incorrect and present a reformulation that
    is consistent with the established treatment of angle-dependent scattering delays
    (Eisenbud 1948 PhD Thesis Princeton University; Wigner 1955 Phys. Rev. 98 145–7;
    Smith 1960 Phys. Rev. 118 349–6; Nussenzveig 1972 Phys. Rev. D 6 1534–42).'
article_number: '078002'
article_processing_charge: No
article_type: letter_note
arxiv: 1
author:
- first_name: Denitsa Rangelova
  full_name: Baykusheva, Denitsa Rangelova
  id: 71b4d059-2a03-11ee-914d-dfa3beed6530
  last_name: Baykusheva
- first_name: Hans Jakob
  full_name: Wörner, Hans Jakob
  last_name: Wörner
citation:
  ama: 'Baykusheva DR, Wörner HJ. Comment on ‘Time delays in molecular photoionization.’
    <i>Journal of Physics B: Atomic, Molecular and Optical Physics</i>. 2017;50(7).
    doi:<a href="https://doi.org/10.1088/1361-6455/aa62b5">10.1088/1361-6455/aa62b5</a>'
  apa: 'Baykusheva, D. R., &#38; Wörner, H. J. (2017). Comment on ‘Time delays in
    molecular photoionization.’ <i>Journal of Physics B: Atomic, Molecular and Optical
    Physics</i>. IOP Publishing. <a href="https://doi.org/10.1088/1361-6455/aa62b5">https://doi.org/10.1088/1361-6455/aa62b5</a>'
  chicago: 'Baykusheva, Denitsa Rangelova, and Hans Jakob Wörner. “Comment on ‘Time
    Delays in Molecular Photoionization.’” <i>Journal of Physics B: Atomic, Molecular
    and Optical Physics</i>. IOP Publishing, 2017. <a href="https://doi.org/10.1088/1361-6455/aa62b5">https://doi.org/10.1088/1361-6455/aa62b5</a>.'
  ieee: 'D. R. Baykusheva and H. J. Wörner, “Comment on ‘Time delays in molecular
    photoionization,’” <i>Journal of Physics B: Atomic, Molecular and Optical Physics</i>,
    vol. 50, no. 7. IOP Publishing, 2017.'
  ista: 'Baykusheva DR, Wörner HJ. 2017. Comment on ‘Time delays in molecular photoionization’.
    Journal of Physics B: Atomic, Molecular and Optical Physics. 50(7), 078002.'
  mla: 'Baykusheva, Denitsa Rangelova, and Hans Jakob Wörner. “Comment on ‘Time Delays
    in Molecular Photoionization.’” <i>Journal of Physics B: Atomic, Molecular and
    Optical Physics</i>, vol. 50, no. 7, 078002, IOP Publishing, 2017, doi:<a href="https://doi.org/10.1088/1361-6455/aa62b5">10.1088/1361-6455/aa62b5</a>.'
  short: 'D.R. Baykusheva, H.J. Wörner, Journal of Physics B: Atomic, Molecular and
    Optical Physics 50 (2017).'
date_created: 2023-08-10T06:36:29Z
date_published: 2017-03-15T00:00:00Z
date_updated: 2023-08-22T08:32:43Z
day: '15'
doi: 10.1088/1361-6455/aa62b5
extern: '1'
external_id:
  arxiv:
  - '1611.09352'
intvolume: '        50'
issue: '7'
keyword:
- Condensed Matter Physics
- Atomic and Molecular Physics
- and Optics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1611.09352
month: '03'
oa: 1
oa_version: Preprint
publication: 'Journal of Physics B: Atomic, Molecular and Optical Physics'
publication_identifier:
  eissn:
  - 1361-6455
  issn:
  - 0953-4075
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Comment on ‘Time delays in molecular photoionization’
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 50
year: '2017'
...
---
_id: '10375'
abstract:
- lang: eng
  text: 'Cellular membranes exhibit a large variety of shapes, strongly coupled to
    their function. Many biological processes involve dynamic reshaping of membranes,
    usually mediated by proteins. This interaction works both ways: while proteins
    influence the membrane shape, the membrane shape affects the interactions between
    the proteins. To study these membrane-mediated interactions on closed and anisotropically
    curved membranes, we use colloids adhered to ellipsoidal membrane vesicles as
    a model system. We find that two particles on a closed system always attract each
    other, and tend to align with the direction of largest curvature. Multiple particles
    form arcs, or, at large enough numbers, a complete ring surrounding the vesicle
    in its equatorial plane. The resulting vesicle shape resembles a snowman. Our
    results indicate that these physical interactions on membranes with anisotropic
    shapes can be exploited by cells to drive macromolecules to preferred regions
    of cellular or intracellular membranes, and utilized to initiate dynamic processes
    such as cell division. The same principle could be used to find the midplane of
    an artificial vesicle, as a first step towards dividing it into two equal parts.'
acknowledgement: This work was supported by the Netherlands Organisation for Scientific
  Research (NWO/OCW), as part of the Frontiers of Nanoscience program.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Afshin
  full_name: Vahid, Afshin
  last_name: Vahid
- first_name: Anđela
  full_name: Šarić, Anđela
  id: bf63d406-f056-11eb-b41d-f263a6566d8b
  last_name: Šarić
  orcid: 0000-0002-7854-2139
- first_name: Timon
  full_name: Idema, Timon
  last_name: Idema
citation:
  ama: Vahid A, Šarić A, Idema T. Curvature variation controls particle aggregation
    on fluid vesicles. <i>Soft Matter</i>. 2017;13(28):4924-4930. doi:<a href="https://doi.org/10.1039/c7sm00433h">10.1039/c7sm00433h</a>
  apa: Vahid, A., Šarić, A., &#38; Idema, T. (2017). Curvature variation controls
    particle aggregation on fluid vesicles. <i>Soft Matter</i>. Royal Society of Chemistry.
    <a href="https://doi.org/10.1039/c7sm00433h">https://doi.org/10.1039/c7sm00433h</a>
  chicago: Vahid, Afshin, Anđela Šarić, and Timon Idema. “Curvature Variation Controls
    Particle Aggregation on Fluid Vesicles.” <i>Soft Matter</i>. Royal Society of
    Chemistry, 2017. <a href="https://doi.org/10.1039/c7sm00433h">https://doi.org/10.1039/c7sm00433h</a>.
  ieee: A. Vahid, A. Šarić, and T. Idema, “Curvature variation controls particle aggregation
    on fluid vesicles,” <i>Soft Matter</i>, vol. 13, no. 28. Royal Society of Chemistry,
    pp. 4924–4930, 2017.
  ista: Vahid A, Šarić A, Idema T. 2017. Curvature variation controls particle aggregation
    on fluid vesicles. Soft Matter. 13(28), 4924–4930.
  mla: Vahid, Afshin, et al. “Curvature Variation Controls Particle Aggregation on
    Fluid Vesicles.” <i>Soft Matter</i>, vol. 13, no. 28, Royal Society of Chemistry,
    2017, pp. 4924–30, doi:<a href="https://doi.org/10.1039/c7sm00433h">10.1039/c7sm00433h</a>.
  short: A. Vahid, A. Šarić, T. Idema, Soft Matter 13 (2017) 4924–4930.
date_created: 2021-11-29T10:00:39Z
date_published: 2017-06-15T00:00:00Z
date_updated: 2021-11-29T10:33:36Z
day: '15'
doi: 10.1039/c7sm00433h
extern: '1'
external_id:
  arxiv:
  - '1703.00776'
  pmid:
  - '28677712'
intvolume: '        13'
issue: '28'
keyword:
- condensed matter physics
- general chemistry
language:
- iso: eng
license: https://creativecommons.org/licenses/by/3.0/
main_file_link:
- open_access: '1'
  url: https://pubs.rsc.org/en/content/articlelanding/2017/SM/C7SM00433H
month: '06'
oa: 1
oa_version: Published Version
page: 4924-4930
pmid: 1
publication: Soft Matter
publication_identifier:
  eissn:
  - 1744-6848
  issn:
  - 1744-683X
publication_status: published
publisher: Royal Society of Chemistry
quality_controlled: '1'
scopus_import: '1'
status: public
title: Curvature variation controls particle aggregation on fluid vesicles
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/3.0/legalcode
  name: Creative Commons Attribution 3.0 Unported (CC BY 3.0)
  short: CC BY (3.0)
type: journal_article
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 13
year: '2017'
...
---
_id: '13386'
abstract:
- lang: eng
  text: Azobenzenealkanethiols in self-assembled monolayers (SAMs) on Au(111) exhibit
    reversible trans–cis photoisomerization when diluted with alkanethiol spacers.
    Using these mixed SAMs, we show switching of the linear optical and second-harmonic
    response. The effective switching of these surface optical properties relies on
    a reasonably large cross section and a high photoisomerization yield as well as
    a long lifetime of the metastable cis isomer. We quantified the switching process
    by X-ray absorption spectroscopy. The cross sections for the trans–cis and cis–trans
    photoisomerization with 365 and 455 nm light, respectively, are 1 order of magnitude
    smaller than in solution. In vacuum, the 365 nm photostationary state comprises
    50–74% of the molecules in the cis form, limited by their rapid thermal isomerization
    back to the trans state. In contrast, the 455 nm photostationary state contains
    nearly 100% trans-azobenzene. We determined time constants for the thermal cis–trans
    isomerization of only a few minutes in vacuum and in a dry nitrogen atmosphere
    but of more than 1 day in ambient air. Our results suggest that adventitious water
    adsorbed on the surface of the SAM stabilizes the polar cis configuration of azobenzene
    under ambient conditions. The back reaction rate constants differing by 2 orders
    of magnitude underline the huge influence of the environment and, accordingly,
    its importance when comparing various experiments.
article_processing_charge: No
article_type: original
author:
- first_name: Thomas
  full_name: Moldt, Thomas
  last_name: Moldt
- first_name: Daniel
  full_name: Przyrembel, Daniel
  last_name: Przyrembel
- first_name: Michael
  full_name: Schulze, Michael
  last_name: Schulze
- first_name: Wibke
  full_name: Bronsch, Wibke
  last_name: Bronsch
- first_name: Larissa
  full_name: Boie, Larissa
  last_name: Boie
- first_name: Daniel
  full_name: Brete, Daniel
  last_name: Brete
- first_name: Cornelius
  full_name: Gahl, Cornelius
  last_name: Gahl
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
- first_name: Petra
  full_name: Tegeder, Petra
  last_name: Tegeder
- first_name: Martin
  full_name: Weinelt, Martin
  last_name: Weinelt
citation:
  ama: Moldt T, Przyrembel D, Schulze M, et al. Differing isomerization kinetics of
    azobenzene-functionalized self-assembled monolayers in ambient air and in vacuum.
