---
_id: '507'
abstract:
- lang: eng
  text: Fertilization in flowering plants requires the temporal and spatial coordination
    of many developmental processes, including pollen production, anther dehiscence,
    ovule production, and pollen tube elongation. However, it remains elusive as to
    how this coordination occurs during reproduction. Here, we present evidence that
    endocytosis, involving heterotetrameric adaptor protein complex 2 (AP-2), plays
    a crucial role in fertilization. An Arabidopsis thaliana mutant ap2m displays
    multiple defects in pollen production and viability, as well as elongation of
    staminal filaments and pollen tubes, all of which are pivotal processes needed
    for fertilization. Of these abnormalities, the defects in elongation of staminal
    filaments and pollen tubes were partially rescued by exogenous auxin. Moreover,
    DR5rev:GFP (for green fluorescent protein) expression was greatly reduced in filaments
    and anthers in ap2m mutant plants. At the cellular level, ap2m mutants displayed
    defects in both endocytosis of N-(3-triethylammonium-propyl)-4- (4-diethylaminophenylhexatrienyl)
    pyridinium dibromide, a lypophilic dye used as an endocytosis marker, and polar
    localization of auxin-efflux carrier PIN FORMED2 (PIN2) in the stamen filaments.
    Moreover, these defects were phenocopied by treatment with Tyrphostin A23, an
    inhibitor of endocytosis. Based on these results, we propose that AP-2-dependent
    endocytosis plays a crucial role in coordinating the multiple developmental aspects
    of male reproductive organs by modulating cellular auxin level through the regulation
    of the amount and polarity of PINs.
author:
- first_name: Soo
  full_name: Kim, Soo
  last_name: Kim
- first_name: Zheng
  full_name: Xu, Zheng
  last_name: Xu
- first_name: Kyungyoung
  full_name: Song, Kyungyoung
  last_name: Song
- first_name: Dae
  full_name: Kim, Dae
  last_name: Kim
- first_name: Hyangju
  full_name: Kang, Hyangju
  last_name: Kang
- first_name: Ilka
  full_name: Reichardt, Ilka
  last_name: Reichardt
- first_name: Eun
  full_name: Sohn, Eun
  last_name: Sohn
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Gerd
  full_name: Juergens, Gerd
  last_name: Juergens
- first_name: Inhwan
  full_name: Hwang, Inhwan
  last_name: Hwang
citation:
  ama: Kim S, Xu Z, Song K, et al. Adaptor protein complex 2-mediated endocytosis
    is crucial for male reproductive organ development in arabidopsis. <i>Plant Cell</i>.
    2013;25(8):2970-2985. doi:<a href="https://doi.org/10.1105/tpc.113.114264">10.1105/tpc.113.114264</a>
  apa: Kim, S., Xu, Z., Song, K., Kim, D., Kang, H., Reichardt, I., … Hwang, I. (2013).
    Adaptor protein complex 2-mediated endocytosis is crucial for male reproductive
    organ development in arabidopsis. <i>Plant Cell</i>. American Society of Plant
    Biologists. <a href="https://doi.org/10.1105/tpc.113.114264">https://doi.org/10.1105/tpc.113.114264</a>
  chicago: Kim, Soo, Zheng Xu, Kyungyoung Song, Dae Kim, Hyangju Kang, Ilka Reichardt,
    Eun Sohn, Jiří Friml, Gerd Juergens, and Inhwan Hwang. “Adaptor Protein Complex
    2-Mediated Endocytosis Is Crucial for Male Reproductive Organ Development in Arabidopsis.”
    <i>Plant Cell</i>. American Society of Plant Biologists, 2013. <a href="https://doi.org/10.1105/tpc.113.114264">https://doi.org/10.1105/tpc.113.114264</a>.
  ieee: S. Kim <i>et al.</i>, “Adaptor protein complex 2-mediated endocytosis is crucial
    for male reproductive organ development in arabidopsis,” <i>Plant Cell</i>, vol.
    25, no. 8. American Society of Plant Biologists, pp. 2970–2985, 2013.
  ista: Kim S, Xu Z, Song K, Kim D, Kang H, Reichardt I, Sohn E, Friml J, Juergens
    G, Hwang I. 2013. Adaptor protein complex 2-mediated endocytosis is crucial for
    male reproductive organ development in arabidopsis. Plant Cell. 25(8), 2970–2985.
  mla: Kim, Soo, et al. “Adaptor Protein Complex 2-Mediated Endocytosis Is Crucial
    for Male Reproductive Organ Development in Arabidopsis.” <i>Plant Cell</i>, vol.
    25, no. 8, American Society of Plant Biologists, 2013, pp. 2970–85, doi:<a href="https://doi.org/10.1105/tpc.113.114264">10.1105/tpc.113.114264</a>.
  short: S. Kim, Z. Xu, K. Song, D. Kim, H. Kang, I. Reichardt, E. Sohn, J. Friml,
    G. Juergens, I. Hwang, Plant Cell 25 (2013) 2970–2985.
date_created: 2018-12-11T11:46:52Z
date_published: 2013-08-01T00:00:00Z
date_updated: 2021-01-12T08:01:12Z
day: '01'
department:
- _id: JiFr
doi: 10.1105/tpc.113.114264
external_id:
  pmid:
  - '23975898'
intvolume: '        25'
issue: '8'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3784592/
month: '08'
oa: 1
oa_version: Submitted Version
page: 2970 - 2985
pmid: 1
publication: Plant Cell
publication_status: published
publisher: American Society of Plant Biologists
publist_id: '7312'
quality_controlled: '1'
scopus_import: 1
status: public
title: Adaptor protein complex 2-mediated endocytosis is crucial for male reproductive
  organ development in arabidopsis
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 25
year: '2013'
...
---
_id: '508'
abstract:
- lang: eng
  text: The phagocyte NADPH oxidase catalyzes the reduction of O2 to reactive oxygen
    species with microbicidal activity. It is composed of two membrane-spanning subunits,
    gp91-phox and p22-phox (encoded by CYBB and CYBA, respectively), and three cytoplasmic
    subunits, p40-phox, p47-phox, and p67-phox (encoded by NCF4, NCF1, and NCF2, respectively).
    Mutations in any of these genes can result in chronic granulomatous disease, a
    primary immunodeficiency characterized by recurrent infections. Using evolutionary
    mapping, we determined that episodes of adaptive natural selection have shaped
    the extracellular portion of gp91-phox during the evolution of mammals, which
    suggests that this region may have a function in host-pathogen interactions. On
    the basis of a resequencing analysis of approximately 35 kb of CYBB, CYBA, NCF2,
    and NCF4 in 102 ethnically diverse individuals (24 of African ancestry, 31 of
    European ancestry, 24 of Asian/Oceanians, and 23 US Hispanics), we show that the
    pattern of CYBA diversity is compatible with balancing natural selection, perhaps
    mediated by catalase-positive pathogens. NCF2 in Asian populations shows a pattern
    of diversity characterized by a differentiated haplotype structure. Our study
    provides insight into the role of pathogen-driven natural selection in an innate
    immune pathway and sheds light on the role of CYBA in endothelial, nonphagocytic
    NADPH oxidases, which are relevant in the pathogenesis of cardiovascular and other
    complex diseases.
author:
- first_name: Eduardo
  full_name: Tarazona Santos, Eduardo
  last_name: Tarazona Santos
- first_name: Moara
  full_name: Machado, Moara
  last_name: Machado
- first_name: Wagner
  full_name: Magalhães, Wagner
  last_name: Magalhães
- first_name: Renee
  full_name: Chen, Renee
  last_name: Chen
- first_name: Fernanda
  full_name: Lyon, Fernanda
  last_name: Lyon
- first_name: Laurie
  full_name: Burdett, Laurie
  last_name: Burdett
- first_name: Andrew
  full_name: Crenshaw, Andrew
  last_name: Crenshaw
- first_name: Cristina
  full_name: Fabbri, Cristina
  last_name: Fabbri
- first_name: Latife
  full_name: Pereira, Latife
  last_name: Pereira
- first_name: Laelia
  full_name: Pinto, Laelia
  last_name: Pinto
- first_name: Rodrigo A
  full_name: Fernandes Redondo, Rodrigo A
  id: 409D5C96-F248-11E8-B48F-1D18A9856A87
  last_name: Fernandes Redondo
  orcid: 0000-0002-5837-2793
- first_name: Ben
  full_name: Sestanovich, Ben
  last_name: Sestanovich
- first_name: Meredith
  full_name: Yeager, Meredith
  last_name: Yeager
- first_name: Stephen
  full_name: Chanock, Stephen
  last_name: Chanock
citation:
  ama: 'Tarazona Santos E, Machado M, Magalhães W, et al. Evolutionary dynamics of
    the human NADPH oxidase genes CYBB, CYBA, NCF2, and NCF4: Functional implications.
    <i>Molecular Biology and Evolution</i>. 2013;30(9):2157-2167. doi:<a href="https://doi.org/10.1093/molbev/mst119">10.1093/molbev/mst119</a>'
  apa: 'Tarazona Santos, E., Machado, M., Magalhães, W., Chen, R., Lyon, F., Burdett,
    L., … Chanock, S. (2013). Evolutionary dynamics of the human NADPH oxidase genes
    CYBB, CYBA, NCF2, and NCF4: Functional implications. <i>Molecular Biology and
    Evolution</i>. Oxford University Press. <a href="https://doi.org/10.1093/molbev/mst119">https://doi.org/10.1093/molbev/mst119</a>'
  chicago: 'Tarazona Santos, Eduardo, Moara Machado, Wagner Magalhães, Renee Chen,
    Fernanda Lyon, Laurie Burdett, Andrew Crenshaw, et al. “Evolutionary Dynamics
    of the Human NADPH Oxidase Genes CYBB, CYBA, NCF2, and NCF4: Functional Implications.”
    <i>Molecular Biology and Evolution</i>. Oxford University Press, 2013. <a href="https://doi.org/10.1093/molbev/mst119">https://doi.org/10.1093/molbev/mst119</a>.'
  ieee: 'E. Tarazona Santos <i>et al.</i>, “Evolutionary dynamics of the human NADPH
    oxidase genes CYBB, CYBA, NCF2, and NCF4: Functional implications,” <i>Molecular
    Biology and Evolution</i>, vol. 30, no. 9. Oxford University Press, pp. 2157–2167,
    2013.'
  ista: 'Tarazona Santos E, Machado M, Magalhães W, Chen R, Lyon F, Burdett L, Crenshaw
    A, Fabbri C, Pereira L, Pinto L, Fernandes Redondo RA, Sestanovich B, Yeager M,
    Chanock S. 2013. Evolutionary dynamics of the human NADPH oxidase genes CYBB,
    CYBA, NCF2, and NCF4: Functional implications. Molecular Biology and Evolution.
    30(9), 2157–2167.'
  mla: 'Tarazona Santos, Eduardo, et al. “Evolutionary Dynamics of the Human NADPH
    Oxidase Genes CYBB, CYBA, NCF2, and NCF4: Functional Implications.” <i>Molecular
    Biology and Evolution</i>, vol. 30, no. 9, Oxford University Press, 2013, pp.
    2157–67, doi:<a href="https://doi.org/10.1093/molbev/mst119">10.1093/molbev/mst119</a>.'
  short: E. Tarazona Santos, M. Machado, W. Magalhães, R. Chen, F. Lyon, L. Burdett,
    A. Crenshaw, C. Fabbri, L. Pereira, L. Pinto, R.A. Fernandes Redondo, B. Sestanovich,
    M. Yeager, S. Chanock, Molecular Biology and Evolution 30 (2013) 2157–2167.
date_created: 2018-12-11T11:46:52Z
date_published: 2013-09-01T00:00:00Z
date_updated: 2021-01-12T08:01:12Z
day: '01'
department:
- _id: JoBo
doi: 10.1093/molbev/mst119
external_id:
  pmid:
  - '23821607'
intvolume: '        30'
issue: '9'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3748357/
month: '09'
oa: 1
oa_version: Submitted Version
page: 2157 - 2167
pmid: 1
publication: Molecular Biology and Evolution
publication_status: published
publisher: Oxford University Press
publist_id: '7310'
quality_controlled: '1'
scopus_import: 1
status: public
title: 'Evolutionary dynamics of the human NADPH oxidase genes CYBB, CYBA, NCF2, and
  NCF4: Functional implications'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 30
year: '2013'
...
