[{"external_id":{"isi":["000393696700005"]},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"department":[{"_id":"LaEr"}],"date_updated":"2023-09-20T11:16:57Z","citation":{"ista":"Bao Z, Erdös L, Schnelli K. 2017. Local law of addition of random matrices on optimal scale. Communications in Mathematical Physics. 349(3), 947–990.","ama":"Bao Z, Erdös L, Schnelli K. Local law of addition of random matrices on optimal scale. <i>Communications in Mathematical Physics</i>. 2017;349(3):947-990. doi:<a href=\"https://doi.org/10.1007/s00220-016-2805-6\">10.1007/s00220-016-2805-6</a>","chicago":"Bao, Zhigang, László Erdös, and Kevin Schnelli. “Local Law of Addition of Random Matrices on Optimal Scale.” <i>Communications in Mathematical Physics</i>. Springer, 2017. <a href=\"https://doi.org/10.1007/s00220-016-2805-6\">https://doi.org/10.1007/s00220-016-2805-6</a>.","apa":"Bao, Z., Erdös, L., &#38; Schnelli, K. (2017). Local law of addition of random matrices on optimal scale. <i>Communications in Mathematical Physics</i>. Springer. <a href=\"https://doi.org/10.1007/s00220-016-2805-6\">https://doi.org/10.1007/s00220-016-2805-6</a>","ieee":"Z. Bao, L. Erdös, and K. Schnelli, “Local law of addition of random matrices on optimal scale,” <i>Communications in Mathematical Physics</i>, vol. 349, no. 3. Springer, pp. 947–990, 2017.","mla":"Bao, Zhigang, et al. “Local Law of Addition of Random Matrices on Optimal Scale.” <i>Communications in Mathematical Physics</i>, vol. 349, no. 3, Springer, 2017, pp. 947–90, doi:<a href=\"https://doi.org/10.1007/s00220-016-2805-6\">10.1007/s00220-016-2805-6</a>.","short":"Z. Bao, L. Erdös, K. Schnelli, Communications in Mathematical Physics 349 (2017) 947–990."},"publisher":"Springer","file_date_updated":"2020-07-14T12:44:39Z","date_published":"2017-02-01T00:00:00Z","title":"Local law of addition of random matrices on optimal scale","publication_status":"published","abstract":[{"lang":"eng","text":"The eigenvalue distribution of the sum of two large Hermitian matrices, when one of them is conjugated by a Haar distributed unitary matrix, is asymptotically given by the free convolution of their spectral distributions. We prove that this convergence also holds locally in the bulk of the spectrum, down to the optimal scales larger than the eigenvalue spacing. The corresponding eigenvectors are fully delocalized. Similar results hold for the sum of two real symmetric matrices, when one is conjugated by Haar orthogonal matrix."}],"isi":1,"ddc":["530"],"doi":"10.1007/s00220-016-2805-6","day":"01","page":"947 - 990","year":"2017","oa":1,"publist_id":"6141","intvolume":"       349","publication":"Communications in Mathematical Physics","scopus_import":"1","author":[{"orcid":"0000-0003-3036-1475","first_name":"Zhigang","last_name":"Bao","full_name":"Bao, Zhigang","id":"442E6A6C-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Erdös, László","id":"4DBD5372-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5366-9603","last_name":"Erdös","first_name":"László"},{"id":"434AD0AE-F248-11E8-B48F-1D18A9856A87","full_name":"Schnelli, Kevin","first_name":"Kevin","last_name":"Schnelli","orcid":"0000-0003-0954-3231"}],"quality_controlled":"1","project":[{"_id":"258DCDE6-B435-11E9-9278-68D0E5697425","grant_number":"338804","name":"Random matrices, universality and disordered quantum systems","call_identifier":"FP7"}],"oa_version":"Published Version","language":[{"iso":"eng"}],"volume":349,"article_processing_charge":"Yes (via OA deal)","month":"02","has_accepted_license":"1","file":[{"relation":"main_file","file_size":1033743,"access_level":"open_access","creator":"system","file_id":"5102","checksum":"ddff79154c3daf27237de5383b1264a9","date_updated":"2020-07-14T12:44:39Z","date_created":"2018-12-12T10:14:47Z","content_type":"application/pdf","file_name":"IST-2016-722-v1+1_s00220-016-2805-6.pdf"}],"issue":"3","publication_identifier":{"issn":["00103616"]},"status":"public","date_created":"2018-12-11T11:50:43Z","type":"journal_article","_id":"1207","ec_funded":1,"pubrep_id":"722"},{"department":[{"_id":"CaUh"}],"date_updated":"2023-09-20T11:17:21Z","citation":{"apa":"Zwiernik, P., Uhler, C., &#38; Richards, D. (2017). Maximum likelihood estimation for linear Gaussian covariance models. <i>Journal of the Royal Statistical Society. Series B: Statistical Methodology</i>. Wiley-Blackwell. <a href=\"https://doi.org/10.1111/rssb.12217\">https://doi.org/10.1111/rssb.12217</a>","ama":"Zwiernik P, Uhler C, Richards D. Maximum likelihood estimation for linear Gaussian covariance models. <i>Journal of the Royal Statistical Society Series B: Statistical Methodology</i>. 2017;79(4):1269-1292. doi:<a href=\"https://doi.org/10.1111/rssb.12217\">10.1111/rssb.12217</a>","chicago":"Zwiernik, Piotr, Caroline Uhler, and Donald Richards. “Maximum Likelihood Estimation for Linear Gaussian Covariance Models.” <i>Journal of the Royal Statistical Society. Series B: Statistical Methodology</i>. Wiley-Blackwell, 2017. <a href=\"https://doi.org/10.1111/rssb.12217\">https://doi.org/10.1111/rssb.12217</a>.","ista":"Zwiernik P, Uhler C, Richards D. 2017. Maximum likelihood estimation for linear Gaussian covariance models. Journal of the Royal Statistical Society. Series B: Statistical Methodology. 79(4), 1269–1292.","ieee":"P. Zwiernik, C. Uhler, and D. Richards, “Maximum likelihood estimation for linear Gaussian covariance models,” <i>Journal of the Royal Statistical Society. Series B: Statistical Methodology</i>, vol. 79, no. 4. Wiley-Blackwell, pp. 1269–1292, 2017.","short":"P. Zwiernik, C. Uhler, D. Richards, Journal of the Royal Statistical Society. Series B: Statistical Methodology 79 (2017) 1269–1292.","mla":"Zwiernik, Piotr, et al. “Maximum Likelihood Estimation for Linear Gaussian Covariance Models.” <i>Journal of the Royal Statistical Society. Series B: Statistical Methodology</i>, vol. 79, no. 4, Wiley-Blackwell, 2017, pp. 1269–92, doi:<a href=\"https://doi.org/10.1111/rssb.12217\">10.1111/rssb.12217</a>."