---
_id: '10841'
abstract:
- lang: eng
  text: In eukaryotes, clathrin-coated vesicles (CCVs) facilitate the internalization
    of material from the cell surface as well as the movement of cargo in post-Golgi
    trafficking pathways. This diversity of functions is partially provided by multiple
    monomeric and multimeric clathrin adaptor complexes that provide compartment and
    cargo selectivity. The adaptor-protein assembly polypeptide-1 (AP-1) complex operates
    as part of the secretory pathway at the trans-Golgi network (TGN), while the AP-2
    complex and the TPLATE complex jointly operate at the plasma membrane to execute
    clathrin-mediated endocytosis. Key to our further understanding of clathrin-mediated
    trafficking in plants will be the comprehensive identification and characterization
    of the network of evolutionarily conserved and plant-specific core and accessory
    machinery involved in the formation and targeting of CCVs. To facilitate these
    studies, we have analyzed the proteome of enriched TGN/early endosome-derived
    and endocytic CCVs isolated from dividing and expanding suspension-cultured Arabidopsis
    (Arabidopsis thaliana) cells. Tandem mass spectrometry analysis results were validated
    by differential chemical labeling experiments to identify proteins co-enriching
    with CCVs. Proteins enriched in CCVs included previously characterized CCV components
    and cargos such as the vacuolar sorting receptors in addition to conserved and
    plant-specific components whose function in clathrin-mediated trafficking has
    not been previously defined. Notably, in addition to AP-1 and AP-2, all subunits
    of the AP-4 complex, but not AP-3 or AP-5, were found to be in high abundance
    in the CCV proteome. The association of AP-4 with suspension-cultured Arabidopsis
    CCVs is further supported via additional biochemical data.
acknowledged_ssus:
- _id: EM-Fac
acknowledgement: 'The authors would like to acknowledge the VIB Proteomics Core Facility
  (VIB-UGent Center for Medical Biotechnology in Ghent, Belgium) and the Research
  Technology Support Facility Proteomics Core (Michigan State University in East Lansing,
  Michigan) for sample analysis, as well as the University of Wisconsin Biotechnology
  Center Mass Spectrometry Core Facility (Madison, WI) for help with data processing.
  Additionally, we are grateful to Sue Weintraub (UT Health San Antonio) and Sydney
  Thomas (UW- Madison) for assistance with data analysis. This research was supported
  by grants to S.Y.B. from the National Science Foundation (Nos. 1121998 and 1614915)
  and a Vilas Associate Award (University of Wisconsin, Madison, Graduate School);
  to J.P. from the National Natural Science Foundation of China (Nos. 91754104, 31820103008,
  and 31670283); to I.H. from the National Research Foundation of Korea (No. 2019R1A2B5B03099982).
  This research was also supported by the Scientific Service Units (SSU) of IST Austria
  through resources provided by the Electron microscopy Facility (EMF). A.J. is supported
  by funding from the Austrian Science Fund (FWF): I3630B25 to J.F. A.H. is supported
  by funding from the National Science Foundation (NSF IOS Nos. 1025837 and 1147032).'