    <i>Langmuir</i>. 2016;32(42):10795-10801. doi:<a href="https://doi.org/10.1021/acs.langmuir.6b01690">10.1021/acs.langmuir.6b01690</a>
  apa: Moldt, T., Przyrembel, D., Schulze, M., Bronsch, W., Boie, L., Brete, D., …
    Weinelt, M. (2016). Differing isomerization kinetics of azobenzene-functionalized
    self-assembled monolayers in ambient air and in vacuum. <i>Langmuir</i>. American
    Chemical Society. <a href="https://doi.org/10.1021/acs.langmuir.6b01690">https://doi.org/10.1021/acs.langmuir.6b01690</a>
  chicago: Moldt, Thomas, Daniel Przyrembel, Michael Schulze, Wibke Bronsch, Larissa
    Boie, Daniel Brete, Cornelius Gahl, Rafal Klajn, Petra Tegeder, and Martin Weinelt.
    “Differing Isomerization Kinetics of Azobenzene-Functionalized Self-Assembled
    Monolayers in Ambient Air and in Vacuum.” <i>Langmuir</i>. American Chemical Society,
    2016. <a href="https://doi.org/10.1021/acs.langmuir.6b01690">https://doi.org/10.1021/acs.langmuir.6b01690</a>.
  ieee: T. Moldt <i>et al.</i>, “Differing isomerization kinetics of azobenzene-functionalized
    self-assembled monolayers in ambient air and in vacuum,” <i>Langmuir</i>, vol.
    32, no. 42. American Chemical Society, pp. 10795–10801, 2016.
  ista: Moldt T, Przyrembel D, Schulze M, Bronsch W, Boie L, Brete D, Gahl C, Klajn
    R, Tegeder P, Weinelt M. 2016. Differing isomerization kinetics of azobenzene-functionalized
    self-assembled monolayers in ambient air and in vacuum. Langmuir. 32(42), 10795–10801.
  mla: Moldt, Thomas, et al. “Differing Isomerization Kinetics of Azobenzene-Functionalized
    Self-Assembled Monolayers in Ambient Air and in Vacuum.” <i>Langmuir</i>, vol.
    32, no. 42, American Chemical Society, 2016, pp. 10795–801, doi:<a href="https://doi.org/10.1021/acs.langmuir.6b01690">10.1021/acs.langmuir.6b01690</a>.
  short: T. Moldt, D. Przyrembel, M. Schulze, W. Bronsch, L. Boie, D. Brete, C. Gahl,
    R. Klajn, P. Tegeder, M. Weinelt, Langmuir 32 (2016) 10795–10801.
date_created: 2023-08-01T09:42:37Z
date_published: 2016-10-25T00:00:00Z
date_updated: 2023-08-07T12:27:06Z
day: '25'
doi: 10.1021/acs.langmuir.6b01690
extern: '1'
external_id:
  pmid:
  - '27681851'
intvolume: '        32'
issue: '42'
keyword:
- Electrochemistry
- Spectroscopy
- Surfaces and Interfaces
- Condensed Matter Physics
- General Materials Science
language:
- iso: eng
month: '10'
oa_version: None
page: 10795-10801
pmid: 1
publication: Langmuir
publication_identifier:
  eissn:
  - 1520-5827
  issn:
  - 0743-7463
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Differing isomerization kinetics of azobenzene-functionalized self-assembled
  monolayers in ambient air and in vacuum
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 32
year: '2016'
...
---
_id: '9052'
abstract:
- lang: eng
  text: We describe colloidal Janus particles with metallic and dielectric faces that
    swim vigorously when illuminated by defocused optical tweezers without consuming
    any chemical fuel. Rather than wandering randomly, these optically-activated colloidal
    swimmers circulate back and forth through the beam of light, tracing out sinuous
    rosette patterns. We propose a model for this mode of light-activated transport
    that accounts for the observed behavior through a combination of self-thermophoresis
    and optically-induced torque. In the deterministic limit, this model yields trajectories
    that resemble rosette curves known as hypotrochoids.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Henrique
  full_name: Moyses, Henrique
  last_name: Moyses
- first_name: Jérémie A
  full_name: Palacci, Jérémie A
  id: 8fb92548-2b22-11eb-b7c1-a3f0d08d7c7d
  last_name: Palacci
  orcid: 0000-0002-7253-9465
- first_name: Stefano
  full_name: Sacanna, Stefano
  last_name: Sacanna
- first_name: David G.
  full_name: Grier, David G.
  last_name: Grier
citation:
  ama: Moyses H, Palacci JA, Sacanna S, Grier DG. Trochoidal trajectories of self-propelled
    Janus particles in a diverging laser beam. <i>Soft Matter</i>. 2016;12(30):6357-6364.
    doi:<a href="https://doi.org/10.1039/c6sm01163b">10.1039/c6sm01163b</a>
  apa: Moyses, H., Palacci, J. A., Sacanna, S., &#38; Grier, D. G. (2016). Trochoidal
    trajectories of self-propelled Janus particles in a diverging laser beam. <i>Soft
    Matter</i>. Royal Society of Chemistry . <a href="https://doi.org/10.1039/c6sm01163b">https://doi.org/10.1039/c6sm01163b</a>
  chicago: Moyses, Henrique, Jérémie A Palacci, Stefano Sacanna, and David G. Grier.
    “Trochoidal Trajectories of Self-Propelled Janus Particles in a Diverging Laser
    Beam.” <i>Soft Matter</i>. Royal Society of Chemistry , 2016. <a href="https://doi.org/10.1039/c6sm01163b">https://doi.org/10.1039/c6sm01163b</a>.
  ieee: H. Moyses, J. A. Palacci, S. Sacanna, and D. G. Grier, “Trochoidal trajectories
    of self-propelled Janus particles in a diverging laser beam,” <i>Soft Matter</i>,
    vol. 12, no. 30. Royal Society of Chemistry , pp. 6357–6364, 2016.
  ista: Moyses H, Palacci JA, Sacanna S, Grier DG. 2016. Trochoidal trajectories of
    self-propelled Janus particles in a diverging laser beam. Soft Matter. 12(30),
    6357–6364.
  mla: Moyses, Henrique, et al. “Trochoidal Trajectories of Self-Propelled Janus Particles
    in a Diverging Laser Beam.” <i>Soft Matter</i>, vol. 12, no. 30, Royal Society
    of Chemistry , 2016, pp. 6357–64, doi:<a href="https://doi.org/10.1039/c6sm01163b">10.1039/c6sm01163b</a>.
  short: H. Moyses, J.A. Palacci, S. Sacanna, D.G. Grier, Soft Matter 12 (2016) 6357–6364.
date_created: 2021-02-01T13:44:15Z
date_published: 2016-08-14T00:00:00Z
date_updated: 2023-02-23T13:47:40Z
day: '14'
doi: 10.1039/c6sm01163b
extern: '1'
external_id:
  arxiv:
  - '1609.01497'
  pmid:
  - '27338294'
intvolume: '        12'
issue: '30'
keyword:
- General Chemistry
- Condensed Matter Physics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1609.01497
month: '08'
oa: 1
oa_version: Preprint
page: 6357-6364
pmid: 1
publication: Soft Matter
publication_identifier:
  eissn:
  - 1744-6848
  issn:
  - 1744-683X
publication_status: published
publisher: 'Royal Society of Chemistry '
quality_controlled: '1'
scopus_import: '1'
status: public
title: Trochoidal trajectories of self-propelled Janus particles in a diverging laser
  beam
type: journal_article
user_id: D865714E-FA4E-11E9-B85B-F5C5E5697425
volume: 12
year: '2016'
...
---
_id: '10381'
abstract:
- lang: eng
  text: We study phase behaviour of lipid-bilayer vesicles functionalised by ligand–receptor
    complexes made of synthetic DNA by introducing a modelling framework and a dedicated
    experimental platform. In particular, we perform Monte Carlo simulations that
    combine a coarse grained description of the lipid bilayer with state of art analytical
    models for multivalent ligand–receptor interactions. Using density of state calculations,
    we derive the partition function in pairs of vesicles and compute the number of
    ligand–receptor bonds as a function of temperature. Numerical results are compared
    to microscopy and fluorimetry experiments on large unilamellar vesicles decorated
    by DNA linkers carrying complementary overhangs. We find that vesicle aggregation
    is suppressed when the total number of linkers falls below a threshold value.