},"external_id":{"isi":["000411712300012"]},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","publication_status":"published","abstract":[{"text":"We study parameter estimation in linear Gaussian covariance models, which are p-dimensional Gaussian models with linear constraints on the covariance matrix. Maximum likelihood estimation for this class of models leads to a non-convex optimization problem which typically has many local maxima. Using recent results on the asymptotic distribution of extreme eigenvalues of the Wishart distribution, we provide sufficient conditions for any hill climbing method to converge to the global maximum. Although we are primarily interested in the case in which n≫p, the proofs of our results utilize large sample asymptotic theory under the scheme n/p→γ&gt;1. Remarkably, our numerical simulations indicate that our results remain valid for p as small as 2. An important consequence of this analysis is that, for sample sizes n≃14p, maximum likelihood estimation for linear Gaussian covariance models behaves as if it were a convex optimization problem. © 2016 The Royal Statistical Society and Blackwell Publishing Ltd.","lang":"eng"}],"isi":1,"date_published":"2017-09-01T00:00:00Z","publisher":"Wiley-Blackwell","title":"Maximum likelihood estimation for linear Gaussian covariance models","oa":1,"day":"01","doi":"10.1111/rssb.12217","year":"2017","page":"1269 - 1292","scopus_import":"1","publist_id":"6142","intvolume":"        79","publication":"Journal of the Royal Statistical Society. Series B: Statistical Methodology","project":[{"grant_number":"Y 903-N35","_id":"2530CA10-B435-11E9-9278-68D0E5697425","name":"Gaussian Graphical Models: Theory and Applications","call_identifier":"FWF"}],"quality_controlled":"1","oa_version":"Submitted Version","author":[{"full_name":"Zwiernik, Piotr","first_name":"Piotr","last_name":"Zwiernik"},{"last_name":"Uhler","first_name":"Caroline","orcid":"0000-0002-7008-0216","id":"49ADD78E-F248-11E8-B48F-1D18A9856A87","full_name":"Uhler, Caroline"},{"last_name":"Richards","first_name":"Donald","full_name":"Richards, Donald"}],"month":"09","issue":"4","language":[{"iso":"eng"}],"volume":79,"article_processing_charge":"No","date_created":"2018-12-11T11:50:43Z","type":"journal_article","_id":"1208","publication_identifier":{"issn":["13697412"]},"main_file_link":[{"url":"https://arxiv.org/abs/1408.5604","open_access":"1"}],"status":"public"},{"acknowledgement":"This work was supported by the family of late G. Robinson, Jr. and NSF Grant DMS-1211827. ","doi":"10.1007/s10955-016-1672-z","year":"2017","page":"636-655","day":"01","oa":1,"intvolume":"       167","publist_id":"6136","publication":"Journal of Statistical Physics","scopus_import":1,"user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","date_updated":"2021-01-12T06:49:07Z","department":[{"_id":"BjHo"}],"citation":{"ieee":"N. B. Budanur and P. Cvitanović, “Unstable manifolds of relative periodic orbits in the symmetry reduced state space of the Kuramoto–Sivashinsky system,” <i>Journal of Statistical Physics</i>, vol. 167, no. 3–4. Springer, pp. 636–655, 2017.","chicago":"Budanur, Nazmi B, and Predrag Cvitanović. “Unstable Manifolds of Relative Periodic Orbits in the Symmetry Reduced State Space of the Kuramoto–Sivashinsky System.” <i>Journal of Statistical Physics</i>. Springer, 2017. <a href=\"https://doi.org/10.1007/s10955-016-1672-z\">https://doi.org/10.1007/s10955-016-1672-z</a>.","ama":"Budanur NB, Cvitanović P. Unstable manifolds of relative periodic orbits in the symmetry reduced state space of the Kuramoto–Sivashinsky system. <i>Journal of Statistical Physics</i>. 2017;167(3-4):636-655. doi:<a href=\"https://doi.org/10.1007/s10955-016-1672-z\">10.1007/s10955-016-1672-z</a>","ista":"Budanur NB, Cvitanović P. 2017. Unstable manifolds of relative periodic orbits in the symmetry reduced state space of the Kuramoto–Sivashinsky system. Journal of Statistical Physics. 167(3–4), 636–655.","apa":"Budanur, N. B., &#38; Cvitanović, P. (2017). Unstable manifolds of relative periodic orbits in the symmetry reduced state space of the Kuramoto–Sivashinsky system. <i>Journal of Statistical Physics</i>. Springer. <a href=\"https://doi.org/10.1007/s10955-016-1672-z\">https://doi.org/10.1007/s10955-016-1672-z</a>","short":"N.B. Budanur, P. Cvitanović, Journal of Statistical Physics 167 (2017) 636–655.","mla":"Budanur, Nazmi B., and Predrag Cvitanović. “Unstable Manifolds of Relative Periodic Orbits in the Symmetry Reduced State Space of the Kuramoto–Sivashinsky System.” <i>Journal of Statistical Physics</i>, vol. 167, no. 3–4, Springer, 2017, pp. 636–55, doi:<a href=\"https://doi.org/10.1007/s10955-016-1672-z\">10.1007/s10955-016-1672-z</a>."},"publisher":"Springer","file_date_updated":"2020-07-14T12:44:39Z","date_published":"2017-05-01T00:00:00Z","title":"Unstable manifolds of relative periodic orbits in the symmetry reduced state space of the Kuramoto–Sivashinsky system","abstract":[{"text":"Systems such as fluid flows in channels and pipes or the complex Ginzburg–Landau system, defined over periodic domains, exhibit both continuous symmetries, translational and rotational, as well as discrete symmetries under spatial reflections or complex conjugation. The simplest, and very common symmetry of this type is the equivariance of the defining equations under the orthogonal group O(2). We formulate a novel symmetry reduction scheme for such systems by combining the method of slices with invariant polynomial methods, and show how it works by applying it to the Kuramoto–Sivashinsky system in one spatial dimension. As an example, we track a relative periodic orbit through a sequence of bifurcations to the onset of chaos. Within the symmetry-reduced state space we are able to compute and visualize the unstable manifolds of relative periodic orbits, their torus bifurcations, a transition to chaos via torus breakdown, and heteroclinic connections between various relative periodic orbits. It would be very hard to carry through such analysis in the full state space, without a symmetry reduction such as the one we present here.","lang":"eng"}],"publication_status":"published","ddc":["530"],"status":"public","date_created":"2018-12-11T11:50:44Z","_id":"1211","type":"journal_article","pubrep_id":"782","author":[{"full_name":"Budanur, Nazmi B","id":"3EA1010E-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-0423-5010","first_name":"Nazmi B","last_name":"Budanur"},{"full_name":"Cvitanović, Predrag","last_name":"Cvitanović","first_name":"Predrag"}],"quality_controlled":"1","oa_version":"Submitted