---
_id: '509'
abstract:
- lang: eng
  text: 'Clathrin-mediated endocytosis (CME) regulates many aspects of plant development,
    including hormone signaling and responses to environmental stresses. Despite the
    importance of this process, the machinery that regulates CME in plants is largely
    unknown. In mammals, the heterotetrameric ADAPTOR PROTEIN COMPLEX-2 (AP-2) is
    required for the formation of clathrin-coated vesicles at the plasma membrane
    (PM). Although the existence of AP-2 has been predicted in Arabidopsis thaliana,
    the biochemistry and functionality of the complex is still uncharacterized. Here,
    we identified all the subunits of the Arabidopsis AP-2 by tandem affinity purification
    and found that one of the large AP-2 subunits, AP2A1, localized at the PM and
    interacted with clathrin. Furthermore, endocytosis of the leucine-rich repeat
    receptor kinase, BRASSINOSTEROID INSENSITIVE1 (BRI1), was shown to depend on AP-2.
    Knockdown of the two Arabidopsis AP2A genes or overexpression of a dominant-negative
    version of the medium AP-2 subunit, AP2M, impaired BRI1 endocytosis and enhanced
    the brassinosteroid signaling. Our data reveal that the CME machinery in Arabidopsis
    is evolutionarily conserved and that AP-2 functions in receptormediated endocytosis. '
author:
- first_name: Simone
  full_name: Di Rubbo, Simone
  last_name: Di Rubbo
- first_name: Niloufer
  full_name: Irani, Niloufer
  last_name: Irani
- first_name: Soo
  full_name: Kim, Soo
  last_name: Kim
- first_name: Zheng
  full_name: Xu, Zheng
  last_name: Xu
- first_name: Astrid
  full_name: Gadeyne, Astrid
  last_name: Gadeyne
- first_name: Wim
  full_name: Dejonghe, Wim
  last_name: Dejonghe
- first_name: Isabelle
  full_name: Vanhoutte, Isabelle
  last_name: Vanhoutte
- first_name: Geert
  full_name: Persiau, Geert
  last_name: Persiau
- first_name: Dominique
  full_name: Eeckhout, Dominique
  last_name: Eeckhout
- first_name: Sibu
  full_name: Simon, Sibu
  id: 4542EF9A-F248-11E8-B48F-1D18A9856A87
  last_name: Simon
  orcid: 0000-0002-1998-6741
- first_name: Kyungyoung
  full_name: Song, Kyungyoung
  last_name: Song
- first_name: Jürgen
  full_name: Kleine Vehn, Jürgen
  last_name: Kleine Vehn
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Geert
  full_name: De Jaeger, Geert
  last_name: De Jaeger
- first_name: Daniël
  full_name: Van Damme, Daniël
  last_name: Van Damme
- first_name: Inhwan
  full_name: Hwang, Inhwan
  last_name: Hwang
- first_name: Eugenia
  full_name: Russinova, Eugenia
  last_name: Russinova
citation:
  ama: Di Rubbo S, Irani N, Kim S, et al. The clathrin adaptor complex AP-2 mediates
    endocytosis of brassinosteroid INSENSITIVE1 in arabidopsis. <i>Plant Cell</i>.
    2013;25(8):2986-2997. doi:<a href="https://doi.org/10.1105/tpc.113.114058">10.1105/tpc.113.114058</a>
  apa: Di Rubbo, S., Irani, N., Kim, S., Xu, Z., Gadeyne, A., Dejonghe, W., … Russinova,
    E. (2013). The clathrin adaptor complex AP-2 mediates endocytosis of brassinosteroid
    INSENSITIVE1 in arabidopsis. <i>Plant Cell</i>. American Society of Plant Biologists.
    <a href="https://doi.org/10.1105/tpc.113.114058">https://doi.org/10.1105/tpc.113.114058</a>
  chicago: Di Rubbo, Simone, Niloufer Irani, Soo Kim, Zheng Xu, Astrid Gadeyne, Wim
    Dejonghe, Isabelle Vanhoutte, et al. “The Clathrin Adaptor Complex AP-2 Mediates
    Endocytosis of Brassinosteroid INSENSITIVE1 in Arabidopsis.” <i>Plant Cell</i>.
    American Society of Plant Biologists, 2013. <a href="https://doi.org/10.1105/tpc.113.114058">https://doi.org/10.1105/tpc.113.114058</a>.
  ieee: S. Di Rubbo <i>et al.</i>, “The clathrin adaptor complex AP-2 mediates endocytosis
    of brassinosteroid INSENSITIVE1 in arabidopsis,” <i>Plant Cell</i>, vol. 25, no.
    8. American Society of Plant Biologists, pp. 2986–2997, 2013.
  ista: Di Rubbo S, Irani N, Kim S, Xu Z, Gadeyne A, Dejonghe W, Vanhoutte I, Persiau
    G, Eeckhout D, Simon S, Song K, Kleine Vehn J, Friml J, De Jaeger G, Van Damme
    D, Hwang I, Russinova E. 2013. The clathrin adaptor complex AP-2 mediates endocytosis
    of brassinosteroid INSENSITIVE1 in arabidopsis. Plant Cell. 25(8), 2986–2997.
  mla: Di Rubbo, Simone, et al. “The Clathrin Adaptor Complex AP-2 Mediates Endocytosis
    of Brassinosteroid INSENSITIVE1 in Arabidopsis.” <i>Plant Cell</i>, vol. 25, no.
    8, American Society of Plant Biologists, 2013, pp. 2986–97, doi:<a href="https://doi.org/10.1105/tpc.113.114058">10.1105/tpc.113.114058</a>.
  short: S. Di Rubbo, N. Irani, S. Kim, Z. Xu, A. Gadeyne, W. Dejonghe, I. Vanhoutte,
    G. Persiau, D. Eeckhout, S. Simon, K. Song, J. Kleine Vehn, J. Friml, G. De Jaeger,
    D. Van Damme, I. Hwang, E. Russinova, Plant Cell 25 (2013) 2986–2997.
date_created: 2018-12-11T11:46:52Z
date_published: 2013-08-01T00:00:00Z
date_updated: 2021-01-12T08:01:13Z
day: '01'
department:
- _id: JiFr
doi: 10.1105/tpc.113.114058
external_id:
  pmid:
  - '23975899'
intvolume: '        25'
issue: '8'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3784593/
month: '08'
oa: 1
oa_version: Submitted Version
page: 2986 - 2997
pmid: 1
publication: Plant Cell
publication_status: published
publisher: American Society of Plant Biologists
publist_id: '7311'
quality_controlled: '1'
scopus_import: 1
status: public
title: The clathrin adaptor complex AP-2 mediates endocytosis of brassinosteroid INSENSITIVE1
  in arabidopsis
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 25
year: '2013'
...
---
_id: '511'
abstract:
- lang: eng
  text: The native auxin, indole-3-acetic acid (IAA), is a major regulator of plant
    growth and development. Its nonuniform distribution between cells and tissues
    underlies the spatiotemporal coordination of many developmental events and responses
    to environmental stimuli. The regulation of auxin gradients and the formation
    of auxin maxima/minima most likely involve the regulation of both metabolic and
    transport processes. In this article, we have demonstrated that 2-oxindole-3-acetic
    acid (oxIAA) is a major primary IAA catabolite formed in Arabidopsis thaliana
    root tissues. OxIAA had little biological activity and was formed rapidly and
    irreversibly in response to increases in auxin levels. We further showed that
    there is cell type-specific regulation of oxIAA levels in the Arabidopsis root
    apex. We propose that oxIAA is an important element in the regulation of output
    from auxin gradients and, therefore, in the regulation of auxin homeostasis and
    response mechanisms.
author:
- first_name: Aleš
  full_name: Pěnčík, Aleš
  last_name: Pěnčík
- first_name: Biljana
  full_name: Simonovik, Biljana
  last_name: Simonovik
- first_name: Sara
  full_name: Petersson, Sara
  last_name: Petersson
- first_name: Eva
  full_name: Henyková, Eva
  last_name: Henyková
- first_name: Sibu
  full_name: Simon, Sibu
  id: 4542EF9A-F248-11E8-B48F-1D18A9856A87
  last_name: Simon
  orcid: 0000-0002-1998-6741
- first_name: Kathleen
  full_name: Greenham, Kathleen
  last_name: Greenham
- first_name: Yi
  full_name: Zhang, Yi
  last_name: Zhang
- first_name: Mariusz
  full_name: Kowalczyk, Mariusz
  last_name: Kowalczyk
- first_name: Mark
  full_name: Estelle, Mark
  last_name: Estelle
- first_name: Eva
  full_name: Zažímalová, Eva
  last_name: Zažímalová
- first_name: Ondřej
  full_name: Novák, Ondřej
  last_name: Novák
- first_name: Göran
  full_name: Sandberg, Göran
  last_name: Sandberg
- first_name: Karin
  full_name: Ljung, Karin
  last_name: Ljung
citation:
  ama: Pěnčík A, Simonovik B, Petersson S, et al. Regulation of auxin homeostasis
    and gradients in Arabidopsis roots through the formation of the indole-3-acetic
    acid catabolite 2-oxindole-3-acetic acid. <i>Plant Cell</i>. 2013;25(10):3858-3870.
    doi:<a href="https://doi.org/10.1105/tpc.113.114421">10.1105/tpc.113.114421</a>
  apa: Pěnčík, A., Simonovik, B., Petersson, S., Henyková, E., Simon, S., Greenham,
    K., … Ljung, K. (2013). Regulation of auxin homeostasis and gradients in Arabidopsis
    roots through the formation of the indole-3-acetic acid catabolite 2-oxindole-3-acetic
    acid. <i>Plant Cell</i>. American Society of Plant Biologists. <a href="https://doi.org/10.1105/tpc.113.114421">https://doi.org/10.1105/tpc.113.114421</a>
  chicago: Pěnčík, Aleš, Biljana Simonovik, Sara Petersson, Eva Henyková, Sibu Simon,
    Kathleen Greenham, Yi Zhang, et al. “Regulation of Auxin Homeostasis and Gradients
    in Arabidopsis Roots through the Formation of the Indole-3-Acetic Acid Catabolite
    2-Oxindole-3-Acetic Acid.” <i>Plant Cell</i>. American Society of Plant Biologists,
    2013. <a href="https://doi.org/10.1105/tpc.113.114421">https://doi.org/10.1105/tpc.113.114421</a>.
  ieee: A. Pěnčík <i>et al.</i>, “Regulation of auxin homeostasis and gradients in
    Arabidopsis roots through the formation of the indole-3-acetic acid catabolite
    2-oxindole-3-acetic acid,” <i>Plant Cell</i>, vol. 25, no. 10. American Society
    of Plant Biologists, pp. 3858–3870, 2013.
  ista: Pěnčík A, Simonovik B, Petersson S, Henyková E, Simon S, Greenham K, Zhang
    Y, Kowalczyk M, Estelle M, Zažímalová E, Novák O, Sandberg G, Ljung K. 2013. Regulation
    of auxin homeostasis and gradients in Arabidopsis roots through the formation
    of the indole-3-acetic acid catabolite 2-oxindole-3-acetic acid. Plant Cell. 25(10),
    3858–3870.
  mla: Pěnčík, Aleš, et al. “Regulation of Auxin Homeostasis and Gradients in Arabidopsis
    Roots through the Formation of the Indole-3-Acetic Acid Catabolite 2-Oxindole-3-Acetic
    Acid.” <i>Plant Cell</i>, vol. 25, no. 10, American Society of Plant Biologists,
    2013, pp. 3858–70, doi:<a href="https://doi.org/10.1105/tpc.113.114421">10.1105/tpc.113.114421</a>.
  short: A. Pěnčík, B. Simonovik, S. Petersson, E. Henyková, S. Simon, K. Greenham,
    Y. Zhang, M. Kowalczyk, M. Estelle, E. Zažímalová, O. Novák, G. Sandberg, K. Ljung,
    Plant Cell 25 (2013) 3858–3870.
date_created: 2018-12-11T11:46:53Z
date_published: 2013-10-01T00:00:00Z
date_updated: 2021-01-12T08:01:15Z
day: '01'
department:
- _id: JiFr
doi: 10.1105/tpc.113.114421
external_id:
  pmid:
  - '24163311'
intvolume: '        25'
issue: '10'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: www.doi.org/10.1105/tpc.113.114421
month: '10'
oa: 1
oa_version: Published Version
page: 3858 - 3870
pmid: 1
publication: Plant Cell
publication_status: published
publisher: American Society of Plant Biologists
publist_id: '7309'
quality_controlled: '1'
scopus_import: 1
status: public
title: Regulation of auxin homeostasis and gradients in Arabidopsis roots through
  the formation of the indole-3-acetic acid catabolite 2-oxindole-3-acetic acid
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 25
year: '2013'
...
---
_id: '516'
abstract:
- lang: eng
  text: In plants, changes in local auxin concentrations can trigger a range of developmental
    processes as distinct tissues respond differently to the same auxin stimulus.
    However, little is known about how auxin is interpreted by individual cell types.
