---
_id: '12168'
abstract:
- lang: eng
text: "Advances in blockchains have influenced the State-Machine-Replication (SMR)
world and many state-of-the-art blockchain-SMR solutions are based on two pillars:
Chaining and Leader-rotation. A predetermined round-robin mechanism used for Leader-rotation,
however, has an undesirable behavior: crashed parties become designated leaders
infinitely often, slowing down overall system performance. In this paper, we provide
a new Leader-Aware SMR framework that, among other desirable properties, formalizes
a Leader-utilization requirement that bounds the number of rounds whose leaders
are faulty in crash-only executions.\r\nWe introduce Carousel, a novel, reputation-based
Leader-rotation solution to achieve Leader-Aware SMR. The challenge in adaptive
Leader-rotation is that it cannot rely on consensus to determine a leader, since
consensus itself needs a leader. Carousel uses the available on-chain information
to determine a leader locally and achieves Liveness despite this difficulty. A
HotStuff implementation fitted with Carousel demonstrates drastic performance
improvements: it increases throughput over 2x in faultless settings and provided
a 20x throughput increase and 5x latency reduction in the presence of faults."
alternative_title:
- LNCS
article_processing_charge: No
arxiv: 1
author:
- first_name: Shir
full_name: Cohen, Shir
last_name: Cohen
- first_name: Rati
full_name: Gelashvili, Rati
last_name: Gelashvili
- first_name: Eleftherios
full_name: Kokoris Kogias, Eleftherios
id: f5983044-d7ef-11ea-ac6d-fd1430a26d30
last_name: Kokoris Kogias
- first_name: Zekun
full_name: Li, Zekun
last_name: Li
- first_name: Dahlia
full_name: Malkhi, Dahlia
last_name: Malkhi
- first_name: Alberto
full_name: Sonnino, Alberto
last_name: Sonnino
- first_name: Alexander
full_name: Spiegelman, Alexander
last_name: Spiegelman
citation:
ama: 'Cohen S, Gelashvili R, Kokoris Kogias E, et al. Be aware of your leaders.
In: International Conference on Financial Cryptography and Data Security.
Vol 13411. Springer Nature; 2022:279-295. doi:10.1007/978-3-031-18283-9_13'
apa: 'Cohen, S., Gelashvili, R., Kokoris Kogias, E., Li, Z., Malkhi, D., Sonnino,
A., & Spiegelman, A. (2022). Be aware of your leaders. In International
Conference on Financial Cryptography and Data Security (Vol. 13411, pp. 279–295).
Grenada: Springer Nature. https://doi.org/10.1007/978-3-031-18283-9_13'
chicago: Cohen, Shir, Rati Gelashvili, Eleftherios Kokoris Kogias, Zekun Li, Dahlia
Malkhi, Alberto Sonnino, and Alexander Spiegelman. “Be Aware of Your Leaders.”
In International Conference on Financial Cryptography and Data Security,
13411:279–95. Springer Nature, 2022. https://doi.org/10.1007/978-3-031-18283-9_13.
ieee: S. Cohen et al., “Be aware of your leaders,” in International Conference
on Financial Cryptography and Data Security, Grenada, 2022, vol. 13411, pp.
279–295.
ista: 'Cohen S, Gelashvili R, Kokoris Kogias E, Li Z, Malkhi D, Sonnino A, Spiegelman
A. 2022. Be aware of your leaders. International Conference on Financial Cryptography
and Data Security. FC: Financial Cryptography and Data Security, LNCS, vol. 13411,
279–295.'
mla: Cohen, Shir, et al. “Be Aware of Your Leaders.” International Conference
on Financial Cryptography and Data Security, vol. 13411, Springer Nature,
2022, pp. 279–95, doi:10.1007/978-3-031-18283-9_13.
short: S. Cohen, R. Gelashvili, E. Kokoris Kogias, Z. Li, D. Malkhi, A. Sonnino,
A. Spiegelman, in:, International Conference on Financial Cryptography and Data
Security, Springer Nature, 2022, pp. 279–295.
conference:
end_date: 2022-05-06
location: Grenada
name: 'FC: Financial Cryptography and Data Security'
start_date: 2022-05-02
date_created: 2023-01-12T12:10:49Z
date_published: 2022-10-22T00:00:00Z
date_updated: 2023-09-05T15:11:35Z
day: '22'
department:
- _id: ElKo
doi: 10.1007/978-3-031-18283-9_13
external_id:
arxiv:
- '2110.00960'
intvolume: ' 13411'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.2110.00960
month: '10'
oa: 1
oa_version: Preprint
page: 279-295
publication: International Conference on Financial Cryptography and Data Security
publication_identifier:
eisbn:
- '9783031182839'
eissn:
- 1611-3349
isbn:
- '9783031182822'
issn:
- 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Be aware of your leaders
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 13411
year: '2022'
...
---
_id: '12170'
abstract:
- lang: eng
text: We present PET, a specialized and highly optimized framework for partial exploration
on probabilistic systems. Over the last decade, several significant advances in
the analysis of Markov decision processes employed partial exploration. In a nutshell,
this idea allows to focus computation on specific parts of the system, guided
by heuristics, while maintaining correctness. In particular, only relevant parts
of the system are constructed on demand, which in turn potentially allows to omit
constructing large parts of the system. Depending on the model, this leads to
dramatic speed-ups, in extreme cases even up to an arbitrary factor. PET unifies
several previous implementations and provides a flexible framework to easily implement
partial exploration for many further problems. Our experimental evaluation shows
significant improvements compared to the previous implementations while vastly
reducing the overhead required to add support for additional properties.
acknowledgement: We thank Pranav Ashok and Maximilian Weininger for their contributions
to spiritual predecessors of PET as well as motivating the initial development of
this tool.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Tobias
full_name: Meggendorfer, Tobias
id: b21b0c15-30a2-11eb-80dc-f13ca25802e1
last_name: Meggendorfer
orcid: 0000-0002-1712-2165
citation:
ama: 'Meggendorfer T. PET – A partial exploration tool for probabilistic verification.
In: 20th International Symposium on Automated Technology for Verification and
Analysis. Vol 13505. Springer Nature; 2022:320-326. doi:10.1007/978-3-031-19992-9_20'
apa: 'Meggendorfer, T. (2022). PET – A partial exploration tool for probabilistic
verification. In 20th International Symposium on Automated Technology for Verification
and Analysis (Vol. 13505, pp. 320–326). Virtual: Springer Nature. https://doi.org/10.1007/978-3-031-19992-9_20'
chicago: Meggendorfer, Tobias. “PET – A Partial Exploration Tool for Probabilistic
Verification.” In 20th International Symposium on Automated Technology for
Verification and Analysis, 13505:320–26. Springer Nature, 2022. https://doi.org/10.1007/978-3-031-19992-9_20.
ieee: T. Meggendorfer, “PET – A partial exploration tool for probabilistic verification,”
in 20th International Symposium on Automated Technology for Verification and
Analysis, Virtual, 2022, vol. 13505, pp. 320–326.
ista: 'Meggendorfer T. 2022. PET – A partial exploration tool for probabilistic
verification. 20th International Symposium on Automated Technology for Verification
and Analysis. ATVA: Automated Technology for Verification and Analysis, LNCS,
vol. 13505, 320–326.'
mla: Meggendorfer, Tobias. “PET – A Partial Exploration Tool for Probabilistic Verification.”
20th International Symposium on Automated Technology for Verification and Analysis,
vol. 13505, Springer Nature, 2022, pp. 320–26, doi:10.1007/978-3-031-19992-9_20.
short: T. Meggendorfer, in:, 20th International Symposium on Automated Technology
for Verification and Analysis, Springer Nature, 2022, pp. 320–326.
conference:
end_date: 2022-10-28
location: Virtual
name: 'ATVA: Automated Technology for Verification and Analysis'
start_date: 2022-10-25
date_created: 2023-01-12T12:11:07Z
date_published: 2022-10-21T00:00:00Z
date_updated: 2023-09-05T15:11:51Z
day: '21'
department:
- _id: KrCh
doi: 10.1007/978-3-031-19992-9_20
intvolume: ' 13505'
language:
- iso: eng
month: '10'
oa_version: None
page: 320-326
publication: 20th International Symposium on Automated Technology for Verification
and Analysis
publication_identifier:
eisbn:
- '9783031199929'
eissn:
- 1611-3349
isbn:
- '9783031199912'
issn:
- 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: PET – A partial exploration tool for probabilistic verification
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 13505
year: '2022'
...
---
_id: '12171'
abstract:
- lang: eng
text: 'We propose an algorithmic approach for synthesizing linear hybrid automata
from time-series data. Unlike existing approaches, our approach provides a whole
family of models with the same discrete structure but different dynamics. Each
model in the family is guaranteed to capture the input data up to a precision
error ε, in the following sense: For each time series, the model contains an execution
that is ε-close to the data points. Our construction allows to effectively choose
a model from this family with minimal precision error ε. We demonstrate the algorithm’s
efficiency and its ability to find precise models in two case studies.'
acknowledgement: This work was supported in part by the European Union’s Horizon 2020
research and innovation programme under the Marie Skłodowska-Curie grant agreement
no. 847635, by the ERC-2020-AdG 101020093, by DIREC - Digital Research Centre Denmark,
and by the Villum Investigator Grant S4OS.
alternative_title:
- LNCS
article_processing_charge: No
arxiv: 1
author:
- first_name: Miriam
full_name: Garcia Soto, Miriam
id: 4B3207F6-F248-11E8-B48F-1D18A9856A87
last_name: Garcia Soto
orcid: 0000-0003-2936-5719
- first_name: Thomas A
full_name: Henzinger, Thomas A
id: 40876CD8-F248-11E8-B48F-1D18A9856A87
last_name: Henzinger
orcid: 0000-0002-2985-7724
- first_name: Christian
full_name: Schilling, Christian
id: 3A2F4DCE-F248-11E8-B48F-1D18A9856A87
last_name: Schilling
orcid: 0000-0003-3658-1065
citation:
ama: 'Garcia Soto M, Henzinger TA, Schilling C. Synthesis of parametric hybrid automata
from time series. In: 20th International Symposium on Automated Technology
for Verification and Analysis. Vol 13505. Springer Nature; 2022:337-353. doi:10.1007/978-3-031-19992-9_22'
apa: 'Garcia Soto, M., Henzinger, T. A., & Schilling, C. (2022). Synthesis of parametric
hybrid automata from time series. In 20th International Symposium on Automated
Technology for Verification and Analysis (Vol. 13505, pp. 337–353). Virtual:
Springer Nature. https://doi.org/10.1007/978-3-031-19992-9_22'
chicago: Garcia Soto, Miriam, Thomas A Henzinger, and Christian Schilling. “Synthesis
of Parametric Hybrid Automata from Time Series.” In 20th International Symposium
on Automated Technology for Verification and Analysis, 13505:337–53. Springer
Nature, 2022. https://doi.org/10.1007/978-3-031-19992-9_22.
ieee: M. Garcia Soto, T. A. Henzinger, and C. Schilling, “Synthesis of parametric
hybrid automata from time series,” in 20th International Symposium on Automated
Technology for Verification and Analysis, Virtual, 2022, vol. 13505, pp. 337–353.
ista: 'Garcia Soto M, Henzinger TA, Schilling C. 2022. Synthesis of parametric hybrid
automata from time series. 20th International Symposium on Automated Technology
for Verification and Analysis. ATVA: Automated Technology for Verification and
Analysis, LNCS, vol. 13505, 337–353.'
mla: Garcia Soto, Miriam, et al. “Synthesis of Parametric Hybrid Automata from Time
Series.” 20th International Symposium on Automated Technology for Verification
and Analysis, vol. 13505, Springer Nature, 2022, pp. 337–53, doi:10.1007/978-3-031-19992-9_22.
short: M. Garcia Soto, T.A. Henzinger, C. Schilling, in:, 20th International Symposium
on Automated Technology for Verification and Analysis, Springer Nature, 2022,
pp. 337–353.
conference:
end_date: 2022-10-28
location: Virtual
name: 'ATVA: Automated Technology for Verification and Analysis'
start_date: 2022-10-25
date_created: 2023-01-12T12:11:16Z
date_published: 2022-10-21T00:00:00Z
date_updated: 2023-02-13T09:27:55Z
day: '21'
department:
- _id: ToHe
doi: 10.1007/978-3-031-19992-9_22
ec_funded: 1
external_id:
arxiv:
- '2208.06383'
intvolume: ' 13505'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.2208.06383
month: '10'
oa: 1
oa_version: Preprint
page: 337-353
project:
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
call_identifier: H2020
grant_number: '101020093'
name: Vigilant Algorithmic Monitoring of Software
publication: 20th International Symposium on Automated Technology for Verification
and Analysis
publication_identifier:
eisbn:
- '9783031199929'
eissn:
- 1611-3349
isbn:
- '9783031199912'
issn:
- 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Synthesis of parametric hybrid automata from time series
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 13505
year: '2022'
...
---
_id: '12173'
abstract:
- lang: eng
text: With increasing urbanization and industrialization, the prevalence of inflammatory
bowel diseases (IBDs) has steadily been rising over the past two decades. IBD
involves flares of gastrointestinal (GI) inflammation accompanied by microbiota
perturbations. However, microbial mechanisms that trigger such flares remain elusive.
Here, we analyzed the association of the emerging pathogen atypical enteropathogenic
E. coli (aEPEC) with IBD disease activity. The presence of diarrheagenic E. coli
was assessed in stool samples from 630 IBD patients and 234 age- and sex-matched
controls without GI symptoms. Microbiota was analyzed with 16S ribosomal RNA gene
amplicon sequencing, and 57 clinical aEPEC isolates were subjected to whole-genome
sequencing and in vitro pathogenicity experiments including biofilm formation,
epithelial barrier function and the ability to induce pro-inflammatory signaling.