Version","language":[{"iso":"eng"}],"volume":167,"has_accepted_license":"1","month":"05","issue":"3-4","file":[{"relation":"main_file","access_level":"open_access","file_size":2820207,"file_id":"5319","checksum":"3e971d09eb167761aa0888ed415b0056","creator":"system","date_created":"2018-12-12T10:18:01Z","date_updated":"2020-07-14T12:44:39Z","content_type":"application/pdf","file_name":"IST-2017-782-v1+1_BudCvi15.pdf"}]},{"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","alternative_title":["Methods in Cell Biology"],"external_id":{"isi":["000403542900022"]},"citation":{"short":"N.S. Baranova, M. Loose, in:, A. Echard (Ed.), Cytokinesis, Academic Press, 2017, pp. 355–370.","mla":"Baranova, Natalia S., and Martin Loose. “Single-Molecule Measurements to Study Polymerization Dynamics of FtsZ-FtsA Copolymers.” <i>Cytokinesis</i>, edited by Arnaud  Echard, vol. 137, Academic Press, 2017, pp. 355–70, doi:<a href=\"https://doi.org/10.1016/bs.mcb.2016.03.036\">10.1016/bs.mcb.2016.03.036</a>.","ieee":"N. S. Baranova and M. Loose, “Single-molecule measurements to study polymerization dynamics of FtsZ-FtsA copolymers,” in <i>Cytokinesis</i>, vol. 137, A. Echard, Ed. Academic Press, 2017, pp. 355–370.","ama":"Baranova NS, Loose M. Single-molecule measurements to study polymerization dynamics of FtsZ-FtsA copolymers. In: Echard A, ed. <i>Cytokinesis</i>. Vol 137. Academic Press; 2017:355-370. doi:<a href=\"https://doi.org/10.1016/bs.mcb.2016.03.036\">10.1016/bs.mcb.2016.03.036</a>","ista":"Baranova NS, Loose M. 2017.Single-molecule measurements to study polymerization dynamics of FtsZ-FtsA copolymers. In: Cytokinesis. Methods in Cell Biology, vol. 137, 355–370.","chicago":"Baranova, Natalia S., and Martin Loose. “Single-Molecule Measurements to Study Polymerization Dynamics of FtsZ-FtsA Copolymers.” In <i>Cytokinesis</i>, edited by Arnaud  Echard, 137:355–70. Academic Press, 2017. <a href=\"https://doi.org/10.1016/bs.mcb.2016.03.036\">https://doi.org/10.1016/bs.mcb.2016.03.036</a>.","apa":"Baranova, N. S., &#38; Loose, M. (2017). Single-molecule measurements to study polymerization dynamics of FtsZ-FtsA copolymers. In A. Echard (Ed.), <i>Cytokinesis</i> (Vol. 137, pp. 355–370). Academic Press. <a href=\"https://doi.org/10.1016/bs.mcb.2016.03.036\">https://doi.org/10.1016/bs.mcb.2016.03.036</a>"},"date_updated":"2023-09-20T11:16:30Z","department":[{"_id":"MaLo"}],"title":"Single-molecule measurements to study polymerization dynamics of FtsZ-FtsA copolymers","date_published":"2017-12-01T00:00:00Z","publisher":"Academic Press","isi":1,"abstract":[{"text":"Bacterial cytokinesis is commonly initiated by the Z-ring, a dynamic cytoskeletal structure that assembles at the site of division. Its primary component is FtsZ, a tubulin-like GTPase, that like its eukaryotic relative forms protein filaments in the presence of GTP. Since the discovery of the Z-ring 25 years ago, various models for the role of FtsZ have been suggested. However, important information about the architecture and dynamics of FtsZ filaments during cytokinesis is still missing. One reason for this lack of knowledge has been the small size of bacteria, which has made it difficult to resolve the orientation and dynamics of individual FtsZ filaments in the Z-ring. While superresolution microscopy experiments have helped to gain more information about the organization of the Z-ring in the dividing cell, they were not yet able to elucidate a mechanism of how FtsZ filaments reorganize during assembly and disassembly of the Z-ring. In this chapter, we explain how to use an in vitro reconstitution approach to investigate the self-organization of FtsZ filaments recruited to a biomimetic lipid bilayer by its membrane anchor FtsA. We show how to perform single-molecule experiments to study the behavior of individual FtsZ monomers during the constant reorganization of the FtsZ-FtsA filament network. We describe how to analyze the dynamics of single molecules and explain why this information can help to shed light onto possible mechanism of Z-ring constriction. We believe that similar experimental approaches will be useful to study the mechanism of membrane-based polymerization of other cytoskeletal systems, not only from prokaryotic but also eukaryotic origin.","lang":"eng"}],"publication_status":"published","page":"355 - 370","year":"2017","day":"01","doi":"10.1016/bs.mcb.2016.03.036","acknowledgement":"Natalia Baranova is supported by an EMBO Long-Term Fellowship (EMBO ALTF 1163-2015) and Martin Loose by an ERC Starting Grant (ERCStG-2015-SelfOrganiCell).","publication":"Cytokinesis","intvolume":"       137","publist_id":"6134","scopus_import":"1","editor":[{"last_name":"Echard","first_name":"Arnaud ","full_name":"Echard, Arnaud "}],"author":[{"full_name":"Baranova, Natalia","id":"38661662-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-3086-9124","last_name":"Baranova","first_name":"Natalia"},{"orcid":"0000-0001-7309-9724","last_name":"Loose","first_name":"Martin","full_name":"Loose, Martin","id":"462D4284-F248-11E8-B48F-1D18A9856A87"}],"oa_version":"None","quality_controlled":"1","project":[{"grant_number":"ALTF 2015-1163","_id":"2596EAB6-B435-11E9-9278-68D0E5697425","name":"Synthesis of bacterial cell wall"},{"name":"International IST Postdoc Fellowship Programme","_id":"25681D80-B435-11E9-9278-68D0E5697425","grant_number":"291734","call_identifier":"FP7"}],"acknowledged_ssus":[{"_id":"Bio"}],"article_processing_charge":"No","volume":137,"language":[{"iso":"eng"}],"month":"12","status":"public","publication_identifier":{"issn":["0091679X"]},"type":"book_chapter","_id":"1213","date_created":"2018-12-11T11:50:45Z","ec_funded":1},{"status":"public","main_file_link":[{"url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7611288/","open_access":"1"}],"publication_identifier":{"eissn":["1546-1718"],"issn":["1061-4036"]},"date_created":"2023-01-16T09:18:05Z","article_type":"original","type":"journal_article","_id":"12193","language":[{"iso":"eng"}],"volume":50,"article_processing_charge":"No","month":"12","issue":"1","author":[{"full_name":"Walker, James","last_name":"Walker","first_name":"James"},{"full_name":"Gao, Hongbo","first_name":"Hongbo","last_name":"Gao"},{"full_name":"Zhang, Jingyi","first_name":"Jingyi","last_name":"Zhang"},{"first_name":"Billy","last_name":"Aldridge","full_name":"Aldridge, Billy"},{"first_name":"Martin","last_name":"Vickers","full_name":"Vickers, Martin"},{"full_name":"Higgins, James D.","last_name":"Higgins","first_name":"James D."