    Within the model proposed here, this is due to the higher configurational costs
    required to form inter-vesicle bridges as compared to intra-vesicle loops, which
    are in turn related to membrane deformability. Our findings and our numerical/experimental
    methodologies are applicable to the rational design of liposomes used as functional
    materials and drug delivery applications, as well as to study inter-membrane interactions
    in living systems, such as cell adhesion.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Stephan Jan
  full_name: Bachmann, Stephan Jan
  last_name: Bachmann
- first_name: Jurij
  full_name: Kotar, Jurij
  last_name: Kotar
- first_name: Lucia
  full_name: Parolini, Lucia
  last_name: Parolini
- first_name: Anđela
  full_name: Šarić, Anđela
  id: bf63d406-f056-11eb-b41d-f263a6566d8b
  last_name: Šarić
  orcid: 0000-0002-7854-2139
- first_name: Pietro
  full_name: Cicuta, Pietro
  last_name: Cicuta
- first_name: Lorenzo
  full_name: Di Michele, Lorenzo
  last_name: Di Michele
- first_name: Bortolo Matteo
  full_name: Mognetti, Bortolo Matteo
  last_name: Mognetti
citation:
  ama: Bachmann SJ, Kotar J, Parolini L, et al. Melting transition in lipid vesicles
    functionalised by mobile DNA linkers. <i>Soft Matter</i>. 2016;12(37):7804-7817.
    doi:<a href="https://doi.org/10.1039/c6sm01515h">10.1039/c6sm01515h</a>
  apa: Bachmann, S. J., Kotar, J., Parolini, L., Šarić, A., Cicuta, P., Di Michele,
    L., &#38; Mognetti, B. M. (2016). Melting transition in lipid vesicles functionalised
    by mobile DNA linkers. <i>Soft Matter</i>. Royal Society of Chemistry. <a href="https://doi.org/10.1039/c6sm01515h">https://doi.org/10.1039/c6sm01515h</a>
  chicago: Bachmann, Stephan Jan, Jurij Kotar, Lucia Parolini, Anđela Šarić, Pietro
    Cicuta, Lorenzo Di Michele, and Bortolo Matteo Mognetti. “Melting Transition in
    Lipid Vesicles Functionalised by Mobile DNA Linkers.” <i>Soft Matter</i>. Royal
    Society of Chemistry, 2016. <a href="https://doi.org/10.1039/c6sm01515h">https://doi.org/10.1039/c6sm01515h</a>.
  ieee: S. J. Bachmann <i>et al.</i>, “Melting transition in lipid vesicles functionalised
    by mobile DNA linkers,” <i>Soft Matter</i>, vol. 12, no. 37. Royal Society of
    Chemistry, pp. 7804–7817, 2016.
  ista: Bachmann SJ, Kotar J, Parolini L, Šarić A, Cicuta P, Di Michele L, Mognetti
    BM. 2016. Melting transition in lipid vesicles functionalised by mobile DNA linkers.
    Soft Matter. 12(37), 7804–7817.
  mla: Bachmann, Stephan Jan, et al. “Melting Transition in Lipid Vesicles Functionalised
    by Mobile DNA Linkers.” <i>Soft Matter</i>, vol. 12, no. 37, Royal Society of
    Chemistry, 2016, pp. 7804–17, doi:<a href="https://doi.org/10.1039/c6sm01515h">10.1039/c6sm01515h</a>.
  short: S.J. Bachmann, J. Kotar, L. Parolini, A. Šarić, P. Cicuta, L. Di Michele,
    B.M. Mognetti, Soft Matter 12 (2016) 7804–7817.
date_created: 2021-11-29T11:09:55Z
date_published: 2016-08-19T00:00:00Z
date_updated: 2021-11-29T13:09:00Z
day: '19'
doi: 10.1039/c6sm01515h
extern: '1'
external_id:
  arxiv:
  - '1608.05788'
  pmid:
  - '27722701'
intvolume: '        12'
issue: '37'
keyword:
- condensed matter physics
- general chemistry
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1608.05788
month: '08'
oa: 1
oa_version: Preprint
page: 7804-7817
pmid: 1
publication: Soft Matter
publication_identifier:
  eissn:
  - 1744-6848
  issn:
  - 1744-683X
publication_status: published
publisher: Royal Society of Chemistry
quality_controlled: '1'
scopus_import: '1'
status: public
title: Melting transition in lipid vesicles functionalised by mobile DNA linkers
type: journal_article
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 12
year: '2016'
...
---
_id: '13392'
abstract:
- lang: eng
  text: The chemical behaviour of molecules can be significantly modified by confinement
    to volumes comparable to the dimensions of the molecules. Although such confined
    spaces can be found in various nanostructured materials, such as zeolites, nanoporous
    organic frameworks and colloidal nanocrystal assemblies, the slow diffusion of
    molecules in and out of these materials has greatly hampered studying the effect
    of confinement on their physicochemical properties. Here, we show that this diffusion
    limitation can be overcome by reversibly creating and destroying confined environments
    by means of ultraviolet and visible light irradiation. We use colloidal nanocrystals
    functionalized with light-responsive ligands that readily self-assemble and trap
    various molecules from the surrounding bulk solution. Once trapped, these molecules
    can undergo chemical reactions with increased rates and with stereoselectivities
    significantly different from those in bulk solution. Illumination with visible
    light disassembles these nanoflasks, releasing the product in solution and thereby
    establishes a catalytic cycle. These dynamic nanoflasks can be useful for studying
    chemical reactivities in confined environments and for synthesizing molecules
    that are otherwise hard to achieve in bulk solution.
article_processing_charge: No
article_type: original
author:
- first_name: Hui
  full_name: Zhao, Hui
  last_name: Zhao
- first_name: Soumyo
  full_name: Sen, Soumyo
  last_name: Sen
- first_name: T.
  full_name: Udayabhaskararao, T.
  last_name: Udayabhaskararao
- first_name: Michał
  full_name: Sawczyk, Michał
  last_name: Sawczyk
- first_name: Kristina
  full_name: Kučanda, Kristina
  last_name: Kučanda
- first_name: Debasish
  full_name: Manna, Debasish
  last_name: Manna
- first_name: Pintu K.
  full_name: Kundu, Pintu K.
  last_name: Kundu
- first_name: Ji-Woong
  full_name: Lee, Ji-Woong
  last_name: Lee
- first_name: Petr
  full_name: Král, Petr
  last_name: Král
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
citation:
  ama: Zhao H, Sen S, Udayabhaskararao T, et al. Reversible trapping and reaction
    acceleration within dynamically self-assembling nanoflasks. <i>Nature Nanotechnology</i>.
    2015;11:82-88. doi:<a href="https://doi.org/10.1038/nnano.2015.256">10.1038/nnano.2015.256</a>
  apa: Zhao, H., Sen, S., Udayabhaskararao, T., Sawczyk, M., Kučanda, K., Manna, D.,
    … Klajn, R. (2015). Reversible trapping and reaction acceleration within dynamically
    self-assembling nanoflasks. <i>Nature Nanotechnology</i>. Springer Nature. <a
    href="https://doi.org/10.1038/nnano.2015.256">https://doi.org/10.1038/nnano.2015.256</a>
  chicago: Zhao, Hui, Soumyo Sen, T. Udayabhaskararao, Michał Sawczyk, Kristina Kučanda,
    Debasish Manna, Pintu K. Kundu, Ji-Woong Lee, Petr Král, and Rafal Klajn. “Reversible
    Trapping and Reaction Acceleration within Dynamically Self-Assembling Nanoflasks.”
    <i>Nature Nanotechnology</i>. Springer Nature, 2015. <a href="https://doi.org/10.1038/nnano.2015.256">https://doi.org/10.1038/nnano.2015.256</a>.
  ieee: H. Zhao <i>et al.</i>, “Reversible trapping and reaction acceleration within
    dynamically self-assembling nanoflasks,” <i>Nature Nanotechnology</i>, vol. 11.
    Springer Nature, pp. 82–88, 2015.
  ista: Zhao H, Sen S, Udayabhaskararao T, Sawczyk M, Kučanda K, Manna D, Kundu PK,
    Lee J-W, Král P, Klajn R. 2015. Reversible trapping and reaction acceleration
    within dynamically self-assembling nanoflasks. Nature Nanotechnology. 11, 82–88.
  mla: Zhao, Hui, et al. “Reversible Trapping and Reaction Acceleration within Dynamically
    Self-Assembling Nanoflasks.” <i>Nature Nanotechnology</i>, vol. 11, Springer Nature,
    2015, pp. 82–88, doi:<a href="https://doi.org/10.1038/nnano.2015.256">10.1038/nnano.2015.256</a>.
  short: H. Zhao, S. Sen, T. Udayabhaskararao, M. Sawczyk, K. Kučanda, D. Manna, P.K.
    Kundu, J.-W. Lee, P. Král, R. Klajn, Nature Nanotechnology 11 (2015) 82–88.
date_created: 2023-08-01T09:44:04Z
date_published: 2015-11-23T00:00:00Z
date_updated: 2023-08-07T12:55:46Z
day: '23'
doi: 10.1038/nnano.2015.256
extern: '1'
external_id:
  pmid:
  - '26595335'
intvolume: '        11'
keyword:
- Electrical and Electronic Engineering
- Condensed Matter Physics
- General Materials Science
- Biomedical Engineering
- Atomic and Molecular Physics
- and Optics
- Bioengineering
language:
- iso: eng
month: '11'
oa_version: None
page: 82-88
pmid: 1
publication: Nature Nanotechnology
publication_identifier:
  eissn:
  - 1748-3395
  issn:
  - 1748-3387
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Reversible trapping and reaction acceleration within dynamically self-assembling
  nanoflasks
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 11
year: '2015'
...
---
_id: '13396'
abstract:
- lang: eng
  text: 'Photoswitching in densely packed azobenzene self-assembled monolayers (SAMs)
    is strongly affected by steric constraints and excitonic coupling between neighboring
    chromophores. Therefore, control of the chromophore density is essential for enhancing
    and manipulating the photoisomerization yield. We systematically compare two methods
    to achieve this goal: First, we assemble monocomponent azobenzene–alkanethiolate
    SAMs on gold nanoparticles of varying size. Second, we form mixed SAMs of azobenzene–alkanethiolates
    and “dummy” alkanethiolates on planar substrates. Both methods lead to a gradual
    decrease of the chromophore density and enable efficient photoswitching with low-power
    light sources. X-ray spectroscopy reveals that coadsorption from solution yields
    mixtures with tunable composition. The orientation of the chromophores with respect
    to the surface normal changes from a tilted to an upright position with increasing
    azobenzene density. For both systems, optical spectroscopy reveals a pronounced
    excitonic shift that increases with the chromophore density. In spite of exciting
    the optical transition of the monomer, the main spectral change in mixed SAMs
    occurs in the excitonic band. In addition, the photoisomerization yield decreases
    only slightly by increasing the azobenzene–alkanethiolate density, and we observed
    photoswitching even with minor dilutions. Unlike in solution, azobenzene in the
    planar SAM can be switched back almost completely by optical excitation from the
    cis to the original trans state within a short time scale. These observations
    indicate cooperativity in the photoswitching process of mixed SAMs.'
article_processing_charge: No
article_type: original
author:
- first_name: Thomas
  full_name: Moldt, Thomas
  last_name: Moldt
- first_name: Daniel
  full_name: Brete, Daniel
  last_name: Brete
- first_name: Daniel
  full_name: Przyrembel, Daniel
  last_name: Przyrembel
- first_name: Sanjib
  full_name: Das, Sanjib
  last_name: Das
- first_name: Joel R.