article_processing_charge: No
article_type: original
author:
- first_name: DA
  full_name: Dahhan, DA
  last_name: Dahhan
- first_name: GD
  full_name: Reynolds, GD
  last_name: Reynolds
- first_name: JJ
  full_name: Cárdenas, JJ
  last_name: Cárdenas
- first_name: D
  full_name: Eeckhout, D
  last_name: Eeckhout
- first_name: Alexander J
  full_name: Johnson, Alexander J
  id: 46A62C3A-F248-11E8-B48F-1D18A9856A87
  last_name: Johnson
  orcid: 0000-0002-2739-8843
- first_name: K
  full_name: Yperman, K
  last_name: Yperman
- first_name: Walter
  full_name: Kaufmann, Walter
  id: 3F99E422-F248-11E8-B48F-1D18A9856A87
  last_name: Kaufmann
  orcid: 0000-0001-9735-5315
- first_name: N
  full_name: Vang, N
  last_name: Vang
- first_name: X
  full_name: Yan, X
  last_name: Yan
- first_name: I
  full_name: Hwang, I
  last_name: Hwang
- first_name: A
  full_name: Heese, A
  last_name: Heese
- first_name: G
  full_name: De Jaeger, G
  last_name: De Jaeger
- first_name: Jiří
  full_name: Friml, Jiří
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: D
  full_name: Van Damme, D
  last_name: Van Damme
- first_name: J
  full_name: Pan, J
  last_name: Pan
- first_name: SY
  full_name: Bednarek, SY
  last_name: Bednarek
citation:
  ama: Dahhan D, Reynolds G, Cárdenas J, et al. Proteomic characterization of isolated
    Arabidopsis clathrin-coated vesicles reveals evolutionarily conserved and plant-specific
    components. <i>Plant Cell</i>. 2022;34(6):2150-2173. doi:<a href="https://doi.org/10.1093/plcell/koac071">10.1093/plcell/koac071</a>
  apa: Dahhan, D., Reynolds, G., Cárdenas, J., Eeckhout, D., Johnson, A. J., Yperman,
    K., … Bednarek, S. (2022). Proteomic characterization of isolated Arabidopsis
    clathrin-coated vesicles reveals evolutionarily conserved and plant-specific components.
    <i>Plant Cell</i>. Oxford Academic. <a href="https://doi.org/10.1093/plcell/koac071">https://doi.org/10.1093/plcell/koac071</a>
  chicago: Dahhan, DA, GD Reynolds, JJ Cárdenas, D Eeckhout, Alexander J Johnson,
    K Yperman, Walter Kaufmann, et al. “Proteomic Characterization of Isolated Arabidopsis
    Clathrin-Coated Vesicles Reveals Evolutionarily Conserved and Plant-Specific Components.”
    <i>Plant Cell</i>. Oxford Academic, 2022. <a href="https://doi.org/10.1093/plcell/koac071">https://doi.org/10.1093/plcell/koac071</a>.
  ieee: D. Dahhan <i>et al.</i>, “Proteomic characterization of isolated Arabidopsis
    clathrin-coated vesicles reveals evolutionarily conserved and plant-specific components,”
    <i>Plant Cell</i>, vol. 34, no. 6. Oxford Academic, pp. 2150–2173, 2022.
  ista: Dahhan D, Reynolds G, Cárdenas J, Eeckhout D, Johnson AJ, Yperman K, Kaufmann
    W, Vang N, Yan X, Hwang I, Heese A, De Jaeger G, Friml J, Van Damme D, Pan J,
    Bednarek S. 2022. Proteomic characterization of isolated Arabidopsis clathrin-coated
    vesicles reveals evolutionarily conserved and plant-specific components. Plant
    Cell. 34(6), 2150–2173.
  mla: Dahhan, DA, et al. “Proteomic Characterization of Isolated Arabidopsis Clathrin-Coated
    Vesicles Reveals Evolutionarily Conserved and Plant-Specific Components.” <i>Plant
    Cell</i>, vol. 34, no. 6, Oxford Academic, 2022, pp. 2150–73, doi:<a href="https://doi.org/10.1093/plcell/koac071">10.1093/plcell/koac071</a>.
  short: D. Dahhan, G. Reynolds, J. Cárdenas, D. Eeckhout, A.J. Johnson, K. Yperman,
    W. Kaufmann, N. Vang, X. Yan, I. Hwang, A. Heese, G. De Jaeger, J. Friml, D. Van
    Damme, J. Pan, S. Bednarek, Plant Cell 34 (2022) 2150–2173.