},{"orcid":"0000-0002-4008-1234","first_name":"Xiaoqi","last_name":"Feng","full_name":"Feng, Xiaoqi","id":"e0164712-22ee-11ed-b12a-d80fcdf35958"}],"quality_controlled":"1","oa_version":"None","intvolume":"        50","publication":"Nature Genetics","keyword":["Genetics"],"scopus_import":"1","acknowledgement":"We thank Daniel Zilberman for intellectual contributions to this work and assistance with manuscript preparation. We also thank Caroline Dean, Kirsten Bomblies, Vinod Kumar, Siobhan Brady and Sophien Kamoun for comments on the manuscript, Hugh Dickinson and Josephine Hellberg for developing the meiocyte isolation method, Giles Oldroyd for the pGWB13-Bar vector, Elisa Fiume for the pMDC107-NTF vector, Matthew Hartley, Matthew Couchman and Tjelvar Sten Gunnar Olsson for bioinformatics support, and the John Innes Centre Bioimaging Facility (Elaine Barclay and Grant Calder) for their assistance with microscopy. This work was funded by a Biotechnology and Biological Sciences Research Council (BBSRC) David Phillips Fellowship (BBL0250431) to X.F., a BBSRC grant (BBM01973X1) to J.H., and a Sainsbury PhD Studentship to J.W.","year":"2017","doi":"10.1038/s41588-017-0008-5","page":"130-137","day":"18","oa":1,"pmid":1,"date_published":"2017-12-18T00:00:00Z","publisher":"Nature Research","title":"Sexual-lineage-specific DNA methylation regulates meiosis in Arabidopsis","publication_status":"published","abstract":[{"text":"DNA methylation regulates eukaryotic gene expression and is extensively reprogrammed during animal development. However, whether developmental methylation reprogramming during the sporophytic life cycle of flowering plants regulates genes is presently unknown. Here we report a distinctive gene-targeted RNA-directed DNA methylation (RdDM) activity in the Arabidopsis thaliana male sexual lineage that regulates gene expression in meiocytes. Loss of sexual-lineage-specific RdDM causes mis-splicing of the MPS1 gene (also known as PRD2), thereby disrupting meiosis. Our results establish a regulatory paradigm in which de novo methylation creates a cell-lineage-specific epigenetic signature that controls gene expression and contributes to cellular function in flowering plants.","lang":"eng"}],"external_id":{"pmid":["29255257"]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","department":[{"_id":"XiFe"}],"date_updated":"2023-10-18T07:21:53Z","citation":{"ieee":"J. Walker <i>et al.</i>, “Sexual-lineage-specific DNA methylation regulates meiosis in Arabidopsis,” <i>Nature Genetics</i>, vol. 50, no. 1. Nature Research, pp. 130–137, 2017.","apa":"Walker, J., Gao, H., Zhang, J., Aldridge, B., Vickers, M., Higgins, J. D., &#38; Feng, X. (2017). Sexual-lineage-specific DNA methylation regulates meiosis in Arabidopsis. <i>Nature Genetics</i>. Nature Research. <a href=\"https://doi.org/10.1038/s41588-017-0008-5\">https://doi.org/10.1038/s41588-017-0008-5</a>","ista":"Walker J, Gao H, Zhang J, Aldridge B, Vickers M, Higgins JD, Feng X. 2017. Sexual-lineage-specific DNA methylation regulates meiosis in Arabidopsis. Nature Genetics. 50(1), 130–137.","ama":"Walker J, Gao H, Zhang J, et al. Sexual-lineage-specific DNA methylation regulates meiosis in Arabidopsis. <i>Nature Genetics</i>. 2017;50(1):130-137. doi:<a href=\"https://doi.org/10.1038/s41588-017-0008-5\">10.1038/s41588-017-0008-5</a>","chicago":"Walker, James, Hongbo Gao, Jingyi Zhang, Billy Aldridge, Martin Vickers, James D. Higgins, and Xiaoqi Feng. “Sexual-Lineage-Specific DNA Methylation Regulates Meiosis in Arabidopsis.” <i>Nature Genetics</i>. Nature Research, 2017. <a href=\"https://doi.org/10.1038/s41588-017-0008-5\">https://doi.org/10.1038/s41588-017-0008-5</a>.","mla":"Walker, James, et al. “Sexual-Lineage-Specific DNA Methylation Regulates Meiosis in Arabidopsis.” <i>Nature Genetics</i>, vol. 50, no. 1, Nature Research, 2017, pp. 130–37, doi:<a href=\"https://doi.org/10.1038/s41588-017-0008-5\">10.1038/s41588-017-0008-5</a>.","short":"J. Walker, H. Gao, J. Zhang, B. Aldridge, M. Vickers, J.D. Higgins, X. Feng, Nature Genetics 50 (2017) 130–137."}},{"publication_status":"published","abstract":[{"text":"Since 2006, reprogrammed cells have increasingly been used as a biomedical research technique in addition to neuro-psychiatric methods. These rapidly evolving techniques allow for the generation of neuronal sub-populations, and have sparked interest not only in monogenetic neuro-psychiatric diseases, but also in poly-genetic and poly-aetiological disorders such as schizophrenia (SCZ) and bipolar disorder (BPD). This review provides a summary of 19 publications on reprogrammed adult somatic cells derived from patients with SCZ, and five publications using this technique in patients with BPD. As both disorders are complex and heterogeneous, there is a plurality of hypotheses to be tested in vitro. In SCZ, data on alterations of dopaminergic transmission in vitro are sparse, despite the great explanatory power of the so-called DA hypothesis of SCZ. Some findings correspond to perturbations of cell energy metabolism, and observations in reprogrammed cells suggest neuro-developmental alterations. Some studies also report on the efficacy of medicinal compounds to revert alterations observed in cellular models. However, due to the paucity of replication studies, no comprehensive conclusions can be drawn from studies using reprogrammed cells at the present time. In the future, findings from cell culture methods need to be integrated with clinical, epidemiological, pharmacological and imaging data in order to generate a more comprehensive picture of SCZ and BPD.","lang":"eng"}],"isi":1,"ddc":["616"],"pmid":1,"file_date_updated":"2020-07-14T12:44:39Z","date_published":"2017-01-01T00:00:00Z","publisher":"Wiley-Blackwell","title":"Are reprogrammed cells a useful tool for studying dopamine dysfunction in psychotic disorders? A review of the current evidence","department":[{"_id":"GaNo"}],"date_updated":"2023-09-20T11:16:01Z","citation":{"mla":"Sauerzopf, Ulrich, et al. “Are Reprogrammed Cells a Useful Tool for Studying Dopamine Dysfunction in Psychotic Disorders? A Review of the Current Evidence.” <i>European Journal of Neuroscience</i>, vol. 45, no. 1, Wiley-Blackwell, 2017, pp. 45–57, doi:<a href=\"https://doi.org/10.1111/ejn.13418\">10.1111/ejn.13418</a>.","short":"U. Sauerzopf, R. Sacco, G. Novarino, M. Niello, A. Weidenauer, N. Praschak Rieder, H. Sitte, M. Willeit, European Journal of Neuroscience 45 (2017) 45–57.","ieee":"U. Sauerzopf <i>et al.