    We performed a transcriptomic analysis of responses to auxin within four distinct
    tissues of the Arabidopsis thaliana root and demonstrate that different cell types
    show competence for discrete responses. The majority of auxin‐responsive genes
    displayed a spatial bias in their induction or repression. The novel data set
    was used to examine how auxin influences tissue‐specific transcriptional regulation
    of cell‐identity markers. Additionally, the data were used in combination with
    spatial expression maps of the root to plot a transcriptomic auxin‐response gradient
    across the apical and basal meristem. The readout revealed a strong correlation
    for thousands of genes between the relative response to auxin and expression along
    the longitudinal axis of the root. This data set and comparative analysis provide
    a transcriptome‐level spatial breakdown of the response to auxin within an organ
    where this hormone mediates many aspects of development.
article_number: '688'
article_processing_charge: No
author:
- first_name: Bastiaan
  full_name: Bargmann, Bastiaan
  last_name: Bargmann
- first_name: Steffen
  full_name: Vanneste, Steffen
  last_name: Vanneste
- first_name: Gabriel
  full_name: Krouk, Gabriel
  last_name: Krouk
- first_name: Tal
  full_name: Nawy, Tal
  last_name: Nawy
- first_name: Idan
  full_name: Efroni, Idan
  last_name: Efroni
- first_name: Eilon
  full_name: Shani, Eilon
  last_name: Shani
- first_name: Goh
  full_name: Choe, Goh
  last_name: Choe
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Dominique
  full_name: Bergmann, Dominique
  last_name: Bergmann
- first_name: Mark
  full_name: Estelle, Mark
  last_name: Estelle
- first_name: Kenneth
  full_name: Birnbaum, Kenneth
  last_name: Birnbaum
citation:
  ama: Bargmann B, Vanneste S, Krouk G, et al. A map of cell type‐specific auxin responses.
    <i>Molecular Systems Biology</i>. 2013;9(1). doi:<a href="https://doi.org/10.1038/msb.2013.40">10.1038/msb.2013.40</a>
  apa: Bargmann, B., Vanneste, S., Krouk, G., Nawy, T., Efroni, I., Shani, E., … Birnbaum,
    K. (2013). A map of cell type‐specific auxin responses. <i>Molecular Systems Biology</i>.
    Nature Publishing Group. <a href="https://doi.org/10.1038/msb.2013.40">https://doi.org/10.1038/msb.2013.40</a>
  chicago: Bargmann, Bastiaan, Steffen Vanneste, Gabriel Krouk, Tal Nawy, Idan Efroni,
    Eilon Shani, Goh Choe, et al. “A Map of Cell Type‐specific Auxin Responses.” <i>Molecular
    Systems Biology</i>. Nature Publishing Group, 2013. <a href="https://doi.org/10.1038/msb.2013.40">https://doi.org/10.1038/msb.2013.40</a>.
  ieee: B. Bargmann <i>et al.</i>, “A map of cell type‐specific auxin responses,”
    <i>Molecular Systems Biology</i>, vol. 9, no. 1. Nature Publishing Group, 2013.
  ista: Bargmann B, Vanneste S, Krouk G, Nawy T, Efroni I, Shani E, Choe G, Friml
    J, Bergmann D, Estelle M, Birnbaum K. 2013. A map of cell type‐specific auxin
    responses. Molecular Systems Biology. 9(1), 688.
  mla: Bargmann, Bastiaan, et al. “A Map of Cell Type‐specific Auxin Responses.” <i>Molecular
    Systems Biology</i>, vol. 9, no. 1, 688, Nature Publishing Group, 2013, doi:<a
    href="https://doi.org/10.1038/msb.2013.40">10.1038/msb.2013.40</a>.
  short: B. Bargmann, S. Vanneste, G. Krouk, T. Nawy, I. Efroni, E. Shani, G. Choe,
    J. Friml, D. Bergmann, M. Estelle, K. Birnbaum, Molecular Systems Biology 9 (2013).
date_created: 2018-12-11T11:46:55Z
date_published: 2013-09-10T00:00:00Z
date_updated: 2021-01-12T08:01:17Z
day: '10'
ddc:
- '581'
department:
- _id: JiFr
doi: 10.1038/msb.2013.40
file:
- access_level: open_access
  checksum: 9c4fbe793af4bb22b3fe50cc677a39bf
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:07:46Z
  date_updated: 2020-07-14T12:46:36Z
  file_id: '4644'
  file_name: IST-2018-936-v1+1_2008_Barton_A_map.pdf
  file_size: 3257692
  relation: main_file
file_date_updated: 2020-07-14T12:46:36Z
has_accepted_license: '1'
intvolume: '         9'
issue: '1'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc-sa/4.0/
month: '09'
oa: 1
oa_version: Published Version
publication: Molecular Systems Biology
publication_status: published
publisher: Nature Publishing Group
publist_id: '7303'
pubrep_id: '936'
quality_controlled: '1'
scopus_import: 1
status: public
title: A map of cell type‐specific auxin responses
tmp:
  image: /images/cc_by_nc_sa.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC
    BY-NC-SA 4.0)
  short: CC BY-NC-SA (4.0)
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 9
year: '2013'
...
---
_id: '522'
abstract:
- lang: eng
  text: Podoplanin, a mucin-like plasma membrane protein, is expressed by lymphatic
    endothelial cells and responsible for separation of blood and lymphatic circulation
    through activation of platelets. Here we show that podoplanin is also expressed
    by thymic fibroblastic reticular cells (tFRC), a novel thymic medulla stroma cell
    type associated with thymic conduits, and involved in development of natural regulatory
    T cells (nTreg). Young mice deficient in podoplanin lack nTreg owing to retardation
    of CD4+CD25+ thymocytes in the cortex and missing differentiation of Foxp3+ thymocytes
    in the medulla. This might be due to CCL21 that delocalizes upon deletion of the
    CCL21-binding podoplanin from medullar tFRC to cortex areas. The animals do not
    remain devoid of nTreg but generate them delayed within the first month resulting
    in Th2-biased hypergammaglobulinemia but not in the death-causing autoimmune phenotype
    of Foxp3-deficient Scurfy mice.
author:
- first_name: Elke
  full_name: Fuertbauer, Elke
  last_name: Fuertbauer
- first_name: Jan
  full_name: Zaujec, Jan
  last_name: Zaujec
- first_name: Pavel
  full_name: Uhrin, Pavel
  last_name: Uhrin
- first_name: Ingrid
  full_name: Raab, Ingrid
  last_name: Raab
- first_name: Michele
  full_name: Weber, Michele
  id: 3A3FC708-F248-11E8-B48F-1D18A9856A87
  last_name: Weber
- first_name: Helga
  full_name: Schachner, Helga
  last_name: Schachner
- first_name: Miroslav
  full_name: Bauer, Miroslav
  last_name: Bauer
- first_name: Gerhard
  full_name: Schütz, Gerhard
  last_name: Schütz
- first_name: Bernd
  full_name: Binder, Bernd
  last_name: Binder
- first_name: Michael K
  full_name: Sixt, Michael K
  id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87
  last_name: Sixt
  orcid: 0000-0002-6620-9179
- first_name: Dontscho
  full_name: Kerjaschki, Dontscho
  last_name: Kerjaschki
- first_name: Hannes
  full_name: Stockinger, Hannes
  last_name: Stockinger
citation:
  ama: Fuertbauer E, Zaujec J, Uhrin P, et al. Thymic medullar conduits-associated
    podoplanin promotes natural regulatory T cells. <i>Immunology Letters</i>. 2013;154(1-2):31-41.
    doi:<a href="https://doi.org/10.1016/j.imlet.2013.07.007">10.1016/j.imlet.2013.07.007</a>
  apa: Fuertbauer, E., Zaujec, J., Uhrin, P., Raab, I., Weber, M., Schachner, H.,
    … Stockinger, H. (2013). Thymic medullar conduits-associated podoplanin promotes
    natural regulatory T cells. <i>Immunology Letters</i>. Elsevier. <a href="https://doi.org/10.1016/j.imlet.2013.07.007">https://doi.org/10.1016/j.imlet.2013.07.007</a>
  chicago: Fuertbauer, Elke, Jan Zaujec, Pavel Uhrin, Ingrid Raab, Michele Weber,
    Helga Schachner, Miroslav Bauer, et al. “Thymic Medullar Conduits-Associated Podoplanin
    Promotes Natural Regulatory T Cells.” <i>Immunology Letters</i>. Elsevier, 2013.
    <a href="https://doi.org/10.1016/j.imlet.2013.07.007">https://doi.org/10.1016/j.imlet.2013.07.007</a>.
  ieee: E. Fuertbauer <i>et al.</i>, “Thymic medullar conduits-associated podoplanin
    promotes natural regulatory T cells,” <i>Immunology Letters</i>, vol. 154, no.
    1–2. Elsevier, pp. 31–41, 2013.
  ista: Fuertbauer E, Zaujec J, Uhrin P, Raab I, Weber M, Schachner H, Bauer M, Schütz
    G, Binder B, Sixt MK, Kerjaschki D, Stockinger H. 2013. Thymic medullar conduits-associated
    podoplanin promotes natural regulatory T cells. Immunology Letters. 154(1–2),
    31–41.
  mla: Fuertbauer, Elke, et al. “Thymic Medullar Conduits-Associated Podoplanin Promotes
    Natural Regulatory T Cells.” <i>Immunology Letters</i>, vol. 154, no. 1–2, Elsevier,
    2013, pp. 31–41, doi:<a href="https://doi.org/10.1016/j.imlet.2013.07.007">10.1016/j.imlet.2013.07.007</a>.
  short: E. Fuertbauer, J. Zaujec, P. Uhrin, I. Raab, M. Weber, H. Schachner, M. Bauer,
    G. Schütz, B. Binder, M.K. Sixt, D. Kerjaschki, H. Stockinger, Immunology Letters
    154 (2013) 31–41.
date_created: 2018-12-11T11:46:57Z
date_published: 2013-07-01T00:00:00Z
date_updated: 2021-01-12T08:01:22Z
day: '01'
department:
- _id: MiSi
doi: 10.1016/j.imlet.2013.07.007
intvolume: '       154'
issue: 1-2
language:
- iso: eng
month: '07'
oa_version: None
page: 31 - 41
publication: Immunology Letters
publication_status: published
publisher: Elsevier
publist_id: '7300'
quality_controlled: '1'
scopus_import: 1
status: public
title: Thymic medullar conduits-associated podoplanin promotes natural regulatory
  T cells
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 154
year: '2013'
...
---
_id: '527'
abstract:
- lang: eng
  text: The apical-basal axis of the early plant embryo determines the body plan of
    the adult organism. To establish a polarized embryonic axis, plants evolved a
    unique mechanism that involves directional, cell-to-cell transport of the growth
    regulator auxin. Auxin transport relies on PIN auxin transporters [1], whose polar
    subcellular localization determines the flow directionality. PIN-mediated auxin
    transport mediates the spatial and temporal activity of the auxin response machinery
    [2-7] that contributes to embryo patterning processes, including establishment
    of the apical (shoot) and basal (root) embryo poles [8]. However, little is known
    of upstream mechanisms guiding the (re)polarization of auxin fluxes during embryogenesis
    [9]. Here, we developed a model of plant embryogenesis that correctly generates
    emergent cell polarities and auxin-mediated sequential initiation of apical-basal
    axis of plant embryo. The model relies on two precisely localized auxin sources
    and a feedback between auxin and the polar, subcellular PIN transporter localization.
    Simulations reproduced PIN polarity and auxin distribution, as well as previously
    unknown polarization events during early embryogenesis. The spectrum of validated
    model predictions suggests that our model corresponds to a minimal mechanistic
    framework for initiation and orientation of the apical-basal axis to guide both
    embryonic and postembryonic plant development.
author:
- first_name: Krzysztof T
  full_name: Wabnik, Krzysztof T
  id: 4DE369A4-F248-11E8-B48F-1D18A9856A87
  last_name: Wabnik
  orcid: 0000-0001-7263-0560
- first_name: Hélène
  full_name: Robert, Hélène
  last_name: Robert
- first_name: Richard
  full_name: Smith, Richard
  last_name: Smith
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: Wabnik KT, Robert H, Smith R, Friml J. Modeling framework for the establishment
    of the apical-basal embryonic axis in plants. <i>Current Biology</i>. 2013;23(24):2513-2518.
    doi:<a href="https://doi.org/10.1016/j.cub.2013.10.038">10.1016/j.cub.2013.10.038</a>
  apa: Wabnik, K. T., Robert, H., Smith, R., &#38; Friml, J. (2013). Modeling framework
    for the establishment of the apical-basal embryonic axis in plants. <i>Current
    Biology</i>. Cell Press. <a href="https://doi.org/10.1016/j.cub.2013.10.038">https://doi.org/10.1016/j.cub.2013.10.038</a>
  chicago: Wabnik, Krzysztof T, Hélène Robert, Richard Smith, and Jiří Friml. “Modeling
    Framework for the Establishment of the Apical-Basal Embryonic Axis in Plants.”