date_created: 2022-03-08T13:47:51Z
date_published: 2022-06-01T00:00:00Z
date_updated: 2023-08-02T14:46:48Z
day: '01'
department:
- _id: JiFr
- _id: EM-Fac
doi: 10.1093/plcell/koac071
external_id:
  isi:
  - '000767438800001'
  pmid:
  - '35218346'
intvolume: '        34'
isi: 1
issue: '6'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1101/2021.09.16.460678
month: '06'
oa: 1
oa_version: Preprint
page: 2150-2173
pmid: 1
project:
- _id: 26538374-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: I03630
  name: Molecular mechanisms of endocytic cargo recognition in plants
publication: Plant Cell
publication_identifier:
  eissn:
  - 1532-298x
  issn:
  - 1040-4651
publication_status: published
publisher: Oxford Academic
quality_controlled: '1'
scopus_import: '1'
status: public
title: Proteomic characterization of isolated Arabidopsis clathrin-coated vesicles
  reveals evolutionarily conserved and plant-specific components
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 34
year: '2022'
...
---
_id: '9443'
abstract:
- lang: eng
  text: Endoplasmic reticulum–plasma membrane contact sites (ER–PM CS) play fundamental
    roles in all eukaryotic cells. Arabidopsis thaliana mutants lacking the ER–PM
    protein tether synaptotagmin1 (SYT1) exhibit decreased PM integrity under multiple
    abiotic stresses, such as freezing, high salt, osmotic stress, and mechanical
    damage. Here, we show that, together with SYT1, the stress-induced SYT3 is an
    ER–PM tether that also functions in maintaining PM integrity. The ER–PM CS localization
    of SYT1 and SYT3 is dependent on PM phosphatidylinositol-4-phosphate and is regulated
    by abiotic stress. Lipidomic analysis revealed that cold stress increased the
    accumulation of diacylglycerol at the PM in a syt1/3 double mutant relative to
    wild-type while the levels of most glycerolipid species remain unchanged. In addition,
    the SYT1-green fluorescent protein fusion preferentially binds diacylglycerol
    in vivo with little affinity for polar glycerolipids. Our work uncovers a SYT-dependent
    mechanism of stress adaptation counteracting the detrimental accumulation of diacylglycerol
    at the PM produced during episodes of abiotic stress.
acknowledgement: "We would also like to thank Lothar Willmitzer for the lipidomic
  analysis at the Max Planck Institute of Molecular Plant Physiology (Potsdam, Germany).
  We thank Manuela Vega from SCI for her technical assistance in image analysis. We
  thank John R. Pearson and the Bionand Nanoimaging Unit, F. David Navas Fernández
  and the SCAI Imaging Facility and The Plant Cell Biology facility at the Shanghai
  Center for Plant Stress Biology for assistance with confocal microscopy. The FaFAH1
  clone was a gift from Iraida Amaya Saavedra (IFAPA-Centro de Churriana, Málaga,
  Spain). The AHA3 antibody against the H+-ATPase was a gift from Ramón Serrano Salom
  (Instituto de Biología Molecular y Celular de Plantas, Valencia, Spain). The MAP-mTU2-SAC1
  construct was provided by Yvon Jaillais (Laboratoire Reproduction et Développement
  des Plantes, Univ Lyon, France). The pGWB5 from the pGWB vector series, was provided
  by Tsuyoshi Nakagawa (Department of Molecular and Functional Genomics, Shimane University).