</i>, “Are reprogrammed cells a useful tool for studying dopamine dysfunction in psychotic disorders? A review of the current evidence,” <i>European Journal of Neuroscience</i>, vol. 45, no. 1. Wiley-Blackwell, pp. 45–57, 2017.","ama":"Sauerzopf U, Sacco R, Novarino G, et al. Are reprogrammed cells a useful tool for studying dopamine dysfunction in psychotic disorders? A review of the current evidence. <i>European Journal of Neuroscience</i>. 2017;45(1):45-57. doi:<a href=\"https://doi.org/10.1111/ejn.13418\">10.1111/ejn.13418</a>","chicago":"Sauerzopf, Ulrich, Roberto Sacco, Gaia Novarino, Marco Niello, Ana Weidenauer, Nicole Praschak Rieder, Harald Sitte, and Matthaeus Willeit. “Are Reprogrammed Cells a Useful Tool for Studying Dopamine Dysfunction in Psychotic Disorders? A Review of the Current Evidence.” <i>European Journal of Neuroscience</i>. Wiley-Blackwell, 2017. <a href=\"https://doi.org/10.1111/ejn.13418\">https://doi.org/10.1111/ejn.13418</a>.","ista":"Sauerzopf U, Sacco R, Novarino G, Niello M, Weidenauer A, Praschak Rieder N, Sitte H, Willeit M. 2017. Are reprogrammed cells a useful tool for studying dopamine dysfunction in psychotic disorders? A review of the current evidence. European Journal of Neuroscience. 45(1), 45–57.","apa":"Sauerzopf, U., Sacco, R., Novarino, G., Niello, M., Weidenauer, A., Praschak Rieder, N., … Willeit, M. (2017). Are reprogrammed cells a useful tool for studying dopamine dysfunction in psychotic disorders? A review of the current evidence. <i>European Journal of Neuroscience</i>. Wiley-Blackwell. <a href=\"https://doi.org/10.1111/ejn.13418\">https://doi.org/10.1111/ejn.13418</a>"},"external_id":{"isi":["000392487100005"],"pmid":["27690184"]},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"scopus_import":"1","publist_id":"6106","intvolume":"        45","publication":"European Journal of Neuroscience","oa":1,"acknowledgement":"This work was supported by grants of the Austrian Science Fund (FWF) P23585B09 to M.W. and F3506 to H.H.S. and the “Wiener Wissenschafts-, Forschungs- und Technologiefonds” (Vienna Science and Technology Fund; WWTF) CS15-033 to M.W.","year":"2017","page":"45 - 57","doi":"10.1111/ejn.13418","day":"01","month":"01","has_accepted_license":"1","file":[{"date_updated":"2020-07-14T12:44:39Z","date_created":"2018-12-12T10:10:48Z","content_type":"application/pdf","file_name":"IST-2017-738-v1+1_Sauerzopf_et_al-2017-European_Journal_of_Neuroscience.pdf","relation":"main_file","file_size":169145,"access_level":"open_access","creator":"system","file_id":"4838","checksum":"c572cf02be8fbb7020cfcfb892182e4c"}],"issue":"1","language":[{"iso":"eng"}],"volume":45,"article_processing_charge":"No","quality_controlled":"1","oa_version":"Published Version","author":[{"full_name":"Sauerzopf, Ulrich","last_name":"Sauerzopf","first_name":"Ulrich"},{"full_name":"Sacco, Roberto","id":"42C9F57E-F248-11E8-B48F-1D18A9856A87","first_name":"Roberto","last_name":"Sacco"},{"full_name":"Novarino, Gaia","id":"3E57A680-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-7673-7178","last_name":"Novarino","first_name":"Gaia"},{"last_name":"Niello","first_name":"Marco","full_name":"Niello, Marco"},{"first_name":"Ana","last_name":"Weidenauer","full_name":"Weidenauer, Ana"},{"full_name":"Praschak Rieder, Nicole","first_name":"Nicole","last_name":"Praschak Rieder"},{"first_name":"Harald","last_name":"Sitte","full_name":"Sitte, Harald"},{"first_name":"Matthaeus","last_name":"Willeit","full_name":"Willeit, Matthaeus"}],"pubrep_id":"738","date_created":"2018-12-11T11:50:50Z","article_type":"review","type":"journal_article","_id":"1228","status":"public"},{"type":"conference_abstract","_id":"12905","date_created":"2023-05-05T12:58:53Z","oa":1,"status":"public","day":"03","year":"2017","main_file_link":[{"open_access":"1","url":"https://vsc.ac.at/fileadmin/user_upload/vsc/conferences/ahpc17/BOOKLET_AHPC17.pdf"}],"page":"28","publication":"AHPC17 – Austrian HPC Meeting 2017","conference":{"location":"Grundlsee, Austria","name":"AHPC: Austrian HPC Meeting","start_date":"2017-03-01","end_date":"2017-03-03"},"citation":{"short":"A. Schlögl, J. Kiss, in:, AHPC17 – Austrian HPC Meeting 2017, FSP Scientific Computing, 2017, p. 28.","mla":"Schlögl, Alois, and Janos Kiss. “Scientific Computing at IST Austria.” <i>AHPC17 – Austrian HPC Meeting 2017</i>, FSP Scientific Computing, 2017, p. 28.","apa":"Schlögl, A., &#38; Kiss, J. (2017). Scientific Computing at IST Austria. In <i>AHPC17 – Austrian HPC Meeting 2017</i> (p. 28). Grundlsee, Austria: FSP Scientific Computing.","ista":"Schlögl A, Kiss J. 2017. Scientific Computing at IST Austria. AHPC17 – Austrian HPC Meeting 2017. AHPC: Austrian HPC Meeting, 28.","chicago":"Schlögl, Alois, and Janos Kiss. “Scientific Computing at IST Austria.” In <i>AHPC17 – Austrian HPC Meeting 2017</i>, 28. FSP Scientific Computing, 2017.","ama":"Schlögl A, Kiss J. Scientific Computing at IST Austria. In: <i>AHPC17 – Austrian HPC Meeting 2017</i>. FSP Scientific Computing; 2017:28.","ieee":"A. Schlögl and J. Kiss, “Scientific Computing at IST Austria,” in <i>AHPC17 – Austrian HPC Meeting 2017</i>, Grundlsee, Austria, 2017, p. 28."