The presence of aEPEC correlated with laboratory, clinical and endoscopic disease
activity in ulcerative colitis (UC), as well as microbiota dysbiosis. In vitro,
aEPEC strains induce epithelial p21-activated kinases, disrupt the epithelial
barrier and display potent biofilm formation. The effector proteins espV and espG2
distinguish aEPEC cultured from UC and Crohn’s disease patients, respectively.
EspV-positive aEPEC harbor more virulence factors and have a higher pro-inflammatory
potential, which is counteracted by 5-ASA. aEPEC may tip a fragile immune–microbiota
homeostasis and thereby contribute to flares in UC. aEPEC isolates from UC patients
display properties to disrupt the epithelial barrier and to induce pro-inflammatory
signaling in vitro.
acknowledgement: "We would like to acknowledge Anita Krnjic, Christina Gmainer, Marion
Nehr, Helga Mock, and Sena Ecin for technical support in conducting the experiments.\r\nThis
study was supported by the Austrian Science Fund (P 32302) and the Vienna Science
and Technology Fund (LS18- 053; Austrian Science Fund (FWF)) [P 32302]."
article_number: e2143218
article_processing_charge: No
article_type: original
author:
- first_name: Maximilian
full_name: Baumgartner, Maximilian
last_name: Baumgartner
- first_name: Rebecca
full_name: Zirnbauer, Rebecca
last_name: Zirnbauer
- first_name: Sabine
full_name: Schlager, Sabine
last_name: Schlager
- first_name: Daniel
full_name: Mertens, Daniel
last_name: Mertens
- first_name: Nikolaus
full_name: Gasche, Nikolaus
last_name: Gasche
- first_name: Barbara
full_name: Sladek, Barbara
last_name: Sladek
- first_name: Craig
full_name: Herbold, Craig
last_name: Herbold
- first_name: Olga
full_name: Bochkareva, Olga
last_name: Bochkareva
- first_name: Vera
full_name: Emelianenko, Vera
id: 20152b9d-927a-11ed-8107-be36d740812d
last_name: Emelianenko
- first_name: Harald
full_name: Vogelsang, Harald
last_name: Vogelsang
- first_name: Michaela
full_name: Lang, Michaela
last_name: Lang
- first_name: Anton
full_name: Klotz, Anton
last_name: Klotz
- first_name: Birgit
full_name: Moik, Birgit
last_name: Moik
- first_name: Athanasios
full_name: Makristathis, Athanasios
last_name: Makristathis
- first_name: David
full_name: Berry, David
last_name: Berry
- first_name: Stefanie
full_name: Dabsch, Stefanie
last_name: Dabsch
- first_name: Vineeta
full_name: Khare, Vineeta
last_name: Khare
- first_name: Christoph
full_name: Gasche, Christoph
last_name: Gasche
citation:
ama: Baumgartner M, Zirnbauer R, Schlager S, et al. Atypical enteropathogenic E.
coli are associated with disease activity in ulcerative colitis. Gut Microbes.
2022;14(1). doi:10.1080/19490976.2022.2143218
apa: Baumgartner, M., Zirnbauer, R., Schlager, S., Mertens, D., Gasche, N., Sladek,
B., … Gasche, C. (2022). Atypical enteropathogenic E. coli are associated with
disease activity in ulcerative colitis. Gut Microbes. Taylor & Francis.
https://doi.org/10.1080/19490976.2022.2143218
chicago: Baumgartner, Maximilian, Rebecca Zirnbauer, Sabine Schlager, Daniel Mertens,
Nikolaus Gasche, Barbara Sladek, Craig Herbold, et al. “Atypical Enteropathogenic
E. Coli Are Associated with Disease Activity in Ulcerative Colitis.” Gut Microbes.
Taylor & Francis, 2022. https://doi.org/10.1080/19490976.2022.2143218.
ieee: M. Baumgartner et al., “Atypical enteropathogenic E. coli are associated
with disease activity in ulcerative colitis,” Gut Microbes, vol. 14, no.
1. Taylor & Francis, 2022.
ista: Baumgartner M, Zirnbauer R, Schlager S, Mertens D, Gasche N, Sladek B, Herbold
C, Bochkareva O, Emelianenko V, Vogelsang H, Lang M, Klotz A, Moik B, Makristathis
A, Berry D, Dabsch S, Khare V, Gasche C. 2022. Atypical enteropathogenic E. coli
are associated with disease activity in ulcerative colitis. Gut Microbes. 14(1),
e2143218.
mla: Baumgartner, Maximilian, et al. “Atypical Enteropathogenic E. Coli Are Associated
with Disease Activity in Ulcerative Colitis.” Gut Microbes, vol. 14, no.
1, e2143218, Taylor & Francis, 2022, doi:10.1080/19490976.2022.2143218.
short: M. Baumgartner, R. Zirnbauer, S. Schlager, D. Mertens, N. Gasche, B. Sladek,
C. Herbold, O. Bochkareva, V. Emelianenko, H. Vogelsang, M. Lang, A. Klotz, B.
Moik, A. Makristathis, D. Berry, S. Dabsch, V. Khare, C. Gasche, Gut Microbes
14 (2022).
date_created: 2023-01-12T12:11:36Z
date_published: 2022-11-22T00:00:00Z
date_updated: 2023-08-04T09:10:18Z
day: '22'
ddc:
- '570'
department:
- _id: FyKo
doi: 10.1080/19490976.2022.2143218
external_id:
isi:
- '000889180100001'
file:
- access_level: open_access
checksum: ee7681a17ae27645e9b5c1df61c15429
content_type: application/pdf
creator: dernst
date_created: 2023-01-26T10:56:51Z
date_updated: 2023-01-26T10:56:51Z
file_id: '12400'
file_name: 2022_GutMicrobes_Baumgartner.pdf
file_size: 4075251
relation: main_file
success: 1
file_date_updated: 2023-01-26T10:56:51Z
has_accepted_license: '1'
intvolume: ' 14'
isi: 1
issue: '1'
keyword:
- Infectious Diseases
- Microbiology (medical)
- Gastroenterology
- Microbiology
language:
- iso: eng
month: '11'
oa: 1
oa_version: Published Version
publication: Gut Microbes
publication_identifier:
eissn:
- 1949-0984
issn:
- 1949-0976
publication_status: published
publisher: Taylor & Francis
quality_controlled: '1'
scopus_import: '1'
status: public
title: Atypical enteropathogenic E. coli are associated with disease activity in ulcerative
colitis
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 14
year: '2022'
...
---
_id: '12174'
abstract:
- lang: eng
text: "Vacuolar-type H+-ATPase (V-ATPase) is a multimeric complex present in a variety
of cellular membranes that acts as an ATP-dependent proton pump and plays a key
role in pH homeostasis and intracellular signalling pathways. In humans, 22 autosomal
genes encode for a redundant set of subunits allowing the composition of diverse
V-ATPase complexes with specific properties and expression. Sixteen subunits have
been linked to human disease.\r\nHere we describe 26 patients harbouring 20 distinct
pathogenic de novo missense ATP6V1A variants, mainly clustering within the ATP
synthase α/β family-nucleotide-binding domain. At a mean age of 7 years (extremes:
6 weeks, youngest deceased patient to 22 years, oldest patient) clinical pictures
included early lethal encephalopathies with rapidly progressive massive brain
atrophy, severe developmental epileptic encephalopathies and static intellectual
disability with epilepsy. The first clinical manifestation was early hypotonia,
in 70%; 81% developed epilepsy, manifested as developmental epileptic encephalopathies
in 58% of the cohort and with infantile spasms in 62%; 63% of developmental epileptic
encephalopathies failed to achieve any developmental, communicative or motor skills.
Less severe outcomes were observed in 23% of patients who, at a mean age of 10
years and 6 months, exhibited moderate intellectual disability, with independent
walking and variable epilepsy. None of the patients developed communicative language.
Microcephaly (38%) and amelogenesis imperfecta/enamel dysplasia (42%) were additional
clinical features. Brain MRI demonstrated hypomyelination and generalized atrophy
in 68%. Atrophy was progressive in all eight individuals undergoing repeated MRIs.\r\n
\ Fibroblasts of two patients with developmental epileptic
encephalopathies showed decreased LAMP1 expression, Lysotracker staining and increased
organelle pH, consistent with lysosomal impairment and loss of V-ATPase function.
Fibroblasts of two patients with milder disease, exhibited a different phenotype
with increased Lysotracker staining, decreased organelle pH and no significant
modification in LAMP1 expression. Quantification of substrates for lysosomal enzymes
in cellular extracts from four patients revealed discrete accumulation. Transmission
electron microscopy of fibroblasts of four patients with variable severity and
of induced pluripotent stem cell-derived neurons from two patients with developmental
epileptic encephalopathies showed electron-dense inclusions, lipid droplets, osmiophilic
material and lamellated membrane structures resembling phospholipids. Quantitative
assessment in induced pluripotent stem cell-derived neurons identified significantly
smaller lysosomes.\r\nATP6V1A-related encephalopathy represents a new paradigm
among lysosomal disorders. It results from a dysfunctional endo-lysosomal membrane
protein causing altered pH homeostasis. Its pathophysiology implies intracellular
accumulation of substrates whose composition remains unclear, and a combination
of developmental brain abnormalities and neurodegenerative changes established
during prenatal and early postanal development, whose severity is variably determined
by specific pathogenic variants."
acknowledged_ssus:
- _id: EM-Fac
- _id: LifeSc
acknowledgement: "We thank all patients and family members for their participation
in this study. We thank Melanie Pieraks and Eva Reinthaler (Neurolentech, Austria)
for generating the human iPSC lines and\r\nfor performing quality checks. We thank
Vanessa Zheden and Daniel Gütl for their excellent technical support in the specimen
preparation for transmission electron microscopy and Flavia Leite for preparing
the lentiviruses. The support from Electron Microscopy Facility and Molecular Biology
Services at IST Austria is greatly acknowledged. We would like to thank Doctors
Jane Hurst and Richard Scott for their help in retrieving the detailed clinical
information of Patient 17. The research team acknowledges the support of the National
Institute for Health Research, through the Comprehensive Clinical Research Network.
See Supplementary Material for Undiagnosed Disease Network consortium details. Genetic
information on Patient 23 was made available through access to the data and findings
generated by the 100 000 Genomes\r\nProject; www.genomicsengland.co.uk (to K.L.).
\r\nThis work was supported by the EU 7th Framework Programme (FP7) under the project
DESIRE grant N602531 (to R.G.); the Regione Toscana under the Call for Health 2018
(grant\r\nDECODE-EE) (to R.G.); the ‘Brain Project’ by Fondazione Cassa di Risparmio
di Firenze (to R.G.); IRCCS Ospedale Policlinico San Martino 5×1000 and Ricerca
Corrente (to A.F. and F.B.). The European Reference Network (ERN) for rare and complex
epilepsies (EpiCARE) provided financial support for meetings organization. The DDD
study presents independent research commissioned by the Health Innovation Challenge
Fund (grant number HICF-1009-003), a parallel funding partnership between Wellcome
and the Department of Health, and the Wellcome Sanger Institute (grant number WT098051).
The views expressed in this publication\r\nare those of the author(s) and not necessarily
those of Wellcome or the Department of Health. The study has UK Research Ethics
Committee approval (10/H0305/83, granted by the Cambridge South REC, and GEN/284/12
granted by the Republic of Ireland REC). This study makes use of DECIPHER (https://www.deciphergenomics.org),
which is funded by Wellcome. K.K.-S. was supported by the ISTplus fellowship. "
article_processing_charge: No
article_type: original
author:
- first_name: Renzo
full_name: Guerrini, Renzo
last_name: Guerrini
- first_name: Davide
full_name: Mei, Davide
last_name: Mei
- first_name: Margit Katalin
full_name: Szigeti, Margit Katalin
id: 44F4BDC0-F248-11E8-B48F-1D18A9856A87
last_name: Szigeti
orcid: 0000-0001-9500-8758
- first_name: Sara
full_name: Pepe, Sara
last_name: Pepe
- first_name: Mary Kay
full_name: Koenig, Mary Kay
last_name: Koenig
- first_name: Gretchen
full_name: Von Allmen, Gretchen
last_name: Von Allmen
- first_name: Megan T
full_name: Cho, Megan T
last_name: Cho
- first_name: Kimberly
full_name: McDonald, Kimberly
last_name: McDonald
- first_name: Janice
full_name: Baker, Janice
last_name: Baker
- first_name: Vikas
full_name: Bhambhani, Vikas
last_name: Bhambhani
- first_name: Zöe
full_name: Powis, Zöe
last_name: Powis
- first_name: Lance
full_name: Rodan, Lance
last_name: Rodan
- first_name: Rima
full_name: Nabbout, Rima
last_name: Nabbout
- first_name: Giulia
full_name: Barcia, Giulia
last_name: Barcia
- first_name: Jill A
full_name: Rosenfeld, Jill A
last_name: Rosenfeld
- first_name: Carlos A
full_name: Bacino, Carlos A
last_name: Bacino
- first_name: Cyril
full_name: Mignot, Cyril
last_name: Mignot
- first_name: Lillian H
full_name: Power, Lillian H
last_name: Power
- first_name: Catharine J
full_name: Harris, Catharine J
last_name: Harris
- first_name: Dragan
full_name: Marjanovic, Dragan
last_name: Marjanovic
- first_name: Rikke S
full_name: Møller, Rikke S
last_name: Møller
- first_name: Trine B
full_name: Hammer, Trine B
last_name: Hammer
- first_name: Riikka
full_name: Keski Filppula, Riikka
last_name: Keski Filppula
- first_name: Päivi
full_name: Vieira, Päivi
last_name: Vieira
- first_name: Clara
full_name: Hildebrandt, Clara
last_name: Hildebrandt
- first_name: Stephanie
full_name: Sacharow, Stephanie
last_name: Sacharow
- first_name: Luca
full_name: Maragliano, Luca
last_name: Maragliano
- first_name: Fabio
full_name: Benfenati, Fabio
last_name: Benfenati
- first_name: Katherine
full_name: Lachlan, Katherine
last_name: Lachlan
- first_name: Andreas
full_name: Benneche, Andreas
last_name: Benneche
- first_name: Florence
full_name: Petit, Florence
last_name: Petit
- first_name: Jean Madeleine
full_name: de Sainte Agathe, Jean Madeleine
last_name: de Sainte Agathe
- first_name: Barbara
full_name: Hallinan, Barbara
last_name: Hallinan
- first_name: Yue
full_name: Si, Yue
last_name: Si
- first_name: Ingrid M
full_name: Wentzensen, Ingrid M
last_name: Wentzensen
- first_name: Fanggeng
full_name: Zou, Fanggeng
last_name: Zou
- first_name: Vinodh
full_name: Narayanan, Vinodh
last_name: Narayanan
- first_name: Naomichi
full_name: Matsumoto, Naomichi
last_name: Matsumoto
- first_name: Alessandra
full_name: Boncristiano, Alessandra
last_name: Boncristiano
- first_name: Giancarlo
full_name: la Marca, Giancarlo
last_name: la Marca
- first_name: Mitsuhiro
full_name: Kato, Mitsuhiro
last_name: Kato
- first_name: Kristin
full_name: Anderson, Kristin
last_name: Anderson
- first_name: Carmen
full_name: Barba, Carmen
last_name: Barba
- first_name: Luisa
full_name: Sturiale, Luisa
last_name: Sturiale
- first_name: Domenico
full_name: Garozzo, Domenico
last_name: Garozzo
- first_name: Roberto
full_name: Bei, Roberto
last_name: Bei
- first_name: Laura
full_name: Masuelli, Laura
last_name: Masuelli
- first_name: Valerio
full_name: Conti, Valerio
last_name: Conti
- first_name: Gaia
full_name: Novarino, Gaia
id: 3E57A680-F248-11E8-B48F-1D18A9856A87
last_name: Novarino
orcid: 0000-0002-7673-7178
- first_name: Anna
full_name: Fassio, Anna
last_name: Fassio
citation:
ama: 'Guerrini R, Mei D, Szigeti MK, et al. Phenotypic and genetic spectrum of ATP6V1A
encephalopathy: A disorder of lysosomal homeostasis. Brain. 2022;145(8):2687-2703.