    <i>Current Biology</i>. Cell Press, 2013. <a href="https://doi.org/10.1016/j.cub.2013.10.038">https://doi.org/10.1016/j.cub.2013.10.038</a>.
  ieee: K. T. Wabnik, H. Robert, R. Smith, and J. Friml, “Modeling framework for the
    establishment of the apical-basal embryonic axis in plants,” <i>Current Biology</i>,
    vol. 23, no. 24. Cell Press, pp. 2513–2518, 2013.
  ista: Wabnik KT, Robert H, Smith R, Friml J. 2013. Modeling framework for the establishment
    of the apical-basal embryonic axis in plants. Current Biology. 23(24), 2513–2518.
  mla: Wabnik, Krzysztof T., et al. “Modeling Framework for the Establishment of the
    Apical-Basal Embryonic Axis in Plants.” <i>Current Biology</i>, vol. 23, no. 24,
    Cell Press, 2013, pp. 2513–18, doi:<a href="https://doi.org/10.1016/j.cub.2013.10.038">10.1016/j.cub.2013.10.038</a>.
  short: K.T. Wabnik, H. Robert, R. Smith, J. Friml, Current Biology 23 (2013) 2513–2518.
date_created: 2018-12-11T11:46:58Z
date_published: 2013-12-16T00:00:00Z
date_updated: 2021-01-12T08:01:24Z
day: '16'
department:
- _id: EvBe
- _id: JiFr
doi: 10.1016/j.cub.2013.10.038
ec_funded: 1
intvolume: '        23'
issue: '24'
language:
- iso: eng
month: '12'
oa_version: None
page: 2513 - 2518
project:
- _id: 25716A02-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '282300'
  name: Polarity and subcellular dynamics in plants
publication: Current Biology
publication_status: published
publisher: Cell Press
publist_id: '7292'
quality_controlled: '1'
scopus_import: 1
status: public
title: Modeling framework for the establishment of the apical-basal embryonic axis
  in plants
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 23
year: '2013'
...
---
_id: '528'
abstract:
- lang: eng
  text: Establishment of the embryonic axis foreshadows the main body axis of adults
    both in plants and in animals, but underlying mechanisms are considered distinct.
    Plants utilize directional, cell-to-cell transport of the growth hormone auxin
    [1, 2] to generate an asymmetric auxin response that specifies the embryonic apical-basal
    axis [3-6]. The auxin flow directionality depends on the polarized subcellular
    localization of PIN-FORMED (PIN) auxin transporters [7, 8]. It remains unknown
    which mechanisms and spatial cues guide cell polarization and axis orientation
    in early embryos. Herein, we provide conceptually novel insights into the formation
    of embryonic axis in Arabidopsis by identifying a crucial role of localized tryptophan-dependent
    auxin biosynthesis [9-12]. Local auxin production at the base of young embryos
    and the accompanying PIN7-mediated auxin flow toward the proembryo are required
    for the apical auxin response maximum and the specification of apical embryonic
    structures. Later in embryogenesis, the precisely timed onset of localized apical
    auxin biosynthesis mediates PIN1 polarization, basal auxin response maximum, and
    specification of the root pole. Thus, the tight spatiotemporal control of distinct
    local auxin sources provides a necessary, non-cell-autonomous trigger for the
    coordinated cell polarization and subsequent apical-basal axis orientation during
    embryogenesis and, presumably, also for other polarization events during postembryonic
    plant life [13, 14].
author:
- first_name: Hélène
  full_name: Robert, Hélène
  last_name: Robert
- first_name: Peter
  full_name: Grones, Peter
  id: 399876EC-F248-11E8-B48F-1D18A9856A87
  last_name: Grones
- first_name: Anna
  full_name: Stepanova, Anna
  last_name: Stepanova
- first_name: Linda
  full_name: Robles, Linda
  last_name: Robles
- first_name: Annemarie
  full_name: Lokerse, Annemarie
  last_name: Lokerse
- first_name: Jose
  full_name: Alonso, Jose
  last_name: Alonso
- first_name: Dolf
  full_name: Weijers, Dolf
  last_name: Weijers
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: Robert H, Grones P, Stepanova A, et al. Local auxin sources orient the apical
    basal axis in arabidopsis embryos. <i>Current Biology</i>. 2013;23(24):2506-2512.
    doi:<a href="https://doi.org/10.1016/j.cub.2013.09.039">10.1016/j.cub.2013.09.039</a>
  apa: Robert, H., Grones, P., Stepanova, A., Robles, L., Lokerse, A., Alonso, J.,
    … Friml, J. (2013). Local auxin sources orient the apical basal axis in arabidopsis
    embryos. <i>Current Biology</i>. Cell Press. <a href="https://doi.org/10.1016/j.cub.2013.09.039">https://doi.org/10.1016/j.cub.2013.09.039</a>
  chicago: Robert, Hélène, Peter Grones, Anna Stepanova, Linda Robles, Annemarie Lokerse,
    Jose Alonso, Dolf Weijers, and Jiří Friml. “Local Auxin Sources Orient the Apical
    Basal Axis in Arabidopsis Embryos.” <i>Current Biology</i>. Cell Press, 2013.
    <a href="https://doi.org/10.1016/j.cub.2013.09.039">https://doi.org/10.1016/j.cub.2013.09.039</a>.
  ieee: H. Robert <i>et al.</i>, “Local auxin sources orient the apical basal axis
    in arabidopsis embryos,” <i>Current Biology</i>, vol. 23, no. 24. Cell Press,
    pp. 2506–2512, 2013.
  ista: Robert H, Grones P, Stepanova A, Robles L, Lokerse A, Alonso J, Weijers D,
    Friml J. 2013. Local auxin sources orient the apical basal axis in arabidopsis
    embryos. Current Biology. 23(24), 2506–2512.
  mla: Robert, Hélène, et al. “Local Auxin Sources Orient the Apical Basal Axis in
    Arabidopsis Embryos.” <i>Current Biology</i>, vol. 23, no. 24, Cell Press, 2013,
    pp. 2506–12, doi:<a href="https://doi.org/10.1016/j.cub.2013.09.039">10.1016/j.cub.2013.09.039</a>.
  short: H. Robert, P. Grones, A. Stepanova, L. Robles, A. Lokerse, J. Alonso, D.
    Weijers, J. Friml, Current Biology 23 (2013) 2506–2512.
date_created: 2018-12-11T11:46:59Z
date_published: 2013-12-16T00:00:00Z
date_updated: 2021-01-12T08:01:25Z
day: '16'
department:
- _id: JiFr
doi: 10.1016/j.cub.2013.09.039
ec_funded: 1
intvolume: '        23'
issue: '24'
language:
- iso: eng
month: '12'
oa_version: None
page: 2506 - 2512
project:
- _id: 25716A02-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '282300'
  name: Polarity and subcellular dynamics in plants
publication: Current Biology
publication_status: published
publisher: Cell Press
publist_id: '7291'
quality_controlled: '1'
scopus_import: 1
status: public
title: Local auxin sources orient the apical basal axis in arabidopsis embryos
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 23
year: '2013'
...
---
_id: '2181'
abstract:
- lang: eng
  text: 'There is a trade-off between performance and correctness in implementing
    concurrent data structures. Better performance may be achieved at the expense
    of relaxing correctness, by redefining the semantics of data structures. We address
    such a redefinition of data structure semantics and present a systematic and formal
    framework for obtaining new data structures by quantitatively relaxing existing
    ones. We view a data structure as a sequential specification S containing all
    &quot;legal&quot; sequences over an alphabet of method calls. Relaxing the data
    structure corresponds to defining a distance from any sequence over the alphabet
    to the sequential specification: the k-relaxed sequential specification contains
    all sequences over the alphabet within distance k from the original specification.
    In contrast to other existing work, our relaxations are semantic (distance in
    terms of data structure states). As an instantiation of our framework, we present
    two simple yet generic relaxation schemes, called out-of-order and stuttering
    relaxation, along with several ways of computing distances. We show that the out-of-order
    relaxation, when further instantiated to stacks, queues, and priority queues,
    amounts to tolerating bounded out-of-order behavior, which cannot be captured
    by a purely syntactic relaxation (distance in terms of sequence manipulation,
    e.g. edit distance). We give concurrent implementations of relaxed data structures
    and demonstrate that bounded relaxations provide the means for trading correctness
    for performance in a controlled way. The relaxations are monotonic which further
    highlights the trade-off: increasing k increases the number of permitted sequences,
    which as we demonstrate can lead to better performance. Finally, since a relaxed
    stack or queue also implements a pool, we actually have new concurrent pool implementations
    that outperform the state-of-the-art ones.'
acknowledgement: ' and an Elise Richter Fellowship (Austrian Science Fund V00125). '
author:
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Christoph
  full_name: Kirsch, Christoph
  last_name: Kirsch
- first_name: Hannes
  full_name: Payer, Hannes
  last_name: Payer
- first_name: Ali
  full_name: Sezgin, Ali
  id: 4C7638DA-F248-11E8-B48F-1D18A9856A87
  last_name: Sezgin
- first_name: Ana
  full_name: Sokolova, Ana
  last_name: Sokolova
citation:
  ama: 'Henzinger TA, Kirsch C, Payer H, Sezgin A, Sokolova A. Quantitative relaxation
    of concurrent data structures. In: <i>Proceedings of the 40th Annual ACM SIGPLAN-SIGACT
    Symposium on Principles of Programming Language</i>. ACM; 2013:317-328. doi:<a
    href="https://doi.org/10.1145/2429069.2429109">10.1145/2429069.2429109</a>'
  apa: 'Henzinger, T. A., Kirsch, C., Payer, H., Sezgin, A., &#38; Sokolova, A. (2013).
    Quantitative relaxation of concurrent data structures. In <i>Proceedings of the
    40th annual ACM SIGPLAN-SIGACT symposium on Principles of programming language</i>
    (pp. 317–328). Rome, Italy: ACM. <a href="https://doi.org/10.1145/2429069.2429109">https://doi.org/10.1145/2429069.2429109</a>'
  chicago: Henzinger, Thomas A, Christoph Kirsch, Hannes Payer, Ali Sezgin, and Ana
    Sokolova. “Quantitative Relaxation of Concurrent Data Structures.” In <i>Proceedings
    of the 40th Annual ACM SIGPLAN-SIGACT Symposium on Principles of Programming Language</i>,
    317–28. ACM, 2013. <a href="https://doi.org/10.1145/2429069.2429109">https://doi.org/10.1145/2429069.2429109</a>.
  ieee: T. A. Henzinger, C. Kirsch, H. Payer, A. Sezgin, and A. Sokolova, “Quantitative
    relaxation of concurrent data structures,” in <i>Proceedings of the 40th annual
    ACM SIGPLAN-SIGACT symposium on Principles of programming language</i>, Rome,
    Italy, 2013, pp. 317–328.
  ista: 'Henzinger TA, Kirsch C, Payer H, Sezgin A, Sokolova A. 2013. Quantitative
    relaxation of concurrent data structures. Proceedings of the 40th annual ACM SIGPLAN-SIGACT
    symposium on Principles of programming language. POPL: Principles of Programming
    Languages, 317–328.'
  mla: Henzinger, Thomas A., et al. “Quantitative Relaxation of Concurrent Data Structures.”
    <i>Proceedings of the 40th Annual ACM SIGPLAN-SIGACT Symposium on Principles of
    Programming Language</i>, ACM, 2013, pp. 317–28, doi:<a href="https://doi.org/10.1145/2429069.2429109">10.1145/2429069.2429109</a>.
  short: T.A. Henzinger, C. Kirsch, H. Payer, A. Sezgin, A. Sokolova, in:, Proceedings
    of the 40th Annual ACM SIGPLAN-SIGACT Symposium on Principles of Programming Language,
    ACM, 2013, pp. 317–328.
conference:
  end_date: 2013-01-25
  location: Rome, Italy
  name: 'POPL: Principles of Programming Languages'
  start_date: 2013-01-23
date_created: 2018-12-11T11:56:11Z
date_published: 2013-01-01T00:00:00Z
date_updated: 2023-02-21T16:06:49Z
day: '01'
ddc:
- '000'
- '004'
department:
- _id: ToHe
doi: 10.1145/2429069.2429109
ec_funded: 1
file:
- access_level: open_access
  checksum: adf465e70948f4e80e48057524516456
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:14:33Z
  date_updated: 2020-07-14T12:45:31Z
  file_id: '5086'
  file_name: IST-2014-198-v1+1_popl128-henzinger-clean.pdf
  file_size: 294689
  relation: main_file
file_date_updated: 2020-07-14T12:45:31Z
has_accepted_license: '1'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Submitted Version
page: 317 - 328
project:
- _id: 25EE3708-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '267989'
  name: Quantitative Reactive Modeling
- _id: 25F5A88A-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S11402-N23
  name: Moderne Concurrency Paradigms
publication: Proceedings of the 40th annual ACM SIGPLAN-SIGACT symposium on Principles
  of programming language
publication_identifier:
  isbn:
  - 978-1-4503-1832-7
publication_status: published
publisher: ACM
publist_id: '4801'
pubrep_id: '198'
quality_controlled: '1'
related_material:
  record:
  - id: '10901'
    relation: later_version
    status: deleted
scopus_import: 1
status: public
title: Quantitative relaxation of concurrent data structures
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2013'
...