},"oa_version":"Published Version","department":[{"_id":"ScienComp"}],"date_updated":"2023-05-16T07:22:23Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"id":"45BF87EE-F248-11E8-B48F-1D18A9856A87","full_name":"Schlögl, Alois","last_name":"Schlögl","first_name":"Alois","orcid":"0000-0002-5621-8100"},{"id":"3D3A06F8-F248-11E8-B48F-1D18A9856A87","full_name":"Kiss, Janos","first_name":"Janos","last_name":"Kiss"}],"ddc":["000"],"file":[{"access_level":"open_access","file_size":1005486,"checksum":"7bcc499479d4f4c5ce6c0071c24ca6c6","file_id":"12969","creator":"dernst","relation":"main_file","success":1,"file_name":"2017_AHPC_Schloegl.pdf","date_created":"2023-05-16T07:20:50Z","date_updated":"2023-05-16T07:20:50Z","content_type":"application/pdf"}],"month":"03","publication_status":"published","has_accepted_license":"1","title":"Scientific Computing at IST Austria","article_processing_charge":"No","date_published":"2017-03-03T00:00:00Z","file_date_updated":"2023-05-16T07:20:50Z","publisher":"FSP Scientific Computing","language":[{"iso":"eng"}]},{"department":[{"_id":"KrCh"}],"date_updated":"2023-09-20T11:15:31Z","citation":{"short":"T. Brázdil, K. Chatterjee, V. Forejt, A. Kučera, Journal of Computer and System Sciences 84 (2017) 144–170.","mla":"Brázdil, Tomáš, et al. “Trading Performance for Stability in Markov Decision Processes.” <i>Journal of Computer and System Sciences</i>, vol. 84, Elsevier, 2017, pp. 144–70, doi:<a href=\"https://doi.org/10.1016/j.jcss.2016.09.009\">10.1016/j.jcss.2016.09.009</a>.","apa":"Brázdil, T., Chatterjee, K., Forejt, V., &#38; Kučera, A. (2017). Trading performance for stability in Markov decision processes. <i>Journal of Computer and System Sciences</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jcss.2016.09.009\">https://doi.org/10.1016/j.jcss.2016.09.009</a>","ama":"Brázdil T, Chatterjee K, Forejt V, Kučera A. Trading performance for stability in Markov decision processes. <i>Journal of Computer and System Sciences</i>. 2017;84:144-170. doi:<a href=\"https://doi.org/10.1016/j.jcss.2016.09.009\">10.1016/j.jcss.2016.09.009</a>","ista":"Brázdil T, Chatterjee K, Forejt V, Kučera A. 2017. Trading performance for stability in Markov decision processes. Journal of Computer and System Sciences. 84, 144–170.","chicago":"Brázdil, Tomáš, Krishnendu Chatterjee, Vojtěch Forejt, and Antonín Kučera. “Trading Performance for Stability in Markov Decision Processes.” <i>Journal of Computer and System Sciences</i>. Elsevier, 2017. <a href=\"https://doi.org/10.1016/j.jcss.2016.09.009\">https://doi.org/10.1016/j.jcss.2016.09.009</a>.","ieee":"T. Brázdil, K. Chatterjee, V. Forejt, and A. Kučera, “Trading performance for stability in Markov decision processes,” <i>Journal of Computer and System Sciences</i>, vol. 84. Elsevier, pp. 144–170, 2017."},"external_id":{"isi":["000388430000011"]},"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","publication_status":"published","abstract":[{"text":"We study controller synthesis problems for finite-state Markov decision processes, where the objective is to optimize the expected mean-payoff performance and stability (also known as variability in the literature). We argue that the basic notion of expressing the stability using the statistical variance of the mean payoff is sometimes insufficient, and propose an alternative definition. We show that a strategy ensuring both the expected mean payoff and the variance below given bounds requires randomization and memory, under both the above definitions. We then show that the problem of finding such a strategy can be expressed as a set of constraints.","lang":"eng"}],"ddc":["004","006"],"isi":1,"publisher":"Elsevier","date_published":"2017-03-01T00:00:00Z","file_date_updated":"2020-07-14T12:44:42Z","title":"Trading performance for stability in Markov decision processes","oa":1,"doi":"10.1016/j.jcss.2016.09.009","day":"01","page":"144 - 170","year":"2017","scopus_import":"1","related_material":{"record":[{"status":"public","relation":"earlier_version","id":"2305"}]},"publist_id":"6009","intvolume":"        84","publication":"Journal of Computer and System Sciences","quality_controlled":"1","project":[{"call_identifier":"FWF","grant_number":"P 23499-N23","_id":"2584A770-B435-11E9-9278-68D0E5697425","name":"Modern Graph Algorithmic Techniques in Formal Verification"},{"grant_number":"S11407","_id":"25863FF4-B435-11E9-9278-68D0E5697425","name":"Game Theory","call_identifier":"FWF"},{"call_identifier":"FP7","name":"Quantitative Graph Games: Theory and Applications","grant_number":"279307","_id":"2581B60A-B435-11E9-9278-68D0E5697425"},{"name":"Microsoft Research Faculty Fellowship","_id":"2587B514-B435-11E9-9278-68D0E5697425"}],"oa_version":"Published Version","author":[{"full_name":"Brázdil, Tomáš","first_name":"Tomáš","last_name":"Brázdil"},{"orcid":"0000-0002-4561-241X","first_name":"Krishnendu","last_name":"Chatterjee","full_name":"Chatterjee, Krishnendu","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Forejt, Vojtěch","last_name":"Forejt","first_name":"Vojtěch"},{"last_name":"Kučera","first_name":"Antonín","full_name":"Kučera, Antonín"}],"has_accepted_license":"1","month":"03","file":[{"relation":"main_file","checksum":"91271b23cf884d7c06d33bef0cd623b1","file_id":"4885","creator":"system","access_level":"open_access","file_size":708657,"content_type":"application/pdf","date_created":"2018-12-12T10:11:30Z","date_updated":"2020-07-14T12:44:42Z","file_name":"IST-2016-717-v1+1_1-s2.0-S0022000016300897-main.pdf"}],"language":[{"iso":"eng"}],"volume":84,"article_processing_charge":"No","date_created":"2018-12-11T11:51:12Z","type":"journal_article","_id":"1294","status":"public","pubrep_id":"717","ec_funded":1},{"article_processing_charge":"No","title":"Data from: Ret and Etv4 promote directed movements of progenitor cells during renal branching morphogenesis","date_published":"2017-01-14T00:00:00Z","publisher":"Dryad","abstract":[{"text":"Branching morphogenesis of the epithelial ureteric bud forms the renal collecting duct system and is critical for normal nephron number, while low nephron number is implicated in hypertension and renal disease. Ureteric bud growth and branching requires GDNF signaling from the surrounding mesenchyme to cells at the ureteric bud tips, via the Ret receptor tyrosine kinase and coreceptor Gfrα1; Ret signaling up-regulates transcription factors Etv4 and Etv5, which are also critical for branching. Despite extensive knowledge of the genetic control of these events, it is not understood, at the cellular level, how renal branching morphogenesis is achieved or how Ret signaling influences epithelial cell behaviors to promote this process. Analysis of chimeric embryos previously suggested a role for Ret signaling in promoting cell rearrangements in the nephric duct, but this method was unsuited to study individual cell behaviors during ureteric bud branching. Here, we use Mosaic Analysis with Double Markers (MADM), combined with organ culture and time-lapse imaging, to trace the movements and divisions of individual ureteric bud tip cells. We first examine wild-type clones and then Ret or Etv4 mutant/wild-type clones in which the mutant and wild-type sister cells are differentially and heritably marked by green and red fluorescent proteins. We