doi:10.1093/brain/awac145'
apa: 'Guerrini, R., Mei, D., Szigeti, M. K., Pepe, S., Koenig, M. K., Von Allmen,
G., … Fassio, A. (2022). Phenotypic and genetic spectrum of ATP6V1A encephalopathy:
A disorder of lysosomal homeostasis. Brain. Oxford University Press. https://doi.org/10.1093/brain/awac145'
chicago: 'Guerrini, Renzo, Davide Mei, Margit Katalin Szigeti, Sara Pepe, Mary Kay
Koenig, Gretchen Von Allmen, Megan T Cho, et al. “Phenotypic and Genetic Spectrum
of ATP6V1A Encephalopathy: A Disorder of Lysosomal Homeostasis.” Brain.
Oxford University Press, 2022. https://doi.org/10.1093/brain/awac145.'
ieee: 'R. Guerrini et al., “Phenotypic and genetic spectrum of ATP6V1A encephalopathy:
A disorder of lysosomal homeostasis,” Brain, vol. 145, no. 8. Oxford University
Press, pp. 2687–2703, 2022.'
ista: 'Guerrini R, Mei D, Szigeti MK, Pepe S, Koenig MK, Von Allmen G, Cho MT, McDonald
K, Baker J, Bhambhani V, Powis Z, Rodan L, Nabbout R, Barcia G, Rosenfeld JA,
Bacino CA, Mignot C, Power LH, Harris CJ, Marjanovic D, Møller RS, Hammer TB,
Keski Filppula R, Vieira P, Hildebrandt C, Sacharow S, Maragliano L, Benfenati
F, Lachlan K, Benneche A, Petit F, de Sainte Agathe JM, Hallinan B, Si Y, Wentzensen
IM, Zou F, Narayanan V, Matsumoto N, Boncristiano A, la Marca G, Kato M, Anderson
K, Barba C, Sturiale L, Garozzo D, Bei R, Masuelli L, Conti V, Novarino G, Fassio
A. 2022. Phenotypic and genetic spectrum of ATP6V1A encephalopathy: A disorder
of lysosomal homeostasis. Brain. 145(8), 2687–2703.'
mla: 'Guerrini, Renzo, et al. “Phenotypic and Genetic Spectrum of ATP6V1A Encephalopathy:
A Disorder of Lysosomal Homeostasis.” Brain, vol. 145, no. 8, Oxford University
Press, 2022, pp. 2687–703, doi:10.1093/brain/awac145.'
short: R. Guerrini, D. Mei, M.K. Szigeti, S. Pepe, M.K. Koenig, G. Von Allmen, M.T.
Cho, K. McDonald, J. Baker, V. Bhambhani, Z. Powis, L. Rodan, R. Nabbout, G. Barcia,
J.A. Rosenfeld, C.A. Bacino, C. Mignot, L.H. Power, C.J. Harris, D. Marjanovic,
R.S. Møller, T.B. Hammer, R. Keski Filppula, P. Vieira, C. Hildebrandt, S. Sacharow,
L. Maragliano, F. Benfenati, K. Lachlan, A. Benneche, F. Petit, J.M. de Sainte
Agathe, B. Hallinan, Y. Si, I.M. Wentzensen, F. Zou, V. Narayanan, N. Matsumoto,
A. Boncristiano, G. la Marca, M. Kato, K. Anderson, C. Barba, L. Sturiale, D.
Garozzo, R. Bei, L. Masuelli, V. Conti, G. Novarino, A. Fassio, Brain 145 (2022)
2687–2703.
date_created: 2023-01-12T12:11:45Z
date_published: 2022-08-01T00:00:00Z
date_updated: 2023-08-04T09:13:08Z
day: '01'
department:
- _id: GaNo
doi: 10.1093/brain/awac145
ec_funded: 1
external_id:
isi:
- '000807770000001'
intvolume: ' 145'
isi: 1
issue: '8'
keyword:
- Neurology (clinical)
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1093/brain/awac145
month: '08'
oa: 1
oa_version: Published Version
page: 2687-2703
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '754411'
name: ISTplus - Postdoctoral Fellowships
publication: Brain
publication_identifier:
eissn:
- 1460-2156
issn:
- 0006-8950
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Phenotypic and genetic spectrum of ATP6V1A encephalopathy: A disorder of lysosomal
homeostasis'
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 145
year: '2022'
...
---
_id: '12175'
abstract:
- lang: eng
text: An automaton is history-deterministic (HD) if one can safely resolve its non-deterministic
choices on the fly. In a recent paper, Henzinger, Lehtinen and Totzke studied
this in the context of Timed Automata [9], where it was conjectured that the class
of timed ω-languages recognised by HD-timed automata strictly extends that of
deterministic ones. We provide a proof for this fact.
acknowledgement: This work was supported in part by the ERC-2020-AdG 101020093, the
EPSRC project EP/V025848/1, and the EPSRC project EP/X017796/1.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Sougata
full_name: Bose, Sougata
last_name: Bose
- first_name: Thomas A
full_name: Henzinger, Thomas A
id: 40876CD8-F248-11E8-B48F-1D18A9856A87
last_name: Henzinger
orcid: 0000-0002-2985-7724
- first_name: Karoliina
full_name: Lehtinen, Karoliina
last_name: Lehtinen
- first_name: Sven
full_name: Schewe, Sven
last_name: Schewe
- first_name: Patrick
full_name: Totzke, Patrick
last_name: Totzke
citation:
ama: 'Bose S, Henzinger TA, Lehtinen K, Schewe S, Totzke P. History-deterministic
timed automata are not determinizable. In: 16th International Conference on
Reachability Problems. Vol 13608. Springer Nature; 2022:67-76. doi:10.1007/978-3-031-19135-0_5'
apa: 'Bose, S., Henzinger, T. A., Lehtinen, K., Schewe, S., & Totzke, P. (2022).
History-deterministic timed automata are not determinizable. In 16th International
Conference on Reachability Problems (Vol. 13608, pp. 67–76). Kaiserslautern,
Germany: Springer Nature. https://doi.org/10.1007/978-3-031-19135-0_5'
chicago: Bose, Sougata, Thomas A Henzinger, Karoliina Lehtinen, Sven Schewe, and
Patrick Totzke. “History-Deterministic Timed Automata Are Not Determinizable.”
In 16th International Conference on Reachability Problems, 13608:67–76.
Springer Nature, 2022. https://doi.org/10.1007/978-3-031-19135-0_5.
ieee: S. Bose, T. A. Henzinger, K. Lehtinen, S. Schewe, and P. Totzke, “History-deterministic
timed automata are not determinizable,” in 16th International Conference on
Reachability Problems, Kaiserslautern, Germany, 2022, vol. 13608, pp. 67–76.
ista: 'Bose S, Henzinger TA, Lehtinen K, Schewe S, Totzke P. 2022. History-deterministic
timed automata are not determinizable. 16th International Conference on Reachability
Problems. RC: Reachability Problems, LNCS, vol. 13608, 67–76.'
mla: Bose, Sougata, et al. “History-Deterministic Timed Automata Are Not Determinizable.”
16th International Conference on Reachability Problems, vol. 13608, Springer
Nature, 2022, pp. 67–76, doi:10.1007/978-3-031-19135-0_5.
short: S. Bose, T.A. Henzinger, K. Lehtinen, S. Schewe, P. Totzke, in:, 16th International
Conference on Reachability Problems, Springer Nature, 2022, pp. 67–76.
conference:
end_date: 2022-10-21
location: Kaiserslautern, Germany
name: 'RC: Reachability Problems'
start_date: 2022-10-17
date_created: 2023-01-12T12:11:57Z
date_published: 2022-10-12T00:00:00Z
date_updated: 2023-09-05T15:12:08Z
day: '12'
department:
- _id: ToHe
doi: 10.1007/978-3-031-19135-0_5
ec_funded: 1
intvolume: ' 13608'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://hal.science/hal-03849398/
month: '10'
oa: 1
oa_version: Preprint
page: 67-76
project:
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
call_identifier: H2020
grant_number: '101020093'
name: Vigilant Algorithmic Monitoring of Software
publication: 16th International Conference on Reachability Problems
publication_identifier:
eisbn:
- '9783031191350'
eissn:
- 1611-3349
isbn:
- '9783031191343'
issn:
- 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: History-deterministic timed automata are not determinizable
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 13608
year: '2022'
...
---
_id: '12176'
abstract:
- lang: eng
text: "A proof of exponentiation (PoE) in a group G of unknown order allows a prover
to convince a verifier that a tuple (x,q,T,y)∈G×N×N×G satisfies xqT=y. This primitive
has recently found exciting applications in the constructions of verifiable delay
functions and succinct arguments of knowledge. The most practical PoEs only achieve
soundness either under computational assumptions, i.e., they are arguments (Wesolowski,
Journal of Cryptology 2020), or in groups that come with the promise of not having
any small subgroups (Pietrzak, ITCS 2019). The only statistically-sound PoE in
general groups of unknown order is due to Block et al. (CRYPTO 2021), and can
be seen as an elaborate parallel repetition of Pietrzak’s PoE: to achieve λ bits
of security, say λ=80, the number of repetitions required (and thus the blow-up
in communication) is as large as λ.\r\n\r\nIn this work, we propose a statistically-sound
PoE for the case where the exponent q is the product of all primes up to some
bound B. We show that, in this case, it suffices to run only λ/log(B) parallel
instances of Pietrzak’s PoE, which reduces the concrete proof-size compared to
Block et al. by an order of magnitude. Furthermore, we show that in the known
applications where PoEs are used as a building block such structured exponents
are viable. Finally, we also discuss batching of our PoE, showing that many proofs
(for the same G and q but different x and T) can be batched by adding only a single
element to the proof per additional statement."
acknowledgement: "We would like to thank the authors of [BHR+21] for clarifying several
questions we had\r\nregarding their results. Pavel Hubá£ek was supported by the
Grant Agency of the Czech\r\nRepublic under the grant agreement no. 19-27871X and
by the Charles University project\r\nUNCE/SCI/004. Chethan Kamath is supported by
Azrieli International Postdoctoral Fellowship\r\nand ISF grants 484/18 and 1789/19.
Karen Klein was supported in part by ERC CoG grant\r\n724307 and conducted part
of this work at Institute of Science and Technology Austria."
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Charlotte
full_name: Hoffmann, Charlotte
id: 0f78d746-dc7d-11ea-9b2f-83f92091afe7
last_name: Hoffmann
orcid: 0000-0003-2027-5549
- first_name: Pavel
full_name: Hubáček, Pavel
last_name: Hubáček
- first_name: Chethan
full_name: Kamath, Chethan
last_name: Kamath
- first_name: Karen
full_name: Klein, Karen
last_name: Klein
- first_name: Krzysztof Z
full_name: Pietrzak, Krzysztof Z
id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
last_name: Pietrzak
orcid: 0000-0002-9139-1654
citation:
ama: 'Hoffmann C, Hubáček P, Kamath C, Klein K, Pietrzak KZ. Practical statistically-sound
proofs of exponentiation in any group. In: Advances in Cryptology – CRYPTO
2022. Vol 13508. Springer Nature; 2022:370-399. doi:10.1007/978-3-031-15979-4_13'
apa: 'Hoffmann, C., Hubáček, P., Kamath, C., Klein, K., & Pietrzak, K. Z. (2022).
Practical statistically-sound proofs of exponentiation in any group. In Advances
in Cryptology – CRYPTO 2022 (Vol. 13508, pp. 370–399). Santa Barbara, CA,
United States: Springer Nature. https://doi.org/10.1007/978-3-031-15979-4_13'
chicago: Hoffmann, Charlotte, Pavel Hubáček, Chethan Kamath, Karen Klein, and Krzysztof
Z Pietrzak. “Practical Statistically-Sound Proofs of Exponentiation in Any Group.”