---
_id: '2182'
abstract:
- lang: eng
  text: We propose a general framework for abstraction with respect to quantitative
    properties, such as worst-case execution time, or power consumption. Our framework
    provides a systematic way for counter-example guided abstraction refinement for
    quantitative properties. The salient aspect of the framework is that it allows
    anytime verification, that is, verification algorithms that can be stopped at
    any time (for example, due to exhaustion of memory), and report approximations
    that improve monotonically when the algorithms are given more time. We instantiate
    the framework with a number of quantitative abstractions and refinement schemes,
    which differ in terms of how much quantitative information they keep from the
    original system. We introduce both state-based and trace-based quantitative abstractions,
    and we describe conditions that define classes of quantitative properties for
    which the abstractions provide over-approximations. We give algorithms for evaluating
    the quantitative properties on the abstract systems. We present algorithms for
    counter-example based refinements for quantitative properties for both state-based
    and segment-based abstractions. We perform a case study on worst-case execution
    time of executables to evaluate the anytime verification aspect and the quantitative
    abstractions we proposed.
author:
- first_name: Pavol
  full_name: Cerny, Pavol
  id: 4DCBEFFE-F248-11E8-B48F-1D18A9856A87
  last_name: Cerny
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Arjun
  full_name: Radhakrishna, Arjun
  id: 3B51CAC4-F248-11E8-B48F-1D18A9856A87
  last_name: Radhakrishna
citation:
  ama: 'Cerny P, Henzinger TA, Radhakrishna A. Quantitative abstraction refinement.
    In: <i>Proceedings of the 40th Annual ACM SIGPLAN-SIGACT Symposium on Principles
    of Programming Language</i>. ACM; 2013:115-128. doi:<a href="https://doi.org/10.1145/2429069.2429085">10.1145/2429069.2429085</a>'
  apa: 'Cerny, P., Henzinger, T. A., &#38; Radhakrishna, A. (2013). Quantitative abstraction
    refinement. In <i>Proceedings of the 40th annual ACM SIGPLAN-SIGACT symposium
    on Principles of programming language</i> (pp. 115–128). Rome, Italy: ACM. <a
    href="https://doi.org/10.1145/2429069.2429085">https://doi.org/10.1145/2429069.2429085</a>'
  chicago: Cerny, Pavol, Thomas A Henzinger, and Arjun Radhakrishna. “Quantitative
    Abstraction Refinement.” In <i>Proceedings of the 40th Annual ACM SIGPLAN-SIGACT
    Symposium on Principles of Programming Language</i>, 115–28. ACM, 2013. <a href="https://doi.org/10.1145/2429069.2429085">https://doi.org/10.1145/2429069.2429085</a>.
  ieee: P. Cerny, T. A. Henzinger, and A. Radhakrishna, “Quantitative abstraction
    refinement,” in <i>Proceedings of the 40th annual ACM SIGPLAN-SIGACT symposium
    on Principles of programming language</i>, Rome, Italy, 2013, pp. 115–128.
  ista: 'Cerny P, Henzinger TA, Radhakrishna A. 2013. Quantitative abstraction refinement.
    Proceedings of the 40th annual ACM SIGPLAN-SIGACT symposium on Principles of programming
    language. POPL: Principles of Programming Languages, 115–128.'
  mla: Cerny, Pavol, et al. “Quantitative Abstraction Refinement.” <i>Proceedings
    of the 40th Annual ACM SIGPLAN-SIGACT Symposium on Principles of Programming Language</i>,
    ACM, 2013, pp. 115–28, doi:<a href="https://doi.org/10.1145/2429069.2429085">10.1145/2429069.2429085</a>.
  short: P. Cerny, T.A. Henzinger, A. Radhakrishna, in:, Proceedings of the 40th Annual
    ACM SIGPLAN-SIGACT Symposium on Principles of Programming Language, ACM, 2013,
    pp. 115–128.
conference:
  end_date: 2013-01-25
  location: Rome, Italy
  name: 'POPL: Principles of Programming Languages'
  start_date: 2013-07-23
date_created: 2018-12-11T11:56:11Z
date_published: 2013-01-01T00:00:00Z
date_updated: 2021-01-12T06:55:50Z
day: '01'
department:
- _id: ToHe
doi: 10.1145/2429069.2429085
ec_funded: 1
language:
- iso: eng
month: '01'
oa_version: None
page: 115 - 128
project:
- _id: 25EE3708-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '267989'
  name: Quantitative Reactive Modeling
- _id: 25F5A88A-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S11402-N23
  name: Moderne Concurrency Paradigms
publication: Proceedings of the 40th annual ACM SIGPLAN-SIGACT symposium on Principles
  of programming language
publication_status: published
publisher: ACM
publist_id: '4800'
quality_controlled: '1'
scopus_import: 1
status: public
title: Quantitative abstraction refinement
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2013'
...
---
_id: '2209'
abstract:
- lang: eng
  text: "A straight skeleton is a well-known geometric structure, and several algorithms
    exist to construct the straight skeleton for a given polygon or planar straight-line
    graph. In this paper, we ask the reverse question: Given the straight skeleton
    (in form of a planar straight-line graph, with some rays to infinity), can we
    reconstruct a planar straight-line graph for which this was the straight skeleton?
    We show how to reduce this problem to the problem of finding a line that intersects
    a set of convex polygons. We can find these convex polygons and all such lines
    in $O(nlog n)$ time in the Real RAM computer model, where $n$ denotes the number
    of edges of the input graph. We also explain how our approach can be used for
    recognizing Voronoi diagrams of points, thereby completing a partial solution
    provided by Ash and Bolker in 1985.\r\n"
alternative_title:
- '2013 10th International Symposium on Voronoi Diagrams in Science and Engineering
  (ISVD 2013) '
author:
- first_name: Therese
  full_name: Biedl, Therese
  last_name: Biedl
- first_name: Martin
  full_name: Held, Martin
  last_name: Held
- first_name: Stefan
  full_name: Huber, Stefan
  id: 4700A070-F248-11E8-B48F-1D18A9856A87
  last_name: Huber
  orcid: 0000-0002-8871-5814
citation:
  ama: 'Biedl T, Held M, Huber S. Recognizing straight skeletons and Voronoi diagrams
    and reconstructing their input. In: IEEE; 2013:37-46. doi:<a href="https://doi.org/10.1109/ISVD.2013.11">10.1109/ISVD.2013.11</a>'
  apa: 'Biedl, T., Held, M., &#38; Huber, S. (2013). Recognizing straight skeletons
    and Voronoi diagrams and reconstructing their input (pp. 37–46). Presented at
    the ISVD: Voronoi Diagrams in Science and Engineering, St. Petersburg, Russia:
    IEEE. <a href="https://doi.org/10.1109/ISVD.2013.11">https://doi.org/10.1109/ISVD.2013.11</a>'
  chicago: Biedl, Therese, Martin Held, and Stefan Huber. “Recognizing Straight Skeletons
    and Voronoi Diagrams and Reconstructing Their Input,” 37–46. IEEE, 2013. <a href="https://doi.org/10.1109/ISVD.2013.11">https://doi.org/10.1109/ISVD.2013.11</a>.
  ieee: 'T. Biedl, M. Held, and S. Huber, “Recognizing straight skeletons and Voronoi
    diagrams and reconstructing their input,” presented at the ISVD: Voronoi Diagrams
    in Science and Engineering, St. Petersburg, Russia, 2013, pp. 37–46.'
  ista: 'Biedl T, Held M, Huber S. 2013. Recognizing straight skeletons and Voronoi
    diagrams and reconstructing their input. ISVD: Voronoi Diagrams in Science and
    Engineering, 2013 10th International Symposium on Voronoi Diagrams in Science
    and Engineering (ISVD 2013) , , 37–46.'
  mla: Biedl, Therese, et al. <i>Recognizing Straight Skeletons and Voronoi Diagrams
    and Reconstructing Their Input</i>. IEEE, 2013, pp. 37–46, doi:<a href="https://doi.org/10.1109/ISVD.2013.11">10.1109/ISVD.2013.11</a>.
  short: T. Biedl, M. Held, S. Huber, in:, IEEE, 2013, pp. 37–46.
conference:
  end_date: 2013-07-10
  location: St. Petersburg, Russia
  name: 'ISVD: Voronoi Diagrams in Science and Engineering'
  start_date: 2013-07-08
date_created: 2018-12-11T11:56:20Z
date_published: 2013-12-01T00:00:00Z
date_updated: 2021-01-12T06:56:00Z
day: '01'
department:
- _id: HeEd
doi: 10.1109/ISVD.2013.11
language:
- iso: eng
month: '12'
oa_version: None
page: 37 - 46
publication_identifier:
  eisbn:
  - '978-0-7695-5037-4 '
publication_status: published
publisher: IEEE
publist_id: '4763'
quality_controlled: '1'
scopus_import: 1
status: public
title: Recognizing straight skeletons and Voronoi diagrams and reconstructing their
  input
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2013'
...
---
_id: '2210'
abstract:
- lang: eng
  text: 'A straight skeleton is a well-known geometric structure, and several algorithms
    exist to construct the straight skeleton for a given polygon. In this paper, we
    ask the reverse question: Given the straight skeleton (in form of a tree with
    a drawing in the plane, but with the exact position of the leaves unspecified),
    can we reconstruct the polygon? We show that in most cases there exists at most
    one polygon; in the remaining case there is an infinite number of polygons determined
    by one angle that can range in an interval. We can find this (set of) polygon(s)
    in linear time in the Real RAM computer model.'
author:
- first_name: Therese
  full_name: Biedl, Therese
  last_name: Biedl
- first_name: Martin
  full_name: Held, Martin
  last_name: Held
- first_name: Stefan
  full_name: Huber, Stefan
  id: 4700A070-F248-11E8-B48F-1D18A9856A87
  last_name: Huber
  orcid: 0000-0002-8871-5814
citation:
  ama: 'Biedl T, Held M, Huber S. Reconstructing polygons from embedded straight skeletons.
    In: <i>29th European Workshop on Computational Geometry</i>. TU Braunschweig;
    2013:95-98.'
  apa: 'Biedl, T., Held, M., &#38; Huber, S. (2013). Reconstructing polygons from
    embedded straight skeletons. In <i>29th European Workshop on Computational Geometry</i>
    (pp. 95–98). Braunschweig, Germany: TU Braunschweig.'
  chicago: Biedl, Therese, Martin Held, and Stefan Huber. “Reconstructing Polygons
    from Embedded Straight Skeletons.” In <i>29th European Workshop on Computational
    Geometry</i>, 95–98. TU Braunschweig, 2013.
  ieee: T. Biedl, M. Held, and S. Huber, “Reconstructing polygons from embedded straight
    skeletons,” in <i>29th European Workshop on Computational Geometry</i>, Braunschweig,
    Germany, 2013, pp. 95–98.
  ista: 'Biedl T, Held M, Huber S. 2013. Reconstructing polygons from embedded straight
    skeletons. 29th European Workshop on Computational Geometry. EuroCG: European
    Workshop on Computational Geometry, 95–98.'
  mla: Biedl, Therese, et al. “Reconstructing Polygons from Embedded Straight Skeletons.”
    <i>29th European Workshop on Computational Geometry</i>, TU Braunschweig, 2013,
    pp. 95–98.
  short: T. Biedl, M. Held, S. Huber, in:, 29th European Workshop on Computational
    Geometry, TU Braunschweig, 2013, pp. 95–98.
conference:
  end_date: 2013-03-20
  location: Braunschweig, Germany
  name: 'EuroCG: European Workshop on Computational Geometry'
  start_date: 2013-03-17
date_created: 2018-12-11T11:56:21Z
date_published: 2013-03-01T00:00:00Z
date_updated: 2021-01-12T06:56:00Z
day: '01'
department:
- _id: HeEd
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: http://www.ibr.cs.tu-bs.de/alg/eurocg13/booklet_eurocg13.pdf
month: '03'
oa: 1
oa_version: Submitted Version
page: 95 - 98
publication: 29th European Workshop on Computational Geometry
publication_status: published
publisher: TU Braunschweig
publist_id: '4762'
status: public
title: Reconstructing polygons from embedded straight skeletons
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2013'
...