find that, in normal kidneys, most individual tip cells behave as self-renewing progenitors, some of whose progeny remain at the tips while others populate the growing UB trunks. In Ret or Etv4 MADM clones, the wild-type cells generated at a UB tip are much more likely to remain at, or move to, the new tips during branching and elongation, while their Ret−/− or Etv4−/− sister cells tend to lag behind and contribute only to the trunks. By tracking successive mitoses in a cell lineage, we find that Ret signaling has little effect on proliferation, in contrast to its effects on cell movement. Our results show that Ret/Etv4 signaling promotes directed cell movements in the ureteric bud tips, and suggest a model in which these cell movements mediate branching morphogenesis.","lang":"eng"}],"month":"01","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","author":[{"full_name":"Riccio, Paul","last_name":"Riccio","first_name":"Paul"},{"first_name":"Christina","last_name":"Cebrián","full_name":"Cebrián, Christina"},{"full_name":"Zong, Hui","last_name":"Zong","first_name":"Hui"},{"full_name":"Hippenmeyer, Simon","id":"37B36620-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-2279-1061","last_name":"Hippenmeyer","first_name":"Simon"},{"full_name":"Costantini, Frank","last_name":"Costantini","first_name":"Frank"}],"oa_version":"Published Version","citation":{"apa":"Riccio, P., Cebrián, C., Zong, H., Hippenmeyer, S., &#38; Costantini, F. (2017). Data from: Ret and Etv4 promote directed movements of progenitor cells during renal branching morphogenesis. Dryad. <a href=\"https://doi.org/10.5061/dryad.pk16b\">https://doi.org/10.5061/dryad.pk16b</a>","chicago":"Riccio, Paul, Christina Cebrián, Hui Zong, Simon Hippenmeyer, and Frank Costantini. “Data from: Ret and Etv4 Promote Directed Movements of Progenitor Cells during Renal Branching Morphogenesis.” Dryad, 2017. <a href=\"https://doi.org/10.5061/dryad.pk16b\">https://doi.org/10.5061/dryad.pk16b</a>.","ama":"Riccio P, Cebrián C, Zong H, Hippenmeyer S, Costantini F. Data from: Ret and Etv4 promote directed movements of progenitor cells during renal branching morphogenesis. 2017. doi:<a href=\"https://doi.org/10.5061/dryad.pk16b\">10.5061/dryad.pk16b</a>","ista":"Riccio P, Cebrián C, Zong H, Hippenmeyer S, Costantini F. 2017. Data from: Ret and Etv4 promote directed movements of progenitor cells during renal branching morphogenesis, Dryad, <a href=\"https://doi.org/10.5061/dryad.pk16b\">10.5061/dryad.pk16b</a>.","ieee":"P. Riccio, C. Cebrián, H. Zong, S. Hippenmeyer, and F. Costantini, “Data from: Ret and Etv4 promote directed movements of progenitor cells during renal branching morphogenesis.” Dryad, 2017.","short":"P. Riccio, C. Cebrián, H. Zong, S. Hippenmeyer, F. Costantini, (2017).","mla":"Riccio, Paul, et al. <i>Data from: Ret and Etv4 Promote Directed Movements of Progenitor Cells during Renal Branching Morphogenesis</i>. Dryad, 2017, doi:<a href=\"https://doi.org/10.5061/dryad.pk16b\">10.5061/dryad.pk16b</a>."},"date_updated":"2022-08-25T13:34:55Z","department":[{"_id":"SiHi"}],"related_material":{"record":[{"status":"deleted","relation":"used_in_publication","id":"9702"}]},"doi":"10.5061/dryad.pk16b","main_file_link":[{"url":"https://doi.org/10.5061/dryad.pk16b","open_access":"1"}],"status":"public","year":"2017","day":"14","_id":"9707","type":"research_data_reference","oa":1,"date_created":"2021-07-23T09:39:34Z"},{"title":"Data from: Error-robust modes of the retinal population code","article_processing_charge":"No","date_published":"2017-10-18T00:00:00Z","publisher":"Dryad","month":"10","abstract":[{"text":"Across the nervous system, certain population spiking patterns are observed far more frequently than others. A hypothesis about this structure is that these collective activity patterns function as population codewords–collective modes–carrying information distinct from that of any single cell. We investigate this phenomenon in recordings of ∼150 retinal ganglion cells, the retina’s output. We develop a novel statistical model that decomposes the population response into modes; it predicts the distribution of spiking activity in the ganglion cell population with high accuracy. We found that the modes represent localized features of the visual stimulus that are distinct from the features represented by single neurons. Modes form clusters of activity states that are readily discriminated from one another. When we repeated the same visual stimulus, we found that the same mode was robustly elicited. These results suggest that retinal ganglion cells’ collective signaling is endowed with a form of error-correcting code–a principle that may hold in brain areas beyond retina.","lang":"eng"}],"user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","author":[{"full_name":"Prentice, Jason","last_name":"Prentice","first_name":"Jason"},{"last_name":"Marre","first_name":"Olivier","full_name":"Marre, Olivier"},{"first_name":"Mark","last_name":"Ioffe","full_name":"Ioffe, Mark"},{"first_name":"Adrianna","last_name":"Loback","full_name":"Loback, Adrianna"},{"id":"3D494DCA-F248-11E8-B48F-1D18A9856A87","full_name":"Tkačik, Gašper","last_name":"Tkačik","first_name":"Gašper","orcid":"0000-0002-6699-1455"},{"first_name":"Michael","last_name":"Berry","full_name":"Berry, Michael"}],"oa_version":"Published Version","citation":{"mla":"Prentice, Jason, et al. <i>Data from: Error-Robust Modes of the Retinal Population Code</i>. Dryad, 2017, doi:<a href=\"https://doi.org/10.5061/dryad.1f1rc\">10.5061/dryad.1f1rc</a>.","short":"J. Prentice, O. Marre, M. Ioffe, A. Loback, G. Tkačik, M. Berry, (2017).","ieee":"J. Prentice, O. Marre, M. Ioffe, A. Loback, G. Tkačik, and M. Berry, “Data from: Error-robust modes of the retinal population code.” Dryad, 2017.","apa":"Prentice, J., Marre, O., Ioffe, M., Loback, A., Tkačik, G., &#38; Berry, M. (2017). Data from: Error-robust modes of the retinal population code. Dryad. <a href=\"https://doi.org/10.5061/dryad.1f1rc\">https://doi.org/10.5061/dryad.1f1rc</a>","chicago":"Prentice, Jason, Olivier Marre, Mark Ioffe, Adrianna Loback, Gašper Tkačik, and Michael Berry. “Data from: Error-Robust Modes of the Retinal Population Code.” Dryad, 2017. <a href=\"https://doi.org/10.5061/dryad.1f1rc\">https://doi.org/10.5061/dryad.1f1rc</a>.","ama":"Prentice J, Marre O, Ioffe M, Loback A, Tkačik G, Berry M. Data from: Error-robust modes of the retinal population code. 2017. doi:<a href=\"https://doi.org/10.5061/dryad.1f1rc\">10.5061/dryad.1f1rc</a>","ista":"Prentice J, Marre O, Ioffe M, Loback A, Tkačik G, Berry M. 2017. Data from: Error-robust modes of the retinal population code, Dryad, <a href=\"https://doi.org/10.5061/dryad.1f1rc\">10.5061/dryad.1f1rc</a>."