In Advances in Cryptology – CRYPTO 2022, 13508:370–99. Springer Nature,
2022. https://doi.org/10.1007/978-3-031-15979-4_13.
ieee: C. Hoffmann, P. Hubáček, C. Kamath, K. Klein, and K. Z. Pietrzak, “Practical
statistically-sound proofs of exponentiation in any group,” in Advances in
Cryptology – CRYPTO 2022, Santa Barbara, CA, United States, 2022, vol. 13508,
pp. 370–399.
ista: 'Hoffmann C, Hubáček P, Kamath C, Klein K, Pietrzak KZ. 2022. Practical statistically-sound
proofs of exponentiation in any group. Advances in Cryptology – CRYPTO 2022. CRYYPTO:
International Cryptology Conference, LNCS, vol. 13508, 370–399.'
mla: Hoffmann, Charlotte, et al. “Practical Statistically-Sound Proofs of Exponentiation
in Any Group.” Advances in Cryptology – CRYPTO 2022, vol. 13508, Springer
Nature, 2022, pp. 370–99, doi:10.1007/978-3-031-15979-4_13.
short: C. Hoffmann, P. Hubáček, C. Kamath, K. Klein, K.Z. Pietrzak, in:, Advances
in Cryptology – CRYPTO 2022, Springer Nature, 2022, pp. 370–399.
conference:
end_date: 2022-08-18
location: Santa Barbara, CA, United States
name: 'CRYYPTO: International Cryptology Conference'
start_date: 2022-08-15
date_created: 2023-01-12T12:12:07Z
date_published: 2022-10-13T00:00:00Z
date_updated: 2023-09-05T15:12:27Z
day: '13'
department:
- _id: KrPi
doi: 10.1007/978-3-031-15979-4_13
external_id:
isi:
- '000886792700013'
intvolume: ' 13508'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://eprint.iacr.org/2022/1021
month: '10'
oa: 1
oa_version: Preprint
page: 370-399
publication: Advances in Cryptology – CRYPTO 2022
publication_identifier:
eisbn:
- '9783031159794'
eissn:
- 1611-3349
isbn:
- '9783031159787'
issn:
- 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Practical statistically-sound proofs of exponentiation in any group
type: conference
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 13508
year: '2022'
...
---
_id: '12177'
abstract:
- lang: eng
text: Using elementary hyperbolic geometry, we give an explicit formula for the
contraction constant of the skinning map over moduli spaces of relatively acylindrical
hyperbolic manifolds.
acknowledgement: "The first author was partially supported by the National Science
Foundation under Grant\r\nNo. DMS-1928930 while participating in a program hosted
by the Mathematical Sciences Research Institute in Berkeley, California, during
the Fall 2020 semester. The second author gratefully acknowledges funding by the
Austrian Science Fund (FWF) through grants F65 and ESPRIT 208, by the European Research
Council (ERC, grant No. 716117, awarded to Prof. Dr. Jan Maas), and by the Deutsche
Forschungsgemeinschaft through the SPP 2265."
article_processing_charge: No
article_type: original
author:
- first_name: Tommaso
full_name: Cremaschi, Tommaso
last_name: Cremaschi
- first_name: Lorenzo
full_name: Dello Schiavo, Lorenzo
id: ECEBF480-9E4F-11EA-B557-B0823DDC885E
last_name: Dello Schiavo
orcid: 0000-0002-9881-6870
citation:
ama: Cremaschi T, Dello Schiavo L. Effective contraction of Skinning maps. Proceedings
of the American Mathematical Society, Series B. 2022;9(43):445-459. doi:10.1090/bproc/134
apa: Cremaschi, T., & Dello Schiavo, L. (2022). Effective contraction of Skinning
maps. Proceedings of the American Mathematical Society, Series B. American
Mathematical Society. https://doi.org/10.1090/bproc/134
chicago: Cremaschi, Tommaso, and Lorenzo Dello Schiavo. “Effective Contraction of
Skinning Maps.” Proceedings of the American Mathematical Society, Series B.
American Mathematical Society, 2022. https://doi.org/10.1090/bproc/134.
ieee: T. Cremaschi and L. Dello Schiavo, “Effective contraction of Skinning maps,”
Proceedings of the American Mathematical Society, Series B, vol. 9, no.
43. American Mathematical Society, pp. 445–459, 2022.
ista: Cremaschi T, Dello Schiavo L. 2022. Effective contraction of Skinning maps.
Proceedings of the American Mathematical Society, Series B. 9(43), 445–459.
mla: Cremaschi, Tommaso, and Lorenzo Dello Schiavo. “Effective Contraction of Skinning
Maps.” Proceedings of the American Mathematical Society, Series B, vol.
9, no. 43, American Mathematical Society, 2022, pp. 445–59, doi:10.1090/bproc/134.
short: T. Cremaschi, L. Dello Schiavo, Proceedings of the American Mathematical
Society, Series B 9 (2022) 445–459.
date_created: 2023-01-12T12:12:17Z
date_published: 2022-11-02T00:00:00Z
date_updated: 2023-01-26T13:04:13Z
day: '02'
ddc:
- '510'
department:
- _id: JaMa
doi: 10.1090/bproc/134
ec_funded: 1
file:
- access_level: open_access
checksum: cb4a79937c1f60d4c329a10ee797f0d2
content_type: application/pdf
creator: dernst
date_created: 2023-01-26T13:02:07Z
date_updated: 2023-01-26T13:02:07Z
file_id: '12404'
file_name: 2022_ProceedingsAMS_Cremaschi.pdf
file_size: 326471
relation: main_file
success: 1
file_date_updated: 2023-01-26T13:02:07Z
has_accepted_license: '1'
intvolume: ' 9'
issue: '43'
language:
- iso: eng
month: '11'
oa: 1
oa_version: Published Version
page: 445-459
project:
- _id: fc31cba2-9c52-11eb-aca3-ff467d239cd2
grant_number: F6504
name: Taming Complexity in Partial Differential Systems
- _id: 256E75B8-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '716117'
name: Optimal Transport and Stochastic Dynamics
publication: Proceedings of the American Mathematical Society, Series B
publication_identifier:
issn:
- 2330-1511
publication_status: published
publisher: American Mathematical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Effective contraction of Skinning maps
tmp:
image: /images/cc_by_nc_nd.png
legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
(CC BY-NC-ND 4.0)
short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 9
year: '2022'
...
---
_id: '12178'
abstract:
- lang: eng
text: In this paper we consider the stochastic primitive equation for geophysical
flows subject to transport noise and turbulent pressure. Admitting very rough
noise terms, the global existence and uniqueness of solutions to this stochastic
partial differential equation are proven using stochastic maximal L² regularity,
the theory of critical spaces for stochastic evolution equations, and global a
priori bounds. Compared to other results in this direction, we do not need any
smallness assumption on the transport noise which acts directly on the velocity
field and we also allow rougher noise terms. The adaptation to Stratonovich type
noise and, more generally, to variable viscosity and/or conductivity are discussed
as well.
acknowledgement: The authors thank the anonymous referees for their helpful comments
and suggestions. Open Access funding enabled and organized by Projekt DEAL.
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Antonio
full_name: Agresti, Antonio
id: 673cd0cc-9b9a-11eb-b144-88f30e1fbb72
last_name: Agresti
orcid: 0000-0002-9573-2962
- first_name: Matthias
full_name: Hieber, Matthias
last_name: Hieber
- first_name: Amru
full_name: Hussein, Amru
last_name: Hussein
- first_name: Martin
full_name: Saal, Martin
last_name: Saal
citation:
ama: 'Agresti A, Hieber M, Hussein A, Saal M. The stochastic primitive equations
with transport noise and turbulent pressure. Stochastics and Partial Differential
Equations: Analysis and Computations. 2022. doi:10.1007/s40072-022-00277-3'
apa: 'Agresti, A., Hieber, M., Hussein, A., & Saal, M. (2022). The stochastic
primitive equations with transport noise and turbulent pressure. Stochastics
and Partial Differential Equations: Analysis and Computations. Springer Nature.
https://doi.org/10.1007/s40072-022-00277-3'
chicago: 'Agresti, Antonio, Matthias Hieber, Amru Hussein, and Martin Saal. “The
Stochastic Primitive Equations with Transport Noise and Turbulent Pressure.” Stochastics
and Partial Differential Equations: Analysis and Computations. Springer Nature,
2022. https://doi.org/10.1007/s40072-022-00277-3.'
ieee: 'A. Agresti, M. Hieber, A. Hussein, and M. Saal, “The stochastic primitive
equations with transport noise and turbulent pressure,” Stochastics and Partial
Differential Equations: Analysis and Computations. Springer Nature, 2022.'
ista: 'Agresti A, Hieber M, Hussein A, Saal M. 2022. The stochastic primitive equations
with transport noise and turbulent pressure. Stochastics and Partial Differential
Equations: Analysis and Computations.'
mla: 'Agresti, Antonio, et al. “The Stochastic Primitive Equations with Transport
Noise and Turbulent Pressure.” Stochastics and Partial Differential Equations:
Analysis and Computations, Springer Nature, 2022, doi:10.1007/s40072-022-00277-3.'
short: 'A. Agresti, M. Hieber, A. Hussein, M. Saal, Stochastics and Partial Differential
Equations: Analysis and Computations (2022).'
date_created: 2023-01-12T12:12:29Z
date_published: 2022-10-27T00:00:00Z
date_updated: 2023-08-16T09:11:38Z
day: '27'
department:
- _id: JuFi
doi: 10.1007/s40072-022-00277-3
external_id:
isi:
- '000874389000001'
isi: 1
keyword:
- Applied Mathematics
- Modeling and Simulation
- Statistics and Probability
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1007/s40072-022-00277-3
month: '10'
oa: 1
oa_version: Published Version
publication: 'Stochastics and Partial Differential Equations: Analysis and Computations'
publication_identifier:
eissn:
- 2194-041X
issn:
- 2194-0401
publication_status: epub_ahead
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: The stochastic primitive equations with transport noise and turbulent pressure
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '12179'
abstract:
- lang: eng
text: We derive an accurate lower tail estimate on the lowest singular value σ1(X−z)
of a real Gaussian (Ginibre) random matrix X shifted by a complex parameter z.
Such shift effectively changes the upper tail behavior of the condition number
κ(X−z) from the slower (κ(X−z)≥t)≲1/t decay typical for real Ginibre matrices
to the faster 1/t2 decay seen for complex Ginibre matrices as long as z is away
from the real axis. This sharpens and resolves a recent conjecture in [J. Banks
et al., https://arxiv.org/abs/2005.08930, 2020] on the regularizing effect of
the real Ginibre ensemble with a genuinely complex shift. As a consequence we
obtain an improved upper bound on the eigenvalue condition numbers (known also
as the eigenvector overlaps) for real Ginibre matrices. The main technical tool
is a rigorous supersymmetric analysis from our earlier work [Probab. Math. Phys.,
1 (2020), pp. 101--146].
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Giorgio
full_name: Cipolloni, Giorgio
id: 42198EFA-F248-11E8-B48F-1D18A9856A87
last_name: Cipolloni
orcid: 0000-0002-4901-7992
- first_name: László
full_name: Erdös, László
id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
last_name: Erdös
orcid: 0000-0001-5366-9603
- first_name: Dominik J
full_name: Schröder, Dominik J
id: 408ED176-F248-11E8-B48F-1D18A9856A87
last_name: Schröder
orcid: 0000-0002-2904-1856
citation:
ama: Cipolloni G, Erdös L, Schröder DJ. On the condition number of the shifted real
Ginibre ensemble. SIAM Journal on Matrix Analysis and Applications. 2022;43(3):1469-1487.
doi:10.1137/21m1424408
apa: Cipolloni, G., Erdös, L., & Schröder, D. J. (2022). On the condition number
of the shifted real Ginibre ensemble. SIAM Journal on Matrix Analysis and Applications.
Society for Industrial and Applied Mathematics. https://doi.org/10.1137/21m1424408
chicago: Cipolloni, Giorgio, László Erdös, and Dominik J Schröder. “On the Condition
Number of the Shifted Real Ginibre Ensemble.” SIAM Journal on Matrix Analysis
and Applications. Society for Industrial and Applied Mathematics, 2022. https://doi.org/10.1137/21m1424408.
ieee: G. Cipolloni, L. Erdös, and D. J. Schröder, “On the condition number of the
shifted real Ginibre ensemble,” SIAM Journal on Matrix Analysis and Applications,
vol. 43, no. 3. Society for Industrial and Applied Mathematics, pp. 1469–1487,
2022.
ista: Cipolloni G, Erdös L, Schröder DJ. 2022. On the condition number of the shifted
real Ginibre ensemble. SIAM Journal on Matrix Analysis and Applications. 43(3),
1469–1487.
mla: Cipolloni, Giorgio, et al. “On the Condition Number of the Shifted Real Ginibre
Ensemble.” SIAM Journal on Matrix Analysis and Applications, vol. 43, no.
3, Society for Industrial and Applied Mathematics, 2022, pp. 1469–87, doi:10.1137/21m1424408.
short: G. Cipolloni, L. Erdös, D.J. Schröder, SIAM Journal on Matrix Analysis and
Applications 43 (2022) 1469–1487.
date_created: 2023-01-12T12:12:38Z
date_published: 2022-07-01T00:00:00Z
date_updated: 2023-01-27T06:56:06Z
day: '01'
department:
- _id: LaEr
doi: 10.1137/21m1424408
external_id:
arxiv:
- '2105.13719'
intvolume: ' 43'
issue: '3'
keyword:
- Analysis
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.2105.13719
month: '07'
oa: 1
oa_version: Preprint
page: 1469-1487
publication: SIAM Journal on Matrix Analysis and Applications
publication_identifier:
eissn:
- 1095-7162
issn:
- 0895-4798
publication_status: published
publisher: Society for Industrial and Applied Mathematics
quality_controlled: '1'
scopus_import: '1'
status: public
title: On the condition number of the shifted real Ginibre ensemble
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 43
year: '2022'
...