---
_id: '2237'
abstract:
- lang: eng
  text: We describe new extensions of the Vampire theorem prover for computing tree
    interpolants. These extensions generalize Craig interpolation in Vampire, and
    can also be used to derive sequence interpolants. We evaluated our implementation
    on a large number of examples over the theory of linear integer arithmetic and
    integer-indexed arrays, with and without quantifiers. When compared to other methods,
    our experiments show that some examples could only be solved by our implementation.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Régis
  full_name: Blanc, Régis
  last_name: Blanc
- first_name: Ashutosh
  full_name: Gupta, Ashutosh
  id: 335E5684-F248-11E8-B48F-1D18A9856A87
  last_name: Gupta
- first_name: Laura
  full_name: Kovács, Laura
  last_name: Kovács
- first_name: Bernhard
  full_name: Kragl, Bernhard
  id: 320FC952-F248-11E8-B48F-1D18A9856A87
  last_name: Kragl
  orcid: 0000-0001-7745-9117
citation:
  ama: Blanc R, Gupta A, Kovács L, Kragl B. Tree interpolation in Vampire. 2013;8312:173-181.
    doi:<a href="https://doi.org/10.1007/978-3-642-45221-5_13">10.1007/978-3-642-45221-5_13</a>
  apa: 'Blanc, R., Gupta, A., Kovács, L., &#38; Kragl, B. (2013). Tree interpolation
    in Vampire. Presented at the LPAR: Logic for Programming, Artificial Intelligence,
    and Reasoning, Stellenbosch, South Africa: Springer. <a href="https://doi.org/10.1007/978-3-642-45221-5_13">https://doi.org/10.1007/978-3-642-45221-5_13</a>'
  chicago: Blanc, Régis, Ashutosh Gupta, Laura Kovács, and Bernhard Kragl. “Tree Interpolation
    in Vampire.” Lecture Notes in Computer Science. Springer, 2013. <a href="https://doi.org/10.1007/978-3-642-45221-5_13">https://doi.org/10.1007/978-3-642-45221-5_13</a>.
  ieee: R. Blanc, A. Gupta, L. Kovács, and B. Kragl, “Tree interpolation in Vampire,”
    vol. 8312. Springer, pp. 173–181, 2013.
  ista: Blanc R, Gupta A, Kovács L, Kragl B. 2013. Tree interpolation in Vampire.
    8312, 173–181.
  mla: Blanc, Régis, et al. <i>Tree Interpolation in Vampire</i>. Vol. 8312, Springer,
    2013, pp. 173–81, doi:<a href="https://doi.org/10.1007/978-3-642-45221-5_13">10.1007/978-3-642-45221-5_13</a>.
  short: R. Blanc, A. Gupta, L. Kovács, B. Kragl, 8312 (2013) 173–181.
conference:
  end_date: 2013-12-19
  location: Stellenbosch, South Africa
  name: 'LPAR: Logic for Programming, Artificial Intelligence, and Reasoning'
  start_date: 2013-12-14
date_created: 2018-12-11T11:56:29Z
date_published: 2013-01-14T00:00:00Z
date_updated: 2020-08-11T10:09:42Z
day: '14'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.1007/978-3-642-45221-5_13
file:
- access_level: open_access
  checksum: 9cebaafca032e6769d273f393305c705
  content_type: application/pdf
  creator: dernst
  date_created: 2020-05-15T11:10:40Z
  date_updated: 2020-07-14T12:45:34Z
  file_id: '7858'
  file_name: 2013_LPAR_Blanc.pdf
  file_size: 279206
  relation: main_file
file_date_updated: 2020-07-14T12:45:34Z
has_accepted_license: '1'
intvolume: '      8312'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Submitted Version
page: 173 - 181
project:
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S 11407_N23
  name: Rigorous Systems Engineering
publication_status: published
publisher: Springer
publist_id: '4724'
quality_controlled: '1'
scopus_import: 1
series_title: Lecture Notes in Computer Science
status: public
title: Tree interpolation in Vampire
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8312
year: '2013'
...
---
_id: '2238'
abstract:
- lang: eng
  text: "We study the problem of achieving a given value in Markov decision processes
    (MDPs) with several independent discounted reward objectives. We consider a generalised
    version of discounted reward objectives, in which the amount of discounting depends
    on the states visited and on the objective. This definition extends the usual
    definition of discounted reward, and allows to capture the systems in which the
    value of different commodities diminish at different and variable rates.\r\n\r\nWe
    establish results for two prominent subclasses of the problem, namely state-discount
    models where the discount factors are only dependent on the state of the MDP (and
    independent of the objective), and reward-discount models where they are only
    dependent on the objective (but not on the state of the MDP). For the state-discount
    models we use a straightforward reduction to expected total reward and show that
    the problem whether a value is achievable can be solved in polynomial time. For
    the reward-discount model we show that memory and randomisation of the strategies
    are required, but nevertheless that the problem is decidable and it is sufficient
    to consider strategies which after a certain number of steps behave in a memoryless
    way.\r\n\r\nFor the general case, we show that when restricted to graphs (i.e.
    MDPs with no randomisation), pure strategies and discount factors of the form
    1/n where n is an integer, the problem is in PSPACE and finite memory suffices
    for achieving a given value. We also show that when the discount factors are not
    of the form 1/n, the memory required by a strategy can be infinite.\r\n"
alternative_title:
- LNCS
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Vojtěch
  full_name: Forejt, Vojtěch
  last_name: Forejt
- first_name: Dominik
  full_name: Wojtczak, Dominik
  last_name: Wojtczak
citation:
  ama: Chatterjee K, Forejt V, Wojtczak D. Multi-objective discounted reward verification
    in graphs and MDPs. 2013;8312:228-242. doi:<a href="https://doi.org/10.1007/978-3-642-45221-5_17">10.1007/978-3-642-45221-5_17</a>
  apa: 'Chatterjee, K., Forejt, V., &#38; Wojtczak, D. (2013). Multi-objective discounted
    reward verification in graphs and MDPs. Presented at the LPAR: Logic for Programming,
    Artificial Intelligence, and Reasoning, Stellenbosch, South Africa: Springer.
    <a href="https://doi.org/10.1007/978-3-642-45221-5_17">https://doi.org/10.1007/978-3-642-45221-5_17</a>'
  chicago: Chatterjee, Krishnendu, Vojtěch Forejt, and Dominik Wojtczak. “Multi-Objective
    Discounted Reward Verification in Graphs and MDPs.” Lecture Notes in Computer
    Science. Springer, 2013. <a href="https://doi.org/10.1007/978-3-642-45221-5_17">https://doi.org/10.1007/978-3-642-45221-5_17</a>.
  ieee: K. Chatterjee, V. Forejt, and D. Wojtczak, “Multi-objective discounted reward
    verification in graphs and MDPs,” vol. 8312. Springer, pp. 228–242, 2013.
  ista: Chatterjee K, Forejt V, Wojtczak D. 2013. Multi-objective discounted reward
    verification in graphs and MDPs. 8312, 228–242.
  mla: Chatterjee, Krishnendu, et al. <i>Multi-Objective Discounted Reward Verification
    in Graphs and MDPs</i>. Vol. 8312, Springer, 2013, pp. 228–42, doi:<a href="https://doi.org/10.1007/978-3-642-45221-5_17">10.1007/978-3-642-45221-5_17</a>.
  short: K. Chatterjee, V. Forejt, D. Wojtczak, 8312 (2013) 228–242.
conference:
  end_date: 2013-12-19
  location: Stellenbosch, South Africa
  name: 'LPAR: Logic for Programming, Artificial Intelligence, and Reasoning'
  start_date: 2013-12-14
date_created: 2018-12-11T11:56:30Z
date_published: 2013-12-01T00:00:00Z
date_updated: 2020-08-11T10:09:42Z
day: '01'
department:
- _id: KrCh
doi: 10.1007/978-3-642-45221-5_17
ec_funded: 1
intvolume: '      8312'
language:
- iso: eng
month: '12'
oa_version: None
page: 228 - 242
project:
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
publication_status: published
publisher: Springer
publist_id: '4723'
quality_controlled: '1'
scopus_import: 1
series_title: Lecture Notes in Computer Science
status: public
title: Multi-objective discounted reward verification in graphs and MDPs
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8312
year: '2013'
...
---
_id: '2243'
abstract:
- lang: eng
  text: We show that modal logic over universally first-order definable classes of
    transitive frames is decidable. More precisely, let K be an arbitrary class of
    transitive Kripke frames definable by a universal first-order sentence. We show
    that the global and finite global satisfiability problems of modal logic over
    K are decidable in NP, regardless of choice of K. We also show that the local
    satisfiability and the finite local satisfiability problems of modal logic over
    K are decidable in NEXPTIME.
alternative_title:
- LIPIcs
author:
- first_name: Jakub
  full_name: Michaliszyn, Jakub
  last_name: Michaliszyn
- first_name: Jan
  full_name: Otop, Jan
  id: 2FC5DA74-F248-11E8-B48F-1D18A9856A87
  last_name: Otop
citation:
  ama: Michaliszyn J, Otop J. Elementary modal logics over transitive structures.
    2013;23:563-577. doi:<a href="https://doi.org/10.4230/LIPIcs.CSL.2013.563">10.4230/LIPIcs.CSL.2013.563</a>
  apa: 'Michaliszyn, J., &#38; Otop, J. (2013). Elementary modal logics over transitive
    structures. Presented at the CSL: Computer Science Logic, Torino, Italy: Schloss
    Dagstuhl - Leibniz-Zentrum für Informatik. <a href="https://doi.org/10.4230/LIPIcs.CSL.2013.563">https://doi.org/10.4230/LIPIcs.CSL.2013.563</a>'
  chicago: Michaliszyn, Jakub, and Jan Otop. “Elementary Modal Logics over Transitive
    Structures.” Leibniz International Proceedings in Informatics. Schloss Dagstuhl
    - Leibniz-Zentrum für Informatik, 2013. <a href="https://doi.org/10.4230/LIPIcs.CSL.2013.563">https://doi.org/10.4230/LIPIcs.CSL.2013.563</a>.
  ieee: J. Michaliszyn and J. Otop, “Elementary modal logics over transitive structures,”
    vol. 23. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, pp. 563–577, 2013.
  ista: Michaliszyn J, Otop J. 2013. Elementary modal logics over transitive structures.
    23, 563–577.
  mla: Michaliszyn, Jakub, and Jan Otop. <i>Elementary Modal Logics over Transitive
    Structures</i>. Vol. 23, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2013,
    pp. 563–77, doi:<a href="https://doi.org/10.4230/LIPIcs.CSL.2013.563">10.4230/LIPIcs.CSL.2013.563</a>.
  short: J. Michaliszyn, J. Otop, 23 (2013) 563–577.
conference:
  end_date: 2013-09-05
  location: Torino, Italy
  name: 'CSL: Computer Science Logic'
  start_date: 2013-09-02
date_created: 2018-12-11T11:56:32Z
date_published: 2013-09-01T00:00:00Z
date_updated: 2020-08-11T10:09:42Z
day: '01'
ddc:
- '000'
- '004'
department:
- _id: ToHe
doi: 10.4230/LIPIcs.CSL.2013.563
ec_funded: 1
file:
- access_level: open_access
  checksum: e0732e73a8b1e39483df7717d53e3e35
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:12:11Z
  date_updated: 2020-07-14T12:45:34Z
  file_id: '4929'
  file_name: IST-2016-136-v1+2_39.pdf
  file_size: 454915
  relation: main_file
file_date_updated: 2020-07-14T12:45:34Z
has_accepted_license: '1'
intvolume: '        23'
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
page: 563 - 577
project:
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S 11407_N23
  name: Rigorous Systems Engineering
- _id: 25EE3708-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '267989'
  name: Quantitative Reactive Modeling
publication_status: published
publisher: Schloss Dagstuhl - Leibniz-Zentrum für Informatik
publist_id: '4708'
pubrep_id: '136'
quality_controlled: '1'
scopus_import: 1
series_title: Leibniz International Proceedings in Informatics
status: public
title: Elementary modal logics over transitive structures
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 23
year: '2013'
...