  full_name: Goldman, Joel R.
  last_name: Goldman
- first_name: Pintu K.
  full_name: Kundu, Pintu K.
  last_name: Kundu
- first_name: Cornelius
  full_name: Gahl, Cornelius
  last_name: Gahl
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
- first_name: Martin
  full_name: Weinelt, Martin
  last_name: Weinelt
citation:
  ama: Moldt T, Brete D, Przyrembel D, et al. Tailoring the properties of surface-immobilized
    azobenzenes by monolayer dilution and surface curvature. <i>Langmuir</i>. 2015;31(3):1048-1057.
    doi:<a href="https://doi.org/10.1021/la504291n">10.1021/la504291n</a>
  apa: Moldt, T., Brete, D., Przyrembel, D., Das, S., Goldman, J. R., Kundu, P. K.,
    … Weinelt, M. (2015). Tailoring the properties of surface-immobilized azobenzenes
    by monolayer dilution and surface curvature. <i>Langmuir</i>. American Chemical
    Society. <a href="https://doi.org/10.1021/la504291n">https://doi.org/10.1021/la504291n</a>
  chicago: Moldt, Thomas, Daniel Brete, Daniel Przyrembel, Sanjib Das, Joel R. Goldman,
    Pintu K. Kundu, Cornelius Gahl, Rafal Klajn, and Martin Weinelt. “Tailoring the
    Properties of Surface-Immobilized Azobenzenes by Monolayer Dilution and Surface
    Curvature.” <i>Langmuir</i>. American Chemical Society, 2015. <a href="https://doi.org/10.1021/la504291n">https://doi.org/10.1021/la504291n</a>.
  ieee: T. Moldt <i>et al.</i>, “Tailoring the properties of surface-immobilized azobenzenes
    by monolayer dilution and surface curvature,” <i>Langmuir</i>, vol. 31, no. 3.
    American Chemical Society, pp. 1048–1057, 2015.
  ista: Moldt T, Brete D, Przyrembel D, Das S, Goldman JR, Kundu PK, Gahl C, Klajn
    R, Weinelt M. 2015. Tailoring the properties of surface-immobilized azobenzenes
    by monolayer dilution and surface curvature. Langmuir. 31(3), 1048–1057.
  mla: Moldt, Thomas, et al. “Tailoring the Properties of Surface-Immobilized Azobenzenes
    by Monolayer Dilution and Surface Curvature.” <i>Langmuir</i>, vol. 31, no. 3,
    American Chemical Society, 2015, pp. 1048–57, doi:<a href="https://doi.org/10.1021/la504291n">10.1021/la504291n</a>.
  short: T. Moldt, D. Brete, D. Przyrembel, S. Das, J.R. Goldman, P.K. Kundu, C. Gahl,
    R. Klajn, M. Weinelt, Langmuir 31 (2015) 1048–1057.
date_created: 2023-08-01T09:45:02Z
date_published: 2015-01-27T00:00:00Z
date_updated: 2023-08-07T13:05:04Z
day: '27'
doi: 10.1021/la504291n
extern: '1'
external_id:
  pmid:
  - '25544061'
intvolume: '        31'
issue: '3'
keyword:
- Electrochemistry
- Spectroscopy
- Surfaces and Interfaces
- Condensed Matter Physics
- General Materials Science
language:
- iso: eng
month: '01'
oa_version: None
page: 1048-1057
pmid: 1
publication: Langmuir
publication_identifier:
  eissn:
  - 1520-5827
  issn:
  - 0743-7463
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Tailoring the properties of surface-immobilized azobenzenes by monolayer dilution
  and surface curvature
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 31
year: '2015'
...
---
_id: '14021'
abstract:
- lang: eng
  text: We present the detailed analysis of a new two-pulse orientation scheme that
    achieves macroscopic field-free orientation at the high particle densities required
    for attosecond and high-harmonic spectroscopies (Kraus et al 2013 arXiv:1311.3923).
    Carbon monoxide molecules are oriented by combining one-colour and delayed two-colour
    non-resonant femtosecond laser pulses. High-harmonic generation is used to probe
    the oriented wave-packet dynamics and reveals that a very high degree of orientation
    (Nup/Ntotal = 0.73–0.82) is achieved. We further extend this approach to orienting
    carbonyl sulphide molecules. We show that the present two-pulse scheme selectively
    enhances orientation created by the hyperpolarizability interaction whereas the
    ionization-depletion mechanism plays no role. We further control and optimize
    orientation through the delay between the one- and two-colour pump pulses. Finally,
    we demonstrate a complementary encoding of electronic-structure features, such
    as shape resonances, in the even- and odd-harmonic spectrum. The achieved progress
    makes two-pulse field-free orientation an attractive tool for a broad class of
    time-resolved measurements.
article_number: '124030'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: P M
  full_name: Kraus, P M
  last_name: Kraus
- first_name: Denitsa Rangelova
  full_name: Baykusheva, Denitsa Rangelova
  id: 71b4d059-2a03-11ee-914d-dfa3beed6530
  last_name: Baykusheva
- first_name: H J
  full_name: Wörner, H J
  last_name: Wörner
citation:
  ama: 'Kraus PM, Baykusheva DR, Wörner HJ. Two-pulse orientation dynamics and high-harmonic
    spectroscopy of strongly-oriented molecules. <i>Journal of Physics B: Atomic,
    Molecular and Optical Physics</i>. 2014;47(12). doi:<a href="https://doi.org/10.1088/0953-4075/47/12/124030">10.1088/0953-4075/47/12/124030</a>'
  apa: 'Kraus, P. M., Baykusheva, D. R., &#38; Wörner, H. J. (2014). Two-pulse orientation
    dynamics and high-harmonic spectroscopy of strongly-oriented molecules. <i>Journal
    of Physics B: Atomic, Molecular and Optical Physics</i>. IOP Publishing. <a href="https://doi.org/10.1088/0953-4075/47/12/124030">https://doi.org/10.1088/0953-4075/47/12/124030</a>'
  chicago: 'Kraus, P M, Denitsa Rangelova Baykusheva, and H J Wörner. “Two-Pulse Orientation
    Dynamics and High-Harmonic Spectroscopy of Strongly-Oriented Molecules.” <i>Journal
    of Physics B: Atomic, Molecular and Optical Physics</i>. IOP Publishing, 2014.
    <a href="https://doi.org/10.1088/0953-4075/47/12/124030">https://doi.org/10.1088/0953-4075/47/12/124030</a>.'
  ieee: 'P. M. Kraus, D. R. Baykusheva, and H. J. Wörner, “Two-pulse orientation dynamics
    and high-harmonic spectroscopy of strongly-oriented molecules,” <i>Journal of
    Physics B: Atomic, Molecular and Optical Physics</i>, vol. 47, no. 12. IOP Publishing,
    2014.'
  ista: 'Kraus PM, Baykusheva DR, Wörner HJ. 2014. Two-pulse orientation dynamics
    and high-harmonic spectroscopy of strongly-oriented molecules. Journal of Physics
    B: Atomic, Molecular and Optical Physics. 47(12), 124030.'
  mla: 'Kraus, P. M., et al. “Two-Pulse Orientation Dynamics and High-Harmonic Spectroscopy
    of Strongly-Oriented Molecules.” <i>Journal of Physics B: Atomic, Molecular and
    Optical Physics</i>, vol. 47, no. 12, 124030, IOP Publishing, 2014, doi:<a href="https://doi.org/10.1088/0953-4075/47/12/124030">10.1088/0953-4075/47/12/124030</a>.'
  short: 'P.M. Kraus, D.R. Baykusheva, H.J. Wörner, Journal of Physics B: Atomic,
    Molecular and Optical Physics 47 (2014).'
date_created: 2023-08-10T06:38:48Z
date_published: 2014-06-10T00:00:00Z
date_updated: 2023-08-22T09:04:30Z
day: '10'
doi: 10.1088/0953-4075/47/12/124030
extern: '1'
external_id:
  arxiv:
  - '1311.3923'
intvolume: '        47'
issue: '12'
keyword:
- Condensed Matter Physics
- Atomic and Molecular Physics
- and Optics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1311.3923
month: '06'
oa: 1
oa_version: Preprint
publication: 'Journal of Physics B: Atomic, Molecular and Optical Physics'
publication_identifier:
  eissn:
  - 1361-6455
  issn:
  - 0953-4075
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Two-pulse orientation dynamics and high-harmonic spectroscopy of strongly-oriented
  molecules
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 47
year: '2014'
...
---
_id: '9050'
abstract:
- lang: eng
  text: Self-propelled particles can exhibit surprising non-equilibrium behaviors,
    and how they interact with obstacles or boundaries remains an important open problem.
    Here we show that chemically propelled micro-rods can be captured, with little
    change in their speed, into close orbits around solid spheres resting on or near
    a horizontal plane. We show that this interaction between sphere and particle
    is short-range, occurring even for spheres smaller than the particle length, and
    for a variety of sphere materials. We consider a simple model, based on lubrication
    theory, of a force- and torque-free swimmer driven by a surface slip (the phoretic
    propulsion mechanism) and moving near a solid surface. The model demonstrates
    capture, or movement towards the surface, and yields speeds independent of distance.
    This study reveals the crucial aspects of activity–driven interactions of self-propelled
    particles with passive objects, and brings into question the use of colloidal
    tracers as probes of active matter.
article_number: '1784'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Daisuke
  full_name: Takagi, Daisuke
  last_name: Takagi
- first_name: Jérémie A
  full_name: Palacci, Jérémie A
  id: 8fb92548-2b22-11eb-b7c1-a3f0d08d7c7d
  last_name: Palacci
  orcid: 0000-0002-7253-9465
- first_name: Adam B.
  full_name: Braunschweig, Adam B.
  last_name: Braunschweig
- first_name: Michael J.
  full_name: Shelley, Michael J.
  last_name: Shelley
- first_name: Jun
  full_name: Zhang, Jun
  last_name: Zhang
citation:
  ama: Takagi D, Palacci JA, Braunschweig AB, Shelley MJ, Zhang J. Hydrodynamic capture
    of microswimmers into sphere-bound orbits. <i>Soft Matter</i>. 2014;10(11). doi:<a
    href="https://doi.org/10.1039/c3sm52815d">10.1039/c3sm52815d</a>
  apa: Takagi, D., Palacci, J. A., Braunschweig, A. B., Shelley, M. J., &#38; Zhang,
    J. (2014). Hydrodynamic capture of microswimmers into sphere-bound orbits. <i>Soft
    Matter</i>. Royal Society of Chemistry . <a href="https://doi.org/10.1039/c3sm52815d">https://doi.org/10.1039/c3sm52815d</a>
  chicago: Takagi, Daisuke, Jérémie A Palacci, Adam B. Braunschweig, Michael J. Shelley,
    and Jun Zhang. “Hydrodynamic Capture of Microswimmers into Sphere-Bound Orbits.”
