[{"article_processing_charge":"No","date_created":"2023-10-08T22:01:18Z","department":[{"_id":"ToHe"}],"publication_status":"published","intvolume":"     14137","alternative_title":["LNBI"],"title":"Phenotype control of partially specified boolean networks","scopus_import":"1","_id":"14411","author":[{"full_name":"Beneš, Nikola","last_name":"Beneš","first_name":"Nikola"},{"full_name":"Brim, Luboš","last_name":"Brim","first_name":"Luboš"},{"id":"07c5ea74-f61c-11ec-a664-aa7c5d957b2b","orcid":"0000-0003-1993-0331","full_name":"Pastva, Samuel","first_name":"Samuel","last_name":"Pastva"},{"full_name":"Šafránek, David","first_name":"David","last_name":"Šafránek"},{"last_name":"Šmijáková","first_name":"Eva","full_name":"Šmijáková, Eva"}],"publisher":"Springer Nature","ec_funded":1,"quality_controlled":"1","page":"18-35","file_date_updated":"2024-02-16T08:26:32Z","day":"09","doi":"10.1007/978-3-031-42697-1_2","abstract":[{"text":"Partially specified Boolean networks (PSBNs) represent a promising framework for the qualitative modelling of biological systems in which the logic of interactions is not completely known. Phenotype control aims to stabilise the network in states exhibiting specific traits.\r\nIn this paper, we define the phenotype control problem in the context of asynchronous PSBNs and propose a novel semi-symbolic algorithm for solving this problem with permanent variable perturbations.","lang":"eng"}],"citation":{"short":"N. Beneš, L. Brim, S. Pastva, D. Šafránek, E. Šmijáková, in:, 21st International Conference on Computational Methods in Systems Biology, Springer Nature, 2023, pp. 18–35.","mla":"Beneš, Nikola, et al. “Phenotype Control of Partially Specified Boolean Networks.” <i>21st International Conference on Computational Methods in Systems Biology</i>, vol. 14137, Springer Nature, 2023, pp. 18–35, doi:<a href=\"https://doi.org/10.1007/978-3-031-42697-1_2\">10.1007/978-3-031-42697-1_2</a>.","ista":"Beneš N, Brim L, Pastva S, Šafránek D, Šmijáková E. 2023. Phenotype control of partially specified boolean networks. 21st International Conference on Computational Methods in Systems Biology. CMSB: Computational Methods in Systems Biology, LNBI, vol. 14137, 18–35.","ama":"Beneš N, Brim L, Pastva S, Šafránek D, Šmijáková E. Phenotype control of partially specified boolean networks. In: <i>21st International Conference on Computational Methods in Systems Biology</i>. Vol 14137. Springer Nature; 2023:18-35. doi:<a href=\"https://doi.org/10.1007/978-3-031-42697-1_2\">10.1007/978-3-031-42697-1_2</a>","apa":"Beneš, N., Brim, L., Pastva, S., Šafránek, D., &#38; Šmijáková, E. (2023). Phenotype control of partially specified boolean networks. In <i>21st International Conference on Computational Methods in Systems Biology</i> (Vol. 14137, pp. 18–35). Luxembourg City, Luxembourg: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-031-42697-1_2\">https://doi.org/10.1007/978-3-031-42697-1_2</a>","ieee":"N. Beneš, L. Brim, S. Pastva, D. Šafránek, and E. Šmijáková, “Phenotype control of partially specified boolean networks,” in <i>21st International Conference on Computational Methods in Systems Biology</i>, Luxembourg City, Luxembourg, 2023, vol. 14137, pp. 18–35.","chicago":"Beneš, Nikola, Luboš Brim, Samuel Pastva, David Šafránek, and Eva Šmijáková. “Phenotype Control of Partially Specified Boolean Networks.” In <i>21st International Conference on Computational Methods in Systems Biology</i>, 14137:18–35. Springer Nature, 2023. <a href=\"https://doi.org/10.1007/978-3-031-42697-1_2\">https://doi.org/10.1007/978-3-031-42697-1_2</a>."},"year":"2023","date_updated":"2024-02-20T09:02:04Z","volume":14137,"acknowledgement":"This work was supported by the Czech Foundation grant No. GA22-10845S, Grant Agency of Masaryk University grant No. MUNI/G/1771/2020, and the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 101034413.","ddc":["000"],"project":[{"call_identifier":"H2020","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","grant_number":"101034413","name":"IST-BRIDGE: International postdoctoral program"}],"oa_version":"Submitted Version","month":"09","has_accepted_license":"1","publication":"21st International Conference on Computational Methods in Systems Biology","conference":{"end_date":"2023-09-15","location":"Luxembourg City, Luxembourg","name":"CMSB: Computational Methods in Systems Biology","start_date":"2023-09-13"},"language":[{"iso":"eng"}],"publication_identifier":{"isbn":["9783031426964"],"eissn":["1611-3349"],"issn":["0302-9743"]},"oa":1,"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"type":"conference","date_published":"2023-09-09T00:00:00Z","file":[{"content_type":"application/pdf","file_name":"cmsb2023.pdf","date_updated":"2024-02-16T08:26:32Z","checksum":"6f71bdaedb770b52380222fd9f4d7937","file_size":691582,"date_created":"2024-02-16T08:26:32Z","creator":"spastva","file_id":"14997","success":1,"access_level":"open_access","relation":"main_file"}],"status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87"}]