},"department":[{"_id":"GaTk"}],"date_updated":"2023-02-21T16:34:41Z","related_material":{"record":[{"relation":"used_in_publication","id":"1197","status":"public"}]},"doi":"10.5061/dryad.1f1rc","status":"public","day":"18","year":"2017","main_file_link":[{"open_access":"1","url":"https://doi.org/10.5061/dryad.1f1rc"}],"_id":"9709","type":"research_data_reference","oa":1,"date_created":"2021-07-23T11:34:34Z"},{"abstract":[{"text":"Mathematica notebooks used to generate figures.","lang":"eng"}],"month":"12","article_processing_charge":"No","title":"Data for: Establishment in a new habitat by polygenic adaptation","date_published":"2017-12-29T00:00:00Z","publisher":"Mendeley Data","citation":{"short":"A. Etheridge, N.H. Barton, (2017).","mla":"Etheridge, Alison, and Nicholas H. Barton. <i>Data for: Establishment in a New Habitat by Polygenic Adaptation</i>. Mendeley Data, 2017, doi:<a href=\"https://doi.org/10.17632/nw68fxzjpm.1\">10.17632/nw68fxzjpm.1</a>.","ieee":"A. Etheridge and N. H. Barton, “Data for: Establishment in a new habitat by polygenic adaptation.” Mendeley Data, 2017.","apa":"Etheridge, A., &#38; Barton, N. H. (2017). Data for: Establishment in a new habitat by polygenic adaptation. Mendeley Data. <a href=\"https://doi.org/10.17632/nw68fxzjpm.1\">https://doi.org/10.17632/nw68fxzjpm.1</a>","chicago":"Etheridge, Alison, and Nicholas H Barton. “Data for: Establishment in a New Habitat by Polygenic Adaptation.” Mendeley Data, 2017. <a href=\"https://doi.org/10.17632/nw68fxzjpm.1\">https://doi.org/10.17632/nw68fxzjpm.1</a>.","ista":"Etheridge A, Barton NH. 2017. Data for: Establishment in a new habitat by polygenic adaptation, Mendeley Data, <a href=\"https://doi.org/10.17632/nw68fxzjpm.1\">10.17632/nw68fxzjpm.1</a>.","ama":"Etheridge A, Barton NH. 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Public Library of Science, 2017, doi:<a href=\"https://doi.org/10.1371/journal.pcbi.1005609.s004\">10.1371/journal.pcbi.1005609.s004</a>."},"oa_version":"Published Version","department":[{"_id":"ToBo"},{"_id":"CaGu"},{"_id":"NiBa"}],"date_updated":"2023-02-23T12:55:39Z","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","author":[{"orcid":"0000-0002-2519-8004","first_name":"Marta","last_name":"Lukacisinova","full_name":"Lukacisinova, Marta","id":"4342E402-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Sebastian","last_name":"Novak","full_name":"Novak, Sebastian","id":"461468AE-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Tiago","last_name":"Paixao","orcid":"0000-0003-2361-3953","id":"2C5658E6-F248-11E8-B48F-1D18A9856A87","full_name":"Paixao, Tiago"}],"month":"07","abstract":[{"text":"We show how different combination strategies affect the fraction of individuals that are multi-resistant.","lang":"eng"}],"title":"Resistance frequencies for different combination strategies","article_processing_charge":"No","date_published":"2017-07-18T00:00:00Z","publisher":"Public Library of Science"},{"department":[{"_id":"SyCr"}],"date_updated":"2023-09-26T15:45:47Z","citation":{"short":"J. Giehr, A.V. Grasse, S. Cremer, J. Heinze, A. Schrempf, (2017).","mla":"Giehr, Julia, et al. <i>Raw Data from Ant Queens Increase Their Reproductive Efforts after Pathogen Infection</i>. The Royal Society, 2017, doi:<a href=\"https://doi.org/10.6084/m9.figshare.5117788.v1\">10.6084/m9.figshare.5117788.v1</a>.","ieee":"J. Giehr, A. V. Grasse, S. Cremer, J. Heinze, and A. Schrempf, “Raw data from ant queens increase their reproductive efforts after pathogen infection.” The Royal Society, 2017.","apa":"Giehr, J., Grasse, A. V., Cremer, S., Heinze, J., &#38; Schrempf, A. (2017). Raw data from ant queens increase their reproductive efforts after pathogen infection. The Royal Society. <a href=\"https://doi.org/10.6084/m9.figshare.5117788.v1\">https://doi.org/10.6084/m9.figshare.5117788.v1</a>","chicago":"Giehr, Julia, Anna V Grasse, Sylvia Cremer, Jürgen Heinze, and Alexandra Schrempf. “Raw Data from Ant Queens Increase Their Reproductive Efforts after Pathogen Infection.” The Royal Society, 2017. <a href=\"https://doi.org/10.6084/m9.figshare.5117788.v1\">https://doi.org/10.6084/m9.figshare.5117788.v1</a>.","ama":"Giehr J, Grasse AV, Cremer S, Heinze J, Schrempf A. Raw data from ant queens increase their reproductive efforts after pathogen infection. 2017. doi:<a href=\"https://doi.org/10.6084/m9.figshare.5117788.v1\">10.6084/m9.figshare.5117788.v1</a>","ista":"Giehr J, Grasse AV, Cremer S, Heinze J, Schrempf A. 2017. Raw data from ant queens increase their reproductive efforts after pathogen infection, The Royal Society, <a href=\"https://doi.org/10.6084/m9.figshare.5117788.v1\">10.6084/m9.figshare.5117788.v1</a>."},"oa_version":"Published Version","author":[{"full_name":"Giehr, Julia","first_name":"Julia","last_name":"Giehr"},{"full_name":"Grasse, Anna V","id":"406F989C-F248-11E8-B48F-1D18A9856A87","first_name":"Anna V","last_name":"Grasse"},{"orcid":"0000-0002-2193-3868","last_name":"Cremer","first_name":"Sylvia","full_name":"Cremer, Sylvia","id":"2F64EC8C-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Heinze, Jürgen","first_name":"Jürgen","last_name":"Heinze"},{"full_name":"Schrempf, Alexandra","first_name":"Alexandra","last_name":"Schrempf"}],"user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","month":"06","abstract":[{"lang":"eng","text":"Egg laying rates and infection loads of C. obscurior queens"}],"date_published":"2017-06-19T00:00:00Z","publisher":"The Royal Society","title":"Raw data from ant queens increase their reproductive efforts after pathogen infection","article_processing_charge":"No","oa":1,"date_created":"2021-08-10T06:57:57Z","type":"research_data_reference","_id":"9853","main_file_link":[{"url":"https://doi.org/10.6084/m9.figshare.5117788.v1","open_access":"1"}],"doi":"10.6084/m9.figshare.5117788.v1","day":"19","status":"public","year":"2017","related_material":{"record":[{"id":"914","relation":"used_in_publication","status":"public"}]}}]