    <i>Soft Matter</i>. Royal Society of Chemistry , 2014. <a href="https://doi.org/10.1039/c3sm52815d">https://doi.org/10.1039/c3sm52815d</a>.
  ieee: D. Takagi, J. A. Palacci, A. B. Braunschweig, M. J. Shelley, and J. Zhang,
    “Hydrodynamic capture of microswimmers into sphere-bound orbits,” <i>Soft Matter</i>,
    vol. 10, no. 11. Royal Society of Chemistry , 2014.
  ista: Takagi D, Palacci JA, Braunschweig AB, Shelley MJ, Zhang J. 2014. Hydrodynamic
    capture of microswimmers into sphere-bound orbits. Soft Matter. 10(11), 1784.
  mla: Takagi, Daisuke, et al. “Hydrodynamic Capture of Microswimmers into Sphere-Bound
    Orbits.” <i>Soft Matter</i>, vol. 10, no. 11, 1784, Royal Society of Chemistry
    , 2014, doi:<a href="https://doi.org/10.1039/c3sm52815d">10.1039/c3sm52815d</a>.
  short: D. Takagi, J.A. Palacci, A.B. Braunschweig, M.J. Shelley, J. Zhang, Soft
    Matter 10 (2014).
date_created: 2021-02-01T13:43:31Z
date_published: 2014-03-21T00:00:00Z
date_updated: 2023-02-23T13:47:35Z
day: '21'
doi: 10.1039/c3sm52815d
extern: '1'
external_id:
  arxiv:
  - '1309.5662'
  pmid:
  - '24800268'
intvolume: '        10'
issue: '11'
keyword:
- General Chemistry
- Condensed Matter Physics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1309.5662
month: '03'
oa: 1
oa_version: Preprint
pmid: 1
publication: Soft Matter
publication_identifier:
  eissn:
  - 1744-6848
  issn:
  - 1744-683X
publication_status: published
publisher: 'Royal Society of Chemistry '
quality_controlled: '1'
scopus_import: '1'
status: public
title: Hydrodynamic capture of microswimmers into sphere-bound orbits
type: journal_article
user_id: D865714E-FA4E-11E9-B85B-F5C5E5697425
volume: 10
year: '2014'
...
---
_id: '10385'
abstract:
- lang: eng
  text: We show how self-assembly of sticky nanoparticles can drive radial collapse
    of thin-walled nanotubes. Using numerical simulations, we study the transition
    as a function of the geometric and elastic parameters of the nanotube and the
    binding strength of the nanoparticles. We find that it is possible to derive a
    simple scaling law relating all these parameters, and estimate bounds for the
    onset conditions leading to the collapse of the nanotube. We also study the reverse
    process – the nanoparticle release from the folded state – and find that the stability
    of the collapsed state can be greatly improved by increasing the bending rigidity
    of the nanotubes. Our results suggest ways to strengthen the mechanical properties
    of nanotubes, but also indicate that the control of nanoparticle self-assembly
    on these nanotubes can lead to nanoparticle-laden responsive materials.
acknowledgement: This work was supported by the National Science Foundation under
  Career Grant no. DMR-0846426.
article_processing_charge: No
article_type: original
author:
- first_name: Joseph A.
  full_name: Napoli, Joseph A.
  last_name: Napoli
- first_name: Anđela
  full_name: Šarić, Anđela
  id: bf63d406-f056-11eb-b41d-f263a6566d8b
  last_name: Šarić
  orcid: 0000-0002-7854-2139
- first_name: Angelo
  full_name: Cacciuto, Angelo
  last_name: Cacciuto
citation:
  ama: Napoli JA, Šarić A, Cacciuto A. Collapsing nanoparticle-laden nanotubes. <i>Soft
    Matter</i>. 2013;9(37):8881-8886. doi:<a href="https://doi.org/10.1039/c3sm51495a">10.1039/c3sm51495a</a>
  apa: Napoli, J. A., Šarić, A., &#38; Cacciuto, A. (2013). Collapsing nanoparticle-laden
    nanotubes. <i>Soft Matter</i>. Royal Society of Chemistry. <a href="https://doi.org/10.1039/c3sm51495a">https://doi.org/10.1039/c3sm51495a</a>
  chicago: Napoli, Joseph A., Anđela Šarić, and Angelo Cacciuto. “Collapsing Nanoparticle-Laden
    Nanotubes.” <i>Soft Matter</i>. Royal Society of Chemistry, 2013. <a href="https://doi.org/10.1039/c3sm51495a">https://doi.org/10.1039/c3sm51495a</a>.
  ieee: J. A. Napoli, A. Šarić, and A. Cacciuto, “Collapsing nanoparticle-laden nanotubes,”
    <i>Soft Matter</i>, vol. 9, no. 37. Royal Society of Chemistry, pp. 8881–8886,
    2013.
  ista: Napoli JA, Šarić A, Cacciuto A. 2013. Collapsing nanoparticle-laden nanotubes.
    Soft Matter. 9(37), 8881–8886.
  mla: Napoli, Joseph A., et al. “Collapsing Nanoparticle-Laden Nanotubes.” <i>Soft
    Matter</i>, vol. 9, no. 37, Royal Society of Chemistry, 2013, pp. 8881–86, doi:<a
    href="https://doi.org/10.1039/c3sm51495a">10.1039/c3sm51495a</a>.
  short: J.A. Napoli, A. Šarić, A. Cacciuto, Soft Matter 9 (2013) 8881–8886.
date_created: 2021-11-29T13:31:24Z
date_published: 2013-08-08T00:00:00Z
date_updated: 2021-11-29T14:05:23Z
day: '08'
doi: 10.1039/c3sm51495a
extern: '1'
intvolume: '         9'
issue: '37'
keyword:
- condensed matter physics
- general chemistry
language:
- iso: eng
month: '08'
oa_version: None
page: 8881-8886
publication: Soft Matter
publication_identifier:
  eissn:
  - 1744-6848
  issn:
  - 1744-683X
publication_status: published
publisher: Royal Society of Chemistry
quality_controlled: '1'
scopus_import: '1'
status: public
title: Collapsing nanoparticle-laden nanotubes
type: journal_article
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 9
year: '2013'
...
---
_id: '10386'
abstract:
- lang: eng
  text: In this paper we review recent numerical and theoretical developments of particle
    self-assembly on fluid and elastic membranes and compare them to available experimental
    realizations. We discuss the problem and its applications in biology and materials
    science, and give an overview of numerical models and strategies to study these
    systems across all length-scales. As this is a very broad field, this review focuses
    exclusively on surface-driven aggregation of nanoparticles that are at least one
    order of magnitude larger than the surface thickness and are adsorbed onto it.
    In this regime, all chemical details of the surface can be ignored in favor of
    a coarse-grained representation, and the collective behavior of many particles
    can be monitored and analyzed. We review the existing literature on how the mechanical
    properties and the geometry of the surface affect the structure of the particle
    aggregates and how these can drive shape deformation on the surface.
acknowledgement: This work was supported by the National Science Foundation under
  Career Grant No. DMR 0846426. The authors thank J. C. Pàmies for many fruitful discussions
  on the subject.
article_number: '6677'
article_processing_charge: No
article_type: original
author:
- first_name: Anđela
  full_name: Šarić, Anđela
  id: bf63d406-f056-11eb-b41d-f263a6566d8b
  last_name: Šarić
  orcid: 0000-0002-7854-2139
- first_name: Angelo
  full_name: Cacciuto, Angelo
  last_name: Cacciuto
citation:
  ama: Šarić A, Cacciuto A. Self-assembly of nanoparticles adsorbed on fluid and elastic
    membranes. <i>Soft Matter</i>. 2013;9(29). doi:<a href="https://doi.org/10.1039/c3sm50188d">10.1039/c3sm50188d</a>
  apa: Šarić, A., &#38; Cacciuto, A. (2013). Self-assembly of nanoparticles adsorbed
    on fluid and elastic membranes. <i>Soft Matter</i>. Royal Society of Chemistry.
    <a href="https://doi.org/10.1039/c3sm50188d">https://doi.org/10.1039/c3sm50188d</a>
  chicago: Šarić, Anđela, and Angelo Cacciuto. “Self-Assembly of Nanoparticles Adsorbed
    on Fluid and Elastic Membranes.” <i>Soft Matter</i>. Royal Society of Chemistry,
    2013. <a href="https://doi.org/10.1039/c3sm50188d">https://doi.org/10.1039/c3sm50188d</a>.
  ieee: A. Šarić and A. Cacciuto, “Self-assembly of nanoparticles adsorbed on fluid
    and elastic membranes,” <i>Soft Matter</i>, vol. 9, no. 29. Royal Society of Chemistry,
    2013.
  ista: Šarić A, Cacciuto A. 2013. Self-assembly of nanoparticles adsorbed on fluid
    and elastic membranes. Soft Matter. 9(29), 6677.
  mla: Šarić, Anđela, and Angelo Cacciuto. “Self-Assembly of Nanoparticles Adsorbed
    on Fluid and Elastic Membranes.” <i>Soft Matter</i>, vol. 9, no. 29, 6677, Royal
    Society of Chemistry, 2013, doi:<a href="https://doi.org/10.1039/c3sm50188d">10.1039/c3sm50188d</a>.
  short: A. Šarić, A. Cacciuto, Soft Matter 9 (2013).
date_created: 2021-11-29T14:06:32Z
date_published: 2013-05-03T00:00:00Z
date_updated: 2021-11-29T14:29:31Z
day: '03'
doi: 10.1039/c3sm50188d
extern: '1'
intvolume: '         9'
issue: '29'
keyword:
- condensed matter physics
- general chemistry
language:
- iso: eng
main_file_link:
- url: https://pubs.rsc.org/en/content/articlehtml/2013/sm/c3sm50188d
month: '05'
oa_version: None
publication: Soft Matter
publication_identifier:
  eissn:
  - 1744-6848
  issn:
  - 1744-683X
publication_status: published
publisher: Royal Society of Chemistry
quality_controlled: '1'
scopus_import: '1'
status: public
title: Self-assembly of nanoparticles adsorbed on fluid and elastic membranes
type: journal_article
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 9
year: '2013'
...