---
_id: '12182'
abstract:
- lang: eng
text: 'Online algorithms make decisions based on past inputs, with the goal of being
competitive against an algorithm that sees also future inputs. In this work, we
introduce time-local online algorithms; these are online algorithms in which the
output at any given time is a function of only T latest inputs. Our main observation
is that time-local online algorithms are closely connected to local distributed
graph algorithms: distributed algorithms make decisions based on the local information
in the spatial dimension, while time-local online algorithms make decisions based
on the local information in the temporal dimension. We formalize this connection,
and show how we can directly use the tools developed to study distributed approximability
of graph optimization problems to prove upper and lower bounds on the competitive
ratio achieved with time-local online algorithms. Moreover, we show how to use
computational techniques to synthesize optimal time-local algorithms.'
acknowledgement: "This research has received funding from the German Research Foundation
(DFG), grant\r\n470029389 (FlexNets), 2021-2024, and the Marie Skłodowska-Curie
grant agreement No. 840605."
article_number: '52'
article_processing_charge: No
author:
- first_name: Maciej
full_name: Pacut, Maciej
last_name: Pacut
- first_name: Mahmoud
full_name: Parham, Mahmoud
last_name: Parham
- first_name: Joel
full_name: Rybicki, Joel
id: 334EFD2E-F248-11E8-B48F-1D18A9856A87
last_name: Rybicki
orcid: 0000-0002-6432-6646
- first_name: Stefan
full_name: Schmid, Stefan
last_name: Schmid
- first_name: Jukka
full_name: Suomela, Jukka
last_name: Suomela
- first_name: Aleksandr
full_name: Tereshchenko, Aleksandr
last_name: Tereshchenko
citation:
ama: 'Pacut M, Parham M, Rybicki J, Schmid S, Suomela J, Tereshchenko A. Brief announcement:
Temporal locality in online algorithms. In: 36th International Symposium on
Distributed Computing. Vol 246. Schloss Dagstuhl - Leibniz-Zentrum für Informatik;
2022. doi:10.4230/LIPIcs.DISC.2022.52'
apa: 'Pacut, M., Parham, M., Rybicki, J., Schmid, S., Suomela, J., & Tereshchenko,
A. (2022). Brief announcement: Temporal locality in online algorithms. In 36th
International Symposium on Distributed Computing (Vol. 246). Augusta, GA,
United States: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. https://doi.org/10.4230/LIPIcs.DISC.2022.52'
chicago: 'Pacut, Maciej, Mahmoud Parham, Joel Rybicki, Stefan Schmid, Jukka Suomela,
and Aleksandr Tereshchenko. “Brief Announcement: Temporal Locality in Online Algorithms.”
In 36th International Symposium on Distributed Computing, Vol. 246. Schloss
Dagstuhl - Leibniz-Zentrum für Informatik, 2022. https://doi.org/10.4230/LIPIcs.DISC.2022.52.'
ieee: 'M. Pacut, M. Parham, J. Rybicki, S. Schmid, J. Suomela, and A. Tereshchenko,
“Brief announcement: Temporal locality in online algorithms,” in 36th International
Symposium on Distributed Computing, Augusta, GA, United States, 2022, vol.
246.'
ista: 'Pacut M, Parham M, Rybicki J, Schmid S, Suomela J, Tereshchenko A. 2022.
Brief announcement: Temporal locality in online algorithms. 36th International
Symposium on Distributed Computing. DISC: Symposium on Distributed Computing vol.
246, 52.'
mla: 'Pacut, Maciej, et al. “Brief Announcement: Temporal Locality in Online Algorithms.”
36th International Symposium on Distributed Computing, vol. 246, 52, Schloss
Dagstuhl - Leibniz-Zentrum für Informatik, 2022, doi:10.4230/LIPIcs.DISC.2022.52.'
short: M. Pacut, M. Parham, J. Rybicki, S. Schmid, J. Suomela, A. Tereshchenko,
in:, 36th International Symposium on Distributed Computing, Schloss Dagstuhl -
Leibniz-Zentrum für Informatik, 2022.
conference:
end_date: 2022-10-27
location: Augusta, GA, United States
name: 'DISC: Symposium on Distributed Computing'
start_date: 2022-10-25
date_created: 2023-01-13T11:06:28Z
date_published: 2022-10-17T00:00:00Z
date_updated: 2023-01-27T06:59:29Z
day: '17'
ddc:
- '000'
department:
- _id: DaAl
doi: 10.4230/LIPIcs.DISC.2022.52
ec_funded: 1
file:
- access_level: open_access
checksum: 11bbb56f68a00f2cf6bcce6cc7f5c5f9
content_type: application/pdf
creator: dernst
date_created: 2023-01-27T06:58:02Z
date_updated: 2023-01-27T06:58:02Z
file_id: '12409'
file_name: 2022_LIPICs_Pacut.pdf
file_size: 524804
relation: main_file
success: 1
file_date_updated: 2023-01-27T06:58:02Z
has_accepted_license: '1'
intvolume: ' 246'
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
project:
- _id: 26A5D39A-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '840605'
name: Coordination in constrained and natural distributed systems
publication: 36th International Symposium on Distributed Computing
publication_identifier:
eisbn:
- '9783959772556'
eissn:
- 1868-8969
publication_status: published
publisher: Schloss Dagstuhl - Leibniz-Zentrum für Informatik
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Brief announcement: Temporal locality in online algorithms'
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 246
year: '2022'
...
---
_id: '12184'
abstract:
- lang: eng
text: We review recent results on adiabatic theory for ground states of extended
gapped fermionic lattice systems under several different assumptions. More precisely,
we present generalized super-adiabatic theorems for extended but finite and infinite
systems, assuming either a uniform gap or a gap in the bulk above the unperturbed
ground state. The goal of this Review is to provide an overview of these adiabatic
theorems and briefly outline the main ideas and techniques required in their proofs.
acknowledgement: "It is a pleasure to thank Stefan Teufel for numerous interesting
discussions, fruitful collaboration, and many helpful comments on an earlier version
of the manuscript. J.H. acknowledges partial financial support from the ERC Advanced
Grant No. 101020331 “Random\r\nmatrices beyond Wigner-Dyson-Mehta.” T.W. acknowledges
financial support from the DFG research unit FOR 5413 “Long-range interacting quantum
spin systems out of equilibrium: Experiment, Theory and Mathematics.\" "
article_number: '121101'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Sven Joscha
full_name: Henheik, Sven Joscha
id: 31d731d7-d235-11ea-ad11-b50331c8d7fb
last_name: Henheik
orcid: 0000-0003-1106-327X
- first_name: Tom
full_name: Wessel, Tom
last_name: Wessel
citation:
ama: Henheik SJ, Wessel T. On adiabatic theory for extended fermionic lattice systems.
Journal of Mathematical Physics. 2022;63(12). doi:10.1063/5.0123441
apa: Henheik, S. J., & Wessel, T. (2022). On adiabatic theory for extended fermionic
lattice systems. Journal of Mathematical Physics. AIP Publishing. https://doi.org/10.1063/5.0123441
chicago: Henheik, Sven Joscha, and Tom Wessel. “On Adiabatic Theory for Extended
Fermionic Lattice Systems.” Journal of Mathematical Physics. AIP Publishing,
2022. https://doi.org/10.1063/5.0123441.
ieee: S. J. Henheik and T. Wessel, “On adiabatic theory for extended fermionic lattice
systems,” Journal of Mathematical Physics, vol. 63, no. 12. AIP Publishing,
2022.
ista: Henheik SJ, Wessel T. 2022. On adiabatic theory for extended fermionic lattice
systems. Journal of Mathematical Physics. 63(12), 121101.
mla: Henheik, Sven Joscha, and Tom Wessel. “On Adiabatic Theory for Extended Fermionic
Lattice Systems.” Journal of Mathematical Physics, vol. 63, no. 12, 121101,
AIP Publishing, 2022, doi:10.1063/5.0123441.
short: S.J. Henheik, T. Wessel, Journal of Mathematical Physics 63 (2022).
date_created: 2023-01-15T23:00:52Z
date_published: 2022-12-01T00:00:00Z
date_updated: 2023-08-04T09:14:57Z
day: '01'
ddc:
- '510'
department:
- _id: LaEr
doi: 10.1063/5.0123441
ec_funded: 1
external_id:
arxiv:
- '2208.12220'
isi:
- '000905776200001'
file:
- access_level: open_access
checksum: 213b93750080460718c050e4967cfdb4
content_type: application/pdf
creator: dernst
date_created: 2023-01-27T07:10:52Z
date_updated: 2023-01-27T07:10:52Z
file_id: '12410'
file_name: 2022_JourMathPhysics_Henheik2.pdf
file_size: 5251092
relation: main_file
success: 1
file_date_updated: 2023-01-27T07:10:52Z
has_accepted_license: '1'
intvolume: ' 63'
isi: 1
issue: '12'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
project:
- _id: 62796744-2b32-11ec-9570-940b20777f1d
call_identifier: H2020
grant_number: '101020331'
name: Random matrices beyond Wigner-Dyson-Mehta
publication: Journal of Mathematical Physics
publication_identifier:
issn:
- 0022-2488
publication_status: published
publisher: AIP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: On adiabatic theory for extended fermionic lattice systems
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 63
year: '2022'
...
---
_id: '12208'
abstract:
- lang: eng
text: The inadequate understanding of the mechanisms that reversibly convert molecular
sulfur (S) into lithium sulfide (Li2S) via soluble polysulfides
(PSs) formation impedes the development of high-performance lithium-sulfur (Li-S)
batteries with non-aqueous electrolyte solutions. Here, we use operando small
and wide angle X-ray scattering and operando small angle neutron scattering (SANS)
measurements to track the nucleation, growth and dissolution of solid deposits
from atomic to sub-micron scales during real-time Li-S cell operation. In particular,
stochastic modelling based on the SANS data allows quantifying the nanoscale phase
evolution during battery cycling. We show that next to nano-crystalline Li2S
the deposit comprises solid short-chain PSs particles. The analysis of the experimental
data suggests that initially, Li2S2
precipitates from the solution and then is partially converted via solid-state
electroreduction to Li2S. We further demonstrate that mass
transport, rather than electron transport through a thin passivating film, limits
the discharge capacity and rate performance in Li-S cells.
acknowledgement: "This project has received funding from the European Union’s Horizon
2020 research and innovation program under the Marie Skłodowska-Curie grant NanoEvolution,
grant agreement No 894042. The authors acknowledge the CERIC-ERIC Consortium for
the access to the Austrian SAXS beamline and TU Graz for support through the Lead
Project LP-03.\r\nLikewise, the use of SOMAPP Lab, a core facility supported by
the Austrian Federal Ministry of Education, Science and Research, the Graz University
of Technology, the University of Graz, and Anton Paar GmbH is acknowledged. In addition,
the authors acknowledge access to the D-22SANS beamline at the ILL neutron source.
Electron microscopy measurements were performed at the Scientific Scenter for Optical
and Electron Microscopy (ScopeM) of the Swiss Federal Institute of Technology. C.P.
and J.M.M. thank A. Senol for her support with the SANS\r\nbeamtime preparation.
S.D.T, A.V. and R.D. acknowledge the financial support by the Slovenian Research
Agency (ARRS) research core funding P2-0393 and P2-0423. Furthermore, A.V. acknowledge
the funding from the Slovenian Research Agency, research project Z2−1863.\r\nS.A.F.
is indebted to IST Austria for support. "
article_number: '6326'
article_processing_charge: No
article_type: original
author:
- first_name: Christian
full_name: Prehal, Christian
last_name: Prehal
- first_name: Jean-Marc
full_name: von Mentlen, Jean-Marc
last_name: von Mentlen
- first_name: Sara
full_name: Drvarič Talian, Sara
last_name: Drvarič Talian
- first_name: Alen
full_name: Vizintin, Alen
last_name: Vizintin
- first_name: Robert
full_name: Dominko, Robert
last_name: Dominko
- first_name: Heinz
full_name: Amenitsch, Heinz
last_name: Amenitsch
- first_name: Lionel
full_name: Porcar, Lionel
last_name: Porcar
- first_name: Stefan Alexander
full_name: Freunberger, Stefan Alexander
id: A8CA28E6-CE23-11E9-AD2D-EC27E6697425
last_name: Freunberger
orcid: 0000-0003-2902-5319
- first_name: Vanessa
full_name: Wood, Vanessa
last_name: Wood
citation:
ama: Prehal C, von Mentlen J-M, Drvarič Talian S, et al. On the nanoscale structural
evolution of solid discharge products in lithium-sulfur batteries using operando
scattering. Nature Communications. 2022;13. doi:10.1038/s41467-022-33931-4
apa: Prehal, C., von Mentlen, J.-M., Drvarič Talian, S., Vizintin, A., Dominko,
R., Amenitsch, H., … Wood, V. (2022). On the nanoscale structural evolution of
solid discharge products in lithium-sulfur batteries using operando scattering.
Nature Communications. Springer Nature. https://doi.org/10.1038/s41467-022-33931-4
chicago: Prehal, Christian, Jean-Marc von Mentlen, Sara Drvarič Talian, Alen Vizintin,
Robert Dominko, Heinz Amenitsch, Lionel Porcar, Stefan Alexander Freunberger,
and Vanessa Wood. “On the Nanoscale Structural Evolution of Solid Discharge Products
in Lithium-Sulfur Batteries Using Operando Scattering.” Nature Communications.
Springer Nature, 2022. https://doi.org/10.1038/s41467-022-33931-4.
ieee: C. Prehal et al., “On the nanoscale structural evolution of solid discharge
products in lithium-sulfur batteries using operando scattering,” Nature Communications,
vol. 13. Springer Nature, 2022.
ista: Prehal C, von Mentlen J-M, Drvarič Talian S, Vizintin A, Dominko R, Amenitsch
H, Porcar L, Freunberger SA, Wood V. 2022. On the nanoscale structural evolution
of solid discharge products in lithium-sulfur batteries using operando scattering.