  We thank Plan Propio from the University of Málaga for financial support.\r\nFunding"
article_processing_charge: No
article_type: original
author:
- first_name: N
  full_name: Ruiz-Lopez, N
  last_name: Ruiz-Lopez
- first_name: J
  full_name: Pérez-Sancho, J
  last_name: Pérez-Sancho
- first_name: A
  full_name: Esteban Del Valle, A
  last_name: Esteban Del Valle
- first_name: RP
  full_name: Haslam, RP
  last_name: Haslam
- first_name: S
  full_name: Vanneste, S
  last_name: Vanneste
- first_name: R
  full_name: Catalá, R
  last_name: Catalá
- first_name: C
  full_name: Perea-Resa, C
  last_name: Perea-Resa
- first_name: D
  full_name: Van Damme, D
  last_name: Van Damme
- first_name: S
  full_name: García-Hernández, S
  last_name: García-Hernández
- first_name: A
  full_name: Albert, A
  last_name: Albert
- first_name: J
  full_name: Vallarino, J
  last_name: Vallarino
- first_name: J
  full_name: Lin, J
  last_name: Lin
- first_name: Jiří
  full_name: Friml, Jiří
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: AP
  full_name: Macho, AP
  last_name: Macho
- first_name: J
  full_name: Salinas, J
  last_name: Salinas
- first_name: A
  full_name: Rosado, A
  last_name: Rosado
- first_name: JA
  full_name: Napier, JA
  last_name: Napier
- first_name: V
  full_name: Amorim-Silva, V
  last_name: Amorim-Silva
- first_name: MA
  full_name: Botella, MA
  last_name: Botella
citation:
  ama: Ruiz-Lopez N, Pérez-Sancho J, Esteban Del Valle A, et al. Synaptotagmins at
    the endoplasmic reticulum-plasma membrane contact sites maintain diacylglycerol
    homeostasis during abiotic stress. <i>Plant Cell</i>. 2021;33(7):2431-2453. doi:<a
    href="https://doi.org/10.1093/plcell/koab122">10.1093/plcell/koab122</a>
  apa: Ruiz-Lopez, N., Pérez-Sancho, J., Esteban Del Valle, A., Haslam, R., Vanneste,
    S., Catalá, R., … Botella, M. (2021). Synaptotagmins at the endoplasmic reticulum-plasma
    membrane contact sites maintain diacylglycerol homeostasis during abiotic stress.
    <i>Plant Cell</i>. American Society of Plant Biologists. <a href="https://doi.org/10.1093/plcell/koab122">https://doi.org/10.1093/plcell/koab122</a>
  chicago: Ruiz-Lopez, N, J Pérez-Sancho, A Esteban Del Valle, RP Haslam, S Vanneste,
    R Catalá, C Perea-Resa, et al. “Synaptotagmins at the Endoplasmic Reticulum-Plasma
    Membrane Contact Sites Maintain Diacylglycerol Homeostasis during Abiotic Stress.”
    <i>Plant Cell</i>. American Society of Plant Biologists, 2021. <a href="https://doi.org/10.1093/plcell/koab122">https://doi.org/10.1093/plcell/koab122</a>.
  ieee: N. Ruiz-Lopez <i>et al.</i>, “Synaptotagmins at the endoplasmic reticulum-plasma
    membrane contact sites maintain diacylglycerol homeostasis during abiotic stress,”
    <i>Plant Cell</i>, vol. 33, no. 7. American Society of Plant Biologists, pp. 2431–2453,
    2021.
  ista: Ruiz-Lopez N, Pérez-Sancho J, Esteban Del Valle A, Haslam R, Vanneste S, Catalá
    R, Perea-Resa C, Van Damme D, García-Hernández S, Albert A, Vallarino J, Lin J,
    Friml J, Macho A, Salinas J, Rosado A, Napier J, Amorim-Silva V, Botella M. 2021.
    Synaptotagmins at the endoplasmic reticulum-plasma membrane contact sites maintain
    diacylglycerol homeostasis during abiotic stress. Plant Cell. 33(7), 2431–2453.
  mla: Ruiz-Lopez, N., et al. “Synaptotagmins at the Endoplasmic Reticulum-Plasma
    Membrane Contact Sites Maintain Diacylglycerol Homeostasis during Abiotic Stress.”