---
_id: '2244'
abstract:
- lang: eng
  text: 'We consider two systems (α1,...,αm) and (β1,...,βn) of curves drawn on a
    compact two-dimensional surface ℳ with boundary. Each αi and each βj is either
    an arc meeting the boundary of ℳ at its two endpoints, or a closed curve. The
    αi are pairwise disjoint except for possibly sharing endpoints, and similarly
    for the βj. We want to &quot;untangle&quot; the βj from the αi by a self-homeomorphism
    of ℳ; more precisely, we seek an homeomorphism φ: ℳ → ℳ fixing the boundary of
    ℳ pointwise such that the total number of crossings of the αi with the φ(βj) is
    as small as possible. This problem is motivated by an application in the algorithmic
    theory of embeddings and 3-manifolds. We prove that if ℳ is planar, i.e., a sphere
    with h ≥ 0 boundary components (&quot;holes&quot;), then O(mn) crossings can be
    achieved (independently of h), which is asymptotically tight, as an easy lower
    bound shows. In general, for an arbitrary (orientable or nonorientable) surface
    ℳ with h holes and of (orientable or nonorientable) genus g ≥ 0, we obtain an
    O((m + n)4) upper bound, again independent of h and g. '
acknowledgement: We would like to thank the authors of [GHR13] for mak- ing a draft
  of their paper available to us, and, in particular, T. Huynh for an e-mail correspondence.
alternative_title:
- LNCS
arxiv: 1
author:
- first_name: Jiří
  full_name: Matoušek, Jiří
  last_name: Matoušek
- first_name: Eric
  full_name: Sedgwick, Eric
  last_name: Sedgwick
- first_name: Martin
  full_name: Tancer, Martin
  id: 38AC689C-F248-11E8-B48F-1D18A9856A87
  last_name: Tancer
  orcid: 0000-0002-1191-6714
- first_name: Uli
  full_name: Wagner, Uli
  id: 36690CA2-F248-11E8-B48F-1D18A9856A87
  last_name: Wagner
  orcid: 0000-0002-1494-0568
citation:
  ama: Matoušek J, Sedgwick E, Tancer M, Wagner U. Untangling two systems of noncrossing
    curves. 2013;8242:472-483. doi:<a href="https://doi.org/10.1007/978-3-319-03841-4_41">10.1007/978-3-319-03841-4_41</a>
  apa: 'Matoušek, J., Sedgwick, E., Tancer, M., &#38; Wagner, U. (2013). Untangling
    two systems of noncrossing curves. Presented at the GD: Graph Drawing and Network
    Visualization, Bordeaux, France: Springer. <a href="https://doi.org/10.1007/978-3-319-03841-4_41">https://doi.org/10.1007/978-3-319-03841-4_41</a>'
  chicago: Matoušek, Jiří, Eric Sedgwick, Martin Tancer, and Uli Wagner. “Untangling
    Two Systems of Noncrossing Curves.” Lecture Notes in Computer Science. Springer,
    2013. <a href="https://doi.org/10.1007/978-3-319-03841-4_41">https://doi.org/10.1007/978-3-319-03841-4_41</a>.
  ieee: J. Matoušek, E. Sedgwick, M. Tancer, and U. Wagner, “Untangling two systems
    of noncrossing curves,” vol. 8242. Springer, pp. 472–483, 2013.
  ista: Matoušek J, Sedgwick E, Tancer M, Wagner U. 2013. Untangling two systems of
    noncrossing curves. 8242, 472–483.
  mla: Matoušek, Jiří, et al. <i>Untangling Two Systems of Noncrossing Curves</i>.
    Vol. 8242, Springer, 2013, pp. 472–83, doi:<a href="https://doi.org/10.1007/978-3-319-03841-4_41">10.1007/978-3-319-03841-4_41</a>.
  short: J. Matoušek, E. Sedgwick, M. Tancer, U. Wagner, 8242 (2013) 472–483.
conference:
  end_date: 2013-09-25
  location: Bordeaux, France
  name: 'GD: Graph Drawing and Network Visualization'
  start_date: 2013-09-23
date_created: 2018-12-11T11:56:32Z
date_published: 2013-09-01T00:00:00Z
date_updated: 2023-02-21T17:03:07Z
day: '01'
department:
- _id: UlWa
doi: 10.1007/978-3-319-03841-4_41
external_id:
  arxiv:
  - '1302.6475'
intvolume: '      8242'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1302.6475
month: '09'
oa: 1
oa_version: Preprint
page: 472 - 483
project:
- _id: 25FA3206-B435-11E9-9278-68D0E5697425
  grant_number: PP00P2_138948
  name: 'Embeddings in Higher Dimensions: Algorithms and Combinatorics'
publication_status: published
publisher: Springer
publist_id: '4707'
quality_controlled: '1'
related_material:
  record:
  - id: '1411'
    relation: later_version
    status: public
scopus_import: 1
series_title: Lecture Notes in Computer Science
status: public
title: Untangling two systems of noncrossing curves
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8242
year: '2013'
...
---
_id: '2247'
abstract:
- lang: eng
  text: Cooperative behavior, where one individual incurs a cost to help another,
    is a wide spread phenomenon. Here we study direct reciprocity in the context of
    the alternating Prisoner's Dilemma. We consider all strategies that can be implemented
    by one and two-state automata. We calculate the payoff matrix of all pairwise
    encounters in the presence of noise. We explore deterministic selection dynamics
    with and without mutation. Using different error rates and payoff values, we observe
    convergence to a small number of distinct equilibria. Two of them are uncooperative
    strict Nash equilibria representing always-defect (ALLD) and Grim. The third equilibrium
    is mixed and represents a cooperative alliance of several strategies, dominated
    by a strategy which we call Forgiver. Forgiver cooperates whenever the opponent
    has cooperated; it defects once when the opponent has defected, but subsequently
    Forgiver attempts to re-establish cooperation even if the opponent has defected
    again. Forgiver is not an evolutionarily stable strategy, but the alliance, which
    it rules, is asymptotically stable. For a wide range of parameter values the most
    commonly observed outcome is convergence to the mixed equilibrium, dominated by
    Forgiver. Our results show that although forgiving might incur a short-term loss
    it can lead to a long-term gain. Forgiveness facilitates stable cooperation in
    the presence of exploitation and noise.
article_number: e80814
author:
- first_name: Benjamin
  full_name: Zagorsky, Benjamin
  last_name: Zagorsky
- first_name: Johannes
  full_name: Reiter, Johannes
  id: 4A918E98-F248-11E8-B48F-1D18A9856A87
  last_name: Reiter
  orcid: 0000-0002-0170-7353
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Martin
  full_name: Nowak, Martin
  last_name: Nowak
citation:
  ama: Zagorsky B, Reiter J, Chatterjee K, Nowak M. Forgiver triumphs in alternating
    prisoner’s dilemma . <i>PLoS One</i>. 2013;8(12). doi:<a href="https://doi.org/10.1371/journal.pone.0080814">10.1371/journal.pone.0080814</a>
  apa: Zagorsky, B., Reiter, J., Chatterjee, K., &#38; Nowak, M. (2013). Forgiver
    triumphs in alternating prisoner’s dilemma . <i>PLoS One</i>. Public Library of
    Science. <a href="https://doi.org/10.1371/journal.pone.0080814">https://doi.org/10.1371/journal.pone.0080814</a>
  chicago: Zagorsky, Benjamin, Johannes Reiter, Krishnendu Chatterjee, and Martin
    Nowak. “Forgiver Triumphs in Alternating Prisoner’s Dilemma .” <i>PLoS One</i>.
    Public Library of Science, 2013. <a href="https://doi.org/10.1371/journal.pone.0080814">https://doi.org/10.1371/journal.pone.0080814</a>.
  ieee: B. Zagorsky, J. Reiter, K. Chatterjee, and M. Nowak, “Forgiver triumphs in
    alternating prisoner’s dilemma ,” <i>PLoS One</i>, vol. 8, no. 12. Public Library
    of Science, 2013.
  ista: Zagorsky B, Reiter J, Chatterjee K, Nowak M. 2013. Forgiver triumphs in alternating
    prisoner’s dilemma . PLoS One. 8(12), e80814.
  mla: Zagorsky, Benjamin, et al. “Forgiver Triumphs in Alternating Prisoner’s Dilemma
    .” <i>PLoS One</i>, vol. 8, no. 12, e80814, Public Library of Science, 2013, doi:<a
    href="https://doi.org/10.1371/journal.pone.0080814">10.1371/journal.pone.0080814</a>.
  short: B. Zagorsky, J. Reiter, K. Chatterjee, M. Nowak, PLoS One 8 (2013).
date_created: 2018-12-11T11:56:33Z
date_published: 2013-12-12T00:00:00Z
date_updated: 2023-09-07T11:40:43Z
day: '12'
ddc:
- '000'
department:
- _id: KrCh
doi: 10.1371/journal.pone.0080814
ec_funded: 1
file:
- access_level: open_access
  checksum: 808e8b9e6e89658bee4ffbbfac1bd19d
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:11:15Z
  date_updated: 2020-07-14T12:45:34Z
  file_id: '4868'
  file_name: IST-2016-409-v1+1_journal.pone.0080814.pdf
  file_size: 1050042
  relation: main_file
file_date_updated: 2020-07-14T12:45:34Z
has_accepted_license: '1'
intvolume: '         8'
issue: '12'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
project:
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S 11407_N23
  name: Rigorous Systems Engineering
- _id: 2584A770-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P 23499-N23
  name: Modern Graph Algorithmic Techniques in Formal Verification
- _id: 2587B514-B435-11E9-9278-68D0E5697425
  name: Microsoft Research Faculty Fellowship
publication: PLoS One
publication_status: published
publisher: Public Library of Science
publist_id: '4702'
pubrep_id: '409'
quality_controlled: '1'
related_material:
  record:
  - id: '9749'
    relation: research_data
    status: public
  - id: '1400'
    relation: dissertation_contains
    status: public
scopus_import: 1
status: public
title: 'Forgiver triumphs in alternating prisoner''s dilemma '
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8
year: '2013'
...
---
_id: '2256'
abstract:
- lang: eng
  text: Linked (Open) Data - bibliographic data on the Semantic Web. Report of the
    Working Group on Linked Data to the plenary assembly of the Austrian Library Network
    (translation of the title). Linked Data stands for a certain approach to publishing
    data on the Web. The underlying idea is to harmonise heterogeneous data sources
    of different origin in order to improve their accessibility and interoperability,
    effectively making them queryable as a big distributed database. This report summarises
    relevant developments in Europe as well as the Linked Data Working Group‘s strategic
    and technical considerations regarding the publishing of the Austrian Library
    Network’s (OBV’s) bibliographic datasets. It concludes with the mutual agreement
    that the implementation of Linked Data principles within the OBV can only be taken
    into consideration accompanied by a discussion about the provision of the datasets
    under a free license.
- lang: ger
  text: "Linked Data steht für eine bestimmte Form der Veröffentlichung von Daten
    via Internet. Die zu Grunde liegende Idee ist es, Daten verschiedenster Provenienz,
    die derzeit teilweise gar nicht oder nur schwer zugänglich sind, in möglichst
    \r\neinheitlicher Form miteinander zu verknüpfen und dadurch in ihrer Gesamtheit
    abfragbar zu machen.\r\nDieser Bericht fasst die Entwicklungen im europäischen
    Raum, sowie strategische und technische Überlegungen der AG Linked Data hinsichtlich
    der Veröffentlichung von bibliothekarischen Daten des Österreichischen Bibliothekenverbundes
    (OBV) zusammen und schließt mit der gemeinsamen Übereinkunft, dass die Umsetzung
    von Linked Data-Prinzipien im OBV nur in Zusammenhang mit einer Diskussion über
    die damit einhergehende Veröffentlichung der Daten unter einer freien Lizenz angedacht
    werden sollte."
author:
- first_name: Patrick
  full_name: Danowski, Patrick
  id: 2EBD1598-F248-11E8-B48F-1D18A9856A87
  last_name: Danowski
  orcid: 0000-0002-6026-4409
- first_name: Doron
  full_name: Goldfarb, Doron
  last_name: Goldfarb
- first_name: Verena
  full_name: Schaffner, Verena
  last_name: Schaffner
- first_name: Wolfram
  full_name: Seidler, Wolfram
  last_name: Seidler
citation:
  ama: Danowski P, Goldfarb D, Schaffner V, Seidler W. Linked (Open) Data - Bibliographische
    Daten im Semantic Web. <i>VÖB Mitteilungen</i>. 2013;66(3/4):559-587.
  apa: Danowski, P., Goldfarb, D., Schaffner, V., &#38; Seidler, W. (2013). Linked
    (Open) Data - Bibliographische Daten im Semantic Web. <i>VÖB Mitteilungen</i>.
    Verein Österreichischer Bibliothekarinnen und Bibliothekare.
  chicago: Danowski, Patrick, Doron Goldfarb, Verena Schaffner, and Wolfram Seidler.