Nature Communications. 13, 6326.
mla: Prehal, Christian, et al. “On the Nanoscale Structural Evolution of Solid Discharge
Products in Lithium-Sulfur Batteries Using Operando Scattering.” Nature Communications,
vol. 13, 6326, Springer Nature, 2022, doi:10.1038/s41467-022-33931-4.
short: C. Prehal, J.-M. von Mentlen, S. Drvarič Talian, A. Vizintin, R. Dominko,
H. Amenitsch, L. Porcar, S.A. Freunberger, V. Wood, Nature Communications 13 (2022).
date_created: 2023-01-16T09:45:09Z
date_published: 2022-10-24T00:00:00Z
date_updated: 2023-08-04T09:15:31Z
day: '24'
ddc:
- '540'
department:
- _id: StFr
doi: 10.1038/s41467-022-33931-4
external_id:
isi:
- '000871563700006'
pmid:
- '36280671'
file:
- access_level: open_access
checksum: 5034336dbf0f860030ef745c08df9e0e
content_type: application/pdf
creator: dernst
date_created: 2023-01-27T07:19:11Z
date_updated: 2023-01-27T07:19:11Z
file_id: '12411'
file_name: 2022_NatureCommunications_Prehal.pdf
file_size: 4216931
relation: main_file
success: 1
file_date_updated: 2023-01-27T07:19:11Z
has_accepted_license: '1'
intvolume: ' 13'
isi: 1
keyword:
- General Physics and Astronomy
- General Biochemistry
- Genetics and Molecular Biology
- General Chemistry
- Multidisciplinary
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
pmid: 1
publication: Nature Communications
publication_identifier:
issn:
- 2041-1723
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: On the nanoscale structural evolution of solid discharge products in lithium-sulfur
batteries using operando scattering
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 13
year: '2022'
...
---
_id: '12209'
abstract:
- lang: eng
text: Embryo development requires biochemical signalling to generate patterns of
cell fates and active mechanical forces to drive tissue shape changes. However,
how these processes are coordinated, and how tissue patterning is preserved despite
the cellular flows occurring during morphogenesis, remains poorly understood.
Gastrulation is a crucial embryonic stage that involves both patterning and internalization
of the mesendoderm germ layer tissue. Here we show that, in zebrafish embryos,
a gradient in Nodal signalling orchestrates pattern-preserving internalization
movements by triggering a motility-driven unjamming transition. In addition to
its role as a morphogen determining embryo patterning, graded Nodal signalling
mechanically subdivides the mesendoderm into a small fraction of highly protrusive
leader cells, able to autonomously internalize via local unjamming, and less protrusive
followers, which need to be pulled inwards by the leaders. The Nodal gradient
further enforces a code of preferential adhesion coupling leaders to their immediate
followers, resulting in a collective and ordered mode of internalization that
preserves mesendoderm patterning. Integrating this dual mechanical role of Nodal
signalling into minimal active particle simulations quantitatively predicts both
physiological and experimentally perturbed internalization movements. This provides
a quantitative framework for how a morphogen-encoded unjamming transition can
bidirectionally couple tissue mechanics with patterning during complex three-dimensional
morphogenesis.
acknowledged_ssus:
- _id: Bio
- _id: LifeSc
acknowledgement: "We thank K. Sampath, A. Pauli and Y. Bellaїche for feedback on the
manuscript. We also thank the members of the Heisenberg group, in particular A.
Schauer and F. Nur Arslan, for help, technical advice and discussions, and the Bioimaging
and Life Science facilities at IST\r\nAustria for continuous support. We thank C.
Flandoli for the artwork in the figures. This work was supported by postdoctoral
fellowships from EMBO (LTF-850-2017) and HFSP (LT000429/2018-L2) to D.P. and the
European Union (European Research Council starting grant 851288 to É.H. and European
Research Council advanced grant 742573 to C.-P.H.)."
article_processing_charge: No
article_type: original
author:
- first_name: Diana C
full_name: Nunes Pinheiro, Diana C
id: 2E839F16-F248-11E8-B48F-1D18A9856A87
last_name: Nunes Pinheiro
orcid: 0000-0003-4333-7503
- first_name: Roland
full_name: Kardos, Roland
id: 4039350E-F248-11E8-B48F-1D18A9856A87
last_name: Kardos
- first_name: Edouard B
full_name: Hannezo, Edouard B
id: 3A9DB764-F248-11E8-B48F-1D18A9856A87
last_name: Hannezo
orcid: 0000-0001-6005-1561
- first_name: Carl-Philipp J
full_name: Heisenberg, Carl-Philipp J
id: 39427864-F248-11E8-B48F-1D18A9856A87
last_name: Heisenberg
orcid: 0000-0002-0912-4566
citation:
ama: Nunes Pinheiro DC, Kardos R, Hannezo EB, Heisenberg C-PJ. Morphogen gradient
orchestrates pattern-preserving tissue morphogenesis via motility-driven unjamming.
Nature Physics. 2022;18(12):1482-1493. doi:10.1038/s41567-022-01787-6
apa: Nunes Pinheiro, D. C., Kardos, R., Hannezo, E. B., & Heisenberg, C.-P.
J. (2022). Morphogen gradient orchestrates pattern-preserving tissue morphogenesis
via motility-driven unjamming. Nature Physics. Springer Nature. https://doi.org/10.1038/s41567-022-01787-6
chicago: Nunes Pinheiro, Diana C, Roland Kardos, Edouard B Hannezo, and Carl-Philipp
J Heisenberg. “Morphogen Gradient Orchestrates Pattern-Preserving Tissue Morphogenesis
via Motility-Driven Unjamming.” Nature Physics. Springer Nature, 2022.
https://doi.org/10.1038/s41567-022-01787-6.
ieee: D. C. Nunes Pinheiro, R. Kardos, E. B. Hannezo, and C.-P. J. Heisenberg, “Morphogen
gradient orchestrates pattern-preserving tissue morphogenesis via motility-driven
unjamming,” Nature Physics, vol. 18, no. 12. Springer Nature, pp. 1482–1493,
2022.
ista: Nunes Pinheiro DC, Kardos R, Hannezo EB, Heisenberg C-PJ. 2022. Morphogen
gradient orchestrates pattern-preserving tissue morphogenesis via motility-driven
unjamming. Nature Physics. 18(12), 1482–1493.
mla: Nunes Pinheiro, Diana C., et al. “Morphogen Gradient Orchestrates Pattern-Preserving
Tissue Morphogenesis via Motility-Driven Unjamming.” Nature Physics, vol.
18, no. 12, Springer Nature, 2022, pp. 1482–93, doi:10.1038/s41567-022-01787-6.
short: D.C. Nunes Pinheiro, R. Kardos, E.B. Hannezo, C.-P.J. Heisenberg, Nature
Physics 18 (2022) 1482–1493.
date_created: 2023-01-16T09:45:19Z
date_published: 2022-12-01T00:00:00Z
date_updated: 2023-08-04T09:15:58Z
day: '01'
ddc:
- '570'
department:
- _id: CaHe
- _id: EdHa
doi: 10.1038/s41567-022-01787-6
ec_funded: 1
external_id:
isi:
- '000871319900002'
file:
- access_level: open_access
checksum: c86a8e8d80d1bfc46d56a01e88a2526a
content_type: application/pdf
creator: dernst
date_created: 2023-01-27T07:32:01Z
date_updated: 2023-01-27T07:32:01Z
file_id: '12412'
file_name: 2022_NaturePhysics_Pinheiro.pdf
file_size: 36703569
relation: main_file
success: 1
file_date_updated: 2023-01-27T07:32:01Z
has_accepted_license: '1'
intvolume: ' 18'
isi: 1
issue: '12'
keyword:
- General Physics and Astronomy
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
page: 1482-1493
project:
- _id: 26520D1E-B435-11E9-9278-68D0E5697425
grant_number: ALTF 850-2017
name: Coordination of mesendoderm cell fate specification and internalization during
zebrafish gastrulation
- _id: 26520D1E-B435-11E9-9278-68D0E5697425
grant_number: ALTF 850-2017
name: Coordination of mesendoderm cell fate specification and internalization during
zebrafish gastrulation
- _id: 05943252-7A3F-11EA-A408-12923DDC885E
call_identifier: H2020
grant_number: '851288'
name: Design Principles of Branching Morphogenesis
- _id: 260F1432-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '742573'
name: Interaction and feedback between cell mechanics and fate specification in
vertebrate gastrulation
publication: Nature Physics
publication_identifier:
eissn:
- 1745-2481
issn:
- 1745-2473
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Morphogen gradient orchestrates pattern-preserving tissue morphogenesis via
motility-driven unjamming
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 18
year: '2022'
...
---
_id: '12210'
abstract:
- lang: eng
text: "The aim of this paper is to find new estimates for the norms of functions
of a (minus) distinguished Laplace operator L on the ‘ax+b’ groups. The central
part is devoted to spectrally localized wave propagators, that is, functions of
the type ψ(L−−√)exp(itL−−√), with ψ∈C0(R). We show that for t→+∞, the convolution
kernel kt of this operator satisfies\r\n∥kt∥1≍t,∥kt∥∞≍1,\r\nso that the upper
estimates of D. Müller and C. Thiele (Studia Math., 2007) are sharp. As a necessary
component, we recall the Plancherel density of L and spend certain time presenting
and comparing different approaches to its calculation. Using its explicit form,
we estimate uniform norms of several functions of the shifted Laplace-Beltrami
operator Δ~, closely related to L. The functions include in particular exp(−tΔ~γ),
t>0,γ>0, and (Δ~−z)s, with complex z, s."
acknowledgement: "Yu. K. thanks Professor Waldemar Hebisch for valuable discussions
on the general context of multipliers on Lie groups. This work was started during
an ICL-CNRS fellowship of the second\r\nnamed author at the Imperial College London.
Yu. K. is supported by the ANR-19-CE40-0002 grant of the French National Research
Agency (ANR). H. Z. is supported by the European Union’s Horizon 2020 research and
innovation programme under the Marie Skłodowska-Curie grant agreement No. 754411
and the Lise Meitner fellowship, Austrian Science Fund (FWF) M3337. R. A. was supported
by the EPSRC grant EP/R003025. M. R. is supported by the EPSRC grant EP/R003025/2
and by the FWO Odysseus 1 grant G.0H94.18N: Analysis and Partial Differential Equations."
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Rauan
full_name: Akylzhanov, Rauan
last_name: Akylzhanov
- first_name: Yulia
full_name: Kuznetsova, Yulia
last_name: Kuznetsova
- first_name: Michael
full_name: Ruzhansky, Michael
last_name: Ruzhansky
- first_name: Haonan
full_name: Zhang, Haonan
id: D8F41E38-9E66-11E9-A9E2-65C2E5697425
last_name: Zhang
citation:
ama: Akylzhanov R, Kuznetsova Y, Ruzhansky M, Zhang H. Norms of certain functions
of a distinguished Laplacian on the ax + b groups. Mathematische Zeitschrift.
2022;302(4):2327-2352. doi:10.1007/s00209-022-03143-z
apa: Akylzhanov, R., Kuznetsova, Y., Ruzhansky, M., & Zhang, H. (2022). Norms
of certain functions of a distinguished Laplacian on the ax + b groups. Mathematische
Zeitschrift. Springer Nature. https://doi.org/10.1007/s00209-022-03143-z
chicago: Akylzhanov, Rauan, Yulia Kuznetsova, Michael Ruzhansky, and Haonan Zhang.
“Norms of Certain Functions of a Distinguished Laplacian on the Ax + b Groups.”
Mathematische Zeitschrift. Springer Nature, 2022. https://doi.org/10.1007/s00209-022-03143-z.
ieee: R. Akylzhanov, Y. Kuznetsova, M. Ruzhansky, and H. Zhang, “Norms of certain
functions of a distinguished Laplacian on the ax + b groups,” Mathematische
Zeitschrift, vol. 302, no. 4. Springer Nature, pp. 2327–2352, 2022.
ista: Akylzhanov R, Kuznetsova Y, Ruzhansky M, Zhang H. 2022. Norms of certain functions
of a distinguished Laplacian on the ax + b groups. Mathematische Zeitschrift.
302(4), 2327–2352.
mla: Akylzhanov, Rauan, et al. “Norms of Certain Functions of a Distinguished Laplacian
on the Ax + b Groups.” Mathematische Zeitschrift, vol. 302, no. 4, Springer
Nature, 2022, pp. 2327–52, doi:10.1007/s00209-022-03143-z.
short: R. Akylzhanov, Y. Kuznetsova, M. Ruzhansky, H. Zhang, Mathematische Zeitschrift
302 (2022) 2327–2352.
date_created: 2023-01-16T09:45:31Z
date_published: 2022-12-01T00:00:00Z
date_updated: 2023-08-04T09:22:14Z
day: '01'
department:
- _id: JaMa
doi: 10.1007/s00209-022-03143-z
ec_funded: 1
external_id:
arxiv:
- '2101.00584'
isi:
- '000859680700001'
intvolume: ' 302'
isi: 1
issue: '4'
keyword:
- General Mathematics
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/2101.00584
month: '12'
oa: 1
oa_version: Preprint
page: 2327-2352
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '754411'
name: ISTplus - Postdoctoral Fellowships
- _id: eb958bca-77a9-11ec-83b8-c565cb50d8d6
grant_number: M03337
name: Curvature-dimension in noncommutative analysis
publication: Mathematische Zeitschrift
publication_identifier:
eissn:
- 1432-1823
issn:
- 0025-5874
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Norms of certain functions of a distinguished Laplacian on the ax + b groups
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 302
year: '2022'
...
---
_id: '12212'
abstract:
- lang: eng
text: Alzheimer’s disease (AD) is characterized by a reorganization of brain activity
determining network hyperexcitability and loss of synaptic plasticity. Precisely,
a dysfunction in metabotropic GABAB receptor signalling through G protein-gated
inwardly rectifying K+ (GIRK or Kir3) channels on the hippocampus has been postulated.