    <i>Plant Cell</i>, vol. 33, no. 7, American Society of Plant Biologists, 2021,
    pp. 2431–53, doi:<a href="https://doi.org/10.1093/plcell/koab122">10.1093/plcell/koab122</a>.
  short: N. Ruiz-Lopez, J. Pérez-Sancho, A. Esteban Del Valle, R. Haslam, S. Vanneste,
    R. Catalá, C. Perea-Resa, D. Van Damme, S. García-Hernández, A. Albert, J. Vallarino,
    J. Lin, J. Friml, A. Macho, J. Salinas, A. Rosado, J. Napier, V. Amorim-Silva,
    M. Botella, Plant Cell 33 (2021) 2431–2453.
date_created: 2021-06-02T13:13:58Z
date_published: 2021-07-01T00:00:00Z
date_updated: 2023-08-08T13:54:32Z
day: '01'
ddc:
- '580'
department:
- _id: JiFr
doi: 10.1093/plcell/koab122
ec_funded: 1
external_id:
  isi:
  - '000703938100026'
  pmid:
  - '33944955'
file:
- access_level: open_access
  checksum: 22d596678d00310d793611864a6d0fcd
  content_type: application/pdf
  creator: cchlebak
  date_created: 2021-10-14T13:36:38Z
  date_updated: 2021-10-14T13:36:38Z
  file_id: '10141'
  file_name: 2021_PlantCell_RuizLopez.pdf
  file_size: 2952028
  relation: main_file
  success: 1
file_date_updated: 2021-10-14T13:36:38Z
has_accepted_license: '1'
intvolume: '        33'
isi: 1
issue: '7'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
page: 2431-2453
pmid: 1
project:
- _id: 261099A6-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '742985'
  name: Tracing Evolution of Auxin Transport and Polarity in Plants
publication: Plant Cell
publication_identifier:
  eissn:
  - 1532-298x
  issn:
  - 1040-4651
publication_status: published
publisher: American Society of Plant Biologists
quality_controlled: '1'
scopus_import: '1'
status: public
title: Synaptotagmins at the endoplasmic reticulum-plasma membrane contact sites maintain
  diacylglycerol homeostasis during abiotic stress
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 33
year: '2021'
...
---
_id: '9657'
abstract:
- lang: eng
  text: To overcome nitrogen deficiency, legume roots establish symbiotic interactions
    with nitrogen-fixing rhizobia that is fostered in specialized organs (nodules).
    Similar to other organs, nodule formation is determined by a local maximum of
    the phytohormone auxin at the primordium site. However, how auxin regulates nodule
    development remains poorly understood. Here, we found that in soybean, (Glycine
    max), dynamic auxin transport driven by PIN-FORMED (PIN) transporter GmPIN1 is
    involved in nodule primordium formation. GmPIN1 was specifically expressed in
    nodule primordium cells and GmPIN1 was polarly localized in these cells. Two nodulation
    regulators, (iso)flavonoids trigger expanded distribution of GmPIN1b to root cortical
    cells, and cytokinin rearranges GmPIN1b polarity. Gmpin1abc triple mutants generated
    with CRISPR-Cas9 showed impaired establishment of auxin maxima in nodule meristems
    and aberrant divisions in the nodule primordium cells. Moreover, overexpression
    of GmPIN1 suppressed nodule primordium initiation. GmPIN9d, an ortholog of Arabidopsis
    thaliana PIN2, acts together with GmPIN1 later in nodule development to acropetally
    transport auxin in vascular bundles, fine-tuning the auxin supply for nodule enlargement.