---
_id: '8469'
abstract:
- lang: eng
  text: The accurate experimental determination of dipolar-coupling constants for
    one-bond heteronuclear dipolar couplings in solids is a key for the quantification
    of the amplitudes of motional processes. Averaging of the dipolar coupling reports
    on motions on time scales up to the inverse of the coupling constant, in our case
    tens of microseconds. Combining dipolar-coupling derived order parameters that
    characterize the amplitudes of the motion with relaxation data leads to a more
    precise characterization of the dynamical parameters and helps to disentangle
    the amplitudes and the time scales of the motional processes, which impact relaxation
    rates in a highly correlated way. Here. we describe and characterize an improved
    experimental protocol – based on REDOR – to measure these couplings in perdeuterated
    proteins with a reduced sensitivity to experimental missettings. Because such
    effects are presently the dominant source of systematic errors in experimental
    dipolar-coupling measurements, these compensated experiments should help to significantly
    improve the precision of such data. A detailed comparison with other commonly
    used pulse sequences (T-MREV, phase-inverted CP,R18 5/2, and R18 7/1) is provided.
article_processing_charge: No
article_type: original
author:
- first_name: Paul
  full_name: Schanda, Paul
  id: 7B541462-FAF6-11E9-A490-E8DFE5697425
  last_name: Schanda
  orcid: 0000-0002-9350-7606
- first_name: Beat H.
  full_name: Meier, Beat H.
  last_name: Meier
- first_name: Matthias
  full_name: Ernst, Matthias
  last_name: Ernst
citation:
  ama: Schanda P, Meier BH, Ernst M. Accurate measurement of one-bond H–X heteronuclear
    dipolar couplings in MAS solid-state NMR. <i>Journal of Magnetic Resonance</i>.
    2011;210(2):246-259. doi:<a href="https://doi.org/10.1016/j.jmr.2011.03.015">10.1016/j.jmr.2011.03.015</a>
  apa: Schanda, P., Meier, B. H., &#38; Ernst, M. (2011). Accurate measurement of
    one-bond H–X heteronuclear dipolar couplings in MAS solid-state NMR. <i>Journal
    of Magnetic Resonance</i>. Elsevier. <a href="https://doi.org/10.1016/j.jmr.2011.03.015">https://doi.org/10.1016/j.jmr.2011.03.015</a>
  chicago: Schanda, Paul, Beat H. Meier, and Matthias Ernst. “Accurate Measurement
    of One-Bond H–X Heteronuclear Dipolar Couplings in MAS Solid-State NMR.” <i>Journal
    of Magnetic Resonance</i>. Elsevier, 2011. <a href="https://doi.org/10.1016/j.jmr.2011.03.015">https://doi.org/10.1016/j.jmr.2011.03.015</a>.
  ieee: P. Schanda, B. H. Meier, and M. Ernst, “Accurate measurement of one-bond H–X
    heteronuclear dipolar couplings in MAS solid-state NMR,” <i>Journal of Magnetic
    Resonance</i>, vol. 210, no. 2. Elsevier, pp. 246–259, 2011.
  ista: Schanda P, Meier BH, Ernst M. 2011. Accurate measurement of one-bond H–X heteronuclear
    dipolar couplings in MAS solid-state NMR. Journal of Magnetic Resonance. 210(2),
    246–259.
  mla: Schanda, Paul, et al. “Accurate Measurement of One-Bond H–X Heteronuclear Dipolar
    Couplings in MAS Solid-State NMR.” <i>Journal of Magnetic Resonance</i>, vol.
    210, no. 2, Elsevier, 2011, pp. 246–59, doi:<a href="https://doi.org/10.1016/j.jmr.2011.03.015">10.1016/j.jmr.2011.03.015</a>.
  short: P. Schanda, B.H. Meier, M. Ernst, Journal of Magnetic Resonance 210 (2011)
    246–259.
date_created: 2020-09-18T10:10:50Z
date_published: 2011-06-01T00:00:00Z
date_updated: 2021-01-12T08:19:29Z
day: '01'
doi: 10.1016/j.jmr.2011.03.015
extern: '1'
intvolume: '       210'
issue: '2'
keyword:
- Nuclear and High Energy Physics
- Biophysics
- Biochemistry
- Condensed Matter Physics
language:
- iso: eng
month: '06'
oa_version: None
page: 246-259
publication: Journal of Magnetic Resonance
publication_identifier:
  issn:
  - 1090-7807
publication_status: published
publisher: Elsevier
quality_controlled: '1'
status: public
title: Accurate measurement of one-bond H–X heteronuclear dipolar couplings in MAS
  solid-state NMR
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 210
year: '2011'
...
---
_id: '10389'
abstract:
- lang: eng
  text: We perform numerical simulations to study self-assembly of nanoparticles mediated
    by an elastic planar surface. We show how the nontrivial elastic response to deformations
    of these surfaces leads to anisotropic interactions between the particles resulting
    in aggregates having different geometrical features. The morphology of the patterns
    can be controlled by the mechanical properties of the surface and the strength
    of the particle adhesion. We use simple scaling arguments to understand the formation
    of the different structures, and we show how the adhering particles can cause
    the underlying elastic substrate to wrinkle if two of its opposite edges are clamped.
    Finally, we discuss the implications of our results and suggest how elastic surfaces
    could be used in nanofabrication.
acknowledgement: This work was supported by the National Science Foundation under
  Career Grant No. DMR-0846426. We thank Josep C. Pàmies and William L. Miller for
  helpful discussions.
article_number: '8324'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Anđela
  full_name: Šarić, Anđela
  id: bf63d406-f056-11eb-b41d-f263a6566d8b
  last_name: Šarić
  orcid: 0000-0002-7854-2139
- first_name: Angelo
  full_name: Cacciuto, Angelo
  last_name: Cacciuto
citation:
  ama: Šarić A, Cacciuto A. Soft elastic surfaces as a platform for particle self-assembly.
    <i>Soft Matter</i>. 2011;7(18). doi:<a href="https://doi.org/10.1039/c1sm05773a">10.1039/c1sm05773a</a>
  apa: Šarić, A., &#38; Cacciuto, A. (2011). Soft elastic surfaces as a platform for
    particle self-assembly. <i>Soft Matter</i>. Royal Society of Chemistry. <a href="https://doi.org/10.1039/c1sm05773a">https://doi.org/10.1039/c1sm05773a</a>
  chicago: Šarić, Anđela, and Angelo Cacciuto. “Soft Elastic Surfaces as a Platform
    for Particle Self-Assembly.” <i>Soft Matter</i>. Royal Society of Chemistry, 2011.
    <a href="https://doi.org/10.1039/c1sm05773a">https://doi.org/10.1039/c1sm05773a</a>.
  ieee: A. Šarić and A. Cacciuto, “Soft elastic surfaces as a platform for particle
    self-assembly,” <i>Soft Matter</i>, vol. 7, no. 18. Royal Society of Chemistry,
    2011.
  ista: Šarić A, Cacciuto A. 2011. Soft elastic surfaces as a platform for particle
    self-assembly. Soft Matter. 7(18), 8324.
  mla: Šarić, Anđela, and Angelo Cacciuto. “Soft Elastic Surfaces as a Platform for
    Particle Self-Assembly.” <i>Soft Matter</i>, vol. 7, no. 18, 8324, Royal Society
    of Chemistry, 2011, doi:<a href="https://doi.org/10.1039/c1sm05773a">10.1039/c1sm05773a</a>.
  short: A. Šarić, A. Cacciuto, Soft Matter 7 (2011).
date_created: 2021-11-29T14:33:18Z
date_published: 2011-08-08T00:00:00Z
date_updated: 2021-11-29T15:12:10Z
day: '08'
doi: 10.1039/c1sm05773a
extern: '1'
external_id:
  arxiv:
  - '1106.2995'
intvolume: '         7'
issue: '18'
keyword:
- condensed matter physics
- general chemistry
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1106.2995
month: '08'
oa: 1
oa_version: Preprint
publication: Soft Matter
publication_identifier:
  eissn:
  - 1744-6848
  issn:
  - 1744-683X
publication_status: published
publisher: Royal Society of Chemistry
quality_controlled: '1'
scopus_import: '1'
status: public
title: Soft elastic surfaces as a platform for particle self-assembly
type: journal_article
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 7
year: '2011'
...
---
_id: '10127'
abstract:
- lang: eng
  text: We use numerical simulations to show how noninteracting hard particles binding
    to a deformable elastic shell may self-assemble into a variety of linear patterns.
    This is a result of the nontrivial elastic response to deformations of shells.
    The morphology of the patterns can be controlled by the mechanical properties
    of the surface, and can be fine-tuned by varying the binding energy of the particles.
    We also repeat our calculations for a fully flexible chain and find that the chain
    conformations follow patterns similar to those formed by the nanoparticles under
    analogous conditions. We propose a simple way of understanding and sorting the
    different structures and relate it to the underlying shape transition of the shell.