    “Linked (Open) Data - Bibliographische Daten Im Semantic Web.” <i>VÖB Mitteilungen</i>.
    Verein Österreichischer Bibliothekarinnen und Bibliothekare, 2013.
  ieee: P. Danowski, D. Goldfarb, V. Schaffner, and W. Seidler, “Linked (Open) Data
    - Bibliographische Daten im Semantic Web,” <i>VÖB Mitteilungen</i>, vol. 66, no.
    3/4. Verein Österreichischer Bibliothekarinnen und Bibliothekare, pp. 559–587,
    2013.
  ista: Danowski P, Goldfarb D, Schaffner V, Seidler W. 2013. Linked (Open) Data -
    Bibliographische Daten im Semantic Web. VÖB Mitteilungen. 66(3/4), 559–587.
  mla: Danowski, Patrick, et al. “Linked (Open) Data - Bibliographische Daten Im Semantic
    Web.” <i>VÖB Mitteilungen</i>, vol. 66, no. 3/4, Verein Österreichischer Bibliothekarinnen
    und Bibliothekare, 2013, pp. 559–87.
  short: P. Danowski, D. Goldfarb, V. Schaffner, W. Seidler, VÖB Mitteilungen 66 (2013)
    559–587.
date_created: 2018-12-11T11:56:36Z
date_published: 2013-12-01T00:00:00Z
date_updated: 2021-01-12T06:56:20Z
day: '01'
ddc:
- '020'
department:
- _id: E-Lib
file:
- access_level: open_access
  checksum: ae57ffcee3720adcc27b0f2767a1e04b
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:08:09Z
  date_updated: 2020-07-14T12:45:35Z
  file_id: '4669'
  file_name: IST-2016-719-v1+1_Patrick_Danowski__Doron_Goldfarb__Verena_Schaffner__Wolfram_Seidler_Linked__Open__Data_Bibliographische_Daten_im_Semantic_Web.pdf
  file_size: 881545
  relation: main_file
file_date_updated: 2020-07-14T12:45:35Z
has_accepted_license: '1'
intvolume: '        66'
issue: 3/4
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
page: 559 - 587
popular_science: '1'
publication: VÖB Mitteilungen
publication_status: published
publisher: Verein Österreichischer Bibliothekarinnen und Bibliothekare
publist_id: '4690'
pubrep_id: '719'
status: public
title: Linked (Open) Data - Bibliographische Daten im Semantic Web
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 66
year: '2013'
...
---
_id: '2258'
abstract:
- lang: eng
  text: "In a digital signature scheme with message recovery, rather than transmitting
    the message m and its signature σ, a single enhanced signature τ is transmitted.
    The verifier is able to recover m from τ and at the same time verify its authenticity.
    The two most important parameters of such a scheme are its security and overhead
    |τ| − |m|. A simple argument shows that for any scheme with “n bits security”
    |τ| − |m| ≥ n, i.e., the overhead is lower bounded by the security parameter n.
    Currently, the best known constructions in the random oracle model are far from
    this lower bound requiring an overhead of n + logq h , where q h is the number
    of queries to the random oracle. In this paper we give a construction which basically
    matches the n bit lower bound. We propose a simple digital signature scheme with
    n + o(logq h ) bits overhead, where q h denotes the number of random oracle queries.\r\n\r\nOur
    construction works in two steps. First, we propose a signature scheme with message
    recovery having optimal overhead in a new ideal model, the random invertible function
    model. Second, we show that a four-round Feistel network with random oracles as
    round functions is tightly “public-indifferentiable” from a random invertible
    function. At the core of our indifferentiability proof is an almost tight upper
    bound for the expected number of edges of the densest “small” subgraph of a random
    Cayley graph, which may be of independent interest.\r\n"
alternative_title:
- LNCS
author:
- first_name: Eike
  full_name: Kiltz, Eike
  last_name: Kiltz
- first_name: Krzysztof Z
  full_name: Pietrzak, Krzysztof Z
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
- first_name: Mario
  full_name: Szegedy, Mario
  last_name: Szegedy
citation:
  ama: Kiltz E, Pietrzak KZ, Szegedy M. Digital signatures with minimal overhead from
    indifferentiable random invertible functions. 2013;8042:571-588. doi:<a href="https://doi.org/10.1007/978-3-642-40041-4_31">10.1007/978-3-642-40041-4_31</a>
  apa: 'Kiltz, E., Pietrzak, K. Z., &#38; Szegedy, M. (2013). Digital signatures with
    minimal overhead from indifferentiable random invertible functions. Presented
    at the CRYPTO: International Cryptology Conference, Santa Barbara, CA, United
    States: Springer. <a href="https://doi.org/10.1007/978-3-642-40041-4_31">https://doi.org/10.1007/978-3-642-40041-4_31</a>'
  chicago: Kiltz, Eike, Krzysztof Z Pietrzak, and Mario Szegedy. “Digital Signatures
    with Minimal Overhead from Indifferentiable Random Invertible Functions.” Lecture
    Notes in Computer Science. Springer, 2013. <a href="https://doi.org/10.1007/978-3-642-40041-4_31">https://doi.org/10.1007/978-3-642-40041-4_31</a>.
  ieee: E. Kiltz, K. Z. Pietrzak, and M. Szegedy, “Digital signatures with minimal
    overhead from indifferentiable random invertible functions,” vol. 8042. Springer,
    pp. 571–588, 2013.
  ista: Kiltz E, Pietrzak KZ, Szegedy M. 2013. Digital signatures with minimal overhead
    from indifferentiable random invertible functions. 8042, 571–588.
  mla: Kiltz, Eike, et al. <i>Digital Signatures with Minimal Overhead from Indifferentiable
    Random Invertible Functions</i>. Vol. 8042, Springer, 2013, pp. 571–88, doi:<a
    href="https://doi.org/10.1007/978-3-642-40041-4_31">10.1007/978-3-642-40041-4_31</a>.
  short: E. Kiltz, K.Z. Pietrzak, M. Szegedy, 8042 (2013) 571–588.
conference:
  end_date: 2013-08-22
  location: Santa Barbara, CA, United States
  name: 'CRYPTO: International Cryptology Conference'
  start_date: 2013-08-18
date_created: 2018-12-11T11:56:37Z
date_published: 2013-01-01T00:00:00Z
date_updated: 2021-01-12T06:56:21Z
day: '01'
ddc:
- '000'
- '004'
department:
- _id: KrPi
doi: 10.1007/978-3-642-40041-4_31
ec_funded: 1
file:
- access_level: open_access
  checksum: 18a3f602cb41de184dc0e16a0e907633
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:09:20Z
  date_updated: 2020-07-14T12:45:35Z
  file_id: '4744'
  file_name: IST-2016-685-v1+1_658.pdf
  file_size: 493175
  relation: main_file
file_date_updated: 2020-07-14T12:45:35Z
has_accepted_license: '1'
intvolume: '      8042'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Submitted Version
page: 571 - 588
project:
- _id: 258C570E-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '259668'
  name: Provable Security for Physical Cryptography
publication_status: published
publisher: Springer
publist_id: '4688'
pubrep_id: '685'
quality_controlled: '1'
scopus_import: 1
series_title: Lecture Notes in Computer Science
status: public
title: Digital signatures with minimal overhead from indifferentiable random invertible
  functions
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8042
year: '2013'
...
---
_id: '2259'
abstract:
- lang: eng
  text: "The learning with rounding (LWR) problem, introduced by Banerjee, Peikert
    and Rosen at EUROCRYPT ’12, is a variant of learning with errors (LWE), where
    one replaces random errors with deterministic rounding. The LWR problem was shown
    to be as hard as LWE for a setting of parameters where the modulus and modulus-to-error
    ratio are super-polynomial. In this work we resolve the main open problem and
    give a new reduction that works for a larger range of parameters, allowing for
    a polynomial modulus and modulus-to-error ratio. In particular, a smaller modulus
    gives us greater efficiency, and a smaller modulus-to-error ratio gives us greater
    security, which now follows from the worst-case hardness of GapSVP with polynomial
    (rather than super-polynomial) approximation factors.\r\n\r\nAs a tool in the
    reduction, we show that there is a “lossy mode” for the LWR problem, in which
    LWR samples only reveal partial information about the secret. This property gives
    us several interesting new applications, including a proof that LWR remains secure
    with weakly random secrets of sufficient min-entropy, and very simple constructions
    of deterministic encryption, lossy trapdoor functions and reusable extractors.\r\n\r\nOur
    approach is inspired by a technique of Goldwasser et al. from ICS ’10, which implicitly
    showed the existence of a “lossy mode” for LWE. By refining this technique, we
    also improve on the parameters of that work to only requiring a polynomial (instead
    of super-polynomial) modulus and modulus-to-error ratio.\r\n"
alternative_title:
- LNCS
author:
- first_name: Joel F
  full_name: Alwen, Joel F
  id: 2A8DFA8C-F248-11E8-B48F-1D18A9856A87
  last_name: Alwen
- first_name: Stephan
  full_name: Krenn, Stephan
  id: 329FCCF0-F248-11E8-B48F-1D18A9856A87
  last_name: Krenn
  orcid: 0000-0003-2835-9093
- first_name: Krzysztof Z
  full_name: Pietrzak, Krzysztof Z
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
- first_name: Daniel
  full_name: Wichs, Daniel
  last_name: Wichs
citation:
  ama: 'Alwen JF, Krenn S, Pietrzak KZ, Wichs D. Learning with rounding, revisited:
    New reduction properties and applications. 2013;8042(1):57-74. doi:<a href="https://doi.org/10.1007/978-3-642-40041-4_4">10.1007/978-3-642-40041-4_4</a>'
  apa: 'Alwen, J. F., Krenn, S., Pietrzak, K. Z., &#38; Wichs, D. (2013). Learning
    with rounding, revisited: New reduction properties and applications. Presented
    at the CRYPTO: International Cryptology Conference, Santa Barbara, CA, United
    States: Springer. <a href="https://doi.org/10.1007/978-3-642-40041-4_4">https://doi.org/10.1007/978-3-642-40041-4_4</a>'
  chicago: 'Alwen, Joel F, Stephan Krenn, Krzysztof Z Pietrzak, and Daniel Wichs.
    “Learning with Rounding, Revisited: New Reduction Properties and Applications.”
    Lecture Notes in Computer Science. Springer, 2013. <a href="https://doi.org/10.1007/978-3-642-40041-4_4">https://doi.org/10.1007/978-3-642-40041-4_4</a>.'
  ieee: 'J. F. Alwen, S. Krenn, K. Z. Pietrzak, and D. Wichs, “Learning with rounding,
    revisited: New reduction properties and applications,” vol. 8042, no. 1. Springer,
    pp. 57–74, 2013.'
  ista: 'Alwen JF, Krenn S, Pietrzak KZ, Wichs D. 2013. Learning with rounding, revisited:
    New reduction properties and applications. 8042(1), 57–74.'
  mla: 'Alwen, Joel F., et al. <i>Learning with Rounding, Revisited: New Reduction
    Properties and Applications</i>. Vol. 8042, no. 1, Springer, 2013, pp. 57–74,
    doi:<a href="https://doi.org/10.1007/978-3-642-40041-4_4">10.1007/978-3-642-40041-4_4</a>.'
  short: J.F. Alwen, S. Krenn, K.Z. Pietrzak, D. Wichs, 8042 (2013) 57–74.
conference:
  end_date: 2013-08-22
  location: Santa Barbara, CA, United States
  name: 'CRYPTO: International Cryptology Conference'
  start_date: 2013-08-18
date_created: 2018-12-11T11:56:37Z
date_published: 2013-01-01T00:00:00Z
date_updated: 2021-01-12T06:56:21Z
day: '01'
ddc:
- '000'
- '004'
department:
- _id: KrPi
doi: 10.1007/978-3-642-40041-4_4
ec_funded: 1
file:
- access_level: open_access
  checksum: 16d428408a806b8e49eecc607deab115
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:11:55Z
  date_updated: 2020-07-14T12:45:35Z
  file_id: '4912'
  file_name: IST-2016-684-v1+1_098.pdf
  file_size: 587898
  relation: main_file
file_date_updated: 2020-07-14T12:45:35Z
has_accepted_license: '1'
intvolume: '      8042'
issue: '1'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
page: 57 - 74
project:
- _id: 258C570E-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '259668'
  name: Provable Security for Physical Cryptography
publication_status: published
publisher: Springer
publist_id: '4687'
pubrep_id: '684'
quality_controlled: '1'
scopus_import: 1
series_title: Lecture Notes in Computer Science
status: public
title: 'Learning with rounding, revisited: New reduction properties and applications'
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8042
year: '2013'
...