    Our findings reveal how PIN-dependent auxin transport modulates different aspects
    of soybean nodule development and suggest that establishment of auxin gradient
    is a prerequisite for the proper interaction between legumes and rhizobia.
article_processing_charge: No
article_type: original
author:
- first_name: Z
  full_name: Gao, Z
  last_name: Gao
- first_name: Z
  full_name: Chen, Z
  last_name: Chen
- first_name: Y
  full_name: Cui, Y
  last_name: Cui
- first_name: M
  full_name: Ke, M
  last_name: Ke
- first_name: H
  full_name: Xu, H
  last_name: Xu
- first_name: Q
  full_name: Xu, Q
  last_name: Xu
- first_name: J
  full_name: Chen, J
  last_name: Chen
- first_name: Y
  full_name: Li, Y
  last_name: Li
- first_name: L
  full_name: Huang, L
  last_name: Huang
- first_name: H
  full_name: Zhao, H
  last_name: Zhao
- first_name: D
  full_name: Huang, D
  last_name: Huang
- first_name: S
  full_name: Mai, S
  last_name: Mai
- first_name: T
  full_name: Xu, T
  last_name: Xu
- first_name: X
  full_name: Liu, X
  last_name: Liu
- first_name: S
  full_name: Li, S
  last_name: Li
- first_name: Y
  full_name: Guan, Y
  last_name: Guan
- first_name: W
  full_name: Yang, W
  last_name: Yang
- first_name: Jiří
  full_name: Friml, Jiří
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: J
  full_name: Petrášek, J
  last_name: Petrášek
- first_name: J
  full_name: Zhang, J
  last_name: Zhang
- first_name: X
  full_name: Chen, X
  last_name: Chen
citation:
  ama: Gao Z, Chen Z, Cui Y, et al. GmPIN-dependent polar auxin transport is involved
    in soybean nodule development. <i>Plant Cell</i>. 2021;33(9):2981–3003. doi:<a
    href="https://doi.org/10.1093/plcell/koab183">10.1093/plcell/koab183</a>
  apa: Gao, Z., Chen, Z., Cui, Y., Ke, M., Xu, H., Xu, Q., … Chen, X. (2021). GmPIN-dependent
    polar auxin transport is involved in soybean nodule development. <i>Plant Cell</i>.
    American Society of Plant Biologists. <a href="https://doi.org/10.1093/plcell/koab183">https://doi.org/10.1093/plcell/koab183</a>
  chicago: Gao, Z, Z Chen, Y Cui, M Ke, H Xu, Q Xu, J Chen, et al. “GmPIN-Dependent
    Polar Auxin Transport Is Involved in Soybean Nodule Development.” <i>Plant Cell</i>.
    American Society of Plant Biologists, 2021. <a href="https://doi.org/10.1093/plcell/koab183">https://doi.org/10.1093/plcell/koab183</a>.
  ieee: Z. Gao <i>et al.</i>, “GmPIN-dependent polar auxin transport is involved in
    soybean nodule development,” <i>Plant Cell</i>, vol. 33, no. 9. American Society
    of Plant Biologists, pp. 2981–3003, 2021.
  ista: Gao Z, Chen Z, Cui Y, Ke M, Xu H, Xu Q, Chen J, Li Y, Huang L, Zhao H, Huang
    D, Mai S, Xu T, Liu X, Li S, Guan Y, Yang W, Friml J, Petrášek J, Zhang J, Chen
    X. 2021. GmPIN-dependent polar auxin transport is involved in soybean nodule development.
    Plant Cell. 33(9), 2981–3003.
  mla: Gao, Z., et al. “GmPIN-Dependent Polar Auxin Transport Is Involved in Soybean
    Nodule Development.” <i>Plant Cell</i>, vol. 33, no. 9, American Society of Plant
    Biologists, 2021, pp. 2981–3003, doi:<a href="https://doi.org/10.1093/plcell/koab183">10.1093/plcell/koab183</a>.
  short: Z. Gao, Z. Chen, Y. Cui, M. Ke, H. Xu, Q. Xu, J. Chen, Y. Li, L. Huang, H.