    Finally, we discuss the implications of our results.
acknowledgement: This work was supported by the National Science Foundation under
  Career Grant No. DMR-0846426. We thank Josep C. Pàmies for helpful discussions.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Anđela
  full_name: Šarić, Anđela
  id: bf63d406-f056-11eb-b41d-f263a6566d8b
  last_name: Šarić
  orcid: 0000-0002-7854-2139
- first_name: Angelo
  full_name: Cacciuto, Angelo
  last_name: Cacciuto
citation:
  ama: Šarić A, Cacciuto A. Particle self-assembly on soft elastic shells. <i>Soft
    Matter</i>. 2010;7(5):1874-1878. doi:<a href="https://doi.org/10.1039/c0sm01143f">10.1039/c0sm01143f</a>
  apa: Šarić, A., &#38; Cacciuto, A. (2010). Particle self-assembly on soft elastic
    shells. <i>Soft Matter</i>. Royal Society of Chemistry (RSC). <a href="https://doi.org/10.1039/c0sm01143f">https://doi.org/10.1039/c0sm01143f</a>
  chicago: Šarić, Anđela, and Angelo Cacciuto. “Particle Self-Assembly on Soft Elastic
    Shells.” <i>Soft Matter</i>. Royal Society of Chemistry (RSC), 2010. <a href="https://doi.org/10.1039/c0sm01143f">https://doi.org/10.1039/c0sm01143f</a>.
  ieee: A. Šarić and A. Cacciuto, “Particle self-assembly on soft elastic shells,”
    <i>Soft Matter</i>, vol. 7, no. 5. Royal Society of Chemistry (RSC), pp. 1874–1878,
    2010.
  ista: Šarić A, Cacciuto A. 2010. Particle self-assembly on soft elastic shells.
    Soft Matter. 7(5), 1874–1878.
  mla: Šarić, Anđela, and Angelo Cacciuto. “Particle Self-Assembly on Soft Elastic
    Shells.” <i>Soft Matter</i>, vol. 7, no. 5, Royal Society of Chemistry (RSC),
    2010, pp. 1874–78, doi:<a href="https://doi.org/10.1039/c0sm01143f">10.1039/c0sm01143f</a>.
  short: A. Šarić, A. Cacciuto, Soft Matter 7 (2010) 1874–1878.
date_created: 2021-10-12T08:34:23Z
date_published: 2010-12-23T00:00:00Z
date_updated: 2021-10-12T09:49:27Z
day: '23'
doi: 10.1039/c0sm01143f
extern: '1'
external_id:
  arxiv:
  - '1010.2453'
intvolume: '         7'
issue: '5'
keyword:
- condensed matter physics
- general chemistry
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1010.2453
month: '12'
oa: 1
oa_version: Preprint
page: 1874-1878
publication: Soft Matter
publication_identifier:
  issn:
  - 1744-683X
  - 1744-6848
publication_status: published
publisher: Royal Society of Chemistry (RSC)
quality_controlled: '1'
status: public
title: Particle self-assembly on soft elastic shells
type: journal_article
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 7
year: '2010'
...
---
_id: '13416'
abstract:
- lang: eng
  text: The reversible molecular template-directed self-assembly of gold nanoparticles
    (AuNPs), a process which relies solely on noncovalent bonding interactions, has
    been demonstrated by high-resolution transmission electron microscopy (HR-TEM).
    By employing a well-known host−guest binding motif, the AuNPs have been systemized
    into discrete dimers, trimers, and tetramers. These nanoparticulate twins, triplets,
    and quadruplets, which can be disassembled and reassembled either chemically or
    electrochemically, can be coalesced into larger, permanent polygonal structures
    by thermal treatment using a focused HR-TEM electron beam.
article_processing_charge: No
article_type: original
author:
- first_name: Mark A.
  full_name: Olson, Mark A.
  last_name: Olson
- first_name: Ali
  full_name: Coskun, Ali
  last_name: Coskun
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
- first_name: Lei
  full_name: Fang, Lei
  last_name: Fang
- first_name: Sanjeev K.
  full_name: Dey, Sanjeev K.
  last_name: Dey
- first_name: Kevin P.
  full_name: Browne, Kevin P.
  last_name: Browne
- first_name: Bartosz A.
  full_name: Grzybowski, Bartosz A.
  last_name: Grzybowski
- first_name: J. Fraser
  full_name: Stoddart, J. Fraser
  last_name: Stoddart
citation:
  ama: Olson MA, Coskun A, Klajn R, et al. Assembly of polygonal nanoparticle clusters
    directed by reversible noncovalent bonding interactions. <i>Nano Letters</i>.
    2009;9(9):3185-3190. doi:<a href="https://doi.org/10.1021/nl901385c">10.1021/nl901385c</a>
  apa: Olson, M. A., Coskun, A., Klajn, R., Fang, L., Dey, S. K., Browne, K. P., …
    Stoddart, J. F. (2009). Assembly of polygonal nanoparticle clusters directed by
    reversible noncovalent bonding interactions. <i>Nano Letters</i>. American Chemical
    Society. <a href="https://doi.org/10.1021/nl901385c">https://doi.org/10.1021/nl901385c</a>
  chicago: Olson, Mark A., Ali Coskun, Rafal Klajn, Lei Fang, Sanjeev K. Dey, Kevin
    P. Browne, Bartosz A. Grzybowski, and J. Fraser Stoddart. “Assembly of Polygonal
    Nanoparticle Clusters Directed by Reversible Noncovalent Bonding Interactions.”
    <i>Nano Letters</i>. American Chemical Society, 2009. <a href="https://doi.org/10.1021/nl901385c">https://doi.org/10.1021/nl901385c</a>.
  ieee: M. A. Olson <i>et al.</i>, “Assembly of polygonal nanoparticle clusters directed
    by reversible noncovalent bonding interactions,” <i>Nano Letters</i>, vol. 9,
    no. 9. American Chemical Society, pp. 3185–3190, 2009.
  ista: Olson MA, Coskun A, Klajn R, Fang L, Dey SK, Browne KP, Grzybowski BA, Stoddart
    JF. 2009. Assembly of polygonal nanoparticle clusters directed by reversible noncovalent
    bonding interactions. Nano Letters. 9(9), 3185–3190.
  mla: Olson, Mark A., et al. “Assembly of Polygonal Nanoparticle Clusters Directed
    by Reversible Noncovalent Bonding Interactions.” <i>Nano Letters</i>, vol. 9,
    no. 9, American Chemical Society, 2009, pp. 3185–90, doi:<a href="https://doi.org/10.1021/nl901385c">10.1021/nl901385c</a>.
  short: M.A. Olson, A. Coskun, R. Klajn, L. Fang, S.K. Dey, K.P. Browne, B.A. Grzybowski,
    J.F. Stoddart, Nano Letters 9 (2009) 3185–3190.
date_created: 2023-08-01T10:29:27Z
date_published: 2009-09-09T00:00:00Z
date_updated: 2023-08-08T08:57:34Z
day: '09'
doi: 10.1021/nl901385c
extern: '1'
external_id:
  pmid:
  - '19694461'
intvolume: '         9'
issue: '9'
keyword:
- Mechanical Engineering
- Condensed Matter Physics
- General Materials Science
- General Chemistry
- Bioengineering
language:
- iso: eng
month: '09'
oa_version: None
page: 3185-3190
pmid: 1
publication: Nano Letters
publication_identifier:
  eissn:
  - 1530-6992
  issn:
  - 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Assembly of polygonal nanoparticle clusters directed by reversible noncovalent
  bonding interactions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 9
year: '2009'
...
---
_id: '8482'
abstract:
- lang: eng
  text: The SOFAST-HMQC experiment [P. Schanda, B. Brutscher, Very fast two-dimensional
    NMR spectroscopy for real-time investigation of dynamic events in proteins on
    the time scale of seconds, J. Am. Chem. Soc. 127 (2005) 8014–8015] allows recording
    two-dimensional correlation spectra of macromolecules such as proteins in only
    a few seconds acquisition time. To achieve the highest possible sensitivity, SOFAST-HMQC
    experiments are preferably performed on high-field NMR spectrometers equipped
    with cryogenically cooled probes. The duty cycle of over 80% in fast-pulsing SOFAST-HMQC
    experiments, however, may cause problems when using a cryogenic probe. Here we
    introduce SE-IPAP-SOFAST-HMQC, a new pulse sequence that provides comparable sensitivity
    to standard SOFAST-HMQC, while avoiding heteronuclear decoupling during 1H detection,
    and thus significantly reducing the radiofrequency load of the probe during the
    experiment. The experiment is also attractive for fast and sensitive measurement
    of heteronuclear one-bond spin coupling constants.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Thomas
  full_name: Kern, Thomas
  last_name: Kern
- first_name: Paul
  full_name: Schanda, Paul
  id: 7B541462-FAF6-11E9-A490-E8DFE5697425
  last_name: Schanda
  orcid: 0000-0002-9350-7606
- first_name: Bernhard
  full_name: Brutscher, Bernhard
  last_name: Brutscher
citation:
  ama: Kern T, Schanda P, Brutscher B. Sensitivity-enhanced IPAP-SOFAST-HMQC for fast-pulsing
    2D NMR with reduced radiofrequency load. <i>Journal of Magnetic Resonance</i>.
