---
_id: '11182'
abstract:
- lang: eng
  text: Immune cells are constantly on the move through multicellular organisms to
    explore and respond to pathogens and other harmful insults. While moving, immune
    cells efficiently traverse microenvironments composed of tissue cells and extracellular
    fibers, which together form complex environments of various porosity, stiffness,
    topography, and chemical composition. In this protocol we describe experimental
    procedures to investigate immune cell migration through microenvironments of heterogeneous
    porosity. In particular, we describe micro-channels, micro-pillars, and collagen
    networks as cell migration paths with alternative pore size choices. Employing
    micro-channels or micro-pillars that divide at junctions into alternative paths
    with initially differentially sized pores allows us to precisely (1) measure the
    cellular translocation time through these porous path junctions, (2) quantify
    the cellular preference for individual pore sizes, and (3) image cellular components
    like the nucleus and the cytoskeleton. This reductionistic experimental setup
    thus can elucidate how immune cells perform decisions in complex microenvironments
    of various porosity like the interstitium. The setup further allows investigation
    of the underlying forces of cellular squeezing and the consequences of cellular
    deformation on the integrity of the cell and its organelles. As a complementary
    approach that does not require any micro-engineering expertise, we describe the
    usage of three-dimensional collagen networks with different pore sizes. Whereas
    we here focus on dendritic cells as a model for motile immune cells, the described
    protocols are versatile as they are also applicable for other immune cell types
    like neutrophils and non-immune cell types such as mesenchymal and cancer cells.
    In summary, we here describe protocols to identify the mechanisms and principles
    of cellular probing, decision making, and squeezing during cellular movement through
    microenvironments of heterogeneous porosity.
acknowledgement: "We thank Kasia Stefanowski for excellent technical assistance, and
  the Core Facility Bioimaging of the Biomedical Center (BMC) of the Ludwig-Maximilian
  University for excellent support. We gratefully acknowledge financial support from
  the Peter Hans Hofschneider Professorship of the Stiftung Experimentelle Biomedizin
  (to J.R), from the DFG (Collaborative Research Center SFB914, project A12; and Priority
  Programme SPP2332, project 492014049; both to J.R) and from the LMU Institutional
  Strategy LMU-Excellent within the framework of the German Excellence Initiative
  (to J.R).\r\nOpen access funding enabled and organized by Projekt DEAL."
article_number: e407
article_processing_charge: No
article_type: original
author:
- first_name: Janina
  full_name: Kroll, Janina
  last_name: Kroll
- first_name: Mauricio J.A.
  full_name: Ruiz-Fernandez, Mauricio J.A.
  last_name: Ruiz-Fernandez
- first_name: Malte B.
  full_name: Braun, Malte B.
  last_name: Braun
- first_name: Jack
  full_name: Merrin, Jack
  id: 4515C308-F248-11E8-B48F-1D18A9856A87
  last_name: Merrin
  orcid: 0000-0001-5145-4609
- first_name: Jörg
  full_name: Renkawitz, Jörg
  id: 3F0587C8-F248-11E8-B48F-1D18A9856A87
  last_name: Renkawitz
  orcid: 0000-0003-2856-3369
citation:
  ama: Kroll J, Ruiz-Fernandez MJA, Braun MB, Merrin J, Renkawitz J. Quantifying the
    probing and selection of microenvironmental pores by motile immune cells. <i>Current
    Protocols</i>. 2022;2(4). doi:<a href="https://doi.org/10.1002/cpz1.407">10.1002/cpz1.407</a>
  apa: Kroll, J., Ruiz-Fernandez, M. J. A., Braun, M. B., Merrin, J., &#38; Renkawitz,
    J. (2022). Quantifying the probing and selection of microenvironmental pores by
    motile immune cells. <i>Current Protocols</i>. Wiley. <a href="https://doi.org/10.1002/cpz1.407">https://doi.org/10.1002/cpz1.407</a>
  chicago: Kroll, Janina, Mauricio J.A. Ruiz-Fernandez, Malte B. Braun, Jack Merrin,
    and Jörg Renkawitz. “Quantifying the Probing and Selection of Microenvironmental
    Pores by Motile Immune Cells.” <i>Current Protocols</i>. Wiley, 2022. <a href="https://doi.org/10.1002/cpz1.407">https://doi.org/10.1002/cpz1.407</a>.
  ieee: J. Kroll, M. J. A. Ruiz-Fernandez, M. B. Braun, J. Merrin, and J. Renkawitz,
    “Quantifying the probing and selection of microenvironmental pores by motile immune
    cells,” <i>Current Protocols</i>, vol. 2, no. 4. Wiley, 2022.
  ista: Kroll J, Ruiz-Fernandez MJA, Braun MB, Merrin J, Renkawitz J. 2022. Quantifying
    the probing and selection of microenvironmental pores by motile immune cells.
    Current Protocols. 2(4), e407.
  mla: Kroll, Janina, et al. “Quantifying the Probing and Selection of Microenvironmental
    Pores by Motile Immune Cells.” <i>Current Protocols</i>, vol. 2, no. 4, e407,
    Wiley, 2022, doi:<a href="https://doi.org/10.1002/cpz1.407">10.1002/cpz1.407</a>.
  short: J. Kroll, M.J.A. Ruiz-Fernandez, M.B. Braun, J. Merrin, J. Renkawitz, Current
    Protocols 2 (2022).
date_created: 2022-04-17T22:01:46Z
date_published: 2022-04-05T00:00:00Z
date_updated: 2022-05-02T08:18:00Z
day: '05'
ddc:
- '570'
department:
- _id: NanoFab
doi: 10.1002/cpz1.407
external_id:
  pmid:
  - '35384410'
file:
- access_level: open_access
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  content_type: application/pdf
  creator: dernst
  date_created: 2022-05-02T08:16:10Z
  date_updated: 2022-05-02T08:16:10Z
  file_id: '11347'
  file_name: 2022_CurrentProtocols_Kroll.pdf
  file_size: 2142703
  relation: main_file
  success: 1
file_date_updated: 2022-05-02T08:16:10Z
has_accepted_license: '1'
intvolume: '         2'
issue: '4'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
pmid: 1
publication: Current Protocols
publication_identifier:
  eissn:
  - 2691-1299
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: Quantifying the probing and selection of microenvironmental pores by motile
  immune cells
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 2
year: '2022'
...