    Zhao, D. Huang, S. Mai, T. Xu, X. Liu, S. Li, Y. Guan, W. Yang, J. Friml, J. Petrášek,
    J. Zhang, X. Chen, Plant Cell 33 (2021) 2981–3003.
date_created: 2021-07-14T15:32:43Z
date_published: 2021-07-07T00:00:00Z
date_updated: 2023-08-10T14:01:41Z
day: '07'
ddc:
- '580'
department:
- _id: JiFr
doi: 10.1093/plcell/koab183
external_id:
  isi:
  - '000702165300012'
  pmid:
  - '34240197'
file:
- access_level: open_access
  checksum: 6715712ec306c321f0204c817b7f8ae7
  content_type: application/pdf
  creator: cziletti
  date_created: 2021-07-19T12:13:34Z
  date_updated: 2021-07-19T12:13:34Z
  file_id: '9691'
  file_name: 2021_PlantCell_Gao.pdf
  file_size: 10566921
  relation: main_file
  success: 1
file_date_updated: 2021-07-19T12:13:34Z
has_accepted_license: '1'
intvolume: '        33'
isi: 1
issue: '9'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
page: 2981–3003
pmid: 1
publication: Plant Cell
publication_identifier:
  eissn:
  - 1532-298x
  issn:
  - 1040-4651
publication_status: published
publisher: American Society of Plant Biologists
quality_controlled: '1'
status: public
title: GmPIN-dependent polar auxin transport is involved in soybean nodule development
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 33
year: '2021'
...
---
_id: '8607'
abstract:
- lang: eng
  text: Clathrin-mediated endocytosis (CME) and its core endocytic machinery are evolutionarily
    conserved across all eukaryotes. In mammals, the heterotetrameric adaptor protein
    complex-2 (AP-2) sorts plasma membrane (PM) cargoes into vesicles through the
    recognition of motifs based on tyrosine or di-leucine in their cytoplasmic tails.
    However, in plants, very little is known on how PM proteins are sorted for CME
    and whether similar motifs are required. In Arabidopsis thaliana, the brassinosteroid
    (BR) receptor, BR INSENSITIVE1 (BRI1), undergoes endocytosis that depends on clathrin
    and AP-2. Here we demonstrate that BRI1 binds directly to the medium AP-2 subunit,
    AP2M. The cytoplasmic domain of BRI1 contains five putative canonical surface-exposed
    tyrosine-based endocytic motifs. The tyrosine-to-phenylalanine substitution in
    Y898KAI reduced BRI1 internalization without affecting its kinase activity. Consistently,
    plants carrying the BRI1Y898F mutation were hypersensitive to BRs. Our study demonstrates
    that AP-2-dependent internalization of PM proteins via the recognition of functional
    tyrosine motifs also operates in plants.
article_processing_charge: No
article_type: original
author:
- first_name: D
  full_name: Liu, D
  last_name: Liu
- first_name: R
  full_name: Kumar, R
  last_name: Kumar
- first_name: Claus
  full_name: LAN, Claus
  last_name: LAN
- first_name: Alexander J
  full_name: Johnson, Alexander J
  id: 46A62C3A-F248-11E8-B48F-1D18A9856A87
  last_name: Johnson
  orcid: 0000-0002-2739-8843
- first_name: W
  full_name: Siao, W
  last_name: Siao
- first_name: I
  full_name: Vanhoutte, I
  last_name: Vanhoutte
- first_name: P
  full_name: Wang, P
  last_name: Wang
- first_name: KW
  full_name: Bender, KW
  last_name: Bender
- first_name: K
  full_name: Yperman, K
  last_name: Yperman
- first_name: S
  full_name: Martins, S
  last_name: Martins
- first_name: X
  full_name: Zhao, X
  last_name: Zhao
- first_name: G
  full_name: Vert, G
  last_name: Vert
- first_name: D
  full_name: Van Damme, D
  last_name: Van Damme
- first_name: Jiří
  full_name: Friml, Jiří
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: E
  full_name: Russinova, E
  last_name: Russinova
citation:
  ama: Liu D, Kumar R, LAN C, et al. Endocytosis of BRASSINOSTEROID INSENSITIVE1 is
    partly driven by a canonical tyrosine-based Motif. <i>Plant Cell</i>. 2020;32(11):3598-3612.
    doi:<a href="https://doi.org/10.1105/tpc.20.00384">10.1105/tpc.20.00384</a>
  apa: Liu, D., Kumar, R., LAN, C., Johnson, A. J., Siao, W., Vanhoutte, I., … Russinova,
    E. (2020). Endocytosis of BRASSINOSTEROID INSENSITIVE1 is partly driven by a canonical
    tyrosine-based Motif. <i>Plant Cell</i>. American Society of Plant Biologists.