    2008;190(2):333-338. doi:<a href="https://doi.org/10.1016/j.jmr.2007.11.015">10.1016/j.jmr.2007.11.015</a>
  apa: Kern, T., Schanda, P., &#38; Brutscher, B. (2008). Sensitivity-enhanced IPAP-SOFAST-HMQC
    for fast-pulsing 2D NMR with reduced radiofrequency load. <i>Journal of Magnetic
    Resonance</i>. Elsevier. <a href="https://doi.org/10.1016/j.jmr.2007.11.015">https://doi.org/10.1016/j.jmr.2007.11.015</a>
  chicago: Kern, Thomas, Paul Schanda, and Bernhard Brutscher. “Sensitivity-Enhanced
    IPAP-SOFAST-HMQC for Fast-Pulsing 2D NMR with Reduced Radiofrequency Load.” <i>Journal
    of Magnetic Resonance</i>. Elsevier, 2008. <a href="https://doi.org/10.1016/j.jmr.2007.11.015">https://doi.org/10.1016/j.jmr.2007.11.015</a>.
  ieee: T. Kern, P. Schanda, and B. Brutscher, “Sensitivity-enhanced IPAP-SOFAST-HMQC
    for fast-pulsing 2D NMR with reduced radiofrequency load,” <i>Journal of Magnetic
    Resonance</i>, vol. 190, no. 2. Elsevier, pp. 333–338, 2008.
  ista: Kern T, Schanda P, Brutscher B. 2008. Sensitivity-enhanced IPAP-SOFAST-HMQC
    for fast-pulsing 2D NMR with reduced radiofrequency load. Journal of Magnetic
    Resonance. 190(2), 333–338.
  mla: Kern, Thomas, et al. “Sensitivity-Enhanced IPAP-SOFAST-HMQC for Fast-Pulsing
    2D NMR with Reduced Radiofrequency Load.” <i>Journal of Magnetic Resonance</i>,
    vol. 190, no. 2, Elsevier, 2008, pp. 333–38, doi:<a href="https://doi.org/10.1016/j.jmr.2007.11.015">10.1016/j.jmr.2007.11.015</a>.
  short: T. Kern, P. Schanda, B. Brutscher, Journal of Magnetic Resonance 190 (2008)
    333–338.
date_created: 2020-09-18T10:12:46Z
date_published: 2008-02-01T00:00:00Z
date_updated: 2021-01-12T08:19:35Z
day: '01'
doi: 10.1016/j.jmr.2007.11.015
extern: '1'
intvolume: '       190'
issue: '2'
keyword:
- Nuclear and High Energy Physics
- Biophysics
- Biochemistry
- Condensed Matter Physics
language:
- iso: eng
month: '02'
oa_version: None
page: 333-338
publication: Journal of Magnetic Resonance
publication_identifier:
  issn:
  - 1090-7807
publication_status: published
publisher: Elsevier
quality_controlled: '1'
status: public
title: Sensitivity-enhanced IPAP-SOFAST-HMQC for fast-pulsing 2D NMR with reduced
  radiofrequency load
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 190
year: '2008'
...
---
_id: '13423'
abstract:
- lang: eng
  text: Supraspheres (SS) composed of hundreds to thousands of metal nanoparticles
    (NPs) and crosslinked by dithiol linkers are assembled into larger structures,
    which are subsequently converted into nanoporous metals (NMs). Conversion is achieved
    by heating which removes organic molecules stabilizing the NPs and allows for
    NP fusion. Heating of SS solutions leads to NMs of overall macroscopic dimensions;
    localized radiation using collimated electron beam is used to prepare metallized
    surface micropatterns. Depending on the composition of supraspherical precursors,
    nanoporous materials composed of up to three metals can be obtained. Strategies
    for controlling pore size and nanoscale surface roughness of these materials are
    discussed.
article_processing_charge: No
article_type: original
author:
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
- first_name: Timothy P.
  full_name: Gray, Timothy P.
  last_name: Gray
- first_name: Paul J.
  full_name: Wesson, Paul J.
  last_name: Wesson
- first_name: Benjamin D.
  full_name: Myers, Benjamin D.
  last_name: Myers
- first_name: Vinayak P.
  full_name: Dravid, Vinayak P.
  last_name: Dravid
- first_name: Stoyan K.
  full_name: Smoukov, Stoyan K.
  last_name: Smoukov
- first_name: Bartosz A.
  full_name: Grzybowski, Bartosz A.
  last_name: Grzybowski
citation:
  ama: Klajn R, Gray TP, Wesson PJ, et al. Bulk synthesis and surface patterning of
    nanoporous metals and alloys from supraspherical nanoparticle aggregates. <i>Advanced
    Functional Materials</i>. 2008;18(18):2763-2769. doi:<a href="https://doi.org/10.1002/adfm.200800293">10.1002/adfm.200800293</a>
  apa: Klajn, R., Gray, T. P., Wesson, P. J., Myers, B. D., Dravid, V. P., Smoukov,
    S. K., &#38; Grzybowski, B. A. (2008). Bulk synthesis and surface patterning of
    nanoporous metals and alloys from supraspherical nanoparticle aggregates. <i>Advanced
    Functional Materials</i>. Wiley. <a href="https://doi.org/10.1002/adfm.200800293">https://doi.org/10.1002/adfm.200800293</a>
  chicago: Klajn, Rafal, Timothy P. Gray, Paul J. Wesson, Benjamin D. Myers, Vinayak
    P. Dravid, Stoyan K. Smoukov, and Bartosz A. Grzybowski. “Bulk Synthesis and Surface
    Patterning of Nanoporous Metals and Alloys from Supraspherical Nanoparticle Aggregates.”
    <i>Advanced Functional Materials</i>. Wiley, 2008. <a href="https://doi.org/10.1002/adfm.200800293">https://doi.org/10.1002/adfm.200800293</a>.
  ieee: R. Klajn <i>et al.</i>, “Bulk synthesis and surface patterning of nanoporous
    metals and alloys from supraspherical nanoparticle aggregates,” <i>Advanced Functional
    Materials</i>, vol. 18, no. 18. Wiley, pp. 2763–2769, 2008.
  ista: Klajn R, Gray TP, Wesson PJ, Myers BD, Dravid VP, Smoukov SK, Grzybowski BA.
    2008. Bulk synthesis and surface patterning of nanoporous metals and alloys from
    supraspherical nanoparticle aggregates. Advanced Functional Materials. 18(18),
    2763–2769.
  mla: Klajn, Rafal, et al. “Bulk Synthesis and Surface Patterning of Nanoporous Metals
    and Alloys from Supraspherical Nanoparticle Aggregates.” <i>Advanced Functional
    Materials</i>, vol. 18, no. 18, Wiley, 2008, pp. 2763–69, doi:<a href="https://doi.org/10.1002/adfm.200800293">10.1002/adfm.200800293</a>.
  short: R. Klajn, T.P. Gray, P.J. Wesson, B.D. Myers, V.P. Dravid, S.K. Smoukov,
    B.A. Grzybowski, Advanced Functional Materials 18 (2008) 2763–2769.
date_created: 2023-08-01T10:30:57Z
date_published: 2008-09-23T00:00:00Z
date_updated: 2023-08-08T11:16:28Z
day: '23'
doi: 10.1002/adfm.200800293
extern: '1'
intvolume: '        18'
issue: '18'
keyword:
- Electrochemistry
- Condensed Matter Physics
- Biomaterials
- Electronic
- Optical and Magnetic Materials
language:
- iso: eng
month: '09'
oa_version: None
page: 2763-2769
publication: Advanced Functional Materials
publication_identifier:
  eissn:
  - 1616-3028
  issn:
  - 1616-301X
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: Bulk synthesis and surface patterning of nanoporous metals and alloys from
  supraspherical nanoparticle aggregates
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 18
year: '2008'
...
---
_id: '13426'
abstract:
- lang: eng
  text: Photoswelling of thin films of dichromated gelatin provides a basis for fabrication
    of multilevel surface reliefs via sequential UV illumination through different
    photomasks. The remarkable feature of this simple, benchtop technique is that
    by adjusting irradiation times, film thickness, or its hydration state the heights
    of the developed features can be varied from few nanometers to tens of microns.
    After UV exposure, the surface structures can be replicated faithfully into either
    soft or hard PDMS stamps.
article_processing_charge: No
article_type: original
author:
- first_name: Maciej
  full_name: Paszewski, Maciej
  last_name: Paszewski
- first_name: Stoyan K.
  full_name: Smoukov, Stoyan K.
  last_name: Smoukov
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
- first_name: Bartosz A.
  full_name: Grzybowski, Bartosz A.
  last_name: Grzybowski
citation:
  ama: Paszewski M, Smoukov SK, Klajn R, Grzybowski BA. Multilevel surface nano- and
    microstructuring via sequential photoswelling of dichromated gelatin. <i>Langmuir</i>.
    2007;23(10):5419-5422. doi:<a href="https://doi.org/10.1021/la062982c">10.1021/la062982c</a>
  apa: Paszewski, M., Smoukov, S. K., Klajn, R., &#38; Grzybowski, B. A. (2007). Multilevel
    surface nano- and microstructuring via sequential photoswelling of dichromated
    gelatin. <i>Langmuir</i>. American Chemical Society. <a href="https://doi.org/10.1021/la062982c">https://doi.org/10.1021/la062982c</a>
  chicago: Paszewski, Maciej, Stoyan K. Smoukov, Rafal Klajn, and Bartosz A. Grzybowski.
    “Multilevel Surface Nano- and Microstructuring via Sequential Photoswelling of
    Dichromated Gelatin.” <i>Langmuir</i>. American Chemical Society, 2007. <a href="https://doi.org/10.1021/la062982c">https://doi.org/10.1021/la062982c</a>.
  ieee: M. Paszewski, S. K. Smoukov, R. Klajn, and B. A. Grzybowski, “Multilevel surface
    nano- and microstructuring via sequential photoswelling of dichromated gelatin,”
    <i>Langmuir</i>, vol. 23, no. 10. American Chemical Society, pp. 5419–5422, 2007.
  ista: Paszewski M, Smoukov SK, Klajn R, Grzybowski BA. 2007. Multilevel surface
    nano- and microstructuring via sequential photoswelling of dichromated gelatin.
    Langmuir. 23(10), 5419–5422.
  mla: Paszewski, Maciej, et al. “Multilevel Surface Nano- and Microstructuring via
    Sequential Photoswelling of Dichromated Gelatin.” <i>Langmuir</i>, vol. 23, no.
    10, American Chemical Society, 2007, pp. 5419–22, doi:<a href="https://doi.org/10.1021/la062982c">10.1021/la062982c</a>.
  short: M. Paszewski, S.K. Smoukov, R. Klajn, B.A. Grzybowski, Langmuir 23 (2007)
    5419–5422.
date_created: 2023-08-01T10:31:33Z
date_published: 2007-04-11T00:00:00Z
date_updated: 2023-08-08T11:26:24Z
day: '11'
doi: 10.1021/la062982c
extern: '1'
external_id:
  pmid:
  - '17425340'
intvolume: '        23'
issue: '10'
keyword:
- Electrochemistry
- Spectroscopy
- Surfaces and Interfaces
- Condensed Matter Physics
- General Materials Science
language:
- iso: eng
month: '04'
oa_version: None
page: 5419-5422
pmid: 1
publication: Langmuir
publication_identifier:
  eissn:
  - 1520-5827
  issn:
  - 0743-7463
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Multilevel surface nano- and microstructuring via sequential photoswelling
  of dichromated gelatin
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 23
year: '2007'
...