Thus, we determined the impact of amyloid-β (Aβ) pathology in GIRK channel density,
subcellular distribution, and its association with GABAB receptors in hippocampal
CA1 pyramidal neurons from the APP/PS1 mouse model using quantitative SDS-digested
freeze-fracture replica labelling (SDS-FRL) and proximity ligation in situ assay
(P-LISA). In wild type mice, single SDS-FRL detection revealed a similar dendritic
gradient for GIRK1 and GIRK2 in CA1 pyramidal cells, with higher densities in
spines, and GIRK3 showed a lower and uniform distribution. Double SDS-FRL showed
a co-clustering of GIRK2 and GIRK1 in post- and presynaptic compartments, but
not for GIRK2 and GIRK3. Likewise, double GABAB1 and GIRK2 SDS-FRL detection displayed
a high degree of co-clustering in nanodomains (40–50 nm) mostly in spines and
axon terminals. In APP/PS1 mice, the density of GIRK2 and GIRK1, but not for GIRK3,
was significantly reduced along the neuronal surface of CA1 pyramidal cells and
in axon terminals contacting them. Importantly, GABAB1 and GIRK2 co-clustering
was not present in APP/PS1 mice. Similarly, P-LISA experiments revealed a significant
reduction in GABAB1 and GIRK2 interaction on the hippocampus of this animal model.
Overall, our results provide compelling evidence showing a significant reduction
on the cell surface density of pre- and postsynaptic GIRK1 and GIRK2, but not
GIRK3, and a decline in GABAB receptors and GIRK2 channels co-clustering in hippocampal
pyramidal neurons from APP/PS1 mice, thus suggesting that a disruption in the
GABAB receptor–GIRK channel membrane assembly causes dysregulation in the GABAB
signalling via GIRK channels in this AD animal model.
acknowledgement: "We thank Ms. Diane Latawiec for the English revision of the manuscript.
Funding sources were the Spanish Ministerio de Economía y Competitividad, Junta
de Comunidades de Castilla-La Mancha (Spain), and Life Science Innovation Center
at University of Fukui. We thank Centres de Recerca de Catalunya (CERCA) Programme/Generalitat
de Catalunya for IDIBELL institutional support. We thank Hitoshi Takagi and Takako
Maegawa at the University of Fukui for their technical assistance on SDS-FRL experiments.\r\nThis
work was supported by grants from the Spanish Ministerio de Economía y Competitividad
(BFU2015-63769-R, RTI2018-095812-B-I00, and PID2021-125875OB-I00) and Junta de Comunidades
de Castilla-La Mancha (SBPLY/17/180501/000229 and SBPLY/21/180501/000064) to RL,
Life Science Innovation Center at University of Fukui and JSPS KAKENHI (Grant Numbers
16H04662, 19H03323, and 20H05058) to YF, and Margarita Salas fellowship from Ministerio
de Universidades and Universidad de Castilla-La Mancha to AMB."
article_number: '136'
article_processing_charge: No
article_type: original
author:
- first_name: Alejandro
full_name: Martín-Belmonte, Alejandro
last_name: Martín-Belmonte
- first_name: Carolina
full_name: Aguado, Carolina
last_name: Aguado
- first_name: Rocío
full_name: Alfaro-Ruiz, Rocío
last_name: Alfaro-Ruiz
- first_name: Ana Esther
full_name: Moreno-Martínez, Ana Esther
last_name: Moreno-Martínez
- first_name: Luis
full_name: de la Ossa, Luis
last_name: de la Ossa
- first_name: Ester
full_name: Aso, Ester
last_name: Aso
- first_name: Laura
full_name: Gómez-Acero, Laura
last_name: Gómez-Acero
- first_name: Ryuichi
full_name: Shigemoto, Ryuichi
id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
last_name: Shigemoto
orcid: 0000-0001-8761-9444
- first_name: Yugo
full_name: Fukazawa, Yugo
last_name: Fukazawa
- first_name: Francisco
full_name: Ciruela, Francisco
last_name: Ciruela
- first_name: Rafael
full_name: Luján, Rafael
last_name: Luján
citation:
ama: Martín-Belmonte A, Aguado C, Alfaro-Ruiz R, et al. Nanoscale alterations in
GABAB receptors and GIRK channel organization on the hippocampus of APP/PS1 mice.
Alzheimer’s Research & Therapy. 2022;14. doi:10.1186/s13195-022-01078-5
apa: Martín-Belmonte, A., Aguado, C., Alfaro-Ruiz, R., Moreno-Martínez, A. E., de
la Ossa, L., Aso, E., … Luján, R. (2022). Nanoscale alterations in GABAB receptors
and GIRK channel organization on the hippocampus of APP/PS1 mice. Alzheimer’s
Research & Therapy. Springer Nature. https://doi.org/10.1186/s13195-022-01078-5
chicago: Martín-Belmonte, Alejandro, Carolina Aguado, Rocío Alfaro-Ruiz, Ana Esther
Moreno-Martínez, Luis de la Ossa, Ester Aso, Laura Gómez-Acero, et al. “Nanoscale
Alterations in GABAB Receptors and GIRK Channel Organization on the Hippocampus
of APP/PS1 Mice.” Alzheimer’s Research & Therapy. Springer Nature,
2022. https://doi.org/10.1186/s13195-022-01078-5.
ieee: A. Martín-Belmonte et al., “Nanoscale alterations in GABAB receptors
and GIRK channel organization on the hippocampus of APP/PS1 mice,” Alzheimer’s
Research & Therapy, vol. 14. Springer Nature, 2022.
ista: Martín-Belmonte A, Aguado C, Alfaro-Ruiz R, Moreno-Martínez AE, de la Ossa
L, Aso E, Gómez-Acero L, Shigemoto R, Fukazawa Y, Ciruela F, Luján R. 2022. Nanoscale
alterations in GABAB receptors and GIRK channel organization on the hippocampus
of APP/PS1 mice. Alzheimer’s Research & Therapy. 14, 136.
mla: Martín-Belmonte, Alejandro, et al. “Nanoscale Alterations in GABAB Receptors
and GIRK Channel Organization on the Hippocampus of APP/PS1 Mice.” Alzheimer’s
Research & Therapy, vol. 14, 136, Springer Nature, 2022, doi:10.1186/s13195-022-01078-5.
short: A. Martín-Belmonte, C. Aguado, R. Alfaro-Ruiz, A.E. Moreno-Martínez, L. de
la Ossa, E. Aso, L. Gómez-Acero, R. Shigemoto, Y. Fukazawa, F. Ciruela, R. Luján,
Alzheimer’s Research & Therapy 14 (2022).
date_created: 2023-01-16T09:45:51Z
date_published: 2022-09-21T00:00:00Z
date_updated: 2023-08-04T09:23:10Z
day: '21'
ddc:
- '570'
department:
- _id: RySh
doi: 10.1186/s13195-022-01078-5
external_id:
isi:
- '000857985500001'
file:
- access_level: open_access
checksum: 88e49715ad6a1abf0fdb27efd65368dc
content_type: application/pdf
creator: dernst
date_created: 2023-01-27T07:53:18Z
date_updated: 2023-01-27T07:53:18Z
file_id: '12413'
file_name: 2022_AlzheimersResearch_MartinBelmont.pdf
file_size: 11013325
relation: main_file
success: 1
file_date_updated: 2023-01-27T07:53:18Z
has_accepted_license: '1'
intvolume: ' 14'
isi: 1
keyword:
- Cognitive Neuroscience
- Neurology (clinical)
- Neurology
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
publication: Alzheimer's Research & Therapy
publication_identifier:
issn:
- 1758-9193
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Nanoscale alterations in GABAB receptors and GIRK channel organization on the
hippocampus of APP/PS1 mice
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 14
year: '2022'
...
---
_id: '12213'
abstract:
- lang: eng
text: 'Motivated by properties-controlling potential of the strain, we investigate
strain dependence of structure, electronic, and magnetic properties of Sr2IrO4
using complementary theoretical tools: ab-initio calculations, analytical approaches
(rigid octahedra picture, Slater-Koster integrals), and extended t−J model. We
find that strain affects both Ir-Ir distance and Ir-O-Ir angle, and the rigid
octahedra picture is not relevant. Second, we find fundamentally different behavior
for compressive and tensile strain. One remarkable feature is the formation of
two subsets of bond- and orbital-dependent carriers, a compass-like model, under
compression. This originates from the strain-induced renormalization of the Ir-O-Ir
superexchange and O on-site energy. We also show that under compressive (tensile)
strain, Fermi surface becomes highly dispersive (relatively flat). Already at
a tensile strain of 1.5%, we observe spectral weight redistribution, with the
low-energy band acquiring almost purely singlet character. These results can be
directly compared with future experiments.'
acknowledgement: E.M.P. thanks Eugenio Paris, Thorsten Schmitt, Krzysztof Wohlfeld,
and other coauthors for an inspiring previous collaboration23, and is grateful to
Gang Cao, Ambrose Seo, and Jungho Kim for insightful discussions. R.R. acknowledges
helpful discussion with Sanjeev Kumar and Manuel Richter. This project has received
funding from the European Union’s Horizon 2020 research and innovation program under
the Marie Sklodowska-Curie grant agreement No 754411. C.C.C. acknowledges support
from the U.S. National Science Foundation Award No. DMR-2142801.
article_number: '90'
article_processing_charge: No
article_type: original
author:
- first_name: Ekaterina
full_name: Paerschke, Ekaterina
id: 8275014E-6063-11E9-9B7F-6338E6697425
last_name: Paerschke
orcid: 0000-0003-0853-8182
- first_name: Wei-Chih
full_name: Chen, Wei-Chih
last_name: Chen
- first_name: Rajyavardhan
full_name: Ray, Rajyavardhan
last_name: Ray
- first_name: Cheng-Chien
full_name: Chen, Cheng-Chien
last_name: Chen
citation:
ama: Paerschke E, Chen W-C, Ray R, Chen C-C. Evolution of electronic and magnetic
properties of Sr₂IrO₄ under strain. npj Quantum Materials. 2022;7. doi:10.1038/s41535-022-00496-w
apa: Paerschke, E., Chen, W.-C., Ray, R., & Chen, C.-C. (2022). Evolution of
electronic and magnetic properties of Sr₂IrO₄ under strain. Npj Quantum Materials.
Springer Nature. https://doi.org/10.1038/s41535-022-00496-w
chicago: Paerschke, Ekaterina, Wei-Chih Chen, Rajyavardhan Ray, and Cheng-Chien
Chen. “Evolution of Electronic and Magnetic Properties of Sr₂IrO₄ under Strain.”
Npj Quantum Materials. Springer Nature, 2022. https://doi.org/10.1038/s41535-022-00496-w.
ieee: E. Paerschke, W.-C. Chen, R. Ray, and C.-C. Chen, “Evolution of electronic
and magnetic properties of Sr₂IrO₄ under strain,” npj Quantum Materials,
vol. 7. Springer Nature, 2022.
ista: Paerschke E, Chen W-C, Ray R, Chen C-C. 2022. Evolution of electronic and
magnetic properties of Sr₂IrO₄ under strain. npj Quantum Materials. 7, 90.
mla: Paerschke, Ekaterina, et al. “Evolution of Electronic and Magnetic Properties
of Sr₂IrO₄ under Strain.” Npj Quantum Materials, vol. 7, 90, Springer Nature,
2022, doi:10.1038/s41535-022-00496-w.
short: E. Paerschke, W.-C. Chen, R. Ray, C.-C. Chen, Npj Quantum Materials 7 (2022).
date_created: 2023-01-16T09:46:01Z
date_published: 2022-09-10T00:00:00Z
date_updated: 2023-08-04T09:23:43Z
day: '10'
ddc:
- '530'
department:
- _id: MiLe
doi: 10.1038/s41535-022-00496-w
ec_funded: 1
external_id:
isi:
- '000852381200003'
file:
- access_level: open_access
checksum: d93b477b5b95c0d1b8f9fef90a81f565
content_type: application/pdf
creator: dernst
date_created: 2023-01-27T07:59:27Z
date_updated: 2023-01-27T07:59:27Z
file_id: '12414'
file_name: 2022_NPJ_Paerschke.pdf
file_size: 1852598
relation: main_file
success: 1
file_date_updated: 2023-01-27T07:59:27Z
has_accepted_license: '1'
intvolume: ' 7'
isi: 1
keyword:
- Condensed Matter Physics
- Electronic
- Optical and Magnetic Materials
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '754411'
name: ISTplus - Postdoctoral Fellowships
publication: npj Quantum Materials
publication_identifier:
eissn:
- 2397-4648
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
link:
- relation: erratum
url: https://doi.org/10.1038/s41535-022-00510-1
scopus_import: '1'
status: public
title: Evolution of electronic and magnetic properties of Sr₂IrO₄ under strain
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 7
year: '2022'
...