    <a href="https://doi.org/10.1105/tpc.20.00384">https://doi.org/10.1105/tpc.20.00384</a>
  chicago: Liu, D, R Kumar, Claus LAN, Alexander J Johnson, W Siao, I Vanhoutte, P
    Wang, et al. “Endocytosis of BRASSINOSTEROID INSENSITIVE1 Is Partly Driven by
    a Canonical Tyrosine-Based Motif.” <i>Plant Cell</i>. American Society of Plant
    Biologists, 2020. <a href="https://doi.org/10.1105/tpc.20.00384">https://doi.org/10.1105/tpc.20.00384</a>.
  ieee: D. Liu <i>et al.</i>, “Endocytosis of BRASSINOSTEROID INSENSITIVE1 is partly
    driven by a canonical tyrosine-based Motif,” <i>Plant Cell</i>, vol. 32, no. 11.
    American Society of Plant Biologists, pp. 3598–3612, 2020.
  ista: Liu D, Kumar R, LAN C, Johnson AJ, Siao W, Vanhoutte I, Wang P, Bender K,
    Yperman K, Martins S, Zhao X, Vert G, Van Damme D, Friml J, Russinova E. 2020.
    Endocytosis of BRASSINOSTEROID INSENSITIVE1 is partly driven by a canonical tyrosine-based
    Motif. Plant Cell. 32(11), 3598–3612.
  mla: Liu, D., et al. “Endocytosis of BRASSINOSTEROID INSENSITIVE1 Is Partly Driven
    by a Canonical Tyrosine-Based Motif.” <i>Plant Cell</i>, vol. 32, no. 11, American
    Society of Plant Biologists, 2020, pp. 3598–612, doi:<a href="https://doi.org/10.1105/tpc.20.00384">10.1105/tpc.20.00384</a>.
  short: D. Liu, R. Kumar, C. LAN, A.J. Johnson, W. Siao, I. Vanhoutte, P. Wang, K.
    Bender, K. Yperman, S. Martins, X. Zhao, G. Vert, D. Van Damme, J. Friml, E. Russinova,
    Plant Cell 32 (2020) 3598–3612.
date_created: 2020-10-05T12:45:16Z
date_published: 2020-11-01T00:00:00Z
date_updated: 2023-09-05T12:21:32Z
day: '01'
department:
- _id: JiFr
doi: 10.1105/tpc.20.00384
ec_funded: 1
external_id:
  isi:
  - '000600226800021'
  pmid:
  - '32958564'
intvolume: '        32'
isi: 1
issue: '11'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://europepmc.org/article/MED/32958564
month: '11'
oa: 1
oa_version: Published Version
page: 3598-3612
pmid: 1
project:
- _id: 26538374-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: I03630
  name: Molecular mechanisms of endocytic cargo recognition in plants
- _id: 261099A6-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '742985'
  name: Tracing Evolution of Auxin Transport and Polarity in Plants
publication: Plant Cell
publication_identifier:
  eissn:
  - 1532-298x
  issn:
  - 1040-4651
publication_status: published
publisher: American Society of Plant Biologists
quality_controlled: '1'
scopus_import: '1'
status: public
title: Endocytosis of BRASSINOSTEROID INSENSITIVE1 is partly driven by a canonical
  tyrosine-based Motif
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 32
year: '2020'
...