---
_id: '12214'
abstract:
- lang: eng
text: 'Motivated by Kloeckner’s result on the isometry group of the quadratic Wasserstein
space W2(Rn), we describe the isometry group Isom(Wp(E)) for all parameters 0
< p < ∞ and for all separable real Hilbert spaces E. In particular, we show that
Wp(X) is isometrically rigid for all Polish space X whenever 0 < p < 1. This is
a consequence of our more general result: we prove that W1(X) is isometrically
rigid if X is a complete separable metric space that satisfies the strict triangle
inequality. Furthermore, we show that this latter rigidity result does not generalise
to parameters p > 1, by solving Kloeckner’s problem affirmatively on the existence
of mass-splitting isometries. '
acknowledgement: "Geher was supported by the Leverhulme Trust Early Career Fellowship
(ECF-2018-125), and also by the Hungarian National Research, Development and Innovation
Office - NKFIH (grant no. K115383 and K134944).\r\nTitkos was supported by the Hungarian
National Research, Development and Innovation Office - NKFIH (grant no. PD128374,
grant no. K115383 and K134944), by the J´anos Bolyai Research Scholarship of the
Hungarian Academy of Sciences, and by the UNKP-20-5-BGE-1 New National Excellence
Program of the ´Ministry of Innovation and Technology.\r\nVirosztek was supported
by the European Union’s Horizon 2020 research and innovation program under the Marie
Sklodowska-Curie Grant Agreement No. 846294, by the Momentum program of the Hungarian
Academy of Sciences under grant agreement no. LP2021-15/2021, and partially supported
by the Hungarian National Research, Development and Innovation Office - NKFIH (grants
no. K124152 and no. KH129601). "
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: György Pál
full_name: Gehér, György Pál
last_name: Gehér
- first_name: Tamás
full_name: Titkos, Tamás
last_name: Titkos
- first_name: Daniel
full_name: Virosztek, Daniel
id: 48DB45DA-F248-11E8-B48F-1D18A9856A87
last_name: Virosztek
orcid: 0000-0003-1109-5511
citation:
ama: 'Gehér GP, Titkos T, Virosztek D. The isometry group of Wasserstein spaces:
The Hilbertian case. Journal of the London Mathematical Society. 2022;106(4):3865-3894.
doi:10.1112/jlms.12676'
apa: 'Gehér, G. P., Titkos, T., & Virosztek, D. (2022). The isometry group of
Wasserstein spaces: The Hilbertian case. Journal of the London Mathematical
Society. Wiley. https://doi.org/10.1112/jlms.12676'
chicago: 'Gehér, György Pál, Tamás Titkos, and Daniel Virosztek. “The Isometry Group
of Wasserstein Spaces: The Hilbertian Case.” Journal of the London Mathematical
Society. Wiley, 2022. https://doi.org/10.1112/jlms.12676.'
ieee: 'G. P. Gehér, T. Titkos, and D. Virosztek, “The isometry group of Wasserstein
spaces: The Hilbertian case,” Journal of the London Mathematical Society,
vol. 106, no. 4. Wiley, pp. 3865–3894, 2022.'
ista: 'Gehér GP, Titkos T, Virosztek D. 2022. The isometry group of Wasserstein
spaces: The Hilbertian case. Journal of the London Mathematical Society. 106(4),
3865–3894.'
mla: 'Gehér, György Pál, et al. “The Isometry Group of Wasserstein Spaces: The Hilbertian
Case.” Journal of the London Mathematical Society, vol. 106, no. 4, Wiley,
2022, pp. 3865–94, doi:10.1112/jlms.12676.'
short: G.P. Gehér, T. Titkos, D. Virosztek, Journal of the London Mathematical Society
106 (2022) 3865–3894.
date_created: 2023-01-16T09:46:13Z
date_published: 2022-09-18T00:00:00Z
date_updated: 2023-08-04T09:24:17Z
day: '18'
department:
- _id: LaEr
doi: 10.1112/jlms.12676
ec_funded: 1
external_id:
arxiv:
- '2102.02037'
isi:
- '000854878500001'
intvolume: ' 106'
isi: 1
issue: '4'
keyword:
- General Mathematics
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.2102.02037
month: '09'
oa: 1
oa_version: Preprint
page: 3865-3894
project:
- _id: 26A455A6-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '846294'
name: Geometric study of Wasserstein spaces and free probability
publication: Journal of the London Mathematical Society
publication_identifier:
eissn:
- 1469-7750
issn:
- 0024-6107
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'The isometry group of Wasserstein spaces: The Hilbertian case'
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 106
year: '2022'
...
---
_id: '12216'
abstract:
- lang: eng
text: Many trace inequalities can be expressed either as concavity/convexity theorems
or as monotonicity theorems. A classic example is the joint convexity of the quantum
relative entropy which is equivalent to the Data Processing Inequality. The latter
says that quantum operations can never increase the relative entropy. The monotonicity
versions often have many advantages, and often have direct physical application,
as in the example just mentioned. Moreover, the monotonicity results are often
valid for a larger class of maps than, say, quantum operations (which are completely
positive). In this paper we prove several new monotonicity results, the first
of which is a monotonicity theorem that has as a simple corollary a celebrated
concavity theorem of Epstein. Our starting points are the monotonicity versions
of the Lieb Concavity and the Lieb Convexity Theorems. We also give two new proofs
of these in their general forms using interpolation. We then prove our new monotonicity
theorems by several duality arguments.
acknowledgement: Work partially supported by the Lise Meitner fellowship, Austrian
Science Fund (FWF) M3337.
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Eric A.
full_name: Carlen, Eric A.
last_name: Carlen
- first_name: Haonan
full_name: Zhang, Haonan
id: D8F41E38-9E66-11E9-A9E2-65C2E5697425
last_name: Zhang
citation:
ama: Carlen EA, Zhang H. Monotonicity versions of Epstein’s concavity theorem and
related inequalities. Linear Algebra and its Applications. 2022;654:289-310.
doi:10.1016/j.laa.2022.09.001
apa: Carlen, E. A., & Zhang, H. (2022). Monotonicity versions of Epstein’s concavity
theorem and related inequalities. Linear Algebra and Its Applications.
Elsevier. https://doi.org/10.1016/j.laa.2022.09.001
chicago: Carlen, Eric A., and Haonan Zhang. “Monotonicity Versions of Epstein’s
Concavity Theorem and Related Inequalities.” Linear Algebra and Its Applications.
Elsevier, 2022. https://doi.org/10.1016/j.laa.2022.09.001.
ieee: E. A. Carlen and H. Zhang, “Monotonicity versions of Epstein’s concavity theorem
and related inequalities,” Linear Algebra and its Applications, vol. 654.
Elsevier, pp. 289–310, 2022.
ista: Carlen EA, Zhang H. 2022. Monotonicity versions of Epstein’s concavity theorem
and related inequalities. Linear Algebra and its Applications. 654, 289–310.
mla: Carlen, Eric A., and Haonan Zhang. “Monotonicity Versions of Epstein’s Concavity
Theorem and Related Inequalities.” Linear Algebra and Its Applications,
vol. 654, Elsevier, 2022, pp. 289–310, doi:10.1016/j.laa.2022.09.001.
short: E.A. Carlen, H. Zhang, Linear Algebra and Its Applications 654 (2022) 289–310.
date_created: 2023-01-16T09:46:38Z
date_published: 2022-12-01T00:00:00Z
date_updated: 2023-08-04T09:24:51Z
day: '01'
ddc:
- '510'
department:
- _id: JaMa
doi: 10.1016/j.laa.2022.09.001
external_id:
isi:
- '000860689600014'
file:
- access_level: open_access
checksum: cf3cb7e7e34baa967849f01d8f0c1ae4
content_type: application/pdf
creator: dernst
date_created: 2023-01-27T08:08:39Z
date_updated: 2023-01-27T08:08:39Z
file_id: '12415'
file_name: 2022_LinearAlgebra_Carlen.pdf
file_size: 441184
relation: main_file
success: 1
file_date_updated: 2023-01-27T08:08:39Z
has_accepted_license: '1'
intvolume: ' 654'
isi: 1
keyword:
- Discrete Mathematics and Combinatorics
- Geometry and Topology
- Numerical Analysis
- Algebra and Number Theory
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
page: 289-310
project:
- _id: eb958bca-77a9-11ec-83b8-c565cb50d8d6
grant_number: M03337
name: Curvature-dimension in noncommutative analysis
publication: Linear Algebra and its Applications
publication_identifier:
issn:
- 0024-3795
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Monotonicity versions of Epstein's concavity theorem and related inequalities
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 654
year: '2022'
...
---
_id: '12217'
abstract:
- lang: eng
text: The development dynamics and self-organization of glandular branched epithelia
is of utmost importance for our understanding of diverse processes ranging from
normal tissue growth to the growth of cancerous tissues. Using single primary
murine pancreatic ductal adenocarcinoma (PDAC) cells embedded in a collagen matrix
and adapted media supplementation, we generate organoids that self-organize into
highly branched structures displaying a seamless lumen connecting terminal end
buds, replicating in vivo PDAC architecture. We identify distinct morphogenesis
phases, each characterized by a unique pattern of cell invasion, matrix deformation,
protein expression, and respective molecular dependencies. We propose a minimal
theoretical model of a branching and proliferating tissue, capturing the dynamics
of the first phases. Observing the interaction of morphogenesis, mechanical environment
and gene expression in vitro sets a benchmark for the understanding of self-organization
processes governing complex organoid structure formation processes and branching
morphogenesis.
acknowledgement: "A.R.B. acknowledges the financial support of the European Research
Council (ERC) through the funding of the grant Principles of Integrin Mechanics
and Adhesion (PoINT) and the German Research Foundation (DFG, SFB 1032, project
ID 201269156). E.H. was supported by the European Union (European Research Council
Starting Grant 851288). D.S., M.R., and R.R. acknowledge the support by the German
Research Foundation (DFG, SFB1321 Modeling and Targeting Pancreatic Cancer, Project
S01, project ID 329628492). C.S. and M.R. acknowledge the support by the German
Research Foundation (DFG, SFB1321 Modeling and Targeting Pancreatic Cancer, Project
12, project ID 329628492). M.R. was supported by the German Research Foundation
(DFG RE 3723/4-1). A.P. and M.R. were supported by the German Cancer Aid (Max-Eder
Program 111273 and 70114328).\r\nOpen Access funding enabled and organized by Projekt
DEAL."
article_number: '5219'
article_processing_charge: No
article_type: original
author:
- first_name: S.
full_name: Randriamanantsoa, S.
last_name: Randriamanantsoa
- first_name: A.
full_name: Papargyriou, A.
last_name: Papargyriou
- first_name: H. C.
full_name: Maurer, H. C.
last_name: Maurer
- first_name: K.
full_name: Peschke, K.
last_name: Peschke
- first_name: M.
full_name: Schuster, M.
last_name: Schuster
- first_name: G.
full_name: Zecchin, G.
last_name: Zecchin
- first_name: K.
full_name: Steiger, K.
last_name: Steiger
- first_name: R.
full_name: Öllinger, R.
last_name: Öllinger
- first_name: D.
full_name: Saur, D.
last_name: Saur
- first_name: C.
full_name: Scheel, C.
last_name: Scheel
- first_name: R.
full_name: Rad, R.
last_name: Rad
- first_name: Edouard B
full_name: Hannezo, Edouard B
id: 3A9DB764-F248-11E8-B48F-1D18A9856A87
last_name: Hannezo
orcid: 0000-0001-6005-1561
- first_name: M.
full_name: Reichert, M.
last_name: Reichert
- first_name: A. R.
full_name: Bausch, A. R.
last_name: Bausch
citation:
ama: Randriamanantsoa S, Papargyriou A, Maurer HC, et al. Spatiotemporal dynamics
of self-organized branching in pancreas-derived organoids. Nature Communications.
2022;13. doi:10.1038/s41467-022-32806-y
apa: Randriamanantsoa, S., Papargyriou, A., Maurer, H. C., Peschke, K., Schuster,
M., Zecchin, G., … Bausch, A. R. (2022). Spatiotemporal dynamics of self-organized
branching in pancreas-derived organoids. Nature Communications. Springer
Nature. https://doi.org/10.1038/s41467-022-32806-y
chicago: Randriamanantsoa, S., A. Papargyriou, H. C. Maurer, K. Peschke, M. Schuster,
G. Zecchin, K. Steiger, et al. “Spatiotemporal Dynamics of Self-Organized Branching
in Pancreas-Derived Organoids.” Nature Communications. Springer Nature,
2022. https://doi.org/10.1038/s41467-022-32806-y.
ieee: S. Randriamanantsoa et al., “Spatiotemporal dynamics of self-organized
branching in pancreas-derived organoids,” Nature Communications, vol. 13.
Springer Nature, 2022.
ista: Randriamanantsoa S, Papargyriou A, Maurer HC, Peschke K, Schuster M, Zecchin
G, Steiger K, Öllinger R, Saur D, Scheel C, Rad R, Hannezo EB, Reichert M, Bausch
AR. 2022. Spatiotemporal dynamics of self-organized branching in pancreas-derived
organoids. Nature Communications. 13, 5219.
mla: Randriamanantsoa, S., et al. “Spatiotemporal Dynamics of Self-Organized Branching
in Pancreas-Derived Organoids.” Nature Communications, vol. 13, 5219, Springer
Nature, 2022, doi:10.1038/s41467-022-32806-y.
short: S. Randriamanantsoa, A. Papargyriou, H.C. Maurer, K. Peschke, M. Schuster,
G. Zecchin, K. Steiger, R. Öllinger, D. Saur, C. Scheel, R. Rad, E.B. Hannezo,
M. Reichert, A.R. Bausch, Nature Communications 13 (2022).
date_created: 2023-01-16T09:46:53Z
date_published: 2022-09-05T00:00:00Z
date_updated: 2023-08-04T09:25:23Z
day: '05'
ddc:
- '570'
department:
- _id: EdHa
doi: 10.1038/s41467-022-32806-y
ec_funded: 1
external_id:
isi:
- '000850348400025'
file:
- access_level: open_access
checksum: 295261b5172274fd5b8f85a6a6058828
content_type: application/pdf
creator: dernst
date_created: 2023-01-27T08:14:48Z
date_updated: 2023-01-27T08:14:48Z
file_id: '12416'
file_name: 2022_NatureCommunications_Randriamanantsoa.pdf
file_size: 22645149
relation: main_file
success: 1
file_date_updated: 2023-01-27T08:14:48Z
has_accepted_license: '1'
intvolume: ' 13'
isi: 1
keyword:
- General Physics and Astronomy
- General Biochemistry
- Genetics and Molecular Biology
- General Chemistry
- Multidisciplinary
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
project:
- _id: 05943252-7A3F-11EA-A408-12923DDC885E
call_identifier: H2020
grant_number: '851288'
name: Design Principles of Branching Morphogenesis
publication: Nature Communications
publication_identifier:
issn:
- 2041-1723
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
record:
- id: '13068'
relation: research_data
status: public
scopus_import: '1'
status: public
title: Spatiotemporal dynamics of self-organized branching in pancreas-derived organoids
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 13
